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Gene: Nanog (Nanog homeobox) Rattus norvegicus
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Symbol: Nanog
Name: Nanog homeobox
Description: Predicted to have several functions, including DNA binding activity; DNA-binding transcription activator activity, RNA polymerase II-specific; and RNA polymerase II sequence-specific DNA-binding transcription factor recruiting activity. Involved in several processes, including cellular response to erythropoietin; cellular response to rapamycin; and multidimensional cell growth. Localizes to the nucleus. Used to study colon cancer. Orthologous to several human genes including NANOG (Nanog homeobox); PARTICIPATES IN DNA modification pathway; INTERACTS WITH 1,2-dimethylhydrazine; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: homeobox protein NANOG
Orthologs:
Homo sapiens (human) : NANOG (Nanog homeobox)  HGNC  Alliance
Mus musculus (house mouse) : Nanog (Nanog homeobox)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nanog (Nanog homeobox)
Pan paniscus (bonobo/pygmy chimpanzee) : NANOG (Nanog homeobox)
Canis lupus familiaris (dog) : NANOG (Nanog homeobox)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nanog (Nanog homeobox)
Sus scrofa (pig) : NANOG (Nanog homeobox)
more info ...
Is Marker For: Strains:   WIC-Tg(Nanog-YFP*)1Utr  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04155,531,906 - 155,539,268 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04222,552,995 - 222,560,653 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44159,190,786 - 159,198,160 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14159,438,699 - 159,441,754 (+)NCBI
Celera4144,763,722 - 144,771,060 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nanog
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303178
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.