Zbtb32 (zinc finger and BTB domain containing 32) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Zbtb32 (zinc finger and BTB domain containing 32) Chinchilla lanigera
Analyze
Symbol: Zbtb32
Name: zinc finger and BTB domain containing 32
RGD ID: 10187399
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN hemopoiesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of cytokine production (ortholog); ASSOCIATED WITH Brugada syndrome 5 (ortholog); COVID-19 (ortholog); dystonia (ortholog); FOUND IN nuclear chromosome (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: zinc finger and BTB domain-containing protein 32
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554682,834,832 - 2,844,258 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Zbtb32
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554682,834,832 - 2,844,258 (-)NCBIChiLan1.0ChiLan1.0
ZBTB32
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381935,704,558 - 35,717,038 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1935,704,558 - 35,717,038 (+)EnsemblGRCh38hg38GRCh38
GRCh371936,195,460 - 36,207,940 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361940,895,670 - 40,899,780 (+)NCBINCBI36Build 36hg18NCBI36
Celera1932,917,304 - 32,921,414 (+)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1932,708,667 - 32,712,777 (+)NCBIHuRef
CHM1_11936,205,270 - 36,209,380 (+)NCBICHM1_1
T2T-CHM13v2.01938,249,885 - 38,262,352 (+)NCBIT2T-CHM13v2.0
Zbtb32
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39730,289,105 - 30,302,244 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl730,289,106 - 30,298,334 (-)EnsemblGRCm39 Ensembl
GRCm38730,589,680 - 30,602,819 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,589,681 - 30,598,909 (-)EnsemblGRCm38mm10GRCm38
MGSCv37731,374,700 - 31,377,961 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36730,298,441 - 30,300,663 (-)NCBIMGSCv36mm8
Celera725,181,236 - 25,184,497 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map718.72NCBI
Zbtb32
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8194,969,374 - 94,978,553 (-)NCBIGRCr8
mRatBN7.2185,841,931 - 85,851,116 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl185,841,931 - 85,844,236 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx191,258,641 - 91,260,946 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0199,724,806 - 99,727,111 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0193,016,922 - 93,019,227 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0189,043,121 - 89,052,863 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl189,043,086 - 89,045,586 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0190,197,757 - 90,206,863 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4185,635,284 - 85,637,589 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera180,213,494 - 80,215,799 (-)NCBICelera
Cytogenetic Map1q21NCBI
ZBTB32
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22041,697,806 - 41,711,710 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11943,683,118 - 43,696,649 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01932,633,923 - 32,647,675 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11941,368,960 - 41,381,634 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1941,369,043 - 41,381,634 (+)Ensemblpanpan1.1panPan2
ZBTB32
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11116,914,597 - 116,923,923 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1116,914,606 - 116,917,107 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1116,319,793 - 116,329,112 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01117,517,510 - 117,526,830 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1117,517,799 - 117,519,921 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11117,080,876 - 117,090,191 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01116,704,507 - 116,713,823 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01117,759,881 - 117,769,220 (-)NCBIUU_Cfam_GSD_1.0
Zbtb32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934911,030,378 - 11,039,795 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936570606,087 - 615,473 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZBTB32
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl645,142,262 - 45,145,898 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1645,140,573 - 45,145,903 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2640,597,147 - 40,601,346 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZBTB32
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1630,609,096 - 30,625,664 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl630,623,252 - 30,625,386 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660738,403,862 - 8,417,251 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zbtb32
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462479410,012,622 - 10,022,493 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_013522396   ⟹   XP_013377850
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554682,834,832 - 2,844,257 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522397   ⟹   XP_013377851
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554682,834,832 - 2,844,127 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522398   ⟹   XP_013377852
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554682,834,832 - 2,844,257 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522399   ⟹   XP_013377853
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554682,834,832 - 2,844,257 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522400   ⟹   XP_013377854
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554682,834,832 - 2,844,257 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522401   ⟹   XP_013377855
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554682,834,832 - 2,844,127 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522402   ⟹   XP_013377856
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554682,834,832 - 2,844,258 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522403   ⟹   XP_013377857
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554682,834,832 - 2,844,257 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522405   ⟹   XP_013377859
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554682,834,832 - 2,844,128 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522406   ⟹   XP_013377860
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554682,834,832 - 2,844,256 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_013377856   ⟸   XM_013522402
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013377853   ⟸   XM_013522399
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013377857   ⟸   XM_013522403
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013377854   ⟸   XM_013522400
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013377852   ⟸   XM_013522398
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013377850   ⟸   XM_013522396
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013377860   ⟸   XM_013522406
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013377859   ⟸   XM_013522405
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013377855   ⟸   XM_013522401
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013377851   ⟸   XM_013522397
- Peptide Label: isoform X1
- Sequence:
Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000014824 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000021861.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene Zbtb32 ENTREZGENE
PANTHER ZINC FINGER AND BTB DOMAIN-CONTAINING UniProtKB/TrEMBL
  ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 32 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-met UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A8C2W0Z5_CHILA UniProtKB/TrEMBL