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Gene: Sycp2l (synaptonemal complex protein 2-like) Rattus norvegicus
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Symbol: Sycp2l
Name: synaptonemal complex protein 2-like
Description: Predicted to be involved in negative regulation of cell death. Predicted to localize to the condensed nuclear chromosome, centromeric region; lateral element; and nucleoplasm. Orthologous to human SYCP2L (synaptonemal complex protein 2 like); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); butanal (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC364688; LOW QUALITY PROTEIN: synaptonemal complex protein 2-like; RGD1564922; similar to OTTHUMP00000039249; similar to Synaptonemal complex protein 2 (SCP-2) (Synaptonemal complex lateral element protein)
Orthologs:
Homo sapiens (human) : SYCP2L (synaptonemal complex protein 2 like)  HGNC  Alliance
Mus musculus (house mouse) : Sycp2l (synaptonemal complex protein 2-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sycp2l (synaptonemal complex protein 2 like)
Canis lupus familiaris (dog) : SYCP2L (synaptonemal complex protein 2 like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sycp2l (synaptonemal complex protein 2 like)
Sus scrofa (pig) : SYCP2L (synaptonemal complex protein 2 like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01721,430,470 - 21,486,091 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01723,410,100 - 23,468,644 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41729,536,991 - 29,598,175 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1723,264,191 - 23,319,515 (-)NCBICelera
Cytogenetic Map17p14-p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sycp2l
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564922
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.