Ung (uracil DNA glycosylase) - Rat Genome Database

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Gene: Ung (uracil DNA glycosylase) Chinchilla lanigera
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Symbol: Ung
Name: uracil DNA glycosylase
RGD ID: 8932125
Description: ENCODES a protein that exhibits damaged DNA binding (ortholog); ribosomal small subunit binding (ortholog); uracil DNA N-glycosylase activity (ortholog); INVOLVED IN base-excision repair (ortholog); base-excision repair, AP site formation via deaminated base removal (ortholog); isotype switching (ortholog); ASSOCIATED WITH Bloom syndrome (ortholog); Colorectal Neoplasms (ortholog); dysgammaglobulinemia (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: uracil-DNA glycosylase
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545510,266,989 - 10,282,196 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545510,266,989 - 10,282,196 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
mitochondrion  (ISO)
nucleoplasm  (ISO)
nucleus  (ISO)

Molecular Function

References


Genomics

Comparative Map Data
Ung
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545510,266,989 - 10,282,196 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545510,266,989 - 10,282,196 (+)NCBIChiLan1.0ChiLan1.0
UNG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl12109,097,597 - 109,110,992 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl12109,097,574 - 109,110,992 (+)EnsemblGRCh38hg38GRCh38
GRCh3812109,097,597 - 109,110,992 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3712109,535,402 - 109,548,797 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612108,019,798 - 108,033,181 (+)NCBINCBI36hg18NCBI36
Build 3412107,998,134 - 108,011,518NCBI
Celera12109,159,338 - 109,172,962 (+)NCBI
Cytogenetic Map12q24.11NCBI
HuRef12106,553,817 - 106,567,575 (+)NCBIHuRef
CHM1_112109,503,049 - 109,516,448 (+)NCBICHM1_1
Ung
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395114,268,427 - 114,277,382 (+)NCBIGRCm39mm39
GRCm39 Ensembl5114,268,447 - 114,277,384 (+)Ensembl
GRCm385114,130,366 - 114,139,321 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5114,130,386 - 114,139,323 (+)EnsemblGRCm38mm10GRCm38
MGSCv375114,580,444 - 114,589,330 (+)NCBIGRCm37mm9NCBIm37
MGSCv365114,392,199 - 114,418,049 (+)NCBImm8
Celera5111,232,303 - 111,241,182 (+)NCBICelera
Cytogenetic Map5FNCBI
Ung
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21242,485,276 - 42,494,217 (-)NCBI
Rnor_6.0 Ensembl1248,246,569 - 48,254,822 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01248,246,593 - 48,255,547 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01250,028,792 - 50,037,127 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41243,520,629 - 43,528,873 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11243,384,016 - 43,392,261 (-)NCBI
Celera1244,089,808 - 44,098,015 (-)NCBICelera
Cytogenetic Map12q16NCBI
UNG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.112110,067,882 - 110,080,891 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12110,067,879 - 110,080,891 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v012106,674,073 - 106,687,054 (+)NCBIMhudiblu_PPA_v0panPan3
UNG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12617,900,354 - 17,911,126 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2617,901,357 - 17,911,288 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2617,889,919 - 17,901,192 (+)NCBI
ROS_Cfam_1.02618,244,407 - 18,255,900 (-)NCBI
UMICH_Zoey_3.12618,099,207 - 18,110,426 (+)NCBI
UNSW_CanFamBas_1.02618,235,026 - 18,246,514 (-)NCBI
UU_Cfam_GSD_1.02618,253,824 - 18,265,113 (-)NCBI
Ung
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118144,553,145 - 144,565,155 (-)NCBI
SpeTri2.0NW_004936769911,296 - 922,770 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UNG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1441,746,501 - 41,757,862 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11441,746,498 - 41,757,841 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21444,311,840 - 44,323,500 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UNG
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111104,302,507 - 104,325,160 (+)NCBI
Ung
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474712,261,546 - 12,275,229 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000012571   ⟹   ENSCLAP00000012426
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545510,266,989 - 10,282,196 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000012572   ⟹   ENSCLAP00000012427
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545510,267,844 - 10,281,170 (+)Ensembl
RefSeq Acc Id: XM_005396483   ⟹   XP_005396540
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545510,266,989 - 10,282,196 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005396540 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005396540   ⟸   XM_005396483
- Sequence:
RefSeq Acc Id: ENSCLAP00000012427   ⟸   ENSCLAT00000012572
RefSeq Acc Id: ENSCLAP00000012426   ⟸   ENSCLAT00000012571


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008586 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000012426 ENTREZGENE
Ensembl Transcript ENSCLAT00000012571 ENTREZGENE
NCBI Gene Ung ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-25 Ung  uracil DNA glycosylase    uracil-DNA glycosylase  Symbol and/or name change 5135510 APPROVED