Gene: Stat4 (signal transducer and activator of transcription 4) Ictidomys tridecemlineatus

Analyze

Symbol:

Stat4

Name:

signal transducer and activator of transcription 4

RGD ID:

12655590

Description:

ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to cytokine stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); autoimmune hepatitis (ortholog); FOUND IN cytoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

signal transducer and activator of transcription 4, transcript variant X1; signal transducer and activator of transcription 4, transcript variant X2; signal transducer and activator of transcription 4, transcript variant X3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mIctTri1.hap1 - mIctTri1.hap1 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mIctTri1.hap1	7	156,651,620 - 156,745,658 (-)	NCBI		mIctTri1.hap1
HiC_Itri_2	NW_024405303	149,652,139 - 149,767,224 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936506	7,095,009 - 7,184,689 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936506	7,091,982 - 7,185,938 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

anxiety disorder (ISO)

asthma (ISO)

autoimmune hepatitis (ISO)

Behcet's disease (ISO)

bipolar disorder (ISO)

Breast Cancer, Familial (ISO)

Chemical and Drug Induced Liver Injury (ISO)

cholesteatoma (ISO)

Chronic Hepatitis B (ISO)

chronic obstructive pulmonary disease (ISO)

clear cell renal cell carcinoma (ISO)

cutaneous leishmaniasis (ISO)

Dermal Fibrosis (ISO)

dermatomyositis (ISO)

diffuse scleroderma (ISO)

disabling pansclerotic morphea (ISO)

disease by infectious agent (ISO)

Disease Susceptibility (ISO)

Eczema (ISO)

esophageal cancer (ISO)

Experimental Autoimmune Encephalomyelitis (ISO)

Experimental Diabetes Mellitus (ISO)

gastric adenocarcinoma (ISO)

genital herpes (ISO)

Graves' disease (ISO)

head and neck squamous cell carcinoma (ISO)

hepatitis B (ISO)

hepatocellular carcinoma (ISO)

Herpes Simplex Encephalitis (ISO)

herpes simplex virus keratitis (ISO)

IgA glomerulonephritis (ISO)

limited scleroderma (ISO)

lung squamous cell carcinoma (ISO)

lupus nephritis (ISO)

melanoma (ISO)

metabolic dysfunction and alcohol associated liver disease (ISO)

multiple sclerosis (ISO)

Neointima (ISO)

Nervous System Malformations (ISO)

nonpapillary renal cell carcinoma (ISO)

obesity (ISO)

Oral Ulcer (ISO)

ovarian serous cystadenocarcinoma (ISO)

polymyositis (ISO)

primary biliary cholangitis (ISO)

psoriasis (ISO)

psoriatic arthritis (ISO)

rectum adenocarcinoma (ISO)

rheumatoid arthritis (ISO)

sarcoma (ISO)

Sepsis (ISO)

Sezary's disease (ISO)

Sjogren's syndrome (ISO)

steatotic liver disease (ISO)

stomach cancer (ISO)

systemic lupus erythematosus (ISO)

systemic scleroderma (ISO)

Transplant Rejection (ISO)

type 1 diabetes mellitus (ISO)

urinary bladder cancer (ISO)

uterine corpus endometrial carcinoma (ISO)

viral hepatitis (ISO)

visceral leishmaniasis (ISO)

Vogt-Koyanagi-Harada disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell population proliferation (ISO)

cell surface receptor signaling pathway via JAK-STAT (IEA)

cellular response to cytokine stimulus (ISO)

cytokine-mediated signaling pathway (ISO)

defense response to virus (IEA)

hematopoietic stem cell homeostasis (ISO)

interleukin-12-mediated signaling pathway (IEA)

positive regulation of gene expression (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

protein phosphorylation (ISO)

regulation of apoptotic process (IEA)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IEA)

response to interleukin-6 (IEA)

signal transduction (IEA)

T-helper 1 cell differentiation (IEA)

type I interferon-mediated signaling pathway (IEA)

type II interferon-mediated signaling pathway (IEA)

Cellular Component

cytoplasm (IEA,ISO)

nuclear body (IEA)

nucleoplasm (IEA)

nucleus (IEA)

RNA polymerase II transcription regulator complex (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription factor activity (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

identical protein binding (IEA)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (ISO)

sequence-specific DNA binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

interleukin-12 signaling pathway (ISO)

interleukin-23 signaling pathway (ISO)

interleukin-27 signaling pathway (ISO)

Jak-Stat signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Stat4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mIctTri1.hap1	7	156,651,620 - 156,745,658 (-)	NCBI		mIctTri1.hap1
HiC_Itri_2	NW_024405303	149,652,139 - 149,767,224 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936506	7,095,009 - 7,184,689 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936506	7,091,982 - 7,185,938 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STAT4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	191,029,576 - 191,151,596 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	191,029,570 - 191,178,435 (-)	Ensembl		GRCh38.p14 Ensembl	hg38	GRCh38
GRCh37	2	191,894,302 - 192,016,322 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	191,602,551 - 191,724,170 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	191,719,811 - 191,841,431	NCBI
Celera	2	185,488,908 - 185,610,548 (-)	NCBI		Celera
Cytogenetic Map	2	q32.2-q32.3	NCBI
HuRef	2	183,753,956 - 183,875,743 (-)	NCBI		HuRef
CHM1_1	2	191,900,128 - 192,022,113 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	191,518,699 - 191,663,236 (-)	NCBI		T2T-CHM13v2.0

Stat4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	52,026,265 - 52,146,348 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	52,026,307 - 52,151,423 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	51,987,106 - 52,107,189 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	51,987,148 - 52,107,189 (+)	Ensembl		GRCm38.p6 Ensembl	mm10	GRCm38
MGSCv37	1	52,065,088 - 52,164,028 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	51,952,789 - 52,051,729 (+)	NCBI		MGSCv36	mm8
Celera	1	52,546,764 - 52,645,629 (+)	NCBI		Celera
Cytogenetic Map	1	C1.1	NCBI
cM Map	1	26.67	NCBI

Stat4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	56,964,617 - 57,080,523 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	56,911,523 - 57,077,346 (-)	Ensembl				GRCr8
mRatBN7.2	9	49,472,660 - 49,588,540 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	49,419,340 - 49,588,540 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	58,021,896 - 58,130,745 (-)	NCBI	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	63,144,732 - 63,253,572 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	61,440,716 - 61,549,562 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	9	60,766,106 - 60,874,952 (-)	NCBI
Lyon_Normotensive	9	56,541,537 - 56,650,381 (-)	NCBI
Lyon_Hypertensive	9	56,677,390 - 56,786,235 (-)	NCBI
F344_StmMcwi	9	58,592,966 - 58,701,817 (-)	NCBI
Rnor_6.0	9	54,340,649 - 54,457,753 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	54,287,541 - 54,484,533 (-)	Ensembl		Rnor_6.0 Ensembl	rn6	Rnor6.0
Rnor_5.0	9	54,051,154 - 54,167,491 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	46,510,251 - 46,650,076 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	47,135,713 - 47,243,684 (-)	NCBI		Celera
RGSC_v3.1	9	46,511,665 - 46,651,490 (-)	NCBI
Cytogenetic Map	9	q22	NCBI

Stat4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	8,061,471 - 8,144,276 (+)	Ensembl		ChiLan1.0 Ensembl
ChiLan1.0	NW_004955403	8,061,471 - 8,144,252 (+)	NCBI	ChiLan1.0	ChiLan1.0

STAT4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	93,711,969 - 93,930,627 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	93,727,052 - 93,945,611 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	78,331,402 - 78,549,231 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	196,247,617 - 196,394,154 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	196,247,881 - 196,366,011 (-)	Ensembl		PanPan1.1 Ensembl	panPan2	panpan1.1

STAT4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	1,566,563 - 1,685,378 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	1,566,585 - 1,829,894 (-)	Ensembl		CanFam3.1 Ensembl	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	2,514,598 - 2,633,404 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	1,453,968 - 1,572,676 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	1,453,990 - 1,550,821 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	1,463,313 - 1,581,898 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	1,431,241 - 1,549,848 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	1,459,885 - 1,578,875 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

STAT4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	95,656,077 - 95,763,472 (-)	Ensembl		Sscrofa11.1 Ensembl	susScr11	Sscrofa11.1
Sscrofa11.1	15	95,656,206 - 95,764,099 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	106,914,582 - 106,960,243 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	15	107,069,138 - 107,073,997 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STAT4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mChlSab1.0.hap1	10	78,348,460 - 78,472,626 (-)	NCBI		mChlSab1.0.hap1
Vero_WHO_p1.0	NW_023666040	122,773,405 - 122,923,766 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0
ChlSab1.1	10	76,553,626 - 76,708,540 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	76,553,606 - 76,674,928 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

Stat4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624854	4,975,724 - 5,056,940 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2
HetGla_female_1.0 Ensembl	NW_004624854	4,976,507 - 5,057,391 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl	3	56,405,327 - 56,490,541 (+)	Ensembl

Stat4
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	123,316,367 - 123,426,390 (-)	NCBI	Rrattus_CSIRO_v1	Rrattus_CSIRO_v1

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005324363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005324364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005324365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040294610	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040294611	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040294612	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040294613	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040294614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040294616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_078017759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JBPVTT010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000019733 ⟹ ENSSTOP00000016264

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936506	7,095,009 - 7,184,689 (+)	Ensembl

RefSeq Acc Id:

XM_005324364 ⟹ XP_005324421

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
mIctTri1.hap1	7	156,651,620 - 156,745,658 (-)	NCBI
HiC_Itri_2	NW_024405303	149,652,139 - 149,746,114 (-)	NCBI
SpeTri2.0	NW_004936506	7,091,982 - 7,185,938 (+)	NCBI

Sequence:

show sequence

GCAGGGCTACTCAGGGAGAGTAAGAGGATGCTGTCCAGTGAGGGTAGACACGGGTGACCTAAAC
AGGAGTTGGCCCAAACCTCTGGGTGAGGCTGACCTCCTCCAACTAAGCAGACTCTGCTGGAATT
TTAGTTCAGTGAGGTTTATGTGTTTGGTGTGTTGATCCTGGCTACTTATCGGTTCCATCCCAAG
GGCTGGCTCACCTGGGTGAGTGGAGTCAGATACTGGGAAGATAGCGAGCCAAGGAGTTGGGCTC
CAGCATGACTCAGTGGAATCAAGTCCAACAGTTAGAAATTAAGTTTTTGGAGCAAGTAGATCAA
TTTTATGATGACAACTTTCCTATGGAAATACGACATCTGCTGGCCCAGTGGATTGAAAATCAAG
ACTGGGAAGCAGCTTCTAACAATGAAACCATGGCAACAATTCTTCTTCAAAACTTGTTGATACA
ACTGGATGATCAGTTAGGTCGTGTTTCCAAAGAGAAAAACCTGCTCTTGATACATAACCTAAAA
AGAATCAGGAAAGTCCTTCAGGGAAAATTTCATGGAAATCCAATGCATGTAGCTGTGGTTATTT
CAAACTGTTTAAGGGAAGAGAGGAGAATATTGGCTGCAGCCAACATGCCTGTCCAGGGACCTCT
GGAGAAATCCTTACAAAGTTCTTCAGTTTCAGAAAGACAGAGGAATGTGGAGCACAAAGTGTCT
GCCATTAAAAACAGTGTGCAGATGACAGAACAAGATGCCAAATACCTAGAAGACCTTCAAGATG
AATTTGACTACAGGTATAAAACAATTCAGACAATGGATCAGAGTGACAAAAATAATGCCCTGAT
GAATCAGGAAGTGTTGACGCTGCAAGAAATGCTTAATAGCCTGGACTTTAAGAGAAAGGAAACA
CTCAGCAAGATGACACAGATAGTAAATGAAACAGACTTGCTCATGAACAGCATGCTGATAGAGG
AGCTACAGGACTGGAAGAGGCGACAGCAGATTGCCTGCATAGGAGGTCCACTCCACAACGGGCT
GGACCAACTTCAAAACTGCTTTACCCTATTGGCAGAAAGTCTCTTCCAACTCAGAAGGCAATTG
GAGAAGTTAGAGGAACAATCTACCAAAATGACATATGAAGGTGACCCTATCCCACTGCAAAGAA
TGCACCTGCTAGAAAGAGTGACCTTCTTAATCTACAACCTTTTCAAGAATTCATTTGTGGTTGA
GCGACAGCCGTGCATGCCAACCCACCCTCAGAGGCCGATGGTACTTAAAACCCTCATTCAGTTC
ACTGTAAAACTAAGACTACTAATAAAATTGCCAGAACTAAACTATCAGGTAAAGGTTAAAGCAT
CAATTGACAAGAATGTTTCAACTCTAAGCAATCGAAGATTTGTCCTTTGTGGAACTCATGTCAA
AGCCATGTCCATTGAAGAATCTTCCAATGGGAGTCTCTCAGTAGAATTTAGACATTTGCAACCA
AAGGAAATGAAGTCCAGTGCTGGAAGTAAAGGAAATGAGGGCTGTCACATGGTGACTGAGGAGC
TTCATTCCATAACCTTTGAGACACAGATCTGCCTCTATGGCCTGACCATTGATTTGGAGACCAG
CTCATTACCTGTGGTGATGATTTCCAATGTCAGCCAGTTACCTAACGCATGGGCATCTATCATT
TGGTACAATGTGTCAACCAATGATTCCCAGAACTTGGTTTTCTTTAATAATCCTCCATCTGCCA
CTTTGAGTCAACTCCTGGAAGTGATGAGCTGGCAGTTTTCATCATATGTTGGTCGTGGCCTTAA
TTCAGATCAACTCAATATGCTGGCAGAGAAGCTTACAGTCCAATCCAACTACAGTGATGGTCAC
CTCAGCTGGGCCAAGTTCTGCAAGGAACACTTACCTGGTAAATCATTTACCTTTTGGACATGGC
TTGAAGCCATACTGGACCTGATTAAGAAACACATTCTTCCTCTTTGGATTGATGGGTATGTCAT
GGGCTTCGTTAGCAAAGAAAAGGAACGGCTCCTGCTCAAGGACAAAATGCCTGGGACCTTTTTA
TTAAGATTCAGTGAAAGCCATCTTGGAGGAATAACTTTCACCTGGGTGGACCACTCTGAAAACG
GAGAAGTACGATTCCACTCTGTAGAACCCTACAACAAAGGCCGGTTGTCTGCTCTGCCATTTGC
TGACATCCTTCGAGACTACAAGGTTATCATGGCTGAAAACATTCCAGAAAACCCTCTGAAGTAC
CTATATCCTGACATTCCCAAAGACAAAGCCTTTGGTAAACACTACAGCTCCCAGCCATGCGAGG
TTGCAAGACCAACAGAGAGGGGAGACAAAGGTTATGTTCCTTCCGTTTTTATCCCCATTTCAAC
AATCCGAAGTGATTCCACTGAGCCACAGTCTCCATCAGACCTTCTTCCCATGTCTCCAAGTGTA
TATGCAGTGTTGAGAGAAAATCTGAGTCCTGCAACGATTGAAACTGCAATGAAATCTCCTTATT
CTGCTGAATGATAGTATAAACTCTGACAGCCCAAAGAAGGAAGCAAACGAAAAAGTTCAAAGAC
CGTTCTTCACTAAAGACCACATGTAATTTCTTCAGCCTTGTAAATACCGATTTGTAGGAAATGT
TAGAAGTCTGAAGCTCCTCTCTCTCTGGCAACACAACTACAAATGGGAATGTTGTGAATGAAAT
GCTAAAACCCCAAACTTCAGATAAACTTACAAGATAAGACAACTTTA

hide sequence

RefSeq Acc Id:

XM_078017759 ⟹ XP_077873885

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
mIctTri1.hap1	7	156,651,620 - 156,745,414 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005324421	(Get FASTA)	NCBI Sequence Viewer
	XP_077873885	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000016264.2
GenBank Protein	KAG3274894	(Get FASTA)	NCBI Sequence Viewer
	KAG3274895	(Get FASTA)	NCBI Sequence Viewer
	KAG3274896	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005324421 ⟸ XM_005324364

- UniProtKB:

I3MVW9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNLLIQL
DDQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILAAANMPVQGPLE
KSLQSSSVSERQRNVEHKVSAIKNSVQMTEQDAKYLEDLQDEFDYRYKTIQTMDQSDKNNALMN
QEVLTLQEMLNSLDFKRKETLSKMTQIVNETDLLMNSMLIEELQDWKRRQQIACIGGPLHNGLD
QLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPLQRMHLLERVTFLIYNLFKNSFVVER
QPCMPTHPQRPMVLKTLIQFTVKLRLLIKLPELNYQVKVKASIDKNVSTLSNRRFVLCGTHVKA
MSIEESSNGSLSVEFRHLQPKEMKSSAGSKGNEGCHMVTEELHSITFETQICLYGLTIDLETSS
LPVVMISNVSQLPNAWASIIWYNVSTNDSQNLVFFNNPPSATLSQLLEVMSWQFSSYVGRGLNS
DQLNMLAEKLTVQSNYSDGHLSWAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMG
FVSKEKERLLLKDKMPGTFLLRFSESHLGGITFTWVDHSENGEVRFHSVEPYNKGRLSALPFAD
ILRDYKVIMAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEVARPTERGDKGYVPSVFIPISTI
RSDSTEPQSPSDLLPMSPSVYAVLRENLSPATIETAMKSPYSAE

hide sequence

Ensembl Acc Id:

ENSSTOP00000016264 ⟸ ENSSTOT00000019733

RefSeq Acc Id:	XP_077873885 ⟸ XM_078017759
- UniProtKB:	I3MVW9 (UniProtKB/TrEMBL)

Protein Domains

SH2

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000027217	Ensembl, UniProtKB/TrEMBL
	ENSSTOG00015009064	ENTREZGENE
Ensembl Transcript	ENSSTOT00000019733.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.532.10	UniProtKB/TrEMBL
	2.60.40.630	UniProtKB/TrEMBL
	3.30.505.10	UniProtKB/TrEMBL
	EF-hand	UniProtKB/TrEMBL
	STAT transcription factor, all-alpha domain	UniProtKB/TrEMBL
InterPro	p53-like_TF_DNA-bd	UniProtKB/TrEMBL
	SH2	UniProtKB/TrEMBL
	SH2_dom_sf	UniProtKB/TrEMBL
	STAT	UniProtKB/TrEMBL
	STAT4	UniProtKB/TrEMBL
	STAT4_CCD	UniProtKB/TrEMBL
	STAT4_SH2	UniProtKB/TrEMBL
	STAT_linker	UniProtKB/TrEMBL
	STAT_N_sf	UniProtKB/TrEMBL
	STAT_TF_alpha	UniProtKB/TrEMBL
	STAT_TF_coiled-coil	UniProtKB/TrEMBL
	STAT_TF_DNA-bd	UniProtKB/TrEMBL
	STAT_TF_DNA-bd_N	UniProtKB/TrEMBL
	STAT_TF_prot_interaction	UniProtKB/TrEMBL
NCBI Gene	Stat4	ENTREZGENE
PANTHER	PTHR11801	UniProtKB/TrEMBL
Pfam	SH2	UniProtKB/TrEMBL
	STAT_alpha	UniProtKB/TrEMBL
	STAT_bind	UniProtKB/TrEMBL
	STAT_int	UniProtKB/TrEMBL
	STAT_linker	UniProtKB/TrEMBL
PROSITE	SH2	UniProtKB/TrEMBL
SMART	STAT_int	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47655	UniProtKB/TrEMBL
	SSF48092	UniProtKB/TrEMBL
	SSF49417	UniProtKB/TrEMBL
	SSF55550	UniProtKB/TrEMBL
UniProt	I3MVW9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)