Symbol:
Stat4
Name:
signal transducer and activator of transcription 4
RGD ID:
12655590
Description:
ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); hematopoietic stem cell homeostasis (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); autoimmune hepatitis (ortholog); Behcet's disease (ortholog); FOUND IN cytoplasm (inferred); nuclear body (inferred); nucleoplasm (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
signal transducer and activator of transcription 4, transcript variant X1; signal transducer and activator of transcription 4, transcript variant X2; signal transducer and activator of transcription 4, transcript variant X3
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405303 149,652,139 - 149,767,224 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936506 7,095,009 - 7,184,689 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936506 7,091,982 - 7,185,938 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Annotations - PID (archival)
Stat4 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405303 149,652,139 - 149,767,224 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936506 7,095,009 - 7,184,689 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936506 7,091,982 - 7,185,938 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
STAT4 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 2 191,029,576 - 191,151,596 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 2 191,029,576 - 191,178,435 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 2 191,894,302 - 192,016,322 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 2 191,602,551 - 191,724,170 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 2 191,719,811 - 191,841,431 NCBI Celera 2 185,488,908 - 185,610,548 (-) NCBI Celera Cytogenetic Map 2 q32.2-q32.3 NCBI HuRef 2 183,753,956 - 183,875,743 (-) NCBI HuRef CHM1_1 2 191,900,128 - 192,022,113 (-) NCBI CHM1_1 T2T-CHM13v2.0 2 191,518,699 - 191,663,236 (-) NCBI T2T-CHM13v2.0
Stat4 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 1 52,026,265 - 52,146,348 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 1 52,026,307 - 52,146,348 (+) Ensembl GRCm39 Ensembl GRCm38 1 51,987,106 - 52,107,189 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 1 51,987,148 - 52,107,189 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 1 52,065,088 - 52,164,028 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 1 51,952,789 - 52,051,729 (+) NCBI MGSCv36 mm8 Celera 1 52,546,764 - 52,645,629 (+) NCBI Celera Cytogenetic Map 1 C1.1 NCBI cM Map 1 26.67 NCBI
Stat4 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 9 56,964,617 - 57,080,523 (-) NCBI GRCr8 mRatBN7.2 9 49,472,660 - 49,588,540 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 9 49,419,340 - 49,588,540 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 9 58,021,896 - 58,130,745 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 9 63,144,732 - 63,253,572 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 9 61,440,716 - 61,549,562 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 9 54,340,649 - 54,457,753 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 9 54,287,541 - 54,484,533 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 9 54,051,154 - 54,167,491 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 9 46,510,251 - 46,650,076 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 9 46,511,665 - 46,651,490 (-) NCBI Celera 9 47,135,713 - 47,243,684 (-) NCBI Celera Cytogenetic Map 9 q22 NCBI
Stat4 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955403 8,061,471 - 8,144,276 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955403 8,061,471 - 8,144,252 (+) NCBI ChiLan1.0 ChiLan1.0
STAT4 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 13 93,711,969 - 93,930,627 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 2B 93,727,052 - 93,945,611 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 2B 78,331,402 - 78,549,231 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 2B 196,247,617 - 196,394,154 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 2B 196,247,881 - 196,366,011 (-) Ensembl panpan1.1 panPan2
STAT4 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 37 1,566,563 - 1,685,378 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 37 1,566,585 - 1,829,894 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 37 2,514,598 - 2,633,404 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 37 1,453,968 - 1,572,676 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 37 1,453,990 - 1,550,821 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 37 1,463,313 - 1,581,898 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 37 1,431,241 - 1,549,848 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 37 1,459,885 - 1,578,875 (-) NCBI UU_Cfam_GSD_1.0
STAT4 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 15 95,656,077 - 95,763,472 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 15 95,656,206 - 95,764,099 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 15 106,914,582 - 106,960,243 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3 Sscrofa10.2 15 107,069,138 - 107,073,997 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
STAT4 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 10 76,553,626 - 76,708,540 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 10 76,553,606 - 76,674,928 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666040 122,773,405 - 122,923,766 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Stat4
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSSTOT00000019733 ⟹ ENSSTOP00000016264
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source SpeTri2.0 Ensembl NW_004936506 7,095,009 - 7,184,689 (+) Ensembl
RefSeq Acc Id:
XM_005324364 ⟹ XP_005324421
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405303 149,652,139 - 149,746,114 (-) NCBI SpeTri2.0 NW_004936506 7,091,982 - 7,185,938 (+) NCBI
Sequence:
GCAGGGCTACTCAGGGAGAGTAAGAGGATGCTGTCCAGTGAGGGTAGACACGGGTGACCTAAACAGGAGTTGGCCCAAACCTCTGGGTGAGGCTGACCTCCTCCAACTAAGCAGACTCTGCTGGAATT
hide sequence
RefSeq Acc Id:
XM_040294610 ⟹ XP_040150544
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405303 149,652,139 - 149,767,224 (-) NCBI
RefSeq Acc Id:
XM_040294611 ⟹ XP_040150545
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405303 149,652,139 - 149,767,224 (-) NCBI
RefSeq Acc Id:
XM_040294612 ⟹ XP_040150546
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405303 149,652,139 - 149,764,231 (-) NCBI
RefSeq Acc Id:
XM_040294613 ⟹ XP_040150547
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405303 149,652,139 - 149,767,186 (-) NCBI
RefSeq Acc Id:
XM_040294614 ⟹ XP_040150548
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405303 149,652,139 - 149,764,210 (-) NCBI
RefSeq Acc Id:
XM_040294616 ⟹ XP_040150550
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024405303 149,652,139 - 149,741,271 (-) NCBI
RefSeq Acc Id:
XP_005324421 ⟸ XM_005324364
- Peptide Label:
isoform X1
- UniProtKB:
I3MVW9 (UniProtKB/TrEMBL)
- Sequence:
MTQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNLLIQLDDQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILAAANMPVQGPLE
hide sequence
RefSeq Acc Id:
XP_040150544 ⟸ XM_040294610
- Peptide Label:
isoform X1
- UniProtKB:
I3MVW9 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_040150545 ⟸ XM_040294611
- Peptide Label:
isoform X1
- UniProtKB:
I3MVW9 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_040150547 ⟸ XM_040294613
- Peptide Label:
isoform X1
- UniProtKB:
I3MVW9 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_040150546 ⟸ XM_040294612
- Peptide Label:
isoform X1
- UniProtKB:
I3MVW9 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_040150548 ⟸ XM_040294614
- Peptide Label:
isoform X1
- UniProtKB:
I3MVW9 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_040150550 ⟸ XM_040294616
- Peptide Label:
isoform X2
- UniProtKB:
I3MVW9 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSSTOP00000016264 ⟸ ENSSTOT00000019733
