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ONTOLOGY REPORT - ANNOTATIONS


Term:condensed chromosome
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Accession:GO:0000793 term browser browse the term
Definition:A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
Comment:Note that this term can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes an 'open mitosis' in which the nuclear envelope breaks down during mitosis.
Synonyms:related_synonym: cytoplasmic mitotic chromosome;   metaphase chromosome;   mitotic chromosome


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condensed chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8 A-kinase anchoring protein 8 ISO (MGI:MGI:3512088|PMID:12082153) RGD PMID:12082153 MGI:MGI:3512088 NCBI chr 7:14,323,298...14,339,953
Ensembl chr 7:14,324,104...14,351,918
JBrowse link
G Aurkc aurora kinase C ISO (PMID:15670791) RGD PMID:15670791 NCBI chr 1:69,958,452...69,964,546
Ensembl chr 1:69,958,452...69,963,592
JBrowse link
G Banf1 BAF nuclear assembly factor 1 IDA RGD PMID:10393804 RGD:10054037 NCBI chr 1:220,744,195...220,746,224
Ensembl chr 1:220,744,195...220,746,224
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain, 1B ISO (MGI:MGI:2179578|PMID:11980720) RGD PMID:11980720 MGI:MGI:2179578 NCBI chr12:24,478,882...24,536,851
Ensembl chr12:24,478,898...24,537,313
JBrowse link
G Brca1 BRCA1, DNA repair associated ISO (MGI:MGI:2671746|PMID:12913077) RGD PMID:12913077 MGI:MGI:2671746 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO
IEA
(MGI:MGI:3757893|PMID:17784788)
GO_REF:0000107
RGD
Ensembl
PMID:17784788 GO_REF:0000107, MGI:MGI:3757893 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 ISO (PMID:21063390) RGD PMID:21063390 NCBI chr16:80,839,373...80,850,340
Ensembl chr16:80,839,374...80,850,340
JBrowse link
G Ctcf CCCTC-binding factor ISO
IEA
(PMID:16107875)
GO_REF:0000107
RGD
Ensembl
PMID:16107875 GO_REF:0000107 NCBI chr19:37,600,151...37,649,674
Ensembl chr19:37,600,148...37,649,673
JBrowse link
G Esrrb estrogen-related receptor beta ISO
ISS
(MGI:MGI:5823092|PMID:27723719)
GO_REF:0000024
RGD
UniProt
PMID:27723719 GO_REF:0000024, MGI:MGI:5823092 NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
JBrowse link
G Fancd2 FA complementation group D2 ISO
IBA
IEA
(MGI:MGI:2671746|PMID:12913077)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:12913077, PMID:21873635 GO_REF:0000107, MGI:MGI:2671746, RGD:13792537 NCBI chr 4:145,489,869...145,551,479
Ensembl chr 4:145,489,869...145,551,479
JBrowse link
G Hmbs hydroxymethylbilane synthase colocalizes_with IDA strong staining of metaphase and anaphase chromatids RGD PMID:12917623 RGD:2301689 NCBI chr 8:48,667,278...48,674,673
Ensembl chr 8:48,667,275...48,674,748
JBrowse link
G Hmgb1 high mobility group box 1 ISO (PMID:12925773) RGD PMID:12925773 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgb2 high mobility group box 2 ISO
ISS
(PMID:12925773)
GO_REF:0000024
RGD
UniProt
PMID:12925773 GO_REF:0000024 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:49,708,038...49,709,128
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Incenp inner centromere protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:225,923,448...225,953,384
Ensembl chr 1:225,925,773...225,952,516
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 ISO (PMID:10445843) RGD PMID:10445843 NCBI chr 3:159,316,580...159,348,914
Ensembl chr 3:159,321,310...159,347,631
JBrowse link
G Lig4 DNA ligase 4 ISO (PMID:12589063) RGD PMID:12589063 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G Macroh2a1 macroH2A.1 histone ISO (MGI:MGI:2181919|PMID:12082075) RGD PMID:12082075 MGI:MGI:2181919 NCBI chr17:9,282,109...9,344,698
Ensembl chr17:9,282,675...9,344,678
JBrowse link
G Mki67 marker of proliferation Ki-67 colocalizes_with ISO (MGI:MGI:2445886|PMID:12355204)
(PMID:27362226)
RGD PMID:12355204, PMID:27362226 MGI:MGI:2445886 NCBI chr 1:207,993,895...208,020,454
Ensembl chr 1:207,993,895...208,020,454
JBrowse link
G Mlh1 mutL homolog 1 ISO MGI:MGI:1857946 (MGI:MGI:2183707|PMID:12091911), (MGI:MGI:2671746|PMID:12913077), (MGI:MGI:81751|PMID:8673133) RGD PMID:8673133, PMID:12091911, PMID:12913077 MGI:MGI:2183707, MGI:MGI:2671746, MGI:MGI:81751 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mlh3 mutL homolog 3 ISO (MGI:MGI:2183707|PMID:12091911) RGD PMID:12091911 MGI:MGI:2183707 NCBI chr 6:109,059,386...109,095,876
Ensembl chr 6:109,059,341...109,095,557
JBrowse link
G Msh4 mutS homolog 4 ISO (MGI:MGI:1858570|PMID:10809667) RGD PMID:10809667 MGI:MGI:1858570 NCBI chr 2:260,057,708...260,108,897
Ensembl chr 2:260,057,855...260,108,897
JBrowse link
G Nanog Nanog homeobox NOT ISO (MGI:MGI:5823092|PMID:27723719) RGD PMID:27723719 MGI:MGI:5823092 NCBI chr 4:155,531,906...155,539,268
Ensembl chr 4:155,531,906...155,539,268
JBrowse link
G Ncapd2 non-SMC condensin I complex, subunit D2 ISO (MGI:MGI:3512088|PMID:12082153)
(PMID:12138188)
RGD PMID:12082153, PMID:12138188 MGI:MGI:3512088 NCBI chr 4:157,682,855...157,705,903
Ensembl chr 4:157,683,077...157,704,596
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 ISO (MGI:MGI:5317363|PMID:21795393) RGD PMID:21795393 MGI:MGI:5317363 NCBI chr 8:28,075,629...28,145,024
Ensembl chr 8:28,075,551...28,144,741
JBrowse link
G Ncapg non-SMC condensin I complex, subunit G ISO
IBA
(MGI:MGI:5317363|PMID:21795393)
PMID:21873635
RGD PMID:21795393, PMID:21873635 MGI:MGI:5317363, RGD:13792537 NCBI chr14:69,898,268...69,927,885
Ensembl chr14:69,899,128...69,927,938
JBrowse link
G Ncaph2 non-SMC condensin II complex, subunit H2 ISO
IBA
(MGI:MGI:5317363|PMID:21795393)
PMID:21873635
RGD PMID:21795393, PMID:21873635 MGI:MGI:5317363, RGD:13792537 NCBI chr 7:130,326,597...130,343,655
Ensembl chr 7:130,326,600...130,342,493
JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 ISO (MGI:MGI:2445239|PMID:12237316) RGD PMID:12237316 MGI:MGI:2445239 NCBI chr14:84,211,600...84,227,980
Ensembl chr14:84,211,600...84,227,978
JBrowse link
G Rad51 RAD51 recombinase ISO (MGI:MGI:1858570|PMID:10809667), (MGI:MGI:2183707|PMID:12091911), (MGI:MGI:2652933|PMID:12591952), (MGI:MGI:2671746|PMID:12913077), (MGI:MGI:3707920|PMID:17291760) RGD PMID:10809667, PMID:12091911, PMID:12591952, PMID:12913077, PMID:17291760 MGI:MGI:1858570, MGI:MGI:2183707, MGI:MGI:2652933, MGI:MGI:2671746, MGI:MGI:3707920 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:MGI:5317363|PMID:21795393) RGD PMID:21795393 MGI:MGI:5317363 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Rif1 replication timing regulatory factor 1 ISO (PMID:15583028) RGD PMID:15583028 NCBI chr 3:37,599,540...37,648,818
Ensembl chr 3:37,599,728...37,647,631
JBrowse link
G Rpa1 replication protein A1 ISO (MGI:MGI:2183707|PMID:12091911) RGD PMID:12091911 MGI:MGI:2183707 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Setmar SET domain and mariner transposase fusion gene colocalizes_with ISO (PMID:18790802) RGD PMID:18790802 NCBI chr 4:140,092,346...140,104,495
Ensembl chr 4:140,092,352...140,105,316
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 ISO (PMID:12972596) RGD PMID:12972596 NCBI chr19:30,936,703...30,969,454
Ensembl chr19:30,936,703...30,969,454
JBrowse link
G Smc2 structural maintenance of chromosomes 2 ISO (MGI:MGI:5317363|PMID:21795393)
(PMID:12589063)
RGD PMID:12589063, PMID:21795393 MGI:MGI:5317363 NCBI chr 5:68,717,509...68,764,080
Ensembl chr 5:68,717,519...68,763,850
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO (MGI:MGI:1858570|PMID:10809667), (MGI:MGI:2183707|PMID:12091911), (MGI:MGI:2652933|PMID:12591952), (MGI:MGI:3757893|PMID:17784788), (MGI:MGI:4361070|PMID:19625504) RGD PMID:10809667, PMID:12091911, PMID:12591952, PMID:17784788, PMID:19625504 MGI:MGI:1858570, MGI:MGI:2183707, MGI:MGI:2652933, MGI:MGI:3757893, MGI:MGI:4361070 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
G Top2a DNA topoisomerase II alpha IEA
ISO
GO_REF:0000107
(MGI:MGI:2158857|PMID:11835579), (MGI:MGI:5317363|PMID:21795393)
Ensembl
RGD
PMID:11835579, PMID:21795393 GO_REF:0000107, MGI:MGI:2158857, MGI:MGI:5317363 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154
JBrowse link
G Top3b DNA topoisomerase III beta ISO (MGI:MGI:2652933|PMID:12591952) RGD PMID:12591952 MGI:MGI:2652933 NCBI chr11:88,346,305...88,374,896
Ensembl chr11:88,346,313...88,374,679
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 NOT ISO (PMID:12589063) RGD PMID:12589063 NCBI chr 2:18,674,496...18,927,463
Ensembl chr 2:18,677,220...18,927,365
JBrowse link
central element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Incenp inner centromere protein ISO (MGI:MGI:2653770|PMID:12584241) RGD PMID:12584241 MGI:MGI:2653770 NCBI chr 1:225,923,448...225,953,384
Ensembl chr 1:225,925,773...225,952,516
JBrowse link
G Six6os1 Six6 opposite strand transcript 1 ISO
IBA
(MGI:MGI:5822939|PMID:27796301)
PMID:21873635
RGD PMID:27796301, PMID:21873635 MGI:MGI:5822939, RGD:13792537 NCBI chr 6:95,761,718...95,797,314
Ensembl chr 6:95,762,332...95,796,502
JBrowse link
G Syce1 synaptonemal complex central element protein 1 ISO (MGI:MGI:3581466|PMID:15944401), (MGI:MGI:5315075|PMID:22164254) RGD PMID:15944401, PMID:22164254 MGI:MGI:3581466, MGI:MGI:5315075 NCBI chr 1:213,523,638...213,534,641
Ensembl chr 1:213,523,639...213,534,641
JBrowse link
G Syce2 synaptonemal complex central element protein 2 ISO
IBA
(MGI:MGI:3581466|PMID:15944401), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5504589|PMID:22854038)
PMID:21873635
RGD PMID:15944401, PMID:22164254, PMID:22854038, PMID:21873635 MGI:MGI:3581466, MGI:MGI:5315075, MGI:MGI:5504589, RGD:13792537 NCBI chr19:25,982,003...26,002,399
Ensembl chr19:25,983,169...26,001,317
JBrowse link
G Syce3 synaptonemal complex central element protein 3 ISO
IBA
(MGI:MGI:5008660|PMID:21637789), (MGI:MGI:5315075|PMID:22164254)
PMID:21873635
RGD PMID:21637789, PMID:22164254, PMID:21873635 MGI:MGI:5008660, MGI:MGI:5315075, RGD:13792537 NCBI chr 7:130,360,511...130,386,673
Ensembl chr 7:130,360,517...130,368,819
JBrowse link
G Sycp1 synaptonemal complex protein 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:MGI:2653770|PMID:12584241), (MGI:MGI:5470363|PMID:23133398)
Ensembl
RGD
PMID:12584241, PMID:23133398, PMID:21873635 GO_REF:0000107, MGI:MGI:2653770, MGI:MGI:5470363, RGD:13792537 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Tex11 testis expressed 11 ISO
IBA
(MGI:MGI:3774244|PMID:18316482)
PMID:21873635
RGD PMID:18316482, PMID:21873635 MGI:MGI:3774244, RGD:13792537 NCBI chr  X:70,670,212...70,946,621
Ensembl chr  X:70,670,322...70,946,565
JBrowse link
G Tex12 testis expressed 12 ISO
IBA
(MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5504589|PMID:22854038)
PMID:21873635
RGD PMID:22164254, PMID:22854038, PMID:21873635 MGI:MGI:5315075, MGI:MGI:5504589, RGD:13792537 NCBI chr 8:54,991,501...54,999,454
Ensembl chr 8:54,992,841...54,994,871
JBrowse link
checkpoint clamp complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hus1 HUS1 checkpoint clamp component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:89,194,086...89,208,825
Ensembl chr14:89,194,092...89,208,825
JBrowse link
G LOC103690165 checkpoint protein HUS1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:34,691,084...34,694,690
Ensembl chr17:34,693,597...34,694,690
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:60,461,513...60,469,646
Ensembl chr 2:60,461,551...60,469,685
JBrowse link
G Rad9a RAD9 checkpoint clamp component A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:219,443,347...219,450,574
Ensembl chr 1:219,444,092...219,450,451
JBrowse link
G Rad9b RAD9 checkpoint clamp component B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:39,699,076...39,731,218
Ensembl chr12:39,699,181...39,729,516
JBrowse link
chiasma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:MGI:3707920|PMID:17291760), (MGI:MGI:3719060|PMID:17696610), (MGI:MGI:5288570|PMID:21743440)
Ensembl
RGD
PMID:17291760, PMID:17696610, PMID:21743440, PMID:21873635 GO_REF:0000107, MGI:MGI:3707920, MGI:MGI:3719060, MGI:MGI:5288570, RGD:13792537 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mlh3 mutL homolog 3 ISO (MGI:MGI:2183707|PMID:12091911), (MGI:MGI:3719060|PMID:17696610) RGD PMID:12091911, PMID:17696610 MGI:MGI:2183707, MGI:MGI:3719060 NCBI chr 6:109,059,386...109,095,876
Ensembl chr 6:109,059,341...109,095,557
JBrowse link
cohesin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad21 RAD21 cohesin complex component ISO (PMID:11590136), (PMID:22628566)
(MGI:MGI:1340883|PMID:10375619), (MGI:MGI:5429807|PMID:22419665)
RGD PMID:10375619, PMID:11590136, PMID:22419665, PMID:22628566 MGI:MGI:1340883, MGI:MGI:5429807 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Smc1a structural maintenance of chromosomes 1A ISO (MGI:MGI:1340883|PMID:10375619)
(PMID:11590136), (PMID:22628566), (PMID:9789013)
RGD PMID:9789013, PMID:10375619, PMID:11590136, PMID:22628566 MGI:MGI:1340883 NCBI chr  X:21,710,976...21,755,708
Ensembl chr  X:21,711,019...21,755,525
JBrowse link
G Smc3 structural maintenance of chromosomes 3 ISO (MGI:MGI:1340883|PMID:10375619)
(PMID:11590136), (PMID:22628566), (PMID:9789013)
RGD PMID:9789013, PMID:10375619, PMID:11590136, PMID:22628566 MGI:MGI:1340883 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Stag1 stromal antigen 1 ISO
IBA
(PMID:11590136), (PMID:22628566)
PMID:21873635
RGD PMID:11590136, PMID:22628566, PMID:21873635 RGD:13792537 NCBI chr 8:108,958,099...109,342,738
Ensembl chr 8:108,958,046...109,342,738
JBrowse link
G Stag2 stromal antigen 2 IBA
ISO
PMID:21873635
(PMID:11590136), (PMID:29263825)
RGD PMID:11590136, PMID:29263825, PMID:21873635 RGD:13792537 NCBI chr  X:128,493,603...128,624,418
Ensembl chr  X:128,493,614...128,624,418
JBrowse link
G Stag3 stromal antigen 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
condensed chromosome inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpa centromere protein A ISO (MGI:MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:MGI:2682084 NCBI chr 6:27,072,259...27,080,863
Ensembl chr 6:27,072,166...27,080,856
JBrowse link
G Orc2 origin recognition complex, subunit 2 ISO (MGI:MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:MGI:2682084 NCBI chr 9:65,350,630...65,387,293
Ensembl chr 9:65,350,627...65,387,169
JBrowse link
condensed chromosome kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahctf1 AT hook containing transcription factor 1 colocalizes_with ISO (PMID:17098863) RGD PMID:17098863 NCBI chr13:98,023,528...98,079,138
Ensembl chr13:98,023,430...98,078,946
JBrowse link
G Anapc16 anaphase promoting complex subunit 16 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr20:29,544,626...29,558,928
Ensembl chr20:29,544,629...29,558,321
JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 ISO
ISS
(PMID:15665297)
GO_REF:0000024
RGD
UniProt
PMID:15665297 GO_REF:0000024 NCBI chr10:106,856,097...106,864,419
Ensembl chr10:106,856,097...106,864,413
JBrowse link
G Bod1 biorientation of chromosomes in cell division 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:16,259,728...16,266,069
Ensembl chr10:16,259,728...16,266,061
JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase ISO (PMID:19465021) RGD PMID:19465021 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ISO (PMID:19465021) RGD PMID:19465021 NCBI chr 3:110,367,949...110,420,471
Ensembl chr 3:110,367,939...110,420,458
JBrowse link
G Cenph centromere protein H IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:30,766,637...30,780,123
Ensembl chr 2:30,766,590...30,780,121
JBrowse link
G Cenpn centromere protein N IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:49,457,461...49,479,989
Ensembl chr19:49,340,184...49,479,996
JBrowse link
G Cenpu centromere protein U IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:48,898,032...48,921,248
Ensembl chr16:48,897,982...48,921,242
JBrowse link
G Cenpw centromere protein W IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:29,915,443...29,920,598
Ensembl chr 1:29,915,443...29,920,598
JBrowse link
G Cfdp1 craniofacial development protein 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:43,989,596...44,078,320
Ensembl chr19:43,971,474...44,078,336
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 ISO
IBA
(PMID:21063390)
PMID:21873635
RGD PMID:21063390, PMID:21873635 RGD:13792537 NCBI chr16:80,839,373...80,850,340
Ensembl chr16:80,839,374...80,850,340
JBrowse link
G Ckap5 cytoskeleton associated protein 5 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:80,424,320...80,526,583
Ensembl chr 3:80,468,154...80,526,593
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:34,365,038...34,584,651
Ensembl chr13:34,365,147...34,584,651
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:122,003,719...122,185,495
Ensembl chr 8:122,003,916...122,185,495
JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:56,887,722...56,910,610
Ensembl chr18:56,887,354...56,918,345
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex ISO (PMID:15371340) RGD PMID:15371340 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:30,807,755...31,121,097
Ensembl chr 4:30,807,879...31,121,090
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:122,743,274...122,776,801
Ensembl chr 8:122,743,189...122,776,806
JBrowse link
G Hjurp Holliday junction recognition protein ISO (PMID:19410545) RGD PMID:19410545 NCBI chr 9:95,347,739...95,362,228
Ensembl chr 9:95,349,086...95,362,014
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Incenp inner centromere protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:225,923,448...225,953,384
Ensembl chr 1:225,925,773...225,952,516
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:118,476,410...118,541,928
Ensembl chr 5:118,476,430...118,673,780
JBrowse link
G Kif2b kinesin family member 2B IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:79,095,588...79,097,807
Ensembl chr10:79,095,593...79,097,807
JBrowse link
G Kif2c kinesin family member 2C IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:136,027,923...136,053,268
Ensembl chr 5:136,027,934...136,053,210
JBrowse link
G Knl1 kinetochore scaffold 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:110,847,304...110,909,807
Ensembl chr 3:110,855,000...110,909,807
JBrowse link
G Knstrn kinetochore-localized astrin/SPAG5 binding protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:110,618,256...110,638,024
Ensembl chr 3:110,618,298...110,638,046
JBrowse link
G LOC100911204 protein CASC5-like ISO
IBA
(PMID:15371340)
PMID:21873635
RGD PMID:15371340, PMID:21873635 RGD:13792537 NCBI chr 3:112,531,429...112,560,698
Ensembl chr 3:112,531,703...112,560,634
JBrowse link
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:23,574,234...23,587,262
Ensembl chr12:23,574,187...23,587,276
JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:143,081,298...143,103,225
Ensembl chr 5:143,081,326...143,103,222
JBrowse link
G Meikin meiotic kinetochore factor ISO
IBA
(MGI:MGI:5609844|PMID:25533956)
PMID:21873635
RGD PMID:25533956, PMID:21873635 MGI:MGI:5609844, RGD:13792537 NCBI chr10:39,726,373...39,776,458
Ensembl chr10:39,726,507...39,751,398
JBrowse link
G Mis12 MIS12 kinetochore complex component ISO (PMID:15371340) RGD PMID:15371340 NCBI chr10:57,653,685...57,661,833
Ensembl chr10:57,660,067...57,660,687
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 ISO (MGI:MGI:5317363|PMID:21795393) RGD PMID:21795393 MGI:MGI:5317363 NCBI chr 8:28,075,629...28,145,024
Ensembl chr 8:28,075,551...28,144,741
JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO (PMID:14699129) RGD PMID:14699129 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Nde1 nudE neurodevelopment protein 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:860,513...904,624
Ensembl chr10:860,521...896,938
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:55,398,919...55,456,654
Ensembl chr10:55,411,901...55,444,861
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex ISO (PMID:15371340) RGD PMID:15371340 NCBI chr13:109,669,646...109,697,849
Ensembl chr13:109,669,680...109,696,918
JBrowse link
G Nudcd2 NudC domain containing 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:25,890,943...25,896,432
Ensembl chr10:25,890,943...25,896,432
JBrowse link
G Nup107 nucleoporin 107 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:60,781,724...60,825,225
Ensembl chr 7:60,781,729...60,825,242
JBrowse link
G Nup133 nucleoporin 133 colocalizes_with ISO
IBA
(PMID:17098863)
PMID:21873635
RGD PMID:17098863, PMID:21873635 RGD:13792537 NCBI chr19:56,681,965...56,731,404
Ensembl chr19:56,681,979...56,731,372
JBrowse link
G Nup85 nucleoporin 85 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:104,118,999...104,137,258
Ensembl chr10:104,118,945...104,137,319
JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:47,211,682...47,270,343
Ensembl chr15:47,211,583...47,270,317
JBrowse link
G Pmf1 polyamine-modulated factor 1 ISO (PMID:15371340) RGD PMID:15371340 NCBI chr 2:187,751,770...187,771,933
Ensembl chr 2:187,751,776...187,771,865
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:39,864,302...39,882,030
Ensembl chr12:39,864,295...39,882,030
JBrowse link
G Rassf2 Ras association domain family member 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:124,574,088...124,610,267
Ensembl chr 3:124,575,621...124,610,267
JBrowse link
G Septin7 septin 7 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:26,412,910...26,476,615
Ensembl chr 8:26,413,233...26,476,611
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:22,780,639...22,785,908
Ensembl chr 8:22,780,725...22,785,671
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex ISO
IBA
ISS
(PMID:14699129)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:14699129, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:55,438,534...55,451,961
Ensembl chr 3:55,438,536...55,451,798
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:175,426,754...175,445,222
Ensembl chr 3:175,426,752...175,445,222
JBrowse link
G Tex14 testis expressed 14, intercellular bridge forming factor IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:74,724,070...74,849,172
Ensembl chr10:74,724,549...74,849,194
JBrowse link
G Zw10 zw10 kinetochore protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:53,365,881...53,390,742
Ensembl chr 8:53,365,857...53,390,930
JBrowse link
G Zwilch zwilch kinetochore protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:69,089,449...69,121,420
Ensembl chr 8:69,091,955...69,121,192
JBrowse link
G Zwint ZW10 interacting kinetochore protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr20:17,075,781...17,091,715
Ensembl chr20:17,075,771...17,091,766
JBrowse link
condensed chromosome outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bod1 biorientation of chromosomes in cell division 1 ISO
IBA
(PMID:17938248)
PMID:21873635
RGD PMID:17938248, PMID:21873635 RGD:13792537 NCBI chr10:16,259,728...16,266,069
Ensembl chr10:16,259,728...16,266,061
JBrowse link
G Bod1l1 biorientation of chromosomes in cell division 1-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:73,738,137...73,792,935
Ensembl chr14:73,738,137...73,791,656
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ISO (PMID:19468067)
(MGI:MGI:2682084|PMID:14519686), (MGI:MGI:3839184|PMID:19283064)
RGD PMID:14519686, PMID:19283064, PMID:19468067 MGI:MGI:2682084, MGI:MGI:3839184 NCBI chr 3:110,367,949...110,420,471
Ensembl chr 3:110,367,939...110,420,458
JBrowse link
G Cenpe centromere protein E ISO (MGI:MGI:3839184|PMID:19283064) RGD PMID:19283064 MGI:MGI:3839184 NCBI chr 2:240,395,974...240,454,785
Ensembl chr 2:240,396,152...240,454,747
JBrowse link
G Cenpf centromere protein F ISO (PMID:7542657), (PMID:7642639), (PMID:7904902) RGD PMID:7542657, PMID:7642639, PMID:7904902 NCBI chr13:108,132,499...108,178,609
Ensembl chr13:108,132,499...108,178,609
JBrowse link
G Crebbp CREB binding protein ISO (MGI:MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:MGI:2682084 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Nup133 nucleoporin 133 colocalizes_with ISO (PMID:17363900) RGD PMID:17363900 NCBI chr19:56,681,965...56,731,404
Ensembl chr19:56,681,979...56,731,372
JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:17093495), (PMID:19289083)
UniProt
RGD
PMID:17093495, PMID:19289083, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr18:70,174,316...70,184,368
Ensembl chr18:70,173,944...70,184,337
JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:17093495), (PMID:19289083)
UniProt
RGD
PMID:17093495, PMID:19289083, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:74,413,989...74,431,922
Ensembl chr10:74,413,989...74,431,922
JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 ISO
IBA
ISS
(PMID:19289083)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19289083, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:38,077,903...38,097,100
Ensembl chr15:38,077,909...38,096,875
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 ISO
IBA
ISS
(PMID:19468067)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19468067, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:19,628,070...19,652,914
Ensembl chr10:19,628,258...19,652,898
JBrowse link
condensed chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurkb aurora kinase B ISO (PMID:19465021) RGD PMID:19465021 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Cbx3 chromobox 3 ISO (MGI:MGI:3777546|PMID:11124534) RGD PMID:11124534 MGI:MGI:3777546 NCBI chr 4:81,243,809...81,257,898
Ensembl chr 4:81,244,469...81,257,897
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta ISO (MGI:MGI:4947203|PMID:21122806) RGD PMID:21122806 MGI:MGI:4947203 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cenpe centromere protein E ISO (PMID:19465021) RGD PMID:19465021 NCBI chr 2:240,395,974...240,454,785
Ensembl chr 2:240,396,152...240,454,747
JBrowse link
G Ncapd2 non-SMC condensin I complex, subunit D2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:157,682,855...157,705,903
Ensembl chr 4:157,683,077...157,704,596
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:28,075,629...28,145,024
Ensembl chr 8:28,075,551...28,144,741
JBrowse link
G Ncapg non-SMC condensin I complex, subunit G ISO (MGI:MGI:5317363|PMID:21795393) RGD PMID:21795393 MGI:MGI:5317363 NCBI chr14:69,898,268...69,927,885
Ensembl chr14:69,899,128...69,927,938
JBrowse link
G Sgo1 shugoshin 1 ISO (PMID:19465021) RGD PMID:19465021 NCBI chr 9:4,420,158...4,435,939
Ensembl chr 9:4,421,069...4,436,601
JBrowse link
G Sgo2 shugoshin 2 ISO (MGI:MGI:3806388|PMID:18765791), (MGI:MGI:3839184|PMID:19283064), (MGI:MGI:5609844|PMID:25533956) RGD PMID:18765791, PMID:19283064, PMID:25533956 MGI:MGI:3806388, MGI:MGI:3839184, MGI:MGI:5609844 NCBI chr 9:64,898,380...64,923,023
Ensembl chr 9:64,898,459...64,923,012
JBrowse link
condensed nuclear chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07048387.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:76,240,167...76,261,198 JBrowse link
G Add3 adducin 3 ISO
IEA
(MGI:MGI:80989|PMID:1864459)
GO_REF:0000107
RGD
Ensembl
PMID:1864459 GO_REF:0000107, MGI:MGI:80989 NCBI chr 1:273,854,195...273,961,982
Ensembl chr 1:273,854,248...273,961,982
JBrowse link
G Ago3 argonaute RISC catalytic component 3 ISO (MGI:MGI:5437526|PMID:22863743) RGD PMID:22863743 MGI:MGI:5437526 NCBI chr 5:144,355,792...144,436,509
Ensembl chr 5:144,364,269...144,436,509
JBrowse link
G Brca1 BRCA1, DNA repair associated ISO (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5700253|PMID:26490168) RGD PMID:20551173, PMID:26490168 MGI:MGI:4457793, MGI:MGI:5700253 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Brd4 bromodomain containing 4 ISO (PMID:10938129)
(MGI:MGI:1888422|PMID:10938129), (MGI:MGI:3654777|PMID:16339075), (MGI:MGI:3771631|PMID:18039861)
RGD PMID:10938129, PMID:16339075, PMID:18039861 MGI:MGI:1888422, MGI:MGI:3654777, MGI:MGI:3771631 NCBI chr 7:14,222,101...14,303,055
Ensembl chr 7:14,222,101...14,303,055
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 ISO (MGI:MGI:5606256|PMID:24891606) RGD PMID:24891606 MGI:MGI:5606256 NCBI chr15:27,720,220...27,736,528
Ensembl chr15:27,720,223...27,733,785
JBrowse link
G Cdx2 caudal type homeo box 2 ISO (MGI:MGI:3056244|PMID:15509711) RGD PMID:15509711 MGI:MGI:3056244 NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565
JBrowse link
G Chek1 checkpoint kinase 1 ISO
ISS
(PMID:9382850)
GO_REF:0000024
RGD
UniProt
PMID:9382850 GO_REF:0000024 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Chmp1a charged multivesicular body protein 1A ISO (PMID:11559747) RGD PMID:11559747 NCBI chr19:56,001,724...56,010,004
Ensembl chr19:56,001,724...56,010,004
JBrowse link
G Dmc1 DNA meiotic recombinase 1 ISO
IBA
(MGI:MGI:3774244|PMID:18316482), (MGI:MGI:3794139|PMID:18283110), (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5428050|PMID:22711701), (MGI:MGI:5586966|PMID:22530760), (MGI:MGI:5805564|PMID:27760146)
PMID:21873635
RGD PMID:18283110, PMID:18316482, PMID:20551173, PMID:22164254, PMID:22530760, PMID:22711701, PMID:27760146, PMID:21873635 MGI:MGI:3774244, MGI:MGI:3794139, MGI:MGI:4457793, MGI:MGI:5315075, MGI:MGI:5428050, MGI:MGI:5586966, MGI:MGI:5805564, RGD:13792537 NCBI chr 7:120,796,217...120,840,524
Ensembl chr 7:120,796,217...120,839,577
JBrowse link
G Dnmt3l DNA methyltransferase 3 like ISO
IEA
(MGI:MGI:3623538|PMID:16543361)
GO_REF:0000107
RGD
Ensembl
PMID:16543361 GO_REF:0000107, MGI:MGI:3623538 NCBI chr20:11,344,513...11,359,090
Ensembl chr20:11,344,514...11,359,090
JBrowse link
G H1f6 H1.6 linker histone, cluster member ISO (MGI:MGI:3774244|PMID:18316482) RGD PMID:18316482 MGI:MGI:3774244 NCBI chr17:43,675,190...43,675,934
Ensembl chr17:43,675,190...43,675,934
JBrowse link
G H2ax H2A.X variant histone ISO (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5428050|PMID:22711701), (MGI:MGI:5477835|PMID:23555294), (MGI:MGI:5700253|PMID:26490168) RGD PMID:20551173, PMID:22164254, PMID:22711701, PMID:23555294, PMID:26490168 MGI:MGI:4457793, MGI:MGI:5315075, MGI:MGI:5428050, MGI:MGI:5477835, MGI:MGI:5700253 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G Hormad1 HORMA domain containing 1 ISO (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5586966|PMID:22530760) RGD PMID:22164254, PMID:22530760 MGI:MGI:5315075, MGI:MGI:5586966 NCBI chr 2:197,681,820...197,720,197
Ensembl chr 2:197,682,000...197,719,254
JBrowse link
G Iho1 interactor of HORMAD1 1 ISO
IBA
(MGI:MGI:5822944|PMID:27723721)
PMID:21873635
RGD PMID:27723721, PMID:21873635 MGI:MGI:5822944, RGD:13792537 NCBI chr 8:117,182,484...117,215,390
Ensembl chr 8:117,183,343...117,211,170
JBrowse link
G Kifap3 kinesin-associated protein 3 ISO (PMID:16298999) RGD PMID:16298999 NCBI chr13:82,072,497...82,217,256
Ensembl chr13:82,072,497...82,217,252
JBrowse link
G Lig3 DNA ligase 3 ISO (MGI:MGI:85057|PMID:9001252) RGD PMID:9001252 MGI:MGI:85057 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Lrpprc leucine-rich pentatricopeptide repeat containing ISO
ISS
(PMID:12762840)
GO_REF:0000024
RGD
HGNC
PMID:12762840 GO_REF:0000024 NCBI chr 6:7,984,043...8,066,874
Ensembl chr 6:7,984,019...8,066,868
JBrowse link
G Mlh1 mutL homolog 1 ISO (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:5477835|PMID:23555294), (MGI:MGI:5606256|PMID:24891606) RGD PMID:18316482, PMID:23555294, PMID:24891606 MGI:MGI:3774244, MGI:MGI:5477835, MGI:MGI:5606256 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mlh3 mutL homolog 3 ISO (MGI:MGI:5606256|PMID:24891606) RGD PMID:24891606 MGI:MGI:5606256 NCBI chr 6:109,059,386...109,095,876
Ensembl chr 6:109,059,341...109,095,557
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease IDA sex vesicles/chromatin of XY bivalent RGD PMID:10855503 RGD:2300257 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Msh4 mutS homolog 4 ISO (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5477835|PMID:23555294) RGD PMID:18316482, PMID:22164254, PMID:23555294 MGI:MGI:3774244, MGI:MGI:5315075, MGI:MGI:5477835 NCBI chr 2:260,057,708...260,108,897
Ensembl chr 2:260,057,855...260,108,897
JBrowse link
G Nek2 NIMA-related kinase 2 ISO (MGI:MGI:3057231|PMID:15479717) RGD PMID:15479717 MGI:MGI:3057231 NCBI chr13:110,511,546...110,524,750
Ensembl chr13:110,511,668...110,522,769
JBrowse link
G Nifk nucleolar protein interacting with the FHA domain of MKI67 ISO (PMID:11342549) RGD PMID:11342549 NCBI chr13:34,267,442...34,277,543
Ensembl chr13:34,267,471...34,277,530
JBrowse link
G Nol6 nucleolar protein 6 ISO (MGI:MGI:2179879|PMID:11895476) RGD PMID:11895476 MGI:MGI:2179879 NCBI chr 5:57,444,448...57,473,803
Ensembl chr 5:57,445,344...57,455,018
JBrowse link
G Rad21 RAD21 cohesin complex component ISO (MGI:MGI:5575825|PMID:24797475) RGD PMID:24797475 MGI:MGI:5575825 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 ISO (MGI:MGI:5575825|PMID:24797475) RGD PMID:24797475 MGI:MGI:5575825 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rad50 RAD50 double strand break repair protein IDA
IBA
sex vesicles/chromatin of XY bivalent
PMID:21873635
RGD
GO_Central
PMID:10855503, PMID:21873635 RGD:2300257, RGD:13792537 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Rad51 RAD51 recombinase ISO
IBA
(MGI:MGI:3027988|PMID:14668445), (MGI:MGI:3794139|PMID:18283110), (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5477835|PMID:23555294), (MGI:MGI:5586966|PMID:22530760), (MGI:MGI:5606256|PMID:24891606), (MGI:MGI:5700253|PMID:26490168), (MGI:MGI:5805564|PMID:27760146)
PMID:21873635
RGD PMID:14668445, PMID:18283110, PMID:20551173, PMID:22164254, PMID:22530760, PMID:23555294, PMID:24891606, PMID:26490168, PMID:27760146, PMID:21873635 MGI:MGI:3027988, MGI:MGI:3794139, MGI:MGI:4457793, MGI:MGI:5315075, MGI:MGI:5477835, MGI:MGI:5586966, MGI:MGI:5606256, MGI:MGI:5700253, MGI:MGI:5805564, RGD:13792537 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rcc1 regulator of chromosome condensation 1 ISO (PMID:15014043) RGD PMID:15014043 NCBI chr 5:150,508,840...150,531,062
Ensembl chr 5:150,509,040...150,525,254
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:MGI:3771209|PMID:18084284), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5575825|PMID:24797475) RGD PMID:18084284, PMID:22164254, PMID:24797475 MGI:MGI:3771209, MGI:MGI:5315075, MGI:MGI:5575825 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Rpa1 replication protein A1 ISO (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:3794139|PMID:18283110), (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5315075|PMID:22164254) RGD PMID:18283110, PMID:18316482, PMID:20551173, PMID:22164254 MGI:MGI:3774244, MGI:MGI:3794139, MGI:MGI:4457793, MGI:MGI:5315075 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Rrs1 ribosome biogenesis regulator 1 homolog ISO (PMID:19465021) RGD PMID:19465021 NCBI chr 5:9,430,710...9,432,343
Ensembl chr 5:9,430,728...9,432,343
JBrowse link
G Rsph1 radial spoke head component 1 ISO (MGI:MGI:1203866|PMID:9578619) RGD PMID:9578619 MGI:MGI:1203866 NCBI chr20:9,998,698...10,020,719
Ensembl chr20:9,998,701...10,013,559
JBrowse link
G Shoc1 shortage in chiasmata 1 ISO (MGI:MGI:6159552|PMID:29742103) RGD PMID:29742103 MGI:MGI:6159552 NCBI chr 5:76,190,486...76,298,723 JBrowse link
G Smc1b structural maintenance of chromosomes 1B ISO (MGI:MGI:5315075|PMID:22164254) RGD PMID:22164254 MGI:MGI:5315075 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Stag3 stromal antigen 3 ISO (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5575825|PMID:24797475) RGD PMID:22164254, PMID:24797475 MGI:MGI:5315075, MGI:MGI:5575825 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 ISO (MGI:MGI:3708891|PMID:17452644) RGD PMID:17452644 MGI:MGI:3708891 NCBI chr 7:120,950,391...120,967,583
Ensembl chr 7:120,951,560...120,967,490
JBrowse link
G Sycp1 synaptonemal complex protein 1 ISO (MGI:MGI:5437526|PMID:22863743), (MGI:MGI:5504589|PMID:22854038), (MGI:MGI:5567006|PMID:24589552), (MGI:MGI:5606256|PMID:24891606) RGD PMID:22854038, PMID:22863743, PMID:24589552, PMID:24891606 MGI:MGI:5437526, MGI:MGI:5504589, MGI:MGI:5567006, MGI:MGI:5606256 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:5285037|PMID:21621532), (MGI:MGI:5437526|PMID:22863743), (MGI:MGI:5567006|PMID:24589552), (MGI:MGI:5606256|PMID:24891606) RGD PMID:18316482, PMID:21621532, PMID:22863743, PMID:24589552, PMID:24891606 MGI:MGI:3774244, MGI:MGI:5285037, MGI:MGI:5437526, MGI:MGI:5567006, MGI:MGI:5606256 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
G Tex11 testis expressed 11 ISO (MGI:MGI:3774244|PMID:18316482) RGD PMID:18316482 MGI:MGI:3774244 NCBI chr  X:70,670,212...70,946,621
Ensembl chr  X:70,670,322...70,946,565
JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 ISO (MGI:MGI:3042347|PMID:14718568) RGD PMID:14718568 MGI:MGI:3042347 NCBI chr 8:111,790,655...111,835,224
Ensembl chr 8:111,790,678...111,827,151
JBrowse link
G Ttn titin ISO (PMID:9548712) RGD PMID:9548712 NCBI chr 3:63,565,160...63,837,815 JBrowse link
G Tubg1 tubulin, gamma 1 ISO (MGI:MGI:3688382|PMID:15007207) RGD PMID:15007207 MGI:MGI:3688382 NCBI chr10:89,030,865...89,037,455
Ensembl chr10:89,030,865...89,037,455
JBrowse link
condensed nuclear chromosome inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpk centromere protein K IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:34,312,766...34,373,945
Ensembl chr 2:34,312,766...34,335,776
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
condensed nuclear chromosome kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ISO
IBA
(MGI:MGI:3806388|PMID:18765791)
PMID:21873635
RGD PMID:18765791, PMID:21873635 MGI:MGI:3806388, RGD:13792537 NCBI chr 3:110,367,949...110,420,471
Ensembl chr 3:110,367,939...110,420,458
JBrowse link
G Cenpa centromere protein A ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 6:27,072,259...27,080,863
Ensembl chr 6:27,072,166...27,080,856
JBrowse link
G Cenpc centromere protein C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:23,611,909...23,670,314
Ensembl chr14:23,611,735...23,670,475
JBrowse link
G Cenpe centromere protein E ISO (MGI:MGI:3806388|PMID:18765791) RGD PMID:18765791 MGI:MGI:3806388 NCBI chr 2:240,395,974...240,454,785
Ensembl chr 2:240,396,152...240,454,747
JBrowse link
G Cenpo centromere protein O IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:28,648,804...28,663,527
Ensembl chr 6:28,649,638...28,663,233
JBrowse link
G Cenpt centromere protein T IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,813,284...37,819,782
Ensembl chr19:37,812,751...37,819,789
JBrowse link
G Mis18bp1 MIS18 binding protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:86,879,106...86,925,209
Ensembl chr 6:86,879,719...86,924,146
JBrowse link
G Ndc80 NDC80 kinetochore complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:87,818,456...87,847,223
Ensembl chr13:87,818,391...87,847,263
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 ISO (MGI:MGI:6378311|PMID:28410192) RGD PMID:28410192 MGI:MGI:6378311 NCBI chr14:106,008,086...106,062,566
Ensembl chr14:106,008,086...106,061,641
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:MGI:3806388|PMID:18765791) RGD PMID:18765791 MGI:MGI:3806388 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
condensed nuclear chromosome outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase ISO (PMID:24055156) RGD PMID:24055156 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Ccnb1 cyclin B1 ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Plk1 polo-like kinase 1 ISO
IEA
(PMID:18195732)
GO_REF:0000107
RGD
Ensembl
PMID:18195732 GO_REF:0000107 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
condensed nuclear chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027258.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:21,430,337...21,484,456 JBrowse link
G Atrx ATRX, chromatin remodeler ISO
IEA
(MGI:MGI:3052396|PMID:15242786)
GO_REF:0000107
RGD
Ensembl
PMID:15242786 GO_REF:0000107, MGI:MGI:3052396 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Aurka aurora kinase A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210
JBrowse link
G Aurkb aurora kinase B ISO
IBA
(PMID:18195732)
PMID:21873635
(MGI:MGI:3044098|PMID:14751927)
RGD PMID:14751927, PMID:18195732, PMID:21873635 MGI:MGI:3044098, RGD:13792537 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Aurkc aurora kinase C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,958,452...69,964,546
Ensembl chr 1:69,958,452...69,963,592
JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase ISO (MGI:MGI:3771209|PMID:18084284), (MGI:MGI:4415638|PMID:19965387) RGD PMID:18084284, PMID:19965387 MGI:MGI:3771209, MGI:MGI:4415638 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Cenpa centromere protein A ISO (PMID:11682612)
(MGI:MGI:3052396|PMID:15242786)
RGD PMID:11682612, PMID:15242786 MGI:MGI:3052396 NCBI chr 6:27,072,259...27,080,863
Ensembl chr 6:27,072,166...27,080,856
JBrowse link
G Cenpb centromere protein B ISO (MGI:MGI:3052396|PMID:15242786) RGD PMID:15242786 MGI:MGI:3052396 NCBI chr 3:123,720,888...123,723,520
Ensembl chr 3:123,721,486...123,723,524
JBrowse link
G Cenpc centromere protein C ISO (PMID:11682612)
(MGI:MGI:3052396|PMID:15242786)
RGD PMID:11682612, PMID:15242786 MGI:MGI:3052396 NCBI chr14:23,611,909...23,670,314
Ensembl chr14:23,611,735...23,670,475
JBrowse link
G Kmt5b lysine methyltransferase 5B ISO (MGI:MGI:3043964|PMID:15145825) RGD PMID:15145825 MGI:MGI:3043964 NCBI chr 1:219,000,844...219,050,211
Ensembl chr 1:219,000,844...219,050,211
JBrowse link
G Kmt5c lysine methyltransferase 5C ISO (MGI:MGI:3043964|PMID:15145825) RGD PMID:15145825 MGI:MGI:3043964 NCBI chr 1:72,666,662...72,674,271
Ensembl chr 1:72,666,665...72,674,271
JBrowse link
G Meikin meiotic kinetochore factor ISO
IBA
(MGI:MGI:5609844|PMID:25533956)
PMID:21873635
RGD PMID:25533956, PMID:21873635 MGI:MGI:5609844, RGD:13792537 NCBI chr10:39,726,373...39,776,458
Ensembl chr10:39,726,507...39,751,398
JBrowse link
G Plk1 polo-like kinase 1 ISO (MGI:MGI:5504589|PMID:22854038) RGD PMID:22854038 MGI:MGI:5504589 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
G Rad21 RAD21 cohesin complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO
IBA
(MGI:MGI:3771209|PMID:18084284), (MGI:MGI:5288570|PMID:21743440)
PMID:21873635
RGD PMID:18084284, PMID:21743440, PMID:21873635 MGI:MGI:3771209, MGI:MGI:5288570, RGD:13792537 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Sgo1 shugoshin 1 ISO
IBA
(MGI:MGI:3771209|PMID:18084284)
PMID:21873635
RGD PMID:18084284, PMID:21873635 MGI:MGI:3771209, RGD:13792537 NCBI chr 9:4,420,158...4,435,939
Ensembl chr 9:4,421,069...4,436,601
JBrowse link
G Sgo2 shugoshin 2 ISO
IBA
(MGI:MGI:3771209|PMID:18084284)
PMID:21873635
RGD PMID:18084284, PMID:21873635 MGI:MGI:3771209, RGD:13792537 NCBI chr 9:64,898,380...64,923,023
Ensembl chr 9:64,898,459...64,923,012
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex ISO (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:3794139|PMID:18283110), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5606256|PMID:24891606) RGD PMID:18283110, PMID:18316482, PMID:22164254, PMID:24891606 MGI:MGI:3774244, MGI:MGI:3794139, MGI:MGI:5315075, MGI:MGI:5606256 NCBI chr 3:175,426,754...175,445,222
Ensembl chr 3:175,426,752...175,445,222
JBrowse link
G Sycp2 synaptonemal complex protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:173,884,559...173,948,304
Ensembl chr 3:173,884,287...173,947,018
JBrowse link
G Sycp2l synaptonemal complex protein 2-like ISO (MGI:MGI:5692009|PMID:26362258)
(PMID:26362258)
RGD PMID:26362258 MGI:MGI:5692009 NCBI chr17:21,430,470...21,486,091 JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO (MGI:MGI:5504589|PMID:22854038) RGD PMID:22854038 MGI:MGI:5504589 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
condensin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncapd2 non-SMC condensin I complex, subunit D2 ISO (MGI:MGI:5317363|PMID:21795393)
(PMID:11136719), (PMID:12138188)
RGD PMID:11136719, PMID:12138188, PMID:21795393 MGI:MGI:5317363 NCBI chr 4:157,682,855...157,705,903
Ensembl chr 4:157,683,077...157,704,596
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 ISO (MGI:MGI:5317363|PMID:21795393) RGD PMID:21795393 MGI:MGI:5317363 NCBI chr 8:28,075,629...28,145,024
Ensembl chr 8:28,075,551...28,144,741
JBrowse link
G Ncapg non-SMC condensin I complex, subunit G ISO (MGI:MGI:5317363|PMID:21795393)
(PMID:11136719)
RGD PMID:11136719, PMID:21795393 MGI:MGI:5317363 NCBI chr14:69,898,268...69,927,885
Ensembl chr14:69,899,128...69,927,938
JBrowse link
G Ncapg2 non-SMC condensin II complex, subunit G2 ISO
IBA
(MGI:MGI:5317363|PMID:21795393)
PMID:21873635
RGD PMID:21795393, PMID:21873635 MGI:MGI:5317363, RGD:13792537 NCBI chr 6:144,291,313...144,362,454
Ensembl chr 6:144,291,974...144,363,947
JBrowse link
G Ncaph non-SMC condensin I complex, subunit H ISO (PMID:11136719)
UniProtKB:Q8BSP2 (MGI:MGI:5317363|PMID:21795393), (MGI:MGI:5644098|PMID:25474630)
RGD PMID:11136719, PMID:21795393, PMID:25474630 MGI:MGI:5317363, MGI:MGI:5644098 NCBI chr 3:119,583,798...119,611,148
Ensembl chr 3:119,583,648...119,611,136
JBrowse link
G Ncaph2 non-SMC condensin II complex, subunit H2 IEA
ISO
IBA
GO_REF:0000107
UniProtKB:Q8CG48 (MGI:MGI:5317363|PMID:21795393), (MGI:MGI:5644098|PMID:25474630)
PMID:21873635
Ensembl
RGD
PMID:21795393, PMID:25474630, PMID:21873635 GO_REF:0000107, MGI:MGI:5317363, MGI:MGI:5644098, RGD:13792537 NCBI chr 7:130,326,597...130,343,655
Ensembl chr 7:130,326,600...130,342,493
JBrowse link
G Smc2 structural maintenance of chromosomes 2 ISO (PMID:10958694), (PMID:11136719)
UniProtKB:Q8BSP2|UniProtKB:Q8C156 (MGI:MGI:5317363|PMID:21795393), (MGI:MGI:5644098|PMID:25474630)
RGD PMID:10958694, PMID:11136719, PMID:21795393, PMID:25474630 MGI:MGI:5317363, MGI:MGI:5644098 NCBI chr 5:68,717,509...68,764,080
Ensembl chr 5:68,717,519...68,763,850
JBrowse link
G Smc4 structural maintenance of chromosomes 4 ISO (MGI:MGI:5317363|PMID:21795393)
(PMID:11136719)
RGD PMID:11136719, PMID:21795393 MGI:MGI:5317363 NCBI chr 2:165,600,934...165,629,415
Ensembl chr 2:165,601,007...165,629,415
JBrowse link
condensin core heterodimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smc2 structural maintenance of chromosomes 2 ISO (PMID:9789013) RGD PMID:9789013 NCBI chr 5:68,717,509...68,764,080
Ensembl chr 5:68,717,519...68,763,850
JBrowse link
G Smc4 structural maintenance of chromosomes 4 ISO (PMID:9789013) RGD PMID:9789013 NCBI chr 2:165,600,934...165,629,415
Ensembl chr 2:165,601,007...165,629,415
JBrowse link
late recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 ISO
IEA
(MGI:MGI:5805564|PMID:27760146)
GO_REF:0000107
RGD
Ensembl
PMID:27760146 GO_REF:0000107, MGI:MGI:5805564 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
lateral element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027258.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:21,430,337...21,484,456 JBrowse link
G Blm BLM RecQ like helicase ISO (PMID:10728666) RGD PMID:10728666 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Brca1 BRCA1, DNA repair associated IEA
ISO
GO_REF:0000107
(PMID:9774970)
Ensembl
RGD
PMID:9774970 GO_REF:0000107 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Brca2 BRCA2, DNA repair associated IEA
ISO
GO_REF:0000107
(PMID:9774970)
Ensembl
RGD
PMID:9774970 GO_REF:0000107 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Incenp inner centromere protein ISO (MGI:MGI:3839184|PMID:19283064) RGD PMID:19283064 MGI:MGI:3839184 NCBI chr 1:225,923,448...225,953,384
Ensembl chr 1:225,925,773...225,952,516
JBrowse link
G Kash5 KASH domain containing 5 ISO
IBA
(MGI:MGI:5515826|PMID:24062341)
PMID:21873635
RGD PMID:24062341, PMID:21873635 MGI:MGI:5515826, RGD:13792537 NCBI chr 1:101,180,497...101,203,048
Ensembl chr 1:101,180,657...101,198,801
JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 ISO
IBA
(MGI:MGI:4457793|PMID:20551173)
PMID:21873635
RGD PMID:20551173, PMID:21873635 MGI:MGI:4457793, RGD:13792537 NCBI chr 8:89,369,417...89,556,942
Ensembl chr 8:89,369,417...89,556,942
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 ISO (MGI:MGI:5288570|PMID:21743440) RGD PMID:21743440 MGI:MGI:5288570 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rad51 RAD51 recombinase ISO (PMID:9774970)
(MGI:MGI:3813746|PMID:18694567), (MGI:MGI:5288570|PMID:21743440)
RGD PMID:9774970, PMID:18694567, PMID:21743440 MGI:MGI:3813746, MGI:MGI:5288570 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:MGI:3578071 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Rpa1 replication protein A1 ISO (MGI:MGI:5288570|PMID:21743440), (MGI:MGI:5428050|PMID:22711701) RGD PMID:21743440, PMID:22711701 MGI:MGI:5288570, MGI:MGI:5428050 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Smc1b structural maintenance of chromosomes 1B ISO (MGI:MGI:3578071|PMID:15870106), (MGI:MGI:5428050|PMID:22711701) RGD PMID:15870106, PMID:22711701 MGI:MGI:3578071, MGI:MGI:5428050 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Smc3 structural maintenance of chromosomes 3 IEA
ISO
GO_REF:0000107
(MGI:MGI:3578071|PMID:15870106), (MGI:MGI:5428050|PMID:22711701)
Ensembl
RGD
PMID:15870106, PMID:22711701 GO_REF:0000107, MGI:MGI:3578071, MGI:MGI:5428050 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Stag3 stromal antigen 3 ISO (MGI:MGI:5428050|PMID:22711701) RGD PMID:22711701 MGI:MGI:5428050 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
G Sycp2 synaptonemal complex protein 2 IDA
IBA
ISO
PMID:9933407
PMID:21873635
(MGI:MGI:3794139|PMID:18283110), (MGI:MGI:5314623|PMID:22011390), (MGI:MGI:5428050|PMID:22711701), (MGI:MGI:5470363|PMID:23133398)
RGD PMID:18283110, PMID:22011390, PMID:22711701, PMID:23133398, PMID:9933407, PMID:21873635 MGI:MGI:3794139, MGI:MGI:5314623, MGI:MGI:5428050, MGI:MGI:5470363, RGD:11035335, RGD:13792537 NCBI chr 3:173,884,559...173,948,304
Ensembl chr 3:173,884,287...173,947,018
JBrowse link
G Sycp2l synaptonemal complex protein 2-like ISO (MGI:MGI:5692009|PMID:26362258) RGD PMID:26362258 MGI:MGI:5692009 NCBI chr17:21,430,470...21,486,091 JBrowse link
G Sycp3 synaptonemal complex protein 3 IDA
ISO
PMID:9933407
(MGI:MGI:1352918|PMID:10678170), (MGI:MGI:3839184|PMID:19283064), (MGI:MGI:4452449|PMID:18802469), (MGI:MGI:5049827|PMID:21539824), (MGI:MGI:5288570|PMID:21743440), (MGI:MGI:5314623|PMID:22011390), (MGI:MGI:5428050|PMID:22711701), (MGI:MGI:5470363|PMID:23133398), (MGI:MGI:5477835|PMID:23555294), (MGI:MGI:5504589|PMID:22854038), (MGI:MGI:5609844|PMID:25533956), (MGI:MGI:5661094|PMID:25675407)
RGD PMID:10678170, PMID:18802469, PMID:19283064, PMID:21539824, PMID:21743440, PMID:22011390, PMID:22711701, PMID:22854038, PMID:23133398, PMID:23555294, PMID:25533956, PMID:25675407, PMID:9933407 MGI:MGI:1352918, MGI:MGI:3839184, MGI:MGI:4452449, MGI:MGI:5049827, MGI:MGI:5288570, MGI:MGI:5314623, MGI:MGI:5428050, MGI:MGI:5470363, MGI:MGI:5477835, MGI:MGI:5504589, MGI:MGI:5609844, MGI:MGI:5661094, RGD:11035335 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
meiotic cohesin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad21l1 RAD21 cohesin complex component like 1 ISO (MGI:MGI:4942240|PMID:21242291), (MGI:MGI:5050018|PMID:21527826) RGD PMID:21242291, PMID:21527826 MGI:MGI:4942240, MGI:MGI:5050018 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:MGI:3719060|PMID:17696610) RGD PMID:17696610 MGI:MGI:3719060 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Smc1a structural maintenance of chromosomes 1A IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5050018|PMID:21527826)
(PMID:21242291)
Ensembl
UniProt
RGD
PMID:21242291, PMID:21527826 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5050018 NCBI chr  X:21,710,976...21,755,708
Ensembl chr  X:21,711,019...21,755,525
JBrowse link
G Smc1b structural maintenance of chromosomes 1B ISO (PMID:21242291)
(MGI:MGI:5050018|PMID:21527826)
RGD PMID:21242291, PMID:21527826 MGI:MGI:5050018 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Smc3 structural maintenance of chromosomes 3 ISO
ISS
(PMID:21242291)
GO_REF:0000024
(MGI:MGI:5050018|PMID:21527826)
RGD
UniProt
PMID:21242291, PMID:21527826 GO_REF:0000024, MGI:MGI:5050018 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Stag3 stromal antigen 3 ISO (PMID:21242291)
(MGI:MGI:3719060|PMID:17696610), (MGI:MGI:5050018|PMID:21527826)
RGD PMID:17696610, PMID:21242291, PMID:21527826 MGI:MGI:3719060, MGI:MGI:5050018 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
MIS12/MIND type complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsn1 DSN1 component of MIS12 kinetochore complex ISO (PMID:16585270) RGD PMID:16585270 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
G Mis12 MIS12 kinetochore complex component ISO
IEA
(PMID:16585270)
GO_REF:0000107
RGD
Ensembl
PMID:16585270 GO_REF:0000107 NCBI chr10:57,653,685...57,661,833
Ensembl chr10:57,660,067...57,660,687
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex ISO
IBA
(PMID:16585270)
PMID:21873635
RGD PMID:16585270, PMID:21873635 RGD:13792537 NCBI chr13:109,669,646...109,697,849
Ensembl chr13:109,669,680...109,696,918
JBrowse link
G Pmf1 polyamine-modulated factor 1 ISO (PMID:16585270) RGD PMID:16585270 NCBI chr 2:187,751,770...187,771,933
Ensembl chr 2:187,751,776...187,771,865
JBrowse link
Mis6-Sim4 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpo centromere protein O IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:28,648,804...28,663,527
Ensembl chr 6:28,649,638...28,663,233
JBrowse link
mitotic cohesin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx11 DEAD/H-box helicase 11 NOT|colocalizes_with ISO (PMID:17105772) RGD PMID:17105772 NCBI chr 9:114,113,642...114,133,908
Ensembl chr 9:114,111,580...114,132,492
JBrowse link
G Sgo2 shugoshin 2 ISO (PMID:18084284) RGD PMID:18084284 NCBI chr 9:64,898,380...64,923,023
Ensembl chr 9:64,898,459...64,923,012
JBrowse link
nuclear condensin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncapd2 non-SMC condensin I complex, subunit D2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:157,682,855...157,705,903
Ensembl chr 4:157,683,077...157,704,596
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 ISO
IBA
(PMID:14532007)
PMID:21873635
RGD PMID:14532007, PMID:21873635 RGD:13792537 NCBI chr 8:28,075,629...28,145,024
Ensembl chr 8:28,075,551...28,144,741
JBrowse link
G Ncaph non-SMC condensin I complex, subunit H IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:119,583,798...119,611,148
Ensembl chr 3:119,583,648...119,611,136
JBrowse link
G Smc4 structural maintenance of chromosomes 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:165,600,934...165,629,415
Ensembl chr 2:165,601,007...165,629,415
JBrowse link
nuclear meiotic cohesin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad21 RAD21 cohesin complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 ISO
IBA
(MGI:MGI:5315075|PMID:22164254)
PMID:21873635
RGD PMID:22164254, PMID:21873635 MGI:MGI:5315075, RGD:13792537 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO
IBA
(MGI:MGI:5288570|PMID:21743440), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5504589|PMID:22854038)
PMID:21873635
RGD PMID:21743440, PMID:22164254, PMID:22854038, PMID:21873635 MGI:MGI:5288570, MGI:MGI:5315075, MGI:MGI:5504589, RGD:13792537 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Smc1b structural maintenance of chromosomes 1B ISO (MGI:MGI:5288570|PMID:21743440), (MGI:MGI:5315075|PMID:22164254) RGD PMID:21743440, PMID:22164254 MGI:MGI:5288570, MGI:MGI:5315075 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Smc3 structural maintenance of chromosomes 3 IEA
ISO
GO_REF:0000107
(MGI:MGI:5288570|PMID:21743440), (MGI:MGI:5315075|PMID:22164254)
Ensembl
RGD
PMID:21743440, PMID:22164254 GO_REF:0000107, MGI:MGI:5288570, MGI:MGI:5315075 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Stag3 stromal antigen 3 ISO (MGI:MGI:5315075|PMID:22164254) RGD PMID:22164254 MGI:MGI:5315075 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
nuclear MIS12/MIND complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsn1 DSN1 component of MIS12 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
G Mis12 MIS12 kinetochore complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,653,685...57,661,833
Ensembl chr10:57,660,067...57,660,687
JBrowse link
G Pmf1 polyamine-modulated factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:187,751,770...187,771,933
Ensembl chr 2:187,751,776...187,771,865
JBrowse link
nuclear mitotic cohesin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad21 RAD21 cohesin complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rec8 REC8 meiotic recombination protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh4 mutS homolog 4 ISO (MGI:MGI:5805564|PMID:27760146) RGD PMID:27760146 MGI:MGI:5805564 NCBI chr 2:260,057,708...260,108,897
Ensembl chr 2:260,057,855...260,108,897
JBrowse link
Smc5-Smc6 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eid3 EP300 interacting inhibitor of differentiation 3 ISO
IBA
ISS
(PMID:18086888)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:18086888, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:26,976,154...26,977,479 JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:MGI:5882483|PMID:26919979)
PMID:21873635
GO_REF:0000024
(PMID:18086888)
Ensembl
RGD
UniProt
PMID:18086888, PMID:26919979, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5882483, RGD:13792537 NCBI chr 1:196,857,490...196,883,907
Ensembl chr 1:196,857,461...196,884,302
JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase IEA
IBA
ISS
ISO
GO_REF:0000002
PMID:21873635
GO_REF:0000024
(PMID:18086888)
InterPro
UniProt
RGD
PMID:18086888, PMID:21873635 GO_REF:0000002, GO_REF:0000024, RGD:13792537 NCBI chr 7:99,677,295...99,900,765
Ensembl chr 7:99,677,290...99,900,764
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component ISO (PMID:18086888), (PMID:27427983) RGD PMID:18086888, PMID:27427983 NCBI chr 1:125,663,987...125,665,314 JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component ISO
IBA
(PMID:18086888)
PMID:21873635
RGD PMID:18086888, PMID:21873635 RGD:13792537 NCBI chr 1:201,103,750...201,110,838
Ensembl chr 1:201,096,059...201,110,928
JBrowse link
G Smc5 structural maintenance of chromosomes 5 ISO (PMID:18086888)
(MGI:MGI:5882483|PMID:26919979)
RGD PMID:18086888, PMID:26919979 MGI:MGI:5882483 NCBI chr 1:240,977,898...241,046,273
Ensembl chr 1:240,977,898...241,046,256
JBrowse link
G Smc6 structural maintenance of chromosomes 6 ISO (PMID:18086888)
(MGI:MGI:5882483|PMID:26919979)
RGD PMID:18086888, PMID:26919979 MGI:MGI:5882483 NCBI chr 6:36,941,233...36,995,920
Ensembl chr 6:36,941,233...36,995,138
JBrowse link
synaptonemal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1ip1 cyclin B1 interacting protein 1 colocalizes_with ISO (MGI:MGI:5545848|PMID:24390283) RGD PMID:24390283 MGI:MGI:5545848 NCBI chr15:27,720,220...27,736,528
Ensembl chr15:27,720,223...27,733,785
JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 ISO
ISS
(MGI:MGI:2662793|PMID:12764197)
GO_REF:0000024
RGD
UniProt
PMID:12764197 GO_REF:0000024, MGI:MGI:2662793 NCBI chr12:24,365,941...24,438,088
Ensembl chr12:24,367,199...24,438,019
JBrowse link
G Hormad1 HORMA domain containing 1 ISO (MGI:MGI:5504589|PMID:22854038) RGD PMID:22854038 MGI:MGI:5504589 NCBI chr 2:197,681,820...197,720,197
Ensembl chr 2:197,682,000...197,719,254
JBrowse link
G Hormad2 HORMA domain containing 2 ISO (MGI:MGI:5504589|PMID:22854038) RGD PMID:22854038 MGI:MGI:5504589 NCBI chr14:84,576,856...84,662,237
Ensembl chr14:84,576,825...84,662,222
JBrowse link
G Hspa2 heat shock protein family A (Hsp70) member 2 ISO (MGI:MGI:82564|PMID:8622925) RGD PMID:8622925 MGI:MGI:82564 NCBI chr 6:99,433,575...99,436,288
Ensembl chr 6:99,433,550...99,436,289
JBrowse link
G Incenp inner centromere protein ISO (MGI:MGI:2653770|PMID:12584241) RGD PMID:12584241 MGI:MGI:2653770 NCBI chr 1:225,923,448...225,953,384
Ensembl chr 1:225,925,773...225,952,516
JBrowse link
G Lig3 DNA ligase 3 ISO (MGI:MGI:85057|PMID:9001252) RGD PMID:9001252 MGI:MGI:85057 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G LOC100366231 X-linked lymphocyte-regulated 5C-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:147,060,791...147,076,946
Ensembl chr 1:146,976,975...146,989,858
Ensembl chr 1:146,976,975...146,989,858
JBrowse link
G LOC100911002 synaptonemal complex protein 3-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:146,972,526...146,989,856
Ensembl chr 1:146,976,975...146,989,858
Ensembl chr 1:146,976,975...146,989,858
JBrowse link
G LOC100911047 X-linked lymphocyte-regulated protein 3A-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:147,000,037...147,012,436
Ensembl chr 1:147,003,850...147,011,657
JBrowse link
G LOC103690322 X-linked lymphocyte-regulated protein 3A-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:153,072,908...153,080,915 JBrowse link
G Mlh1 mutL homolog 1 IDA
ISO
IEA
PMID:16968740
(MGI:MGI:3056006|PMID:15467367), (MGI:MGI:3612193|PMID:16260499)
GO_REF:0000107
RGD
Ensembl
PMID:15467367, PMID:16260499, PMID:16968740 GO_REF:0000107, MGI:MGI:3056006, MGI:MGI:3612193, RGD:8554354 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mlh3 mutL homolog 3 ISO (MGI:MGI:3056006|PMID:15467367), (MGI:MGI:3612193|PMID:16260499) RGD PMID:15467367, PMID:16260499 MGI:MGI:3056006, MGI:MGI:3612193 NCBI chr 6:109,059,386...109,095,876
Ensembl chr 6:109,059,341...109,095,557
JBrowse link
G Msh4 mutS homolog 4 ISO
IBA
(MGI:MGI:1858570|PMID:10809667), (MGI:MGI:3612193|PMID:16260499)
PMID:21873635
RGD PMID:10809667, PMID:16260499, PMID:21873635 MGI:MGI:1858570, MGI:MGI:3612193, RGD:13792537 NCBI chr 2:260,057,708...260,108,897
Ensembl chr 2:260,057,855...260,108,897
JBrowse link
G Msh5 mutS homolog 5 ISO (MGI:MGI:3612193|PMID:16260499) RGD PMID:16260499 MGI:MGI:3612193 NCBI chr20:5,020,690...5,037,125
Ensembl chr20:5,020,667...5,037,088
JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 IDA RGD PMID:1363622 RGD:633987 NCBI chr10:88,318,231...88,325,326
Ensembl chr10:88,318,817...88,325,326
JBrowse link
G Plk1 polo-like kinase 1 ISO
IEA
(MGI:MGI:5504589|PMID:22854038)
GO_REF:0000107
RGD
Ensembl
PMID:22854038 GO_REF:0000107, MGI:MGI:5504589 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
G Rad21 RAD21 cohesin complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO
IBA
(MGI:MGI:2667549|PMID:12759374)
PMID:21873635
RGD PMID:12759374, PMID:21873635 MGI:MGI:2667549, RGD:13792537 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G RGD1559891 similar to synaptonemal complex protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:201,901,213...201,903,582
Ensembl chr 1:201,901,342...201,902,031
JBrowse link
G Rnf212 ring finger protein 212 colocalizes_with ISO
IBA
(MGI:MGI:5487470|PMID:23396135), (MGI:MGI:5545848|PMID:24390283)
PMID:21873635
RGD PMID:23396135, PMID:24390283, PMID:21873635 MGI:MGI:5487470, MGI:MGI:5545848, RGD:13792537 NCBI chr14:1,959,148...1,998,077
Ensembl chr14:1,959,610...1,998,102
JBrowse link
G Smc1b structural maintenance of chromosomes 1B ISO (MGI:MGI:2150452|PMID:11564881), (MGI:MGI:3664716|PMID:16968740) RGD PMID:11564881, PMID:16968740 MGI:MGI:2150452, MGI:MGI:3664716 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Stag3 stromal antigen 3 TAS
ISO
(MGI:MGI:1354041|PMID:10698974) RGD PMID:10698974, PMID:11599053 MGI:MGI:1354041, RGD:727325 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
G Syce1 synaptonemal complex central element protein 1 IDA
IBA
PMID:16968740
PMID:21873635
MGI
GO_Central
PMID:16968740, PMID:21873635 RGD:8554354, RGD:13792537 NCBI chr 1:213,523,638...213,534,641
Ensembl chr 1:213,523,639...213,534,641
JBrowse link
G Syce1l synaptonemal complex central element protein 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:45,946,422...45,956,822
Ensembl chr19:45,946,236...45,956,844
JBrowse link
G Sycp1 synaptonemal complex protein 1 IDA
ISO
(MGI:MGI:2664436|PMID:12815066), (MGI:MGI:3579731|PMID:15937223), (MGI:MGI:3664716|PMID:16968740), (MGI:MGI:3719060|PMID:17696610), (MGI:MGI:3771519|PMID:18070917), (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5314623|PMID:22011390), (MGI:MGI:5661094|PMID:25675407), (MGI:MGI:5697228|PMID:26358182), (MGI:MGI:5700253|PMID:26490168), (MGI:MGI:5805564|PMID:27760146), (MGI:MGI:5811689|PMID:27856912), (MGI:MGI:5824447|PMID:27473657) RGD PMID:12815066, PMID:15937223, PMID:16968740, PMID:17696610, PMID:18070917, PMID:18316482, PMID:20551173, PMID:22011390, PMID:25675407, PMID:26358182, PMID:26490168, PMID:27473657, PMID:27760146, PMID:27856912, PMID:8660935 MGI:MGI:2664436, MGI:MGI:3579731, MGI:MGI:3664716, MGI:MGI:3719060, MGI:MGI:3771519, MGI:MGI:3774244, MGI:MGI:4457793, MGI:MGI:5314623, MGI:MGI:5661094, MGI:MGI:5697228, MGI:MGI:5700253, MGI:MGI:5805564, MGI:MGI:5811689, MGI:MGI:5824447, RGD:9686370 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Sycp2 synaptonemal complex protein 2 IDA
ISO
(MGI:MGI:3774244|PMID:18316482), (MGI:MGI:5692009|PMID:26362258) RGD PMID:18316482, PMID:26362258, PMID:9592139 MGI:MGI:3774244, MGI:MGI:5692009, RGD:69387 NCBI chr 3:173,884,559...173,948,304
Ensembl chr 3:173,884,287...173,947,018
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO
IBA
(PMID:9774970)
PMID:21873635
(MGI:MGI:2664436|PMID:12815066), (MGI:MGI:3027482|PMID:14736746), (MGI:MGI:3528534|PMID:15657431), (MGI:MGI:3615835|PMID:16428451), (MGI:MGI:3664716|PMID:16968740), (MGI:MGI:3695528|PMID:17141210), (MGI:MGI:3719060|PMID:17696610), (MGI:MGI:3770581|PMID:17912366), (MGI:MGI:3771519|PMID:18070917), (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5504589|PMID:22854038), (MGI:MGI:5509253|PMID:23810942), (MGI:MGI:5697228|PMID:26358182), (MGI:MGI:5700253|PMID:26490168), (MGI:MGI:5805564|PMID:27760146), (MGI:MGI:5811689|PMID:27856912), (MGI:MGI:5824447|PMID:27473657)
RGD PMID:9774970, PMID:12815066, PMID:14736746, PMID:15657431, PMID:16428451, PMID:16968740, PMID:17141210, PMID:17696610, PMID:17912366, PMID:18070917, PMID:20551173, PMID:22854038, PMID:23810942, PMID:26358182, PMID:26490168, PMID:27473657, PMID:27760146, PMID:27856912, PMID:21873635 MGI:MGI:2664436, MGI:MGI:3027482, MGI:MGI:3528534, MGI:MGI:3615835, MGI:MGI:3664716, MGI:MGI:3695528, MGI:MGI:3719060, MGI:MGI:3770581, MGI:MGI:3771519, MGI:MGI:4457793, MGI:MGI:5504589, MGI:MGI:5509253, MGI:MGI:5697228, MGI:MGI:5700253, MGI:MGI:5805564, MGI:MGI:5811689, MGI:MGI:5824447, RGD:13792537 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
G Syn1 synapsin I ISO (MGI:MGI:3027482|PMID:14736746) RGD PMID:14736746 MGI:MGI:3027482 NCBI chr  X:1,321,315...1,379,202
Ensembl chr  X:1,321,315...1,379,198
JBrowse link
G Tex11 testis expressed 11 colocalizes_with ISO
IBA
(MGI:MGI:3797180|PMID:18369460)
PMID:21873635
RGD PMID:18369460, PMID:21873635 MGI:MGI:3797180, RGD:13792537 NCBI chr  X:70,670,212...70,946,621
Ensembl chr  X:70,670,322...70,946,565
JBrowse link
G Tex12 testis expressed 12 ISO (MGI:MGI:3664716|PMID:16968740) RGD PMID:16968740 MGI:MGI:3664716 NCBI chr 8:54,991,501...54,999,454
Ensembl chr 8:54,992,841...54,994,871
JBrowse link
G Wapl WAPL cohesin release factor ISO (MGI:MGI:3525912|PMID:15620708) RGD PMID:15620708 MGI:MGI:3525912 NCBI chr16:11,029,325...11,108,867
Ensembl chr16:11,032,531...11,106,589
JBrowse link
G Xlr3a X-linked lymphocyte-regulated 3A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:147,033,269...147,050,622
Ensembl chr 1:147,034,668...147,046,809
JBrowse link
G Xlr4a X-linked lymphocyte-regulated 4A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:153,072,965...153,081,324
Ensembl chr  X:153,072,908...153,080,915
JBrowse link
transverse filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stag3 stromal antigen 3 ISO (MGI:MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:MGI:3578071 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
G Sycp1 synaptonemal complex protein 1 IDA
IBA
ISO
IEA
PMID:21873635
(MGI:MGI:3578071|PMID:15870106), (MGI:MGI:3794139|PMID:18283110), (MGI:MGI:5049827|PMID:21539824), (MGI:MGI:5428050|PMID:22711701)
GO_REF:0000107
RGD
Ensembl
PMID:15870106, PMID:18283110, PMID:21539824, PMID:22711701, PMID:1464329, PMID:21873635 GO_REF:0000107, MGI:MGI:3578071, MGI:MGI:3794139, MGI:MGI:5049827, MGI:MGI:5428050, RGD:729937, RGD:13792537 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO (MGI:MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:MGI:3578071 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      organelle 13271
        non-membrane-bounded organelle 5196
          intracellular non-membrane-bounded organelle 5179
            chromosome 1424
              condensed chromosome 202
                Smc5-Smc6 complex 7
                cohesin complex + 11
                condensed chromosome, centromeric region + 92
                condensed nuclear chromosome + 111
                condensin complex + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.