Mad2l2 (mitotic arrest deficient 2 like 2) - Rat Genome Database

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Gene: Mad2l2 (mitotic arrest deficient 2 like 2) Chinchilla lanigera
Analyze
Symbol: Mad2l2
Name: mitotic arrest deficient 2 like 2
RGD ID: 9043725
Description: ENCODES a protein that exhibits JUN kinase binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN actin filament organization (ortholog); DNA damage response, signal transduction resulting in transcription (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); chromosome 1p36 deletion syndrome (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: MAD2 mitotic arrest deficient-like 2; MAD2 mitotic arrest deficient-like 2 (yeast); mitotic spindle assembly checkpoint protein MAD2B
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554862,191,903 - 2,198,538 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554862,191,903 - 2,197,193 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mad2l2ChinchillaAsthenozoospermia  ISOMAD2L2 (Homo sapiens)8554872ClinVar Annotator: match by term: asthenozoospermiaClinVarPMID:25741868
Mad2l2ChinchillaCharcot-Marie-Tooth disease type 2  ISOMAD2L2 (Homo sapiens)8554872ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 2ClinVarPMID:28492532
Mad2l2Chinchillachromosome 1p36 deletion syndrome  ISOMAD2L2 (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 1p36 deletion syndromeClinVar 
Mad2l2ChinchillaFamilial Atrial Fibrillation 6  ISOMAD2L2 (Homo sapiens)8554872ClinVar Annotator: match by term: Atrial fibrillation more ...ClinVarPMID:28492532
Mad2l2ChinchillaFanconi anemia complementation group V  ISOMAD2L2 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 more ...
Mad2l2Chinchillaoligospermia  ISOMAD2L2 (Homo sapiens)8554872ClinVar Annotator: match by term: OligospermiaClinVarPMID:25741868
Mad2l2ChinchillaTeratozoospermia  ISOMAD2L2 (Homo sapiens)8554872ClinVar Annotator: match by term: TeratozoospermiaClinVarPMID:25741868
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mad2l2ChinchillaFanconi anemia complementation group V  ISOMAD2L2 (Homo sapiens)7240710 OMIM 


Biological Process
1 to 20 of 20 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mad2l2Chinchillaactin filament organization involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:19443654BHF-UCLPMID:19443654
Mad2l2ChinchillaDNA damage response, signal transduction resulting in transcription involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:17296730UniProtPMID:17296730
Mad2l2Chinchilladouble-strand break repair involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:15988022UniProtPMID:15988022
Mad2l2Chinchillaerror-prone translesion synthesis involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:24449906ComplexPortalPMID:24449906
Mad2l2Chinchillanegative regulation of canonical Wnt signaling pathway involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:19443654BHF-UCLPMID:19443654
Mad2l2Chinchillanegative regulation of cell-cell adhesion mediated by cadherin involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:19443654BHF-UCLPMID:19443654
Mad2l2Chinchillanegative regulation of double-strand break repair via homologous recombination involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:29656893UniProtPMID:29656893
Mad2l2Chinchillanegative regulation of epithelial to mesenchymal transition involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:19443654BHF-UCLPMID:19443654
Mad2l2Chinchillanegative regulation of protein catabolic process involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:11459826UniProtPMID:11459826
Mad2l2Chinchillanegative regulation of transcription by competitive promoter binding involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:19443654BHF-UCLPMID:19443654
Mad2l2Chinchillanegative regulation of transcription by RNA polymerase II involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:19443654BHF-UCLPMID:19443654
Mad2l2Chinchillanegative regulation of ubiquitin protein ligase activity involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:11459826UniProtPMID:11459826
Mad2l2Chinchillapositive regulation of DNA-templated transcription involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:17296730UniProtPMID:17296730
Mad2l2Chinchillapositive regulation of double-strand break repair via nonhomologous end joining involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:29656893UniProtPMID:29656893
Mad2l2Chinchillapositive regulation of epithelial to mesenchymal transition  ISOMad2l2 (Rattus norvegicus)9068941TGFb1RGDPMID:27488450 and REF_RGD_ID:152995505
Mad2l2Chinchillapositive regulation of extracellular matrix assembly  ISOMad2l2 (Rattus norvegicus)9068941 RGDPMID:27488450 and REF_RGD_ID:152995505
Mad2l2Chinchillapositive regulation of gene expression  ISOMad2l2 (Rattus norvegicus)9068941Fsp1 more ...RGDPMID:27488450 and REF_RGD_ID:152995505
Mad2l2Chinchillapositive regulation of isotype switching involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:29656893UniProtPMID:29656893
Mad2l2Chinchillapositive regulation of peptidyl-serine phosphorylation involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:17296730UniProtPMID:17296730
Mad2l2Chinchillaregulation of cell growth involved_inISOMAD2L2 (Homo sapiens)9068941 PMID:15988022UniProtPMID:15988022
1 to 20 of 20 rows

Cellular Component

  

Molecular Function
1 to 20 of 21 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mad2l2ChinchillaJUN kinase binding enablesISOMAD2L2 (Homo sapiens)9068941 PMID:17296730UniProtPMID:17296730
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:O606739068941 PMID:22828282IntActPMID:22828282
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:O14672 more ...9068941 PMID:10527948BHF-UCLPMID:10527948
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:A8K8P3-4 more ...9068941 PMID:25416956IntActPMID:25416956
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:P18011 more ...9068941 PMID:17719540IntActPMID:17719540
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q86V209068941 PMID:29789392UniProtPMID:29789392
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q6ZNX1 and UniProtKB:Q96JM39068941 PMID:29656893IntActPMID:29656893
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:O15499 more ...9068941 PMID:32296183IntActPMID:32296183
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q12834 and UniProtKB:Q9UM119068941 PMID:11459826UniProtPMID:11459826
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q96JM39068941 PMID:21063390 more ...IntActPMID:21063390 more ...
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q6ZNX1 and UniProtKB:Q86V209068941 PMID:29656893UniProtPMID:29656893
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q134439068941 PMID:10527948 and PMID:10531379IntActPMID:10527948 and PMID:10531379
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q7Z3K39068941 PMID:20850016UniProtPMID:20850016
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q9H8699068941 PMID:17541814UniProtPMID:17541814
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q9UBZ99068941 PMID:11485998UniProtPMID:11485998
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:P50570-29068941 PMID:32814053IntActPMID:32814053
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q2TB189068941 PMID:34354233UniProtPMID:34354233
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:P194199068941 PMID:17296730UniProtPMID:17296730
Mad2l2Chinchillaprotein binding enablesISOUniProtKB:Q927339068941 PMID:11717438UniProtPMID:11717438
Mad2l2ChinchillaRNA polymerase II-specific DNA-binding transcription factor binding enablesISOUniProtKB:Q9NQB09068941 PMID:19443654BHF-UCLPMID:19443654
1 to 20 of 21 rows


#
Reference Title
Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
PMID:30032202  



Mad2l2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554862,191,903 - 2,198,538 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554862,191,903 - 2,197,193 (+)NCBIChiLan1.0ChiLan1.0
MAD2L2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38111,674,480 - 11,691,830 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl111,657,230 - 11,691,811 (-)EnsemblGRCh38hg38GRCh38
GRCh37111,734,537 - 11,751,616 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36111,657,124 - 11,663,780 (-)NCBINCBI36Build 36hg18NCBI36
Build 34111,668,802 - 11,675,459NCBI
Celera110,846,601 - 10,863,739 (-)NCBICelera
Cytogenetic Map1p36.22NCBI
HuRef110,888,642 - 10,905,769 (-)NCBIHuRef
CHM1_1111,722,539 - 11,739,685 (-)NCBICHM1_1
T2T-CHM13v2.0111,218,548 - 11,235,917 (-)NCBIT2T-CHM13v2.0
Mad2l2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394148,214,615 - 148,230,161 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4148,214,841 - 148,230,156 (+)EnsemblGRCm39 Ensembl
GRCm384148,130,158 - 148,145,704 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4148,130,384 - 148,145,699 (+)EnsemblGRCm38mm10GRCm38
MGSCv374147,514,599 - 147,519,805 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364146,984,290 - 146,989,496 (+)NCBIMGSCv36mm8
Celera4150,401,823 - 150,407,027 (+)NCBICelera
Cytogenetic Map4E2NCBI
cM Map478.67NCBI
Mad2l2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85163,846,678 - 163,859,851 (+)NCBIGRCr8
mRatBN7.25158,563,545 - 158,576,698 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5158,563,567 - 158,576,693 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5161,288,790 - 161,293,471 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05163,110,607 - 163,115,262 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05163,066,954 - 163,071,609 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05164,943,183 - 164,956,255 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5164,950,917 - 164,956,255 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05168,601,233 - 168,614,293 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45165,218,362 - 165,222,828 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15165,228,549 - 165,233,014 (+)NCBI
Celera5156,851,516 - 156,855,981 (+)NCBICelera
Cytogenetic Map5q36NCBI
MAD2L2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21216,532,737 - 216,550,231 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11215,178,858 - 215,196,364 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0110,436,532 - 10,454,023 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1111,654,963 - 11,671,364 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl111,654,963 - 11,661,526 (-)Ensemblpanpan1.1panPan2
MAD2L2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1284,539,724 - 84,549,402 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl284,545,226 - 84,549,356 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha281,076,962 - 81,081,699 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0285,207,730 - 85,212,516 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl285,201,068 - 85,212,508 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1281,956,536 - 81,961,266 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0282,957,166 - 82,961,884 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0284,020,037 - 84,024,757 (+)NCBIUU_Cfam_GSD_1.0
Mad2l2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505834,713,906 - 34,718,120 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936474538,625 - 542,901 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936474538,703 - 542,901 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAD2L2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl671,773,154 - 71,786,517 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1671,773,680 - 71,779,192 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2665,692,635 - 65,698,160 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAD2L2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120120,099,928 - 120,115,954 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20120,110,269 - 120,116,083 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605423,977,591 - 23,984,254 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mad2l2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248181,282,082 - 1,286,997 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248181,274,553 - 1,286,750 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.





RefSeq Transcripts XM_005403996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AGCD01058994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GBDI01170196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCLAT00000006248   ⟹   ENSCLAP00000006145
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554862,191,903 - 2,198,538 (+)Ensembl
RefSeq Acc Id: XM_005403996   ⟹   XP_005404053
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554862,191,903 - 2,197,193 (+)NCBI
Sequence:
Protein RefSeqs XP_005404053 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000006145
  ENSCLAP00000006145.1
RefSeq Acc Id: XP_005404053   ⟸   XM_005403996
- UniProtKB: A0A8C2V1A3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000006145   ⟸   ENSCLAT00000006248
HORMA



1 to 14 of 14 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCLAG00000004348 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000006248 ENTREZGENE
  ENSCLAT00000006248.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.900.10 UniProtKB/TrEMBL
InterPro HORMA_dom UniProtKB/TrEMBL
  HORMA_dom_sf UniProtKB/TrEMBL
  Mad2-like UniProtKB/TrEMBL
NCBI Gene Mad2l2 ENTREZGENE
PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2B UniProtKB/TrEMBL
  PTHR11842 UniProtKB/TrEMBL
Pfam HORMA UniProtKB/TrEMBL
PROSITE HORMA UniProtKB/TrEMBL
Superfamily-SCOP SSF56019 UniProtKB/TrEMBL
UniProt A0A8C2V1A3 ENTREZGENE, UniProtKB/TrEMBL
1 to 14 of 14 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-02-28 Mad2l2  mitotic arrest deficient 2 like 2    MAD2 mitotic arrest deficient-like 2 (yeast)  Symbol and/or name change 5135510 APPROVED