Gpr183 (G protein-coupled receptor 183) - Rat Genome Database

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Gene: Gpr183 (G protein-coupled receptor 183) Chinchilla lanigera
Analyze
Symbol: Gpr183
Name: G protein-coupled receptor 183
RGD ID: 9057048
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); oxysterol binding (ortholog); INVOLVED IN adaptive immune response (ortholog); cell chemotaxis (ortholog); dendritic cell chemotaxis (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Anal Atresia, Hypospadias, and Penoscrotal Inversion (ortholog); holoprosencephaly (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: G-protein coupled receptor 183
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540411,264,954 - 11,277,531 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540411,264,954 - 11,277,531 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISS annotations to Chinchilla, Squirrel, Bonobo and/or Dog genes from Human gene annotations

Genomics

Comparative Map Data
Gpr183
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540411,264,954 - 11,277,531 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540411,264,954 - 11,277,531 (+)NCBIChiLan1.0ChiLan1.0
GPR183
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381399,294,539 - 99,307,399 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1399,294,539 - 99,307,399 (-)EnsemblGRCh38hg38GRCh38
GRCh371399,946,793 - 99,959,653 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361398,744,790 - 98,757,695 (-)NCBINCBI36hg18NCBI36
Build 341398,744,790 - 98,757,695NCBI
Celera1380,790,353 - 80,803,314 (-)NCBI
Cytogenetic Map13q32.3NCBI
HuRef1380,541,169 - 80,554,130 (-)NCBIHuRef
CHM1_11399,916,965 - 99,929,926 (-)NCBICHM1_1
T2T-CHM13v2.01398,504,775 - 98,517,640 (-)NCBI
Gpr183
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914122,189,743 - 122,202,605 (-)NCBIGRCm39mm39
GRCm39 Ensembl14122,189,963 - 122,202,607 (-)Ensembl
GRCm3814121,952,331 - 121,965,193 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14121,952,551 - 121,965,195 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714122,351,553 - 122,364,415 (-)NCBIGRCm37mm9NCBIm37
MGSCv3614121,087,511 - 121,100,373 (-)NCBImm8
Celera14120,513,847 - 120,526,678 (-)NCBICelera
Cytogenetic Map14E5NCBI
Gpr183
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21599,037,764 - 99,050,550 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1599,036,367 - 99,050,559 (-)Ensembl
Rnor_6.015108,364,701 - 108,376,221 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl15108,364,701 - 108,376,221 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.015111,751,148 - 111,763,869 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.415107,056,367 - 107,067,887 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1597,811,478 - 97,823,000 (-)NCBICelera
Cytogenetic Map15q25NCBI
GPR183
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11399,600,695 - 99,613,671 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1399,601,220 - 99,602,305 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01380,461,908 - 80,475,046 (-)NCBIMhudiblu_PPA_v0panPan3
GPR183
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12249,332,665 - 49,347,721 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2249,333,188 - 49,347,593 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2249,113,865 - 49,128,934 (-)NCBI
ROS_Cfam_1.02249,773,993 - 49,789,040 (-)NCBI
ROS_Cfam_1.0 Ensembl2249,774,006 - 49,789,026 (-)Ensembl
UMICH_Zoey_3.12249,425,293 - 49,440,355 (-)NCBI
UNSW_CanFamBas_1.02249,459,634 - 49,474,711 (-)NCBI
UU_Cfam_GSD_1.02249,495,775 - 49,510,831 (-)NCBI
Gpr183
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945184,753,026 - 184,765,923 (-)NCBI
SpeTri2.0NW_00493647211,196,567 - 11,198,890 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR183
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1168,231,224 - 68,245,751 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11168,231,851 - 68,248,627 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21175,527,987 - 75,529,869 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GPR183
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1377,952,689 - 77,966,317 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl377,953,212 - 77,954,297 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604634,448,232 - 34,461,198 (-)NCBIVero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000005911   ⟹   ENSCLAP00000005810
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540411,264,954 - 11,277,531 (+)Ensembl
RefSeq Acc Id: XM_005374064   ⟹   XP_005374121
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540411,264,954 - 11,277,531 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005374121 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005374121   ⟸   XM_005374064
- Sequence:
RefSeq Acc Id: ENSCLAP00000005810   ⟸   ENSCLAT00000005911
Protein Domains
G_PROTEIN_RECEP_F1_2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000004120 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000005810 ENTREZGENE
  ENSCLAP00000005810.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000005911 ENTREZGENE
  ENSCLAT00000005911.1 UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
NCBI Gene Gpr183 ENTREZGENE
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
UniProt A0A8C2UUR9_CHILA UniProtKB/TrEMBL