Myh9 (myosin heavy chain 9) - Rat Genome Database

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Gene: Myh9 (myosin heavy chain 9) Chinchilla lanigera
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Symbol: Myh9
Name: myosin heavy chain 9
RGD ID: 8944101
Description: ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ADP binding (ortholog); INVOLVED IN actin cytoskeleton reorganization (ortholog); actin filament bundle assembly (ortholog); actin filament bundle distribution (ortholog); PARTICIPATES IN follicle-stimulating hormone signaling pathway; ASSOCIATED WITH AIDS-Associated Nephropathy (ortholog); Albuminuria (ortholog); Alport syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); actomyosin (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: myosin, heavy chain 9, non-muscle; myosin-9
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541322,881,045 - 22,972,450 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541322,881,759 - 22,972,182 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
actin cytoskeleton reorganization  (ISO)
actin filament bundle assembly  (ISO)
actin filament bundle distribution  (ISO)
actin filament capping  (ISO)
actin filament polymerization  (ISO)
actin filament-based movement  (ISO)
actomyosin structure organization  (ISO)
angiogenesis  (ISO)
blood vessel endothelial cell migration  (ISO)
cell adhesion  (ISO)
cell morphogenesis involved in differentiation  (ISO)
cell-cell adhesion  (ISO)
cellular response to mechanical stimulus  (ISO)
cellular response to platelet-derived growth factor stimulus  (ISO)
cortical granule exocytosis  (ISO)
cytokinetic process  (ISO)
establishment of meiotic spindle localization  (ISO)
establishment of T cell polarity  (ISO)
follicle-stimulating hormone signaling pathway  (ISO)
in utero embryonic development  (ISO)
lysosome localization  (ISO)
meiotic spindle organization  (ISO)
membrane protein ectodomain proteolysis  (ISO)
monocyte differentiation  (ISO)
myoblast fusion  (ISO)
negative regulation of actin filament severing  (ISO)
negative regulation of vascular associated smooth muscle cell migration  (ISO)
phagocytosis, engulfment  (ISO)
plasma membrane repair  (ISO)
platelet aggregation  (ISO)
platelet formation  (ISO)
positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway  (ISO)
positive regulation of endocytosis  (ISO)
positive regulation of ERK1 and ERK2 cascade  (ISO)
positive regulation of focal adhesion assembly  (ISO)
positive regulation of G protein-coupled receptor signaling pathway  (ISO)
positive regulation of inositol trisphosphate biosynthetic process  (ISO)
positive regulation of insulin secretion involved in cellular response to glucose stimulus  (ISO)
positive regulation of phagocytosis  (ISO)
positive regulation of protein processing in phagocytic vesicle  (ISO)
protein transport  (ISO)
regulated exocytosis  (ISO)
regulation of cell shape  (ISO)
regulation of plasma membrane repair  (ISO)
uropod organization  (ISO)
vesicle targeting  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Myh9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541322,881,045 - 22,972,450 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541322,881,759 - 22,972,182 (-)NCBIChiLan1.0ChiLan1.0
MYH9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2236,281,280 - 36,387,967 (-)EnsemblGRCh38hg38GRCh38
GRCh382236,281,280 - 36,387,967 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372236,677,326 - 36,784,012 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362235,007,272 - 35,113,927 (-)NCBINCBI36hg18NCBI36
Build 342235,001,826 - 35,108,481NCBI
Celera2220,479,895 - 20,586,681 (-)NCBI
Cytogenetic Map22q12.3NCBI
HuRef2219,645,404 - 19,752,216 (-)NCBIHuRef
CHM1_12236,636,447 - 36,743,196 (-)NCBICHM1_1
Myh9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391577,644,785 - 77,726,375 (-)NCBIGRCm39mm39
GRCm39 Ensembl1577,644,787 - 77,726,375 (-)Ensembl
GRCm381577,760,585 - 77,842,175 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1577,760,587 - 77,842,175 (-)EnsemblGRCm38mm10GRCm38
MGSCv371577,591,019 - 77,672,545 (-)NCBIGRCm37mm9NCBIm37
MGSCv361577,587,843 - 77,669,360 (-)NCBImm8
Celera1579,227,040 - 79,308,545 (-)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1536.81NCBI
Myh9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.27109,343,718 - 109,424,457 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl7109,343,706 - 109,424,457 (-)Ensembl
Rnor_6.07118,740,005 - 118,792,507 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7118,741,110 - 118,792,625 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl7118,992,356 - 119,071,712 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07118,737,555 - 118,797,086 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47115,681,459 - 115,732,774 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17115,715,686 - 115,767,004 (-)NCBI
Celera7105,684,430 - 105,736,878 (-)NCBICelera
RH 3.4 Map7811.2RGD
Cytogenetic Map7q34NCBI
MYH9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12235,039,461 - 35,121,618 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2235,039,101 - 35,121,618 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02217,200,623 - 17,305,826 (-)NCBIMhudiblu_PPA_v0panPan3
MYH9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11028,063,626 - 28,122,953 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1028,063,624 - 28,122,953 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1027,985,072 - 28,076,495 (+)NCBI
ROS_Cfam_1.01028,817,559 - 28,909,010 (+)NCBI
UMICH_Zoey_3.11028,544,285 - 28,635,641 (+)NCBI
UNSW_CanFamBas_1.01028,853,021 - 28,944,583 (+)NCBI
UU_Cfam_GSD_1.01029,031,010 - 29,122,482 (+)NCBI
Myh9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494511,373,869 - 11,455,815 (+)NCBI
SpeTri2.0NW_0049364924,384,215 - 4,466,229 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYH9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1511,365,603 - 11,456,475 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.259,076,302 - 9,165,918 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MYH9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11918,985,709 - 19,093,304 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1918,986,598 - 19,052,671 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666045106,805,704 - 106,913,198 (+)NCBIVero_WHO_p1.0
Myh9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475211,327,881 - 11,414,037 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000023304   ⟹   ENSCLAP00000023086
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541322,881,045 - 22,972,450 (-)Ensembl
RefSeq Acc Id: XM_005379158   ⟹   XP_005379215
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541322,881,759 - 22,972,182 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013511492   ⟹   XP_013366946
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541322,881,759 - 22,950,636 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005379215 (Get FASTA)   NCBI Sequence Viewer  
  XP_013366946 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005379215   ⟸   XM_005379158
- Sequence:
RefSeq Acc Id: XP_013366946   ⟸   XM_013511492
- Sequence:
RefSeq Acc Id: ENSCLAP00000023086   ⟸   ENSCLAT00000023304


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000015848 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000023086 ENTREZGENE
Ensembl Transcript ENSCLAT00000023304 ENTREZGENE
NCBI Gene Myh9 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-09 Myh9  myosin heavy chain 9    myosin, heavy chain 9, non-muscle  Symbol and/or name change 5135510 APPROVED