Fzd7 (frizzled class receptor 7) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Fzd7 (frizzled class receptor 7) Chinchilla lanigera
Analyze
Symbol: Fzd7
Name: frizzled class receptor 7
RGD ID: 9039575
Description: ENCODES a protein that exhibits frizzled binding (ortholog); PDZ domain binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); mesenchymal to epithelial transition (ortholog); negative regulation of cardiac muscle cell differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; Wnt signaling pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH nephroblastoma (ortholog); Neurodevelopmental Disorders (ortholog); Pulmonary Arterial Hypertension (ortholog); FOUND IN intracellular membrane-bounded organelle (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: frizzled family receptor 7; frizzled-7
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545712,731,279 - 12,732,979 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545712,729,277 - 12,733,057 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Fzd7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545712,731,279 - 12,732,979 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545712,729,277 - 12,733,057 (-)NCBIChiLan1.0ChiLan1.0
FZD7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2202,033,855 - 202,038,441 (+)EnsemblGRCh38hg38GRCh38
GRCh382202,033,855 - 202,038,441 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372202,898,578 - 202,903,164 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362202,607,555 - 202,611,405 (+)NCBINCBI36hg18NCBI36
Build 342202,724,815 - 202,728,666NCBI
Celera2196,651,081 - 196,654,931 (+)NCBI
Cytogenetic Map2q33.1NCBI
HuRef2194,748,666 - 194,752,510 (+)NCBIHuRef
CHM1_12202,905,837 - 202,909,687 (+)NCBICHM1_1
Fzd7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39159,521,306 - 59,526,114 (+)NCBIGRCm39mm39
GRCm39 Ensembl159,521,583 - 59,526,114 (+)Ensembl
GRCm38159,482,147 - 59,486,955 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl159,482,424 - 59,486,955 (+)EnsemblGRCm38mm10GRCm38
MGSCv37159,538,991 - 59,543,799 (+)NCBIGRCm37mm9NCBIm37
MGSCv36159,426,725 - 59,431,501 (+)NCBImm8
Celera159,998,367 - 60,003,175 (+)NCBICelera
Cytogenetic Map1C2NCBI
cM Map130.08NCBI
Fzd7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2960,931,433 - 60,934,252 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl960,930,875 - 60,935,781 (+)Ensembl
Rnor_6.0966,305,731 - 66,308,550 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl966,305,731 - 66,308,550 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0966,111,942 - 66,114,761 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4958,063,740 - 58,066,559 (+)NCBIRGSC3.4rn4RGSC3.4
Celera958,367,412 - 58,370,231 (+)NCBICelera
Cytogenetic Map9q31NCBI
FZD7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12B207,444,640 - 207,448,359 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B207,439,942 - 207,446,283 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02B89,290,929 - 89,294,873 (+)NCBIMhudiblu_PPA_v0panPan3
FZD7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13711,054,572 - 11,061,173 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3711,053,521 - 11,060,821 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3711,938,845 - 11,942,706 (+)NCBI
ROS_Cfam_1.03710,991,423 - 10,995,284 (+)NCBI
UMICH_Zoey_3.13710,942,332 - 10,946,193 (+)NCBI
UNSW_CanFamBas_1.03710,920,748 - 10,924,609 (+)NCBI
UU_Cfam_GSD_1.03710,913,988 - 10,917,849 (+)NCBI
Fzd7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303159,286,392 - 159,306,586 (+)NCBI
SpeTri2.0NW_0049367261,256,684 - 1,275,324 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FZD7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15105,644,188 - 105,648,854 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115105,644,164 - 105,648,860 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215117,063,360 - 117,067,227 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FZD7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11087,734,263 - 87,738,676 (+)NCBI
ChlSab1.1 Ensembl1087,734,872 - 87,736,596 (+)Ensembl
Vero_WHO_p1.0NW_023666040111,676,427 - 111,681,183 (-)NCBI
Fzd7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476514,399,143 - 14,402,970 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000025903   ⟹   ENSCLAP00000025620
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545712,731,279 - 12,732,979 (-)Ensembl
RefSeq Acc Id: XM_013520752   ⟹   XP_013376206
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545712,729,277 - 12,733,057 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013376206 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013376206   ⟸   XM_013520752
- Sequence:
RefSeq Acc Id: ENSCLAP00000025620   ⟸   ENSCLAT00000025903


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000017729 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000025620 ENTREZGENE
Ensembl Transcript ENSCLAT00000025903 ENTREZGENE
NCBI Gene Fzd7 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-25 Fzd7  frizzled class receptor 7    frizzled family receptor 7  Symbol and/or name change 5135510 APPROVED