Gsn (gelsolin) - Rat Genome Database

Name: Gsn
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: Gsn (gelsolin) Chinchilla lanigera

Analyze

Symbol:

Gsn

Name:

gelsolin

RGD ID:

8767145

Description:

ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament capping (ortholog); actin filament depolymerization (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Liver Failure (ortholog); amyloidosis (ortholog); FOUND IN actin cap (ortholog); actin cytoskeleton (ortholog); apical ectoplasmic specialization (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

plasma gelsolin

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GSN (gelsolin)	NCBI	Ortholog
Mus musculus (house mouse):	Gsn (gelsolin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Gsn (gelsolin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GSN (gelsolin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GSN (gelsolin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Gsn (gelsolin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GSN (gelsolin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GSN (gelsolin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Gsn (gelsolin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	6,682,058 - 6,733,361 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	6,682,202 - 6,733,361 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Coronary Syndrome (ISO)

Acute Liver Failure (ISO)

amyloidosis (ISO)

Aortic Calcification (ISO)

Arterial Thrombosis (ISO)

atrial fibrillation (ISO)

Basal Ganglia Hemorrhage (ISO)

Brain Hypoxia-Ischemia (ISO)

Brain Injuries (ISO)

Cardiomegaly (ISO)

cerebral infarction (ISO)

Chemical and Drug Induced Liver Injury (ISO)

Experimental Liver Cirrhosis (ISO)

Experimental Mammary Neoplasms (ISO)

Familial Amyloidosis (ISO)

Finnish type amyloidosis (ISO)

gas gangrene (ISO)

genetic disease (ISO)

hypothyroidism (ISO)

lung disease (ISO)

Mesothelioma (ISO)

Metabolic Syndrome (ISO)

middle cerebral artery infarction (ISO)

myocardial infarction (ISO)

osteoporosis (ISO)

Paratuberculosis (ISO)

Postoperative Atrial Fibrillation (ISO)

pre-eclampsia (ISO)

Preterm Intraventricular Hemorrhage (ISO)

pulmonary artery disease (ISO)

rheumatic myocarditis (ISO)

Sepsis (ISO)

Subarachnoid Hemorrhage (ISO)

Thromboembolism (ISO)

Ventricular Remodeling (ISO)

Weight Gain (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (ISO)

actin filament capping (ISO)

actin filament depolymerization (ISO)

actin filament organization (ISO)

actin filament polymerization (ISO)

actin filament severing (ISO)

actin polymerization or depolymerization (ISO)

amyloid fibril formation (ISO)

cardiac muscle cell contraction (ISO)

cellular response to cadmium ion (ISO)

cellular response to type II interferon (ISO)

cilium assembly (ISO)

extracellular matrix disassembly (ISO)

hepatocyte apoptotic process (ISO)

oligodendrocyte development (ISO)

phagocytosis, engulfment (ISO)

positive regulation of actin nucleation (ISO)

positive regulation of cardiac muscle hypertrophy (ISO)

positive regulation of cysteine-type endopeptidase activity (ISO)

positive regulation of gene expression (ISO)

positive regulation of keratinocyte apoptotic process (ISO)

positive regulation of p38MAPK cascade (ISO)

positive regulation of protein processing in phagocytic vesicle (ISO)

protein destabilization (ISO)

regulation of establishment of T cell polarity (ISO)

regulation of plasma membrane raft polarization (ISO)

regulation of podosome assembly (ISO)

regulation of receptor clustering (ISO)

relaxation of cardiac muscle (ISO)

renal protein absorption (ISO)

response to ethanol (ISO)

response to folic acid (ISO)

response to muscle stretch (ISO)

sequestering of actin monomers (ISO)

striated muscle atrophy (ISO)

tissue regeneration (ISO)

vesicle-mediated transport (ISO)

Cellular Component

actin cap (ISO)

actin cytoskeleton (ISO)

apical ectoplasmic specialization (ISO)

basal ectoplasmic specialization (ISO)

cortical actin cytoskeleton (ISO)

cytoplasm (ISO)

cytosol (ISO)

extracellular region (ISO)

extracellular space (ISO)

focal adhesion (ISO)

glial filament (ISO)

lamellipodium (ISO)

myelin sheath (ISO)

nucleus (ISO)

perinuclear region of cytoplasm (ISO)

phagocytic vesicle (ISO)

plasma membrane (ISO)

podosome (ISO)

protein-containing complex (ISO)

ruffle (ISO)

sarcoplasm (ISO)

Molecular Function

actin binding (ISO)

calcium ion binding (ISO)

myosin II binding (ISO)

phosphatidylinositol 3-kinase catalytic subunit binding (ISO)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

epidermal growth factor/neuregulin signaling pathway (ISO)

N-cadherin signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Gsn
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	6,682,058 - 6,733,361 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	6,682,202 - 6,733,361 (-)	NCBI	ChiLan1.0	ChiLan1.0

GSN
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	121,201,483 - 121,332,842 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	121,207,794 - 121,332,843 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	123,963,761 - 124,095,120 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	123,070,201 - 123,134,941 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	121,109,960 - 121,174,674	NCBI
Celera	9	94,678,898 - 94,743,628 (+)	NCBI		Celera
Cytogenetic Map	9	q33.2	NCBI
HuRef	9	93,648,171 - 93,712,883 (+)	NCBI		HuRef
CHM1_1	9	124,177,269 - 124,242,004 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	133,397,510 - 133,528,852 (+)	NCBI		T2T-CHM13v2.0

Gsn
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	35,146,371 - 35,197,914 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	35,146,392 - 35,197,904 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	35,256,359 - 35,307,902 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	35,256,380 - 35,307,892 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	35,137,960 - 35,163,412 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	35,104,449 - 35,129,901 (+)	NCBI		MGSCv36	mm8
Celera	2	34,977,113 - 35,002,613 (+)	NCBI		Celera
Cytogenetic Map	2	B	NCBI
cM Map	2	23.5	NCBI

Gsn
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	38,982,605 - 39,035,849 (+)	NCBI		GRCr8
mRatBN7.2	3	18,585,166 - 18,638,404 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	18,585,172 - 18,638,402 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	21,683,799 - 21,710,538 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	30,268,837 - 30,295,574 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	28,522,714 - 28,549,446 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	14,456,106 - 14,508,922 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	14,467,330 - 14,508,911 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	19,773,655 - 19,826,463 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	14,360,245 - 14,386,313 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	14,256,616 - 14,282,685 (+)	NCBI
Celera	3	13,325,045 - 13,351,501 (+)	NCBI		Celera
Cytogenetic Map	3	p11	NCBI

GSN
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	18,011,809 - 18,076,682 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	18,014,159 - 18,079,040 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	92,413,819 - 92,460,483 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	120,741,148 - 120,805,831 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	120,741,148 - 120,805,831 (+)	Ensembl	panpan1.1		panPan2

GSN
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	74,248,227 - 74,268,129 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	74,233,457 - 74,268,129 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	72,637,556 - 72,678,974 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	75,364,194 - 75,405,704 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	75,364,181 - 75,405,705 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	73,871,291 - 73,912,586 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	73,902,056 - 73,943,469 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	74,663,262 - 74,683,140 (+)	NCBI		UU_Cfam_GSD_1.0

Gsn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	189,981,162 - 190,034,252 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	9,764,944 - 9,802,841 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	9,749,755 - 9,802,787 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GSN
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	261,307,008 - 261,372,848 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	261,295,711 - 261,372,848 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	293,381,825 - 293,388,559 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GSN
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	18,253,079 - 18,317,285 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	18,253,324 - 18,285,938 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666035	24,700,374 - 24,764,693 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gsn
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	13,943,888 - 13,969,905 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	13,943,680 - 14,004,660 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005382570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013513254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013513255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01019862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY533218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01002417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000013941 ⟹ ENSCLAP00000013786

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955419	6,682,058 - 6,733,361 (-)	Ensembl

Ensembl Acc Id:

ENSCLAT00000013942 ⟹ ENSCLAP00000013787

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955419	6,682,058 - 6,706,604 (-)	Ensembl

Ensembl Acc Id:

ENSCLAT00000013943 ⟹ ENSCLAP00000013788

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955419	6,682,441 - 6,706,433 (-)	Ensembl

RefSeq Acc Id:

XM_005382570 ⟹ XP_005382627

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955419	6,682,202 - 6,706,486 (-)	NCBI

Sequence:

show sequence

GGACTGGGCGAGGGTGCCGACCGGGTCCTGCGCCCGCCCGCCGCGTCGTCGCCATGGCCCGCGC
GCTGCTCCTTGCCCTGAGCGCGCTGTCGCTGTCGCTGTCCCCGGCCCGTGCGGCCGCCGCATCG
CGGGGGGTAACCCGGACAGGGGCCGCCCAGGGGCAGGCGCCCCAGGCGCGGCCCGGCAGCATGG
TGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGCAGCCTGGACTGCAGATCTGGCGTGTGGA
GAAGTTTGACCTGGTCCCCGTTCCGCCCAACCTCTACGGAGACTTCTTCACGGGCGACGCCTAT
GTCATCTTGAAGACGGTGCAGCTGCGGAATGGGAATCTGCAGTACGACCTCCACTACTGGCTGG
GCAACGAGTGCAGCCAGGATGAGAGCGGGGCAGCCGCCATCTTCACCGTGCAGCTGGATGACTA
CCTGAACGGCAGGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTTCCTCGGC
TACTTCAAGTCTGGCCTGAAGTACAAGAAAGGAGGCGTGGCGTCGGGATTCAAGCACGTGGTTC
CCAATGAAGTGCAGGTGCAGAGACTCTTCCAGGTCAAAGGGCGGCGTGTGGTCCGGGCCACGGA
GGTGCCTGTGTCCTGGGACAGCTTCAACAATGGTGACTGCTTCATCCTGGACCTGGGCAATAAC
ATCTACCAGTGGTGTGGTTCCAACAGCAACCGATTCGAAAAACTTAAGGCCACACAGGTGTCCA
AGGGCATCCGGGACAACGAGCGGAGTGGCCGGGCCCAGGTGTACGTGTCAGAGGAGGGCTCCGA
GCCGGAGGCAATGCTCCAGGTGCTGGGCCCCAAGCCGGCTCTGCCTGACGGTGCCGAGGACACA
GCCAAGGAGGATGCGGCCAACCGCAAGCTGGCCAAGCTCTACAAGGTCTCCAATGGCGTGGGCA
GCATGACGGTCTCCCTCGTGGCTGACGAGAACCCCTTCGCCCAGGGGGCCCTCAGATCAGAGGA
CTGCTTTATCCTGGACCACGGCAGGGACGGGAAAATCTTTGTCTGGAAAGGTAAGCAGGCCAAC
ACGGAGGAGCGGAAGGCTGCCCTGAAAACGGCCTCCGACTTCATCTCCAAGATGAACTACCCCA
AGCAGACCCAGGTTTCAGTCCTTCCCGAGGGCGGCGAGACCCCGCTCTTCAAGCAGTTCTTCAA
GAACTGGCGGGACCCAGACCAGACCGACGGCCCGGGCCTGGCCTACCTCTCCAGCCACATTGCC
AACGTGGAGCGTGTGCCCTTCGACGCCGCCACCCTGCACACCTCCACCGCCATGGCTGCCCAGC
ATGGCATGGATGACGATGGCACTGGGCAGAAGCAGATCTGGAGAATCGAAGGCTCCAACAAGGT
GCCTGTGGATCCTGCCTCGTATGGGCAGTTCTACGGAGGTGACAGCTACATCATTCTGTACAAC
TATCGCCATGGCGGCCGCCAGGGGCAGATCATCTACAACTGGCAGGGAGCCCAGTCTACCCAGG
ATGAGGTCGCCGCATCTGCCATCCTGACGGCCCAGCTGGATGAGGAGCTCGGGGGTACCCCTGT
CCAGAGCCGAGTGGTCCAAGGCAAGGAGCCTGCCCACCTCATGAGCCTGTTTGGCGGGAAGCCC
ATGATCATCTACAAGGGGGGCACCTCCCGCGAGGGCGGGCAGACGGCCCCCGCCAGCACCCGCC
TCTTCCAGGTCCGGGCCAGCAGCTCTGGAGCCACACGGGCCGTTGAGATCATGCCTAAGGCTGG
CGCTCTGAACTCCAACGATGCCTTTGTGCTGAAGACACCCTCGGCAGCCTACCTGTGGGTGGGC
ACGGGAGCCAGCGACGCGGAGAAGACAGGGGCCCAGGAGCTGCTGCGGGTGCTGAAGGCCCAGC
CGGTGCAGGTGGCTGAAGGCAGCGAGCCAGACAGCTTCTGGGAGGCCCTGGGCGGGAAGGCCGC
CTACCGCACATCTCCACGGCTGAAGGACAAGAAGATGGACGCTCACCCTCCTCGCCTTTTTGCC
TGCTCCAACAAGATTGGACGTTTTGTGATCGAAGAGGTTCCTGGCGAGCTCATGCAGGAAGACC
TGGCTACCGATGATGTCATGCTCCTGGACACCTGGGACCAGGTCTTCGTCTGGGTTGGAAAGGA
TTCCCAAGAAGAGGAGAAGACAGAAGCCTTGACCTCTGCTAAGCGATACATCGAGACGGACCCA
GCTAATCGAGACAGACGGACCCTCATCACTGTGGTGAAGCAAGGCTTTGAGCCTCCTTCTTTCG
TGGGCTGGTTCCTTGGCTGGGATGATGACTACTGGTCTGTGGACCCCTTGGACAGGGCCCTGGC
TGAGCTGGCTGCCTAAGGAAGGGCAAGACCCACCACTGTCACCCATCAGTGCCTTTTAGAACTG
TCCATCTCCCAAAGAGATTTGCGGTGAGCAGGGCAACTCTGGTGCGTGCGTGTGTGCGTGCGTG
CATGTGTGTGTATGTGTGTGTTTTATAGTAGCCAAAAACAACCCTACCAAAATTCAGGGTCCTC
GCAAACTTGTCTCAAATACCCGTGCTTTGGAAATTAAATTCAATAAAAGCTTTTTGAAGTGTG

hide sequence

RefSeq Acc Id:

XM_013513254 ⟹ XP_013368708

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955419	6,682,202 - 6,733,361 (-)	NCBI

Sequence:

show sequence

AGCGGCTCCCGCCTGCGCCCCGCCCCTCGGCCCCCGCCCCGTGGCCCGGAACCAGCTGAGCGCA
GCTGGACCCAGCAGCCGCCGTCGCCAGCCCCGCTGCAGCAGGTGCTGCCGACTCCCCTTGTGCA
GTGGTTTGGCCGAGGTGGTTGCAGAACCTCCCCTGGAGCCTCTGTCTTCTCGTTCGCAGCCCTG
AGAGTTCTTGCAGATACAGCGCTAGGAAAAGGGGAGTAATTGAGGTCTAGAATGGAAAAACTGT
TTTGTTGCTTTCCCGGCAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGCAGCC
TGGACTGCAGATCTGGCGTGTGGAGAAGTTTGACCTGGTCCCCGTTCCGCCCAACCTCTACGGA
GACTTCTTCACGGGCGACGCCTATGTCATCTTGAAGACGGTGCAGCTGCGGAATGGGAATCTGC
AGTACGACCTCCACTACTGGCTGGGCAACGAGTGCAGCCAGGATGAGAGCGGGGCAGCCGCCAT
CTTCACCGTGCAGCTGGATGACTACCTGAACGGCAGGGCCGTGCAGCACCGTGAGGTCCAGGGC
TTCGAGTCGGCCACCTTCCTCGGCTACTTCAAGTCTGGCCTGAAGTACAAGAAAGGAGGCGTGG
CGTCGGGATTCAAGCACGTGGTTCCCAATGAAGTGCAGGTGCAGAGACTCTTCCAGGTCAAAGG
GCGGCGTGTGGTCCGGGCCACGGAGGTGCCTGTGTCCTGGGACAGCTTCAACAATGGTGACTGC
TTCATCCTGGACCTGGGCAATAACATCTACCAGTGGTGTGGTTCCAACAGCAACCGATTCGAAA
AACTTAAGGCCACACAGGTGTCCAAGGGCATCCGGGACAACGAGCGGAGTGGCCGGGCCCAGGT
GTACGTGTCAGAGGAGGGCTCCGAGCCGGAGGCAATGCTCCAGGTGCTGGGCCCCAAGCCGGCT
CTGCCTGACGGTGCCGAGGACACAGCCAAGGAGGATGCGGCCAACCGCAAGCTGGCCAAGCTCT
ACAAGGTCTCCAATGGCGTGGGCAGCATGACGGTCTCCCTCGTGGCTGACGAGAACCCCTTCGC
CCAGGGGGCCCTCAGATCAGAGGACTGCTTTATCCTGGACCACGGCAGGGACGGGAAAATCTTT
GTCTGGAAAGGTAAGCAGGCCAACACGGAGGAGCGGAAGGCTGCCCTGAAAACGGCCTCCGACT
TCATCTCCAAGATGAACTACCCCAAGCAGACCCAGGTTTCAGTCCTTCCCGAGGGCGGCGAGAC
CCCGCTCTTCAAGCAGTTCTTCAAGAACTGGCGGGACCCAGACCAGACCGACGGCCCGGGCCTG
GCCTACCTCTCCAGCCACATTGCCAACGTGGAGCGTGTGCCCTTCGACGCCGCCACCCTGCACA
CCTCCACCGCCATGGCTGCCCAGCATGGCATGGATGACGATGGCACTGGGCAGAAGCAGATCTG
GAGAATCGAAGGCTCCAACAAGGTGCCTGTGGATCCTGCCTCGTATGGGCAGTTCTACGGAGGT
GACAGCTACATCATTCTGTACAACTATCGCCATGGCGGCCGCCAGGGGCAGATCATCTACAACT
GGCAGGGAGCCCAGTCTACCCAGGATGAGGTCGCCGCATCTGCCATCCTGACGGCCCAGCTGGA
TGAGGAGCTCGGGGGTACCCCTGTCCAGAGCCGAGTGGTCCAAGGCAAGGAGCCTGCCCACCTC
ATGAGCCTGTTTGGCGGGAAGCCCATGATCATCTACAAGGGGGGCACCTCCCGCGAGGGCGGGC
AGACGGCCCCCGCCAGCACCCGCCTCTTCCAGGTCCGGGCCAGCAGCTCTGGAGCCACACGGGC
CGTTGAGATCATGCCTAAGGCTGGCGCTCTGAACTCCAACGATGCCTTTGTGCTGAAGACACCC
TCGGCAGCCTACCTGTGGGTGGGCACGGGAGCCAGCGACGCGGAGAAGACAGGGGCCCAGGAGC
TGCTGCGGGTGCTGAAGGCCCAGCCGGTGCAGGTGGCTGAAGGCAGCGAGCCAGACAGCTTCTG
GGAGGCCCTGGGCGGGAAGGCCGCCTACCGCACATCTCCACGGCTGAAGGACAAGAAGATGGAC
GCTCACCCTCCTCGCCTTTTTGCCTGCTCCAACAAGATTGGACGTTTTGTGATCGAAGAGGTTC
CTGGCGAGCTCATGCAGGAAGACCTGGCTACCGATGATGTCATGCTCCTGGACACCTGGGACCA
GGTCTTCGTCTGGGTTGGAAAGGATTCCCAAGAAGAGGAGAAGACAGAAGCCTTGACCTCTGCT
AAGCGATACATCGAGACGGACCCAGCTAATCGAGACAGACGGACCCTCATCACTGTGGTGAAGC
AAGGCTTTGAGCCTCCTTCTTTCGTGGGCTGGTTCCTTGGCTGGGATGATGACTACTGGTCTGT
GGACCCCTTGGACAGGGCCCTGGCTGAGCTGGCTGCCTAAGGAAGGGCAAGACCCACCACTGTC
ACCCATCAGTGCCTTTTAGAACTGTCCATCTCCCAAAGAGATTTGCGGTGAGCAGGGCAACTCT
GGTGCGTGCGTGTGTGCGTGCGTGCATGTGTGTGTATGTGTGTGTTTTATAGTAGCCAAAAACA
ACCCTACCAAAATTCAGGGTCCTCGCAAACTTGTCTCAAATACCCGTGCTTTGGAAATTAAATT
CAATAAAAGCTTTTTGAAGTGTG

hide sequence

RefSeq Acc Id:

XM_013513255 ⟹ XP_013368709

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955419	6,682,202 - 6,733,361 (-)	NCBI

Sequence:

show sequence

AGCGGCTCCCGCCTGCGCCCCGCCCCTCGGCCCCCGCCCCGTGGCCCGGAACCAGCTGAGCGCA
GCTGGACCCAGCAGCCGCCGTCGCCAGCCCCGCTGCAGCAGGTGCTGCCGACTCCCCTTGTGCA
GTGGTTTGGCCGAGGTGGTTGCAGAACCTCCCCTGGAGCCTCTGTCTTCTCGTTCGCAGCCCTG
AGAGCCCGGCAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGAAGCAGCCTGGACTG
CAGATCTGGCGTGTGGAGAAGTTTGACCTGGTCCCCGTTCCGCCCAACCTCTACGGAGACTTCT
TCACGGGCGACGCCTATGTCATCTTGAAGACGGTGCAGCTGCGGAATGGGAATCTGCAGTACGA
CCTCCACTACTGGCTGGGCAACGAGTGCAGCCAGGATGAGAGCGGGGCAGCCGCCATCTTCACC
GTGCAGCTGGATGACTACCTGAACGGCAGGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGT
CGGCCACCTTCCTCGGCTACTTCAAGTCTGGCCTGAAGTACAAGAAAGGAGGCGTGGCGTCGGG
ATTCAAGCACGTGGTTCCCAATGAAGTGCAGGTGCAGAGACTCTTCCAGGTCAAAGGGCGGCGT
GTGGTCCGGGCCACGGAGGTGCCTGTGTCCTGGGACAGCTTCAACAATGGTGACTGCTTCATCC
TGGACCTGGGCAATAACATCTACCAGTGGTGTGGTTCCAACAGCAACCGATTCGAAAAACTTAA
GGCCACACAGGTGTCCAAGGGCATCCGGGACAACGAGCGGAGTGGCCGGGCCCAGGTGTACGTG
TCAGAGGAGGGCTCCGAGCCGGAGGCAATGCTCCAGGTGCTGGGCCCCAAGCCGGCTCTGCCTG
ACGGTGCCGAGGACACAGCCAAGGAGGATGCGGCCAACCGCAAGCTGGCCAAGCTCTACAAGGT
CTCCAATGGCGTGGGCAGCATGACGGTCTCCCTCGTGGCTGACGAGAACCCCTTCGCCCAGGGG
GCCCTCAGATCAGAGGACTGCTTTATCCTGGACCACGGCAGGGACGGGAAAATCTTTGTCTGGA
AAGGTAAGCAGGCCAACACGGAGGAGCGGAAGGCTGCCCTGAAAACGGCCTCCGACTTCATCTC
CAAGATGAACTACCCCAAGCAGACCCAGGTTTCAGTCCTTCCCGAGGGCGGCGAGACCCCGCTC
TTCAAGCAGTTCTTCAAGAACTGGCGGGACCCAGACCAGACCGACGGCCCGGGCCTGGCCTACC
TCTCCAGCCACATTGCCAACGTGGAGCGTGTGCCCTTCGACGCCGCCACCCTGCACACCTCCAC
CGCCATGGCTGCCCAGCATGGCATGGATGACGATGGCACTGGGCAGAAGCAGATCTGGAGAATC
GAAGGCTCCAACAAGGTGCCTGTGGATCCTGCCTCGTATGGGCAGTTCTACGGAGGTGACAGCT
ACATCATTCTGTACAACTATCGCCATGGCGGCCGCCAGGGGCAGATCATCTACAACTGGCAGGG
AGCCCAGTCTACCCAGGATGAGGTCGCCGCATCTGCCATCCTGACGGCCCAGCTGGATGAGGAG
CTCGGGGGTACCCCTGTCCAGAGCCGAGTGGTCCAAGGCAAGGAGCCTGCCCACCTCATGAGCC
TGTTTGGCGGGAAGCCCATGATCATCTACAAGGGGGGCACCTCCCGCGAGGGCGGGCAGACGGC
CCCCGCCAGCACCCGCCTCTTCCAGGTCCGGGCCAGCAGCTCTGGAGCCACACGGGCCGTTGAG
ATCATGCCTAAGGCTGGCGCTCTGAACTCCAACGATGCCTTTGTGCTGAAGACACCCTCGGCAG
CCTACCTGTGGGTGGGCACGGGAGCCAGCGACGCGGAGAAGACAGGGGCCCAGGAGCTGCTGCG
GGTGCTGAAGGCCCAGCCGGTGCAGGTGGCTGAAGGCAGCGAGCCAGACAGCTTCTGGGAGGCC
CTGGGCGGGAAGGCCGCCTACCGCACATCTCCACGGCTGAAGGACAAGAAGATGGACGCTCACC
CTCCTCGCCTTTTTGCCTGCTCCAACAAGATTGGACGTTTTGTGATCGAAGAGGTTCCTGGCGA
GCTCATGCAGGAAGACCTGGCTACCGATGATGTCATGCTCCTGGACACCTGGGACCAGGTCTTC
GTCTGGGTTGGAAAGGATTCCCAAGAAGAGGAGAAGACAGAAGCCTTGACCTCTGCTAAGCGAT
ACATCGAGACGGACCCAGCTAATCGAGACAGACGGACCCTCATCACTGTGGTGAAGCAAGGCTT
TGAGCCTCCTTCTTTCGTGGGCTGGTTCCTTGGCTGGGATGATGACTACTGGTCTGTGGACCCC
TTGGACAGGGCCCTGGCTGAGCTGGCTGCCTAAGGAAGGGCAAGACCCACCACTGTCACCCATC
AGTGCCTTTTAGAACTGTCCATCTCCCAAAGAGATTTGCGGTGAGCAGGGCAACTCTGGTGCGT
GCGTGTGTGCGTGCGTGCATGTGTGTGTATGTGTGTGTTTTATAGTAGCCAAAAACAACCCTAC
CAAAATTCAGGGTCCTCGCAAACTTGTCTCAAATACCCGTGCTTTGGAAATTAAATTCAATAAA
AGCTTTTTGAAGTGTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005382627	(Get FASTA)	NCBI Sequence Viewer
	XP_013368708	(Get FASTA)	NCBI Sequence Viewer
	XP_013368709	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAS59421	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000013786.1
	ENSCLAP00000013787
	ENSCLAP00000013787.1
	ENSCLAP00000013788
	ENSCLAP00000013788.1

RefSeq Acc Id:	XP_005382627 ⟸ XM_005382570
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VD06 (UniProtKB/TrEMBL)
- Sequence:	show sequence MARALLLALSALSLSLSPARAAAASRGVTRTGAAQGQAPQARPGSMVVEHPEFLKAGKQPGLQI WRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQ LDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVVPNEVQVQRLFQVKGRRVV RATEVPVSWDSFNNGDCFILDLGNNIYQWCGSNSNRFEKLKATQVSKGIRDNERSGRAQVYVSE EGSEPEAMLQVLGPKPALPDGAEDTAKEDAANRKLAKLYKVSNGVGSMTVSLVADENPFAQGAL RSEDCFILDHGRDGKIFVWKGKQANTEERKAALKTASDFISKMNYPKQTQVSVLPEGGETPLFK QFFKNWRDPDQTDGPGLAYLSSHIANVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRIEG SNKVPVDPASYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELG GTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQTAPASTRLFQVRASSSGATRAVEIM PKAGALNSNDAFVLKTPSAAYLWVGTGASDAEKTGAQELLRVLKAQPVQVAEGSEPDSFWEALG GKAAYRTSPRLKDKKMDAHPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVW VGKDSQEEEKTEALTSAKRYIETDPANRDRRTLITVVKQGFEPPSFVGWFLGWDDDYWSVDPLD RALAELAA hide sequence

RefSeq Acc Id:	XP_013368709 ⟸ XM_013513255
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2VD38 (UniProtKB/TrEMBL), A0A8C2VD06 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVVEHPEFLKAGKQPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYW LGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHV VPNEVQVQRLFQVKGRRVVRATEVPVSWDSFNNGDCFILDLGNNIYQWCGSNSNRFEKLKATQV SKGIRDNERSGRAQVYVSEEGSEPEAMLQVLGPKPALPDGAEDTAKEDAANRKLAKLYKVSNGV GSMTVSLVADENPFAQGALRSEDCFILDHGRDGKIFVWKGKQANTEERKAALKTASDFISKMNY PKQTQVSVLPEGGETPLFKQFFKNWRDPDQTDGPGLAYLSSHIANVERVPFDAATLHTSTAMAA QHGMDDDGTGQKQIWRIEGSNKVPVDPASYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQST QDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQTAPAST RLFQVRASSSGATRAVEIMPKAGALNSNDAFVLKTPSAAYLWVGTGASDAEKTGAQELLRVLKA QPVQVAEGSEPDSFWEALGGKAAYRTSPRLKDKKMDAHPPRLFACSNKIGRFVIEEVPGELMQE DLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTLITVVKQGFEPPS FVGWFLGWDDDYWSVDPLDRALAELAA hide sequence

RefSeq Acc Id:	XP_013368708 ⟸ XM_013513254
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2VD06 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEKLFCCFPGSMVVEHPEFLKAGKQPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLR NGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYK KGGVASGFKHVVPNEVQVQRLFQVKGRRVVRATEVPVSWDSFNNGDCFILDLGNNIYQWCGSNS NRFEKLKATQVSKGIRDNERSGRAQVYVSEEGSEPEAMLQVLGPKPALPDGAEDTAKEDAANRK LAKLYKVSNGVGSMTVSLVADENPFAQGALRSEDCFILDHGRDGKIFVWKGKQANTEERKAALK TASDFISKMNYPKQTQVSVLPEGGETPLFKQFFKNWRDPDQTDGPGLAYLSSHIANVERVPFDA ATLHTSTAMAAQHGMDDDGTGQKQIWRIEGSNKVPVDPASYGQFYGGDSYIILYNYRHGGRQGQ IIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTS REGGQTAPASTRLFQVRASSSGATRAVEIMPKAGALNSNDAFVLKTPSAAYLWVGTGASDAEKT GAQELLRVLKAQPVQVAEGSEPDSFWEALGGKAAYRTSPRLKDKKMDAHPPRLFACSNKIGRFV IEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTLI TVVKQGFEPPSFVGWFLGWDDDYWSVDPLDRALAELAA hide sequence

Ensembl Acc Id:

ENSCLAP00000013786 ⟸ ENSCLAT00000013941

Ensembl Acc Id:

ENSCLAP00000013787 ⟸ ENSCLAT00000013942

Ensembl Acc Id:

ENSCLAP00000013788 ⟸ ENSCLAT00000013943

Protein Domains

Gelsolin-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000009527	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000013941.1	UniProtKB/TrEMBL
	ENSCLAT00000013942	ENTREZGENE
	ENSCLAT00000013942.1	UniProtKB/TrEMBL
	ENSCLAT00000013943	ENTREZGENE
	ENSCLAT00000013943.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.20.10	UniProtKB/TrEMBL
InterPro	ADF-H/Gelsolin-like_dom_sf	UniProtKB/TrEMBL
	Gelsolin-like_dom	UniProtKB/TrEMBL
	Villin/Gelsolin	UniProtKB/TrEMBL
NCBI Gene	Gsn	ENTREZGENE
PANTHER	GELSOLIN	UniProtKB/TrEMBL
	PTHR11977	UniProtKB/TrEMBL
Pfam	Gelsolin	UniProtKB/TrEMBL
PRINTS	GELSOLIN	UniProtKB/TrEMBL
SMART	GEL	UniProtKB/TrEMBL
Superfamily-SCOP	Actin depolymerizing proteins	UniProtKB/TrEMBL
UniProt	A0A8C2VD06	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2VD37_CHILA	UniProtKB/TrEMBL
	A0A8C2VD38	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)