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Gene: Sec13 (SEC13 homolog, nuclear pore and COPII coat complex component) Rattus norvegicus
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Symbol: Sec13
Name: SEC13 homolog, nuclear pore and COPII coat complex component
Description: Predicted to have identical protein binding activity. Involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Localizes to the cytosol and nuclear pore. Predicted to colocalize with the kinetochore. Orthologous to human SEC13 (SEC13 homolog, nuclear pore and COPII coat complex component); PARTICIPATES IN mRNA nuclear export pathway; Endoplasmic Reticulum-associated degradation pathway; RNA transport pathway; INTERACTS WITH 17alpha-ethynylestradiol; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: GATOR complex protein SEC13; MGC105923; SEC13 homolog; SEC13 homolog (S. cerevisiae); SEC13 homolog, nuclear pore and COPII coating complex component; SEC13-like 1; SEC13-like 1 (S. cerevisiae); SEC13-like protein 1; Sec13l1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04145,686,186 - 145,699,577 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04208,982,585 - 208,995,976 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44149,637,058 - 149,650,449 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14149,881,901 - 149,895,290 (-)NCBI
Celera4135,432,416 - 135,445,807 (-)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sec13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359555
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.