Stat4 (signal transducer and activator of transcription 4)

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Gene: Stat4 (signal transducer and activator of transcription 4) Chinchilla lanigera

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Symbol:

Stat4

Name:

signal transducer and activator of transcription 4

RGD ID:

8823621

Description:

ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to organic cyclic compound (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); autoimmune hepatitis (ortholog); Behcet's disease (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	8,061,471 - 8,144,276 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	8,061,471 - 8,144,252 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

asthma (ISO)

autoimmune hepatitis (ISO)

Behcet's disease (ISO)

Chemical and Drug Induced Liver Injury (ISO)

cholesteatoma (ISO)

Chronic Hepatitis B (ISO)

chronic obstructive pulmonary disease (ISO)

cutaneous leishmaniasis (ISO)

Dermal Fibrosis (ISO)

dermatomyositis (ISO)

diffuse scleroderma (ISO)

disabling pansclerotic morphea (ISO)

Disease Susceptibility (ISO)

Eczema (ISO)

Experimental Autoimmune Encephalomyelitis (ISO)

Experimental Diabetes Mellitus (ISO)

gastric adenocarcinoma (ISO)

genital herpes (ISO)

Graves' disease (ISO)

hepatitis B (ISO)

hepatocellular carcinoma (ISO)

Herpes Simplex Encephalitis (ISO)

herpes simplex virus keratitis (ISO)

IgA glomerulonephritis (ISO)

immunodeficiency 31B (ISO)

limited scleroderma (ISO)

lupus nephritis (ISO)

metabolic dysfunction and alcohol associated liver disease (ISO)

multiple sclerosis (ISO)

Neointima (ISO)

Neurodevelopmental Disorders (ISO)

obesity (ISO)

Oral Ulcer (ISO)

polymyositis (ISO)

primary biliary cholangitis (ISO)

psoriasis (ISO)

psoriatic arthritis (ISO)

rectum adenocarcinoma (ISO)

rheumatoid arthritis (ISO)

Sepsis (ISO)

Sezary's disease (ISO)

Sjogren's syndrome (ISO)

steatotic liver disease (ISO)

systemic lupus erythematosus (ISO)

systemic scleroderma (ISO)

Transplant Rejection (ISO)

type 1 diabetes mellitus (ISO)

viral hepatitis (ISO)

visceral leishmaniasis (ISO)

Vogt-Koyanagi-Harada disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to cytokine stimulus (ISO)

cellular response to organic cyclic compound (ISO)

cytokine-mediated signaling pathway (ISO)

hematopoietic stem cell homeostasis (ISO)

interleukin-12-mediated signaling pathway (ISO)

leukocyte proliferation (ISO)

positive regulation of gene expression (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

protein phosphorylation (ISO)

response to interleukin-6 (ISO)

T-helper 1 cell differentiation (ISO)

Cellular Component

nucleus (ISO)

RNA polymerase II transcription regulator complex (ISO)

Molecular Function

DNA binding (ISO)

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription factor activity (ISO)

identical protein binding (ISO)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (ISO)

sequence-specific DNA binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

interleukin-12 signaling pathway (ISO)

interleukin-23 signaling pathway (ISO)

interleukin-27 signaling pathway (ISO)

Jak-Stat signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Stat4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	8,061,471 - 8,144,276 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	8,061,471 - 8,144,252 (+)	NCBI	ChiLan1.0	ChiLan1.0

STAT4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	191,029,576 - 191,151,596 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	191,029,576 - 191,178,435 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	191,894,302 - 192,016,322 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	191,602,551 - 191,724,170 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	191,719,811 - 191,841,431	NCBI
Celera	2	185,488,908 - 185,610,548 (-)	NCBI		Celera
Cytogenetic Map	2	q32.2-q32.3	NCBI
HuRef	2	183,753,956 - 183,875,743 (-)	NCBI		HuRef
CHM1_1	2	191,900,128 - 192,022,113 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	191,518,699 - 191,663,236 (-)	NCBI		T2T-CHM13v2.0

Stat4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	52,026,265 - 52,146,348 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	52,026,307 - 52,146,348 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	51,987,106 - 52,107,189 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	51,987,148 - 52,107,189 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	52,065,088 - 52,164,028 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	51,952,789 - 52,051,729 (+)	NCBI		MGSCv36	mm8
Celera	1	52,546,764 - 52,645,629 (+)	NCBI		Celera
Cytogenetic Map	1	C1.1	NCBI
cM Map	1	26.67	NCBI

Stat4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	56,964,617 - 57,080,523 (-)	NCBI		GRCr8
mRatBN7.2	9	49,472,660 - 49,588,540 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	49,419,340 - 49,588,540 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	58,021,896 - 58,130,745 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	63,144,732 - 63,253,572 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	61,440,716 - 61,549,562 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	54,340,649 - 54,457,753 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	54,287,541 - 54,484,533 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	54,051,154 - 54,167,491 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	46,510,251 - 46,650,076 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	46,511,665 - 46,651,490 (-)	NCBI
Celera	9	47,135,713 - 47,243,684 (-)	NCBI		Celera
Cytogenetic Map	9	q22	NCBI

STAT4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	93,711,969 - 93,930,627 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	93,727,052 - 93,945,611 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	78,331,402 - 78,549,231 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	196,247,617 - 196,394,154 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	196,247,881 - 196,366,011 (-)	Ensembl	panpan1.1		panPan2

STAT4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	1,566,563 - 1,685,378 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	1,566,585 - 1,829,894 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	2,514,598 - 2,633,404 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	1,453,968 - 1,572,676 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	1,453,990 - 1,550,821 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	1,463,313 - 1,581,898 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	1,431,241 - 1,549,848 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	1,459,885 - 1,578,875 (-)	NCBI		UU_Cfam_GSD_1.0

Stat4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	149,652,139 - 149,767,224 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936506	7,095,009 - 7,184,689 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936506	7,091,982 - 7,185,938 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STAT4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	95,656,077 - 95,763,472 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	95,656,206 - 95,764,099 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	106,914,582 - 106,960,243 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	15	107,069,138 - 107,073,997 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STAT4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	76,553,626 - 76,708,540 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	76,553,606 - 76,674,928 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	122,773,405 - 122,923,766 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Stat4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624854	4,976,507 - 5,057,391 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624854	4,975,724 - 5,056,940 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005373293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005373294	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005373295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01001867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01001868	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01001869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01082623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000016763 ⟹ ENSCLAP00000016599

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955403	8,061,471 - 8,144,276 (+)	Ensembl

Ensembl Acc Id:

ENSCLAT00000016764 ⟹ ENSCLAP00000016600

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955403	8,064,457 - 8,143,979 (+)	Ensembl

RefSeq Acc Id:

XM_005373293 ⟹ XP_005373350

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955403	8,061,471 - 8,144,252 (+)	NCBI

Sequence:

show sequence

AACAGGCCGCGTCACAGAGGGAAAGAGACCCTGGCTACCGGAGGCGGGGAGAGAGAGGATGTCG
CGGGCGCTGGTGACTGCCCTGGAGCTGGCCCCGGGGTCCGAGCCTCAGGACTGGGGCGCTGGTC
GGGGCGGCTGTCCTTCCGCGAGGCTGGGGGGCGTCTGAACCCCAGAAGCCAGCATGGCTCAGTG
GAATCAAGTCCAACAGTTAGAAATCAAGTTTTTGGAACAAGTAGATCAATTCTATGATGACAAC
TTTCCTATGGAAATACGACATCTGCTGGCCCAGTGGATTGAAAATCAAGACTGGGAGGCAGCTT
CTAACAATGAAACCATGGCAACAATTCTTCTTCAAAACTTGTTAATACAACTGGATGACCAGTT
AGGTCGTGTTTCCAAGGAGAAAAACCTGCTCTTGATACACAATCTAAAAAGAATTAGGAAAGTC
CTTCAGGGAAAGTTTCATGGAAATCCAATGCATGTAGCTGTGGTTATTTCTAATTGTTTAAGGG
AAGAAAGGAGAATATTGGCTACAGCCAACATGCCTGTGCAGGGACCCCTGGAGAAATCCTTACA
GAGTTCTTCAGTTTCAGAAAGACAGAGGAACGTGGAGCACAAAGTGGCTGCCATTAAAAACAGC
GTGCAGATGACAGAACAAGACACCAAATACTTAGAGGACCTGCAAGATGAATTTGACTACAGAT
ATAAAACAATTCAGACAATGGATCAGGGAGACAAGAATAATGTCCTAATGAATCAGGAAGTTTT
GACCCTGCAAGAAATGCTCAACAGCCTGGACTTCAAGAGGAAGGAGGCCCTCAGTAAGATGACG
CAGATAGTGAATGAGATGGACTTGCTGACGAGCAGCATGCTGATAGAGGAGCTGCAGGACTGGA
AGCGGCGACAGCAGATCGCCTGCATCGGGGGTCCCCTCCACAATGGGCTCGACCAGCTTCAGAA
CTGCTTCACCCTACTGGCAGAAAGTCTGTTCCAACTCAGAAGGCAACTGGAGAAATTGGAGGAG
CAATCTACCAAAATGACGTATGATGGTGACCCTATCCCCATGCAAAGAGCACACCTGCTAGAAA
GAGTCACCTTCTTGATCTACAACCTTTTCAAGAACTCCTTTGTGGTTGAGCGACAGCCATGTAT
GCCAACCCACCCACAGAGGCCGCTGGTACTTAAAACCCTCATTCAGTTCACGGTGAAGCTAAGA
CTACTAGTTAAATTGCCAGAACTAAACTATCAGGTGAAGGTTAAAGCTTCCATTGACAAGAATG
TTGCAACTCTAAGCAATCGAAGATTTGTCCTTTGTGGAACACATGTCAAAGCCATGTCCATTGA
AGAATCTTCTAATGGAAGTCTCTCCGTGGAATTTAGGCATTTGCAACCGAAAGAAATGAAGTCC
AGTGCTGGAAGCAAAGGAAATGAGGGCTGCCACGTGGTGACTGAAGAGCTTCATTCCATAACCT
TCGAGACACAGATCTGCCTCTCCGGCCTGACCATCGATTTGGAGACCAGCTCATTACCCGTGGT
GATGATTTCCAATGTCAGTCAGCTGCCTAACGCTTGGGCGTCCATCATTTGGTACAACGTGTCA
ACCAACGATTCCCAGAACTTGGTTTTCTTTAGCAACCCTCCGCCTGCCACTTTGAGCCAGCTCC
TGGAAGTCATGAGTTGGCAGTTTTCATCCTATGTTGGTCGTGGCCTTAATTCAGATCAACTCAA
TATGCTGGCCGAGAAGCTTACAGTGCAATCTAGCTACAGTGATGGGCATCTCACCTGGGCGAAG
TTCTGCAAGGAACACTTACCTGGTAAATCATTTACCTTTTGGACATGGCTTGAAGCAATACTGG
ATCTAATTAAGAAACACATTCTTCCCCTTTGGATTGATGGGTATGTCATGGGCTTCGTTAGCAA
AGAAAAGGAGAGGCTGCTGCTCAAGGATAAAATGCCCGGAACTTTTTTGTTAAGATTCAGTGAA
AGCCATCTTGGAGGGATAACTTTCACCTGGGTGGACCATTCTGAGAACGGAGAAGTGAGATTCC
ACTCTGTAGAACCCTACAACAAAGGCCGGCTGTCTGCTCTGCCATTTGCTGACATCCTTCGAGA
CTACAAGGTTATTATGGCTGAAAACATTCCAGAAAACCCTCTGAAGTATCTGTATCCTGACATT
CCCAAAGACAAGGCCTTTGGAAAACACTACAGCTCCCAGCCGTGCGAAGTTTCAAGACCGACAG
AGAGGGGAGACAAAGGTTATGTTCCTTCGGTTTTTATCCCTATTTCCACAATCCGAAGTGATTC
GACTGAGCCCCAGTCCCCCTCAGACCTCCTTCCCATGTCTCCGAGTGTATATGCAGTGCTGAGA
GAGAACCTGAGTCCCGCAACCATCGAAACTGCTATGAAGTCGCCGTATTCTGCTGACTGACCGG
ATAAACTCTGCCATGTCAAAGGAAGCAAATGAAAAAGTTTAGAGACTGTTCTTTGCCAAAGATA
ACATCTTATATCTTCAGCTTTGTAAATACTGGTTTCAGGGAAATGGACAAATGATAGGAATCCG
AAACACCCCCTCACTGGCCTGATACCCCAACTGGGAGTGCTGCAACTGCAGGCCAAAAACCAAG
CTGCAGGTCAACCCAGAAGACGTGCTACCTTTAAGGAATCAGTATTAGTAACAATATAATATCA
ACAAAATACAGTA

hide sequence

RefSeq Acc Id:

XM_005373294 ⟹ XP_005373351

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955403	8,061,859 - 8,144,252 (+)	NCBI

Sequence:

show sequence

GGAGAAATGCAAATCCGCGGCCGAGGGCGGCCGCGGCGGGGCGGGAGGGAGGCGACCGCCGGAC
CTGAGCTCCGGACCCGACGCGGTGGGAGCAGCCAGCATGGCTCAGTGGAATCAAGTCCAACAGT
TAGAAATCAAGTTTTTGGAACAAGTAGATCAATTCTATGATGACAACTTTCCTATGGAAATACG
ACATCTGCTGGCCCAGTGGATTGAAAATCAAGACTGGGAGGCAGCTTCTAACAATGAAACCATG
GCAACAATTCTTCTTCAAAACTTGTTAATACAACTGGATGACCAGTTAGGTCGTGTTTCCAAGG
AGAAAAACCTGCTCTTGATACACAATCTAAAAAGAATTAGGAAAGTCCTTCAGGGAAAGTTTCA
TGGAAATCCAATGCATGTAGCTGTGGTTATTTCTAATTGTTTAAGGGAAGAAAGGAGAATATTG
GCTACAGCCAACATGCCTGTGCAGGGACCCCTGGAGAAATCCTTACAGAGTTCTTCAGTTTCAG
AAAGACAGAGGAACGTGGAGCACAAAGTGGCTGCCATTAAAAACAGCGTGCAGATGACAGAACA
AGACACCAAATACTTAGAGGACCTGCAAGATGAATTTGACTACAGATATAAAACAATTCAGACA
ATGGATCAGGGAGACAAGAATAATGTCCTAATGAATCAGGAAGTTTTGACCCTGCAAGAAATGC
TCAACAGCCTGGACTTCAAGAGGAAGGAGGCCCTCAGTAAGATGACGCAGATAGTGAATGAGAT
GGACTTGCTGACGAGCAGCATGCTGATAGAGGAGCTGCAGGACTGGAAGCGGCGACAGCAGATC
GCCTGCATCGGGGGTCCCCTCCACAATGGGCTCGACCAGCTTCAGAACTGCTTCACCCTACTGG
CAGAAAGTCTGTTCCAACTCAGAAGGCAACTGGAGAAATTGGAGGAGCAATCTACCAAAATGAC
GTATGATGGTGACCCTATCCCCATGCAAAGAGCACACCTGCTAGAAAGAGTCACCTTCTTGATC
TACAACCTTTTCAAGAACTCCTTTGTGGTTGAGCGACAGCCATGTATGCCAACCCACCCACAGA
GGCCGCTGGTACTTAAAACCCTCATTCAGTTCACGGTGAAGCTAAGACTACTAGTTAAATTGCC
AGAACTAAACTATCAGGTGAAGGTTAAAGCTTCCATTGACAAGAATGTTGCAACTCTAAGCAAT
CGAAGATTTGTCCTTTGTGGAACACATGTCAAAGCCATGTCCATTGAAGAATCTTCTAATGGAA
GTCTCTCCGTGGAATTTAGGCATTTGCAACCGAAAGAAATGAAGTCCAGTGCTGGAAGCAAAGG
AAATGAGGGCTGCCACGTGGTGACTGAAGAGCTTCATTCCATAACCTTCGAGACACAGATCTGC
CTCTCCGGCCTGACCATCGATTTGGAGACCAGCTCATTACCCGTGGTGATGATTTCCAATGTCA
GTCAGCTGCCTAACGCTTGGGCGTCCATCATTTGGTACAACGTGTCAACCAACGATTCCCAGAA
CTTGGTTTTCTTTAGCAACCCTCCGCCTGCCACTTTGAGCCAGCTCCTGGAAGTCATGAGTTGG
CAGTTTTCATCCTATGTTGGTCGTGGCCTTAATTCAGATCAACTCAATATGCTGGCCGAGAAGC
TTACAGTGCAATCTAGCTACAGTGATGGGCATCTCACCTGGGCGAAGTTCTGCAAGGAACACTT
ACCTGGTAAATCATTTACCTTTTGGACATGGCTTGAAGCAATACTGGATCTAATTAAGAAACAC
ATTCTTCCCCTTTGGATTGATGGGTATGTCATGGGCTTCGTTAGCAAAGAAAAGGAGAGGCTGC
TGCTCAAGGATAAAATGCCCGGAACTTTTTTGTTAAGATTCAGTGAAAGCCATCTTGGAGGGAT
AACTTTCACCTGGGTGGACCATTCTGAGAACGGAGAAGTGAGATTCCACTCTGTAGAACCCTAC
AACAAAGGCCGGCTGTCTGCTCTGCCATTTGCTGACATCCTTCGAGACTACAAGGTTATTATGG
CTGAAAACATTCCAGAAAACCCTCTGAAGTATCTGTATCCTGACATTCCCAAAGACAAGGCCTT
TGGAAAACACTACAGCTCCCAGCCGTGCGAAGTTTCAAGACCGACAGAGAGGGGAGACAAAGGT
TATGTTCCTTCGGTTTTTATCCCTATTTCCACAATCCGAAGTGATTCGACTGAGCCCCAGTCCC
CCTCAGACCTCCTTCCCATGTCTCCGAGTGTATATGCAGTGCTGAGAGAGAACCTGAGTCCCGC
AACCATCGAAACTGCTATGAAGTCGCCGTATTCTGCTGACTGACCGGATAAACTCTGCCATGTC
AAAGGAAGCAAATGAAAAAGTTTAGAGACTGTTCTTTGCCAAAGATAACATCTTATATCTTCAG
CTTTGTAAATACTGGTTTCAGGGAAATGGACAAATGATAGGAATCCGAAACACCCCCTCACTGG
CCTGATACCCCAACTGGGAGTGCTGCAACTGCAGGCCAAAAACCAAGCTGCAGGTCAACCCAGA
AGACGTGCTACCTTTAAGGAATCAGTATTAGTAACAATATAATATCAACAAAATACAGTA

hide sequence

RefSeq Acc Id:

XM_005373295 ⟹ XP_005373352

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955403	8,061,471 - 8,144,252 (+)	NCBI

Sequence:

show sequence

AACAGGCCGCGTCACAGAGGGAAAGAGACCCTGGCTACCGGAGGCGGGGAGAGAGAGGATGTCG
CGGGCGCTGGTGACTGCCCTGGAGCTGGCCCCGGGGTCCGAGCCTCAGGACTGGGGCGCTGGTC
GGGGCGGCTGTCCTTCCGCGAGGCTGGGGGGCGTCTGAACCCCAGAAGCCAGGTAGCCAAGGAG
CTCCAGCATGGCTCAGTGGAATCAAGTCCAACAGTTAGAAATCAAGTTTTTGGAACAAGTAGAT
CAATTCTATGATGACAACTTTCCTATGGAAATACGACATCTGCTGGCCCAGTGGATTGAAAATC
AAGACTGGGAGGCAGCTTCTAACAATGAAACCATGGCAACAATTCTTCTTCAAAACTTGTTAAT
ACAACTGGATGACCAGTTAGGTCGTGTTTCCAAGGAGAAAAACCTGCTCTTGATACACAATCTA
AAAAGAATTAGGAAAGTCCTTCAGGGAAAGTTTCATGGAAATCCAATGCATGTAGCTGTGGTTA
TTTCTAATTGTTTAAGGGAAGAAAGGAGAATATTGGCTACAGCCAACATGCCTGTGCAGGGACC
CCTGGAGAAATCCTTACAGAGTTCTTCAGTTTCAGAAAGACAGAGGAACGTGGAGCACAAAGTG
GCTGCCATTAAAAACAGCGTGCAGATGACAGAACAAGACACCAAATACTTAGAGGACCTGCAAG
ATGAATTTGACTACAGATATAAAACAATTCAGACAATGGATCAGGGAGACAAGAATAATGTCCT
AATGAATCAGGAAGTTTTGACCCTGCAAGAAATGCTCAACAGCCTGGACTTCAAGAGGAAGGAG
GCCCTCAGTAAGATGACGCAGATAGTGAATGAGATGGACTTGCTGACGAGCAGCATGCTGATAG
AGGAGCTGCAGGACTGGAAGCGGCGACAGCAGATCGCCTGCATCGGGGGTCCCCTCCACAATGG
GCTCGACCAGCTTCAGAACTGCTTCACCCTACTGGCAGAAAGTCTGTTCCAACTCAGAAGGCAA
CTGGAGAAATTGGAGGAGCAATCTACCAAAATGACGTATGATGGTGACCCTATCCCCATGCAAA
GAGCACACCTGCTAGAAAGAGTCACCTTCTTGATCTACAACCTTTTCAAGAACTCCTTTGTGGT
TGAGCGACAGCCATGTATGCCAACCCACCCACAGAGGCCGCTGGTACTTAAAACCCTCATTCAG
TTCACGGTGAAGCTAAGACTACTAGTTAAATTGCCAGAACTAAACTATCAGGTGAAGGTTAAAG
CTTCCATTGACAAGAATGTTGCAACTCTAAGCAATCGAAGATTTGTCCTTTGTGGAACACATGT
CAAAGCCATGTCCATTGAAGAATCTTCTAATGGAAGTCTCTCCGTGGAATTTAGGCATTTGCAA
CCGAAAGAAATGAAGTCCAGTGCTGGAAGCAAAGGAAATGAGGGCTGCCACGTGGTGACTGAAG
AGCTTCATTCCATAACCTTCGAGACACAGATCTGCCTCTCCGGCCTGACCATCGATTTGGAGAC
CAGCTCATTACCCGTGGTGATGATTTCCAATGTCAGTCAGCTGCCTAACGCTTGGGCGTCCATC
ATTTGGTACAACGTGTCAACCAACGATTCCCAGAACTTGGTTTTCTTTAGCAACCCTCCGCCTG
CCACTTTGAGCCAGCTCCTGGAAGTCATGAGTTGGCAGTTTTCATCCTATGTTGGTCGTGGCCT
TAATTCAGATCAACTCAATATGCTGGCCGAGAAGCTTACAGTGCAATCTAGCTACAGTGATGGG
CATCTCACCTGGGCGAAGTTCTGCAAGGAACACTTACCTGGTAAATCATTTACCTTTTGGACAT
GGCTTGAAGCAATACTGGATCTAATTAAGAAACACATTCTTCCCCTTTGGATTGATGGGTATGT
CATGGGCTTCGTTAGCAAAGAAAAGGAGAGGCTGCTGCTCAAGGATAAAATGCCCGGAACTTTT
TTGTTAAGATTCAGTGAAAGCCATCTTGGAGGGATAACTTTCACCTGGGTGGACCATTCTGAGA
ACGGAGAAGTGAGATTCCACTCTGTAGAACCCTACAACAAAGGCCGGCTGTCTGCTCTGCCATT
TGCTGACATCCTTCGAGACTACAAGGTTATTATGGCTGAAAACATTCCAGAAAACCCTCTGAAG
TATCTGTATCCTGACATTCCCAAAGACAAGGCCTTTGGAAAACACTACAGCTCCCAGCCGTGCG
AAGTTTCAAGACCGACAGAGAGGGGAGACAAAGGTTATGTTCCTTCGGTTTTTATCCCTATTTC
CACAATCCGAAGTGATTCGACTGAGCCCCAGTCCCCCTCAGACCTCCTTCCCATGTCTCCGAGT
GTATATGCAGTGCTGAGAGAGAACCTGAGTCCCGCAACCATCGAAACTGCTATGAAGTCGCCGT
ATTCTGCTGACTGACCGGATAAACTCTGCCATGTCAAAGGAAGCAAATGAAAAAGTTTAGAGAC
TGTTCTTTGCCAAAGATAACATCTTATATCTTCAGCTTTGTAAATACTGGTTTCAGGGAAATGG
ACAAATGATAGGAATCCGAAACACCCCCTCACTGGCCTGATACCCCAACTGGGAGTGCTGCAAC
TGCAGGCCAAAAACCAAGCTGCAGGTCAACCCAGAAGACGTGCTACCTTTAAGGAATCAGTATT
AGTAACAATATAATATCAACAAAATACAGTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005373350	(Get FASTA)	NCBI Sequence Viewer
	XP_005373351	(Get FASTA)	NCBI Sequence Viewer
	XP_005373352	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000016599
	ENSCLAP00000016599.1
	ENSCLAP00000016600
	ENSCLAP00000016600.1

RefSeq Acc Id:

XP_005373352 ⟸ XM_005373295

- UniProtKB:

A0A8C2YQV4 (UniProtKB/TrEMBL), A0A8C2YQV1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNLLIQL
DDQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILATANMPVQGPLE
KSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQTMDQGDKNNVLMN
QEVLTLQEMLNSLDFKRKEALSKMTQIVNEMDLLTSSMLIEELQDWKRRQQIACIGGPLHNGLD
QLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYDGDPIPMQRAHLLERVTFLIYNLFKNSFVVER
QPCMPTHPQRPLVLKTLIQFTVKLRLLVKLPELNYQVKVKASIDKNVATLSNRRFVLCGTHVKA
MSIEESSNGSLSVEFRHLQPKEMKSSAGSKGNEGCHVVTEELHSITFETQICLSGLTIDLETSS
LPVVMISNVSQLPNAWASIIWYNVSTNDSQNLVFFSNPPPATLSQLLEVMSWQFSSYVGRGLNS
DQLNMLAEKLTVQSSYSDGHLTWAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMG
FVSKEKERLLLKDKMPGTFLLRFSESHLGGITFTWVDHSENGEVRFHSVEPYNKGRLSALPFAD
ILRDYKVIMAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEVSRPTERGDKGYVPSVFIPISTI
RSDSTEPQSPSDLLPMSPSVYAVLRENLSPATIETAMKSPYSAD

hide sequence

RefSeq Acc Id:

XP_005373350 ⟸ XM_005373293

- UniProtKB:

A0A8C2YQV4 (UniProtKB/TrEMBL), A0A8C2YQV1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNLLIQL
DDQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILATANMPVQGPLE
KSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQTMDQGDKNNVLMN
QEVLTLQEMLNSLDFKRKEALSKMTQIVNEMDLLTSSMLIEELQDWKRRQQIACIGGPLHNGLD
QLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYDGDPIPMQRAHLLERVTFLIYNLFKNSFVVER
QPCMPTHPQRPLVLKTLIQFTVKLRLLVKLPELNYQVKVKASIDKNVATLSNRRFVLCGTHVKA
MSIEESSNGSLSVEFRHLQPKEMKSSAGSKGNEGCHVVTEELHSITFETQICLSGLTIDLETSS
LPVVMISNVSQLPNAWASIIWYNVSTNDSQNLVFFSNPPPATLSQLLEVMSWQFSSYVGRGLNS
DQLNMLAEKLTVQSSYSDGHLTWAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMG
FVSKEKERLLLKDKMPGTFLLRFSESHLGGITFTWVDHSENGEVRFHSVEPYNKGRLSALPFAD
ILRDYKVIMAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEVSRPTERGDKGYVPSVFIPISTI
RSDSTEPQSPSDLLPMSPSVYAVLRENLSPATIETAMKSPYSAD

hide sequence

RefSeq Acc Id:

XP_005373351 ⟸ XM_005373294

- UniProtKB:

A0A8C2YQV4 (UniProtKB/TrEMBL), A0A8C2YQV1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNLLIQL
DDQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILATANMPVQGPLE
KSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQTMDQGDKNNVLMN
QEVLTLQEMLNSLDFKRKEALSKMTQIVNEMDLLTSSMLIEELQDWKRRQQIACIGGPLHNGLD
QLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYDGDPIPMQRAHLLERVTFLIYNLFKNSFVVER
QPCMPTHPQRPLVLKTLIQFTVKLRLLVKLPELNYQVKVKASIDKNVATLSNRRFVLCGTHVKA
MSIEESSNGSLSVEFRHLQPKEMKSSAGSKGNEGCHVVTEELHSITFETQICLSGLTIDLETSS
LPVVMISNVSQLPNAWASIIWYNVSTNDSQNLVFFSNPPPATLSQLLEVMSWQFSSYVGRGLNS
DQLNMLAEKLTVQSSYSDGHLTWAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMG
FVSKEKERLLLKDKMPGTFLLRFSESHLGGITFTWVDHSENGEVRFHSVEPYNKGRLSALPFAD
ILRDYKVIMAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEVSRPTERGDKGYVPSVFIPISTI
RSDSTEPQSPSDLLPMSPSVYAVLRENLSPATIETAMKSPYSAD

hide sequence

Ensembl Acc Id:

ENSCLAP00000016599 ⟸ ENSCLAT00000016763

Ensembl Acc Id:

ENSCLAP00000016600 ⟸ ENSCLAT00000016764

Protein Domains

SH2

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000011405	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000016763	ENTREZGENE
	ENSCLAT00000016763.1	UniProtKB/TrEMBL
	ENSCLAT00000016764	ENTREZGENE
	ENSCLAT00000016764.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.532.10	UniProtKB/TrEMBL
	2.60.40.630	UniProtKB/TrEMBL
	3.30.505.10	UniProtKB/TrEMBL
	EF-hand	UniProtKB/TrEMBL
	STAT transcription factor, all-alpha domain	UniProtKB/TrEMBL
InterPro	p53-like_TF_DNA-bd	UniProtKB/TrEMBL
	SH2	UniProtKB/TrEMBL
	SH2_dom_sf	UniProtKB/TrEMBL
	STAT	UniProtKB/TrEMBL
	STAT4	UniProtKB/TrEMBL
	STAT4_CCD	UniProtKB/TrEMBL
	STAT4_SH2	UniProtKB/TrEMBL
	STAT_linker	UniProtKB/TrEMBL
	STAT_N_sf	UniProtKB/TrEMBL
	STAT_TF_alpha	UniProtKB/TrEMBL
	STAT_TF_coiled-coil	UniProtKB/TrEMBL
	STAT_TF_DNA-bd	UniProtKB/TrEMBL
	STAT_TF_DNA-bd_N	UniProtKB/TrEMBL
	STAT_TF_prot_interaction	UniProtKB/TrEMBL
NCBI Gene	Stat4	ENTREZGENE
PANTHER	PTHR11801	UniProtKB/TrEMBL
	PTHR11801:SF19	UniProtKB/TrEMBL
Pfam	SH2	UniProtKB/TrEMBL
	STAT_alpha	UniProtKB/TrEMBL
	STAT_bind	UniProtKB/TrEMBL
	STAT_int	UniProtKB/TrEMBL
	STAT_linker	UniProtKB/TrEMBL
PROSITE	SH2	UniProtKB/TrEMBL
SMART	STAT_int	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47655	UniProtKB/TrEMBL
	SSF48092	UniProtKB/TrEMBL
	SSF49417	UniProtKB/TrEMBL
	SSF55550	UniProtKB/TrEMBL
UniProt	A0A8C2YQV1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YQV4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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Imported Annotations - PID (archival)