Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:condensed nuclear chromosome
go back to main search page
Accession:GO:0000794 term browser browse the term
Definition:A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct nuclear chromosome.
Comment:Note that this term and its children can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes a 'closed mitosis' in which the nuclear envelope does not break down during mitosis and for gene products that localize to a meiotic chromosome.
Synonyms:related_synonym: meiotic chromosome;   nuclear mitotic chromosome


show annotations for term's descendants           Sort by:
 
condensed nuclear chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07048387.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:76,240,167...76,261,198 JBrowse link
G Add3 adducin 3 ISO
IEA
(MGI:MGI:80989|PMID:1864459)
GO_REF:0000107
RGD
Ensembl
PMID:1864459 GO_REF:0000107, MGI:MGI:80989 NCBI chr 1:273,854,195...273,961,982
Ensembl chr 1:273,854,248...273,961,982
JBrowse link
G Ago3 argonaute RISC catalytic component 3 ISO (MGI:MGI:5437526|PMID:22863743) RGD PMID:22863743 MGI:MGI:5437526 NCBI chr 5:144,355,792...144,436,509
Ensembl chr 5:144,364,269...144,436,509
JBrowse link
G Brca1 BRCA1, DNA repair associated ISO (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5700253|PMID:26490168) RGD PMID:20551173, PMID:26490168 MGI:MGI:4457793, MGI:MGI:5700253 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Brd4 bromodomain containing 4 ISO (PMID:10938129)
(MGI:MGI:1888422|PMID:10938129), (MGI:MGI:3654777|PMID:16339075), (MGI:MGI:3771631|PMID:18039861)
RGD PMID:10938129, PMID:16339075, PMID:18039861 MGI:MGI:1888422, MGI:MGI:3654777, MGI:MGI:3771631 NCBI chr 7:14,222,101...14,303,055
Ensembl chr 7:14,222,101...14,303,055
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 ISO (MGI:MGI:5606256|PMID:24891606) RGD PMID:24891606 MGI:MGI:5606256 NCBI chr15:27,720,220...27,736,528
Ensembl chr15:27,720,223...27,733,785
JBrowse link
G Cdx2 caudal type homeo box 2 ISO (MGI:MGI:3056244|PMID:15509711) RGD PMID:15509711 MGI:MGI:3056244 NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565
JBrowse link
G Chek1 checkpoint kinase 1 ISO
ISS
(PMID:9382850)
GO_REF:0000024
RGD
UniProt
PMID:9382850 GO_REF:0000024 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Chmp1a charged multivesicular body protein 1A ISO (PMID:11559747) RGD PMID:11559747 NCBI chr19:56,001,724...56,010,004
Ensembl chr19:56,001,724...56,010,004
JBrowse link
G Dmc1 DNA meiotic recombinase 1 ISO
IBA
(MGI:MGI:3774244|PMID:18316482), (MGI:MGI:3794139|PMID:18283110), (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5428050|PMID:22711701), (MGI:MGI:5586966|PMID:22530760), (MGI:MGI:5805564|PMID:27760146)
PMID:21873635
RGD PMID:18283110, PMID:18316482, PMID:20551173, PMID:22164254, PMID:22530760, PMID:22711701, PMID:27760146, PMID:21873635 MGI:MGI:3774244, MGI:MGI:3794139, MGI:MGI:4457793, MGI:MGI:5315075, MGI:MGI:5428050, MGI:MGI:5586966, MGI:MGI:5805564, RGD:13792537 NCBI chr 7:120,796,217...120,840,524
Ensembl chr 7:120,796,217...120,839,577
JBrowse link
G Dnmt3l DNA methyltransferase 3 like ISO
IEA
(MGI:MGI:3623538|PMID:16543361)
GO_REF:0000107
RGD
Ensembl
PMID:16543361 GO_REF:0000107, MGI:MGI:3623538 NCBI chr20:11,344,513...11,359,090
Ensembl chr20:11,344,514...11,359,090
JBrowse link
G H1f6 H1.6 linker histone, cluster member ISO (MGI:MGI:3774244|PMID:18316482) RGD PMID:18316482 MGI:MGI:3774244 NCBI chr17:43,675,190...43,675,934
Ensembl chr17:43,675,190...43,675,934
JBrowse link
G H2ax H2A.X variant histone ISO (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5428050|PMID:22711701), (MGI:MGI:5477835|PMID:23555294), (MGI:MGI:5700253|PMID:26490168) RGD PMID:20551173, PMID:22164254, PMID:22711701, PMID:23555294, PMID:26490168 MGI:MGI:4457793, MGI:MGI:5315075, MGI:MGI:5428050, MGI:MGI:5477835, MGI:MGI:5700253 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G Hormad1 HORMA domain containing 1 ISO (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5586966|PMID:22530760) RGD PMID:22164254, PMID:22530760 MGI:MGI:5315075, MGI:MGI:5586966 NCBI chr 2:197,681,820...197,720,197
Ensembl chr 2:197,682,000...197,719,254
JBrowse link
G Iho1 interactor of HORMAD1 1 ISO
IBA
(MGI:MGI:5822944|PMID:27723721)
PMID:21873635
RGD PMID:27723721, PMID:21873635 MGI:MGI:5822944, RGD:13792537 NCBI chr 8:117,182,484...117,215,390
Ensembl chr 8:117,183,343...117,211,170
JBrowse link
G Kifap3 kinesin-associated protein 3 ISO (PMID:16298999) RGD PMID:16298999 NCBI chr13:82,072,497...82,217,256
Ensembl chr13:82,072,497...82,217,252
JBrowse link
G Lig3 DNA ligase 3 ISO (MGI:MGI:85057|PMID:9001252) RGD PMID:9001252 MGI:MGI:85057 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Lrpprc leucine-rich pentatricopeptide repeat containing ISO
ISS
(PMID:12762840)
GO_REF:0000024
RGD
HGNC
PMID:12762840 GO_REF:0000024 NCBI chr 6:7,984,043...8,066,874
Ensembl chr 6:7,984,019...8,066,868
JBrowse link
G Mlh1 mutL homolog 1 ISO (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:5477835|PMID:23555294), (MGI:MGI:5606256|PMID:24891606) RGD PMID:18316482, PMID:23555294, PMID:24891606 MGI:MGI:3774244, MGI:MGI:5477835, MGI:MGI:5606256 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mlh3 mutL homolog 3 ISO (MGI:MGI:5606256|PMID:24891606) RGD PMID:24891606 MGI:MGI:5606256 NCBI chr 6:109,059,386...109,095,876
Ensembl chr 6:109,059,341...109,095,557
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease IDA sex vesicles/chromatin of XY bivalent RGD PMID:10855503 RGD:2300257 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Msh4 mutS homolog 4 ISO (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5477835|PMID:23555294) RGD PMID:18316482, PMID:22164254, PMID:23555294 MGI:MGI:3774244, MGI:MGI:5315075, MGI:MGI:5477835 NCBI chr 2:260,057,708...260,108,897
Ensembl chr 2:260,057,855...260,108,897
JBrowse link
G Nek2 NIMA-related kinase 2 ISO (MGI:MGI:3057231|PMID:15479717) RGD PMID:15479717 MGI:MGI:3057231 NCBI chr13:110,511,546...110,524,750
Ensembl chr13:110,511,668...110,522,769
JBrowse link
G Nifk nucleolar protein interacting with the FHA domain of MKI67 ISO (PMID:11342549) RGD PMID:11342549 NCBI chr13:34,267,442...34,277,543
Ensembl chr13:34,267,471...34,277,530
JBrowse link
G Nol6 nucleolar protein 6 ISO (MGI:MGI:2179879|PMID:11895476) RGD PMID:11895476 MGI:MGI:2179879 NCBI chr 5:57,444,448...57,473,803
Ensembl chr 5:57,445,344...57,455,018
JBrowse link
G Rad21 RAD21 cohesin complex component ISO (MGI:MGI:5575825|PMID:24797475) RGD PMID:24797475 MGI:MGI:5575825 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 ISO (MGI:MGI:5575825|PMID:24797475) RGD PMID:24797475 MGI:MGI:5575825 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rad50 RAD50 double strand break repair protein IDA
IBA
sex vesicles/chromatin of XY bivalent
PMID:21873635
RGD
GO_Central
PMID:10855503, PMID:21873635 RGD:2300257, RGD:13792537 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Rad51 RAD51 recombinase ISO
IBA
(MGI:MGI:3027988|PMID:14668445), (MGI:MGI:3794139|PMID:18283110), (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5477835|PMID:23555294), (MGI:MGI:5586966|PMID:22530760), (MGI:MGI:5606256|PMID:24891606), (MGI:MGI:5700253|PMID:26490168), (MGI:MGI:5805564|PMID:27760146)
PMID:21873635
RGD PMID:14668445, PMID:18283110, PMID:20551173, PMID:22164254, PMID:22530760, PMID:23555294, PMID:24891606, PMID:26490168, PMID:27760146, PMID:21873635 MGI:MGI:3027988, MGI:MGI:3794139, MGI:MGI:4457793, MGI:MGI:5315075, MGI:MGI:5477835, MGI:MGI:5586966, MGI:MGI:5606256, MGI:MGI:5700253, MGI:MGI:5805564, RGD:13792537 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rcc1 regulator of chromosome condensation 1 ISO (PMID:15014043) RGD PMID:15014043 NCBI chr 5:150,508,840...150,531,062
Ensembl chr 5:150,509,040...150,525,254
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:MGI:3771209|PMID:18084284), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5575825|PMID:24797475) RGD PMID:18084284, PMID:22164254, PMID:24797475 MGI:MGI:3771209, MGI:MGI:5315075, MGI:MGI:5575825 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Rpa1 replication protein A1 ISO (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:3794139|PMID:18283110), (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5315075|PMID:22164254) RGD PMID:18283110, PMID:18316482, PMID:20551173, PMID:22164254 MGI:MGI:3774244, MGI:MGI:3794139, MGI:MGI:4457793, MGI:MGI:5315075 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Rrs1 ribosome biogenesis regulator 1 homolog ISO (PMID:19465021) RGD PMID:19465021 NCBI chr 5:9,430,710...9,432,343
Ensembl chr 5:9,430,728...9,432,343
JBrowse link
G Rsph1 radial spoke head component 1 ISO (MGI:MGI:1203866|PMID:9578619) RGD PMID:9578619 MGI:MGI:1203866 NCBI chr20:9,998,698...10,020,719
Ensembl chr20:9,998,701...10,013,559
JBrowse link
G Shoc1 shortage in chiasmata 1 ISO (MGI:MGI:6159552|PMID:29742103) RGD PMID:29742103 MGI:MGI:6159552 NCBI chr 5:76,190,486...76,298,723 JBrowse link
G Smc1b structural maintenance of chromosomes 1B ISO (MGI:MGI:5315075|PMID:22164254) RGD PMID:22164254 MGI:MGI:5315075 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Stag3 stromal antigen 3 ISO (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5575825|PMID:24797475) RGD PMID:22164254, PMID:24797475 MGI:MGI:5315075, MGI:MGI:5575825 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 ISO (MGI:MGI:3708891|PMID:17452644) RGD PMID:17452644 MGI:MGI:3708891 NCBI chr 7:120,950,391...120,967,583
Ensembl chr 7:120,951,560...120,967,490
JBrowse link
G Sycp1 synaptonemal complex protein 1 ISO (MGI:MGI:5437526|PMID:22863743), (MGI:MGI:5504589|PMID:22854038), (MGI:MGI:5567006|PMID:24589552), (MGI:MGI:5606256|PMID:24891606) RGD PMID:22854038, PMID:22863743, PMID:24589552, PMID:24891606 MGI:MGI:5437526, MGI:MGI:5504589, MGI:MGI:5567006, MGI:MGI:5606256 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:5285037|PMID:21621532), (MGI:MGI:5437526|PMID:22863743), (MGI:MGI:5567006|PMID:24589552), (MGI:MGI:5606256|PMID:24891606) RGD PMID:18316482, PMID:21621532, PMID:22863743, PMID:24589552, PMID:24891606 MGI:MGI:3774244, MGI:MGI:5285037, MGI:MGI:5437526, MGI:MGI:5567006, MGI:MGI:5606256 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
G Tex11 testis expressed 11 ISO (MGI:MGI:3774244|PMID:18316482) RGD PMID:18316482 MGI:MGI:3774244 NCBI chr  X:70,670,212...70,946,621
Ensembl chr  X:70,670,322...70,946,565
JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 ISO (MGI:MGI:3042347|PMID:14718568) RGD PMID:14718568 MGI:MGI:3042347 NCBI chr 8:111,790,655...111,835,224
Ensembl chr 8:111,790,678...111,827,151
JBrowse link
G Ttn titin ISO (PMID:9548712) RGD PMID:9548712 NCBI chr 3:63,565,160...63,837,815 JBrowse link
G Tubg1 tubulin, gamma 1 ISO (MGI:MGI:3688382|PMID:15007207) RGD PMID:15007207 MGI:MGI:3688382 NCBI chr10:89,030,865...89,037,455
Ensembl chr10:89,030,865...89,037,455
JBrowse link
central element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Incenp inner centromere protein ISO (MGI:MGI:2653770|PMID:12584241) RGD PMID:12584241 MGI:MGI:2653770 NCBI chr 1:225,923,448...225,953,384
Ensembl chr 1:225,925,773...225,952,516
JBrowse link
G Six6os1 Six6 opposite strand transcript 1 ISO
IBA
(MGI:MGI:5822939|PMID:27796301)
PMID:21873635
RGD PMID:27796301, PMID:21873635 MGI:MGI:5822939, RGD:13792537 NCBI chr 6:95,761,718...95,797,314
Ensembl chr 6:95,762,332...95,796,502
JBrowse link
G Syce1 synaptonemal complex central element protein 1 ISO (MGI:MGI:3581466|PMID:15944401), (MGI:MGI:5315075|PMID:22164254) RGD PMID:15944401, PMID:22164254 MGI:MGI:3581466, MGI:MGI:5315075 NCBI chr 1:213,523,638...213,534,641
Ensembl chr 1:213,523,639...213,534,641
JBrowse link
G Syce2 synaptonemal complex central element protein 2 ISO
IBA
(MGI:MGI:3581466|PMID:15944401), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5504589|PMID:22854038)
PMID:21873635
RGD PMID:15944401, PMID:22164254, PMID:22854038, PMID:21873635 MGI:MGI:3581466, MGI:MGI:5315075, MGI:MGI:5504589, RGD:13792537 NCBI chr19:25,982,003...26,002,399
Ensembl chr19:25,983,169...26,001,317
JBrowse link
G Syce3 synaptonemal complex central element protein 3 ISO
IBA
(MGI:MGI:5008660|PMID:21637789), (MGI:MGI:5315075|PMID:22164254)
PMID:21873635
RGD PMID:21637789, PMID:22164254, PMID:21873635 MGI:MGI:5008660, MGI:MGI:5315075, RGD:13792537 NCBI chr 7:130,360,511...130,386,673
Ensembl chr 7:130,360,517...130,368,819
JBrowse link
G Sycp1 synaptonemal complex protein 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:MGI:2653770|PMID:12584241), (MGI:MGI:5470363|PMID:23133398)
Ensembl
RGD
PMID:12584241, PMID:23133398, PMID:21873635 GO_REF:0000107, MGI:MGI:2653770, MGI:MGI:5470363, RGD:13792537 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Tex11 testis expressed 11 ISO
IBA
(MGI:MGI:3774244|PMID:18316482)
PMID:21873635
RGD PMID:18316482, PMID:21873635 MGI:MGI:3774244, RGD:13792537 NCBI chr  X:70,670,212...70,946,621
Ensembl chr  X:70,670,322...70,946,565
JBrowse link
G Tex12 testis expressed 12 ISO
IBA
(MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5504589|PMID:22854038)
PMID:21873635
RGD PMID:22164254, PMID:22854038, PMID:21873635 MGI:MGI:5315075, MGI:MGI:5504589, RGD:13792537 NCBI chr 8:54,991,501...54,999,454
Ensembl chr 8:54,992,841...54,994,871
JBrowse link
checkpoint clamp complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hus1 HUS1 checkpoint clamp component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:89,194,086...89,208,825
Ensembl chr14:89,194,092...89,208,825
JBrowse link
G LOC103690165 checkpoint protein HUS1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:34,691,084...34,694,690
Ensembl chr17:34,693,597...34,694,690
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:60,461,513...60,469,646
Ensembl chr 2:60,461,551...60,469,685
JBrowse link
G Rad9a RAD9 checkpoint clamp component A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:219,443,347...219,450,574
Ensembl chr 1:219,444,092...219,450,451
JBrowse link
G Rad9b RAD9 checkpoint clamp component B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:39,699,076...39,731,218
Ensembl chr12:39,699,181...39,729,516
JBrowse link
chiasma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:MGI:3707920|PMID:17291760), (MGI:MGI:3719060|PMID:17696610), (MGI:MGI:5288570|PMID:21743440)
Ensembl
RGD
PMID:17291760, PMID:17696610, PMID:21743440, PMID:21873635 GO_REF:0000107, MGI:MGI:3707920, MGI:MGI:3719060, MGI:MGI:5288570, RGD:13792537 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mlh3 mutL homolog 3 ISO (MGI:MGI:2183707|PMID:12091911), (MGI:MGI:3719060|PMID:17696610) RGD PMID:12091911, PMID:17696610 MGI:MGI:2183707, MGI:MGI:3719060 NCBI chr 6:109,059,386...109,095,876
Ensembl chr 6:109,059,341...109,095,557
JBrowse link
condensed nuclear chromosome inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpk centromere protein K IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:34,312,766...34,373,945
Ensembl chr 2:34,312,766...34,335,776
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
condensed nuclear chromosome kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ISO
IBA
(MGI:MGI:3806388|PMID:18765791)
PMID:21873635
RGD PMID:18765791, PMID:21873635 MGI:MGI:3806388, RGD:13792537 NCBI chr 3:110,367,949...110,420,471
Ensembl chr 3:110,367,939...110,420,458
JBrowse link
G Cenpa centromere protein A ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 6:27,072,259...27,080,863
Ensembl chr 6:27,072,166...27,080,856
JBrowse link
G Cenpc centromere protein C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:23,611,909...23,670,314
Ensembl chr14:23,611,735...23,670,475
JBrowse link
G Cenpe centromere protein E ISO (MGI:MGI:3806388|PMID:18765791) RGD PMID:18765791 MGI:MGI:3806388 NCBI chr 2:240,395,974...240,454,785
Ensembl chr 2:240,396,152...240,454,747
JBrowse link
G Cenpo centromere protein O IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:28,648,804...28,663,527
Ensembl chr 6:28,649,638...28,663,233
JBrowse link
G Cenpt centromere protein T IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,813,284...37,819,782
Ensembl chr19:37,812,751...37,819,789
JBrowse link
G Mis18bp1 MIS18 binding protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:86,879,106...86,925,209
Ensembl chr 6:86,879,719...86,924,146
JBrowse link
G Ndc80 NDC80 kinetochore complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:87,818,456...87,847,223
Ensembl chr13:87,818,391...87,847,263
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 ISO (MGI:MGI:6378311|PMID:28410192) RGD PMID:28410192 MGI:MGI:6378311 NCBI chr14:106,008,086...106,062,566
Ensembl chr14:106,008,086...106,061,641
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:MGI:3806388|PMID:18765791) RGD PMID:18765791 MGI:MGI:3806388 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
condensed nuclear chromosome outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase ISO (PMID:24055156) RGD PMID:24055156 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Ccnb1 cyclin B1 ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Plk1 polo-like kinase 1 ISO
IEA
(PMID:18195732)
GO_REF:0000107
RGD
Ensembl
PMID:18195732 GO_REF:0000107 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
late recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 ISO
IEA
(MGI:MGI:5805564|PMID:27760146)
GO_REF:0000107
RGD
Ensembl
PMID:27760146 GO_REF:0000107, MGI:MGI:5805564 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
lateral element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027258.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:21,430,337...21,484,456 JBrowse link
G Blm BLM RecQ like helicase ISO (PMID:10728666) RGD PMID:10728666 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Brca1 BRCA1, DNA repair associated IEA
ISO
GO_REF:0000107
(PMID:9774970)
Ensembl
RGD
PMID:9774970 GO_REF:0000107 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Brca2 BRCA2, DNA repair associated IEA
ISO
GO_REF:0000107
(PMID:9774970)
Ensembl
RGD
PMID:9774970 GO_REF:0000107 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Incenp inner centromere protein ISO (MGI:MGI:3839184|PMID:19283064) RGD PMID:19283064 MGI:MGI:3839184 NCBI chr 1:225,923,448...225,953,384
Ensembl chr 1:225,925,773...225,952,516
JBrowse link
G Kash5 KASH domain containing 5 ISO
IBA
(MGI:MGI:5515826|PMID:24062341)
PMID:21873635
RGD PMID:24062341, PMID:21873635 MGI:MGI:5515826, RGD:13792537 NCBI chr 1:101,180,497...101,203,048
Ensembl chr 1:101,180,657...101,198,801
JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 ISO
IBA
(MGI:MGI:4457793|PMID:20551173)
PMID:21873635
RGD PMID:20551173, PMID:21873635 MGI:MGI:4457793, RGD:13792537 NCBI chr 8:89,369,417...89,556,942
Ensembl chr 8:89,369,417...89,556,942
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 ISO (MGI:MGI:5288570|PMID:21743440) RGD PMID:21743440 MGI:MGI:5288570 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rad51 RAD51 recombinase ISO (PMID:9774970)
(MGI:MGI:3813746|PMID:18694567), (MGI:MGI:5288570|PMID:21743440)
RGD PMID:9774970, PMID:18694567, PMID:21743440 MGI:MGI:3813746, MGI:MGI:5288570 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:MGI:3578071 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Rpa1 replication protein A1 ISO (MGI:MGI:5288570|PMID:21743440), (MGI:MGI:5428050|PMID:22711701) RGD PMID:21743440, PMID:22711701 MGI:MGI:5288570, MGI:MGI:5428050 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Smc1b structural maintenance of chromosomes 1B ISO (MGI:MGI:3578071|PMID:15870106), (MGI:MGI:5428050|PMID:22711701) RGD PMID:15870106, PMID:22711701 MGI:MGI:3578071, MGI:MGI:5428050 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Smc3 structural maintenance of chromosomes 3 IEA
ISO
GO_REF:0000107
(MGI:MGI:3578071|PMID:15870106), (MGI:MGI:5428050|PMID:22711701)
Ensembl
RGD
PMID:15870106, PMID:22711701 GO_REF:0000107, MGI:MGI:3578071, MGI:MGI:5428050 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Stag3 stromal antigen 3 ISO (MGI:MGI:5428050|PMID:22711701) RGD PMID:22711701 MGI:MGI:5428050 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
G Sycp2 synaptonemal complex protein 2 IDA
IBA
ISO
PMID:9933407
PMID:21873635
(MGI:MGI:3794139|PMID:18283110), (MGI:MGI:5314623|PMID:22011390), (MGI:MGI:5428050|PMID:22711701), (MGI:MGI:5470363|PMID:23133398)
RGD PMID:18283110, PMID:22011390, PMID:22711701, PMID:23133398, PMID:9933407, PMID:21873635 MGI:MGI:3794139, MGI:MGI:5314623, MGI:MGI:5428050, MGI:MGI:5470363, RGD:11035335, RGD:13792537 NCBI chr 3:173,884,559...173,948,304
Ensembl chr 3:173,884,287...173,947,018
JBrowse link
G Sycp2l synaptonemal complex protein 2-like ISO (MGI:MGI:5692009|PMID:26362258) RGD PMID:26362258 MGI:MGI:5692009 NCBI chr17:21,430,470...21,486,091 JBrowse link
G Sycp3 synaptonemal complex protein 3 IDA
ISO
PMID:9933407
(MGI:MGI:1352918|PMID:10678170), (MGI:MGI:3839184|PMID:19283064), (MGI:MGI:4452449|PMID:18802469), (MGI:MGI:5049827|PMID:21539824), (MGI:MGI:5288570|PMID:21743440), (MGI:MGI:5314623|PMID:22011390), (MGI:MGI:5428050|PMID:22711701), (MGI:MGI:5470363|PMID:23133398), (MGI:MGI:5477835|PMID:23555294), (MGI:MGI:5504589|PMID:22854038), (MGI:MGI:5609844|PMID:25533956), (MGI:MGI:5661094|PMID:25675407)
RGD PMID:10678170, PMID:18802469, PMID:19283064, PMID:21539824, PMID:21743440, PMID:22011390, PMID:22711701, PMID:22854038, PMID:23133398, PMID:23555294, PMID:25533956, PMID:25675407, PMID:9933407 MGI:MGI:1352918, MGI:MGI:3839184, MGI:MGI:4452449, MGI:MGI:5049827, MGI:MGI:5288570, MGI:MGI:5314623, MGI:MGI:5428050, MGI:MGI:5470363, MGI:MGI:5477835, MGI:MGI:5504589, MGI:MGI:5609844, MGI:MGI:5661094, RGD:11035335 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
nuclear condensin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncapd2 non-SMC condensin I complex, subunit D2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:157,682,855...157,705,903
Ensembl chr 4:157,683,077...157,704,596
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 ISO
IBA
(PMID:14532007)
PMID:21873635
RGD PMID:14532007, PMID:21873635 RGD:13792537 NCBI chr 8:28,075,629...28,145,024
Ensembl chr 8:28,075,551...28,144,741
JBrowse link
G Ncaph non-SMC condensin I complex, subunit H IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:119,583,798...119,611,148
Ensembl chr 3:119,583,648...119,611,136
JBrowse link
G Smc4 structural maintenance of chromosomes 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:165,600,934...165,629,415
Ensembl chr 2:165,601,007...165,629,415
JBrowse link
nuclear meiotic cohesin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad21 RAD21 cohesin complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 ISO
IBA
(MGI:MGI:5315075|PMID:22164254)
PMID:21873635
RGD PMID:22164254, PMID:21873635 MGI:MGI:5315075, RGD:13792537 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO
IBA
(MGI:MGI:5288570|PMID:21743440), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5504589|PMID:22854038)
PMID:21873635
RGD PMID:21743440, PMID:22164254, PMID:22854038, PMID:21873635 MGI:MGI:5288570, MGI:MGI:5315075, MGI:MGI:5504589, RGD:13792537 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Smc1b structural maintenance of chromosomes 1B ISO (MGI:MGI:5288570|PMID:21743440), (MGI:MGI:5315075|PMID:22164254) RGD PMID:21743440, PMID:22164254 MGI:MGI:5288570, MGI:MGI:5315075 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Smc3 structural maintenance of chromosomes 3 IEA
ISO
GO_REF:0000107
(MGI:MGI:5288570|PMID:21743440), (MGI:MGI:5315075|PMID:22164254)
Ensembl
RGD
PMID:21743440, PMID:22164254 GO_REF:0000107, MGI:MGI:5288570, MGI:MGI:5315075 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Stag3 stromal antigen 3 ISO (MGI:MGI:5315075|PMID:22164254) RGD PMID:22164254 MGI:MGI:5315075 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
nuclear MIS12/MIND complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsn1 DSN1 component of MIS12 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
G Mis12 MIS12 kinetochore complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,653,685...57,661,833
Ensembl chr10:57,660,067...57,660,687
JBrowse link
G Pmf1 polyamine-modulated factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:187,751,770...187,771,933
Ensembl chr 2:187,751,776...187,771,865
JBrowse link
nuclear mitotic cohesin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad21 RAD21 cohesin complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rec8 REC8 meiotic recombination protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
recombination nodule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh4 mutS homolog 4 ISO (MGI:MGI:5805564|PMID:27760146) RGD PMID:27760146 MGI:MGI:5805564 NCBI chr 2:260,057,708...260,108,897
Ensembl chr 2:260,057,855...260,108,897
JBrowse link
synaptonemal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1ip1 cyclin B1 interacting protein 1 colocalizes_with ISO (MGI:MGI:5545848|PMID:24390283) RGD PMID:24390283 MGI:MGI:5545848 NCBI chr15:27,720,220...27,736,528
Ensembl chr15:27,720,223...27,733,785
JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 ISO
ISS
(MGI:MGI:2662793|PMID:12764197)
GO_REF:0000024
RGD
UniProt
PMID:12764197 GO_REF:0000024, MGI:MGI:2662793 NCBI chr12:24,365,941...24,438,088
Ensembl chr12:24,367,199...24,438,019
JBrowse link
G Hormad1 HORMA domain containing 1 ISO (MGI:MGI:5504589|PMID:22854038) RGD PMID:22854038 MGI:MGI:5504589 NCBI chr 2:197,681,820...197,720,197
Ensembl chr 2:197,682,000...197,719,254
JBrowse link
G Hormad2 HORMA domain containing 2 ISO (MGI:MGI:5504589|PMID:22854038) RGD PMID:22854038 MGI:MGI:5504589 NCBI chr14:84,576,856...84,662,237
Ensembl chr14:84,576,825...84,662,222
JBrowse link
G Hspa2 heat shock protein family A (Hsp70) member 2 ISO (MGI:MGI:82564|PMID:8622925) RGD PMID:8622925 MGI:MGI:82564 NCBI chr 6:99,433,575...99,436,288
Ensembl chr 6:99,433,550...99,436,289
JBrowse link
G Incenp inner centromere protein ISO (MGI:MGI:2653770|PMID:12584241) RGD PMID:12584241 MGI:MGI:2653770 NCBI chr 1:225,923,448...225,953,384
Ensembl chr 1:225,925,773...225,952,516
JBrowse link
G Lig3 DNA ligase 3 ISO (MGI:MGI:85057|PMID:9001252) RGD PMID:9001252 MGI:MGI:85057 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G LOC100366231 X-linked lymphocyte-regulated 5C-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:147,060,791...147,076,946
Ensembl chr 1:146,976,975...146,989,858
Ensembl chr 1:146,976,975...146,989,858
JBrowse link
G LOC100911002 synaptonemal complex protein 3-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:146,972,526...146,989,856
Ensembl chr 1:146,976,975...146,989,858
Ensembl chr 1:146,976,975...146,989,858
JBrowse link
G LOC100911047 X-linked lymphocyte-regulated protein 3A-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:147,000,037...147,012,436
Ensembl chr 1:147,003,850...147,011,657
JBrowse link
G LOC103690322 X-linked lymphocyte-regulated protein 3A-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:153,072,908...153,080,915 JBrowse link
G Mlh1 mutL homolog 1 IDA
ISO
IEA
PMID:16968740
(MGI:MGI:3056006|PMID:15467367), (MGI:MGI:3612193|PMID:16260499)
GO_REF:0000107
RGD
Ensembl
PMID:15467367, PMID:16260499, PMID:16968740 GO_REF:0000107, MGI:MGI:3056006, MGI:MGI:3612193, RGD:8554354 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mlh3 mutL homolog 3 ISO (MGI:MGI:3056006|PMID:15467367), (MGI:MGI:3612193|PMID:16260499) RGD PMID:15467367, PMID:16260499 MGI:MGI:3056006, MGI:MGI:3612193 NCBI chr 6:109,059,386...109,095,876
Ensembl chr 6:109,059,341...109,095,557
JBrowse link
G Msh4 mutS homolog 4 ISO
IBA
(MGI:MGI:1858570|PMID:10809667), (MGI:MGI:3612193|PMID:16260499)
PMID:21873635
RGD PMID:10809667, PMID:16260499, PMID:21873635 MGI:MGI:1858570, MGI:MGI:3612193, RGD:13792537 NCBI chr 2:260,057,708...260,108,897
Ensembl chr 2:260,057,855...260,108,897
JBrowse link
G Msh5 mutS homolog 5 ISO (MGI:MGI:3612193|PMID:16260499) RGD PMID:16260499 MGI:MGI:3612193 NCBI chr20:5,020,690...5,037,125
Ensembl chr20:5,020,667...5,037,088
JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 IDA RGD PMID:1363622 RGD:633987 NCBI chr10:88,318,231...88,325,326
Ensembl chr10:88,318,817...88,325,326
JBrowse link
G Plk1 polo-like kinase 1 ISO
IEA
(MGI:MGI:5504589|PMID:22854038)
GO_REF:0000107
RGD
Ensembl
PMID:22854038 GO_REF:0000107, MGI:MGI:5504589 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
G Rad21 RAD21 cohesin complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO
IBA
(MGI:MGI:2667549|PMID:12759374)
PMID:21873635
RGD PMID:12759374, PMID:21873635 MGI:MGI:2667549, RGD:13792537 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G RGD1559891 similar to synaptonemal complex protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:201,901,213...201,903,582
Ensembl chr 1:201,901,342...201,902,031
JBrowse link
G Rnf212 ring finger protein 212 colocalizes_with ISO
IBA
(MGI:MGI:5487470|PMID:23396135), (MGI:MGI:5545848|PMID:24390283)
PMID:21873635
RGD PMID:23396135, PMID:24390283, PMID:21873635 MGI:MGI:5487470, MGI:MGI:5545848, RGD:13792537 NCBI chr14:1,959,148...1,998,077
Ensembl chr14:1,959,610...1,998,102
JBrowse link
G Smc1b structural maintenance of chromosomes 1B ISO (MGI:MGI:2150452|PMID:11564881), (MGI:MGI:3664716|PMID:16968740) RGD PMID:11564881, PMID:16968740 MGI:MGI:2150452, MGI:MGI:3664716 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Stag3 stromal antigen 3 TAS
ISO
(MGI:MGI:1354041|PMID:10698974) RGD PMID:10698974, PMID:11599053 MGI:MGI:1354041, RGD:727325 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
G Syce1 synaptonemal complex central element protein 1 IDA
IBA
PMID:16968740
PMID:21873635
MGI
GO_Central
PMID:16968740, PMID:21873635 RGD:8554354, RGD:13792537 NCBI chr 1:213,523,638...213,534,641
Ensembl chr 1:213,523,639...213,534,641
JBrowse link
G Syce1l synaptonemal complex central element protein 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:45,946,422...45,956,822
Ensembl chr19:45,946,236...45,956,844
JBrowse link
G Sycp1 synaptonemal complex protein 1 IDA
ISO
(MGI:MGI:2664436|PMID:12815066), (MGI:MGI:3579731|PMID:15937223), (MGI:MGI:3664716|PMID:16968740), (MGI:MGI:3719060|PMID:17696610), (MGI:MGI:3771519|PMID:18070917), (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5314623|PMID:22011390), (MGI:MGI:5661094|PMID:25675407), (MGI:MGI:5697228|PMID:26358182), (MGI:MGI:5700253|PMID:26490168), (MGI:MGI:5805564|PMID:27760146), (MGI:MGI:5811689|PMID:27856912), (MGI:MGI:5824447|PMID:27473657) RGD PMID:12815066, PMID:15937223, PMID:16968740, PMID:17696610, PMID:18070917, PMID:18316482, PMID:20551173, PMID:22011390, PMID:25675407, PMID:26358182, PMID:26490168, PMID:27473657, PMID:27760146, PMID:27856912, PMID:8660935 MGI:MGI:2664436, MGI:MGI:3579731, MGI:MGI:3664716, MGI:MGI:3719060, MGI:MGI:3771519, MGI:MGI:3774244, MGI:MGI:4457793, MGI:MGI:5314623, MGI:MGI:5661094, MGI:MGI:5697228, MGI:MGI:5700253, MGI:MGI:5805564, MGI:MGI:5811689, MGI:MGI:5824447, RGD:9686370 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Sycp2 synaptonemal complex protein 2 IDA
ISO
(MGI:MGI:3774244|PMID:18316482), (MGI:MGI:5692009|PMID:26362258) RGD PMID:18316482, PMID:26362258, PMID:9592139 MGI:MGI:3774244, MGI:MGI:5692009, RGD:69387 NCBI chr 3:173,884,559...173,948,304
Ensembl chr 3:173,884,287...173,947,018
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO
IBA
(PMID:9774970)
PMID:21873635
(MGI:MGI:2664436|PMID:12815066), (MGI:MGI:3027482|PMID:14736746), (MGI:MGI:3528534|PMID:15657431), (MGI:MGI:3615835|PMID:16428451), (MGI:MGI:3664716|PMID:16968740), (MGI:MGI:3695528|PMID:17141210), (MGI:MGI:3719060|PMID:17696610), (MGI:MGI:3770581|PMID:17912366), (MGI:MGI:3771519|PMID:18070917), (MGI:MGI:4457793|PMID:20551173), (MGI:MGI:5504589|PMID:22854038), (MGI:MGI:5509253|PMID:23810942), (MGI:MGI:5697228|PMID:26358182), (MGI:MGI:5700253|PMID:26490168), (MGI:MGI:5805564|PMID:27760146), (MGI:MGI:5811689|PMID:27856912), (MGI:MGI:5824447|PMID:27473657)
RGD PMID:9774970, PMID:12815066, PMID:14736746, PMID:15657431, PMID:16428451, PMID:16968740, PMID:17141210, PMID:17696610, PMID:17912366, PMID:18070917, PMID:20551173, PMID:22854038, PMID:23810942, PMID:26358182, PMID:26490168, PMID:27473657, PMID:27760146, PMID:27856912, PMID:21873635 MGI:MGI:2664436, MGI:MGI:3027482, MGI:MGI:3528534, MGI:MGI:3615835, MGI:MGI:3664716, MGI:MGI:3695528, MGI:MGI:3719060, MGI:MGI:3770581, MGI:MGI:3771519, MGI:MGI:4457793, MGI:MGI:5504589, MGI:MGI:5509253, MGI:MGI:5697228, MGI:MGI:5700253, MGI:MGI:5805564, MGI:MGI:5811689, MGI:MGI:5824447, RGD:13792537 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
G Syn1 synapsin I ISO (MGI:MGI:3027482|PMID:14736746) RGD PMID:14736746 MGI:MGI:3027482 NCBI chr  X:1,321,315...1,379,202
Ensembl chr  X:1,321,315...1,379,198
JBrowse link
G Tex11 testis expressed 11 colocalizes_with ISO
IBA
(MGI:MGI:3797180|PMID:18369460)
PMID:21873635
RGD PMID:18369460, PMID:21873635 MGI:MGI:3797180, RGD:13792537 NCBI chr  X:70,670,212...70,946,621
Ensembl chr  X:70,670,322...70,946,565
JBrowse link
G Tex12 testis expressed 12 ISO (MGI:MGI:3664716|PMID:16968740) RGD PMID:16968740 MGI:MGI:3664716 NCBI chr 8:54,991,501...54,999,454
Ensembl chr 8:54,992,841...54,994,871
JBrowse link
G Wapl WAPL cohesin release factor ISO (MGI:MGI:3525912|PMID:15620708) RGD PMID:15620708 MGI:MGI:3525912 NCBI chr16:11,029,325...11,108,867
Ensembl chr16:11,032,531...11,106,589
JBrowse link
G Xlr3a X-linked lymphocyte-regulated 3A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:147,033,269...147,050,622
Ensembl chr 1:147,034,668...147,046,809
JBrowse link
G Xlr4a X-linked lymphocyte-regulated 4A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:153,072,965...153,081,324
Ensembl chr  X:153,072,908...153,080,915
JBrowse link
transverse filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stag3 stromal antigen 3 ISO (MGI:MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:MGI:3578071 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
G Sycp1 synaptonemal complex protein 1 IDA
IBA
ISO
IEA
PMID:21873635
(MGI:MGI:3578071|PMID:15870106), (MGI:MGI:3794139|PMID:18283110), (MGI:MGI:5049827|PMID:21539824), (MGI:MGI:5428050|PMID:22711701)
GO_REF:0000107
RGD
Ensembl
PMID:15870106, PMID:18283110, PMID:21539824, PMID:22711701, PMID:1464329, PMID:21873635 GO_REF:0000107, MGI:MGI:3578071, MGI:MGI:3794139, MGI:MGI:5049827, MGI:MGI:5428050, RGD:729937, RGD:13792537 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO (MGI:MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:MGI:3578071 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      organelle 13271
        non-membrane-bounded organelle 5195
          intracellular non-membrane-bounded organelle 5178
            chromosome 1423
              nuclear chromosome 248
                condensed nuclear chromosome 100
                  checkpoint clamp complex 5
                  chiasma 2
                  condensed nuclear chromosome kinetochore + 18
                  meiotic recombination initiation complex 0
                  nuclear cohesin complex + 6
                  nuclear condensin complex 4
                  pairing center 0
                  recombination nodule + 2
                  synapsis initiation complex 0
                  synaptonemal structure + 48
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      organelle 13271
        intracellular organelle 12917
          intracellular membrane-bounded organelle 10505
            nucleus 6974
              nuclear lumen 3869
                nuclear chromosome 248
                  condensed nuclear chromosome 100
                    checkpoint clamp complex 5
                    chiasma 2
                    condensed nuclear chromosome kinetochore + 18
                    meiotic recombination initiation complex 0
                    nuclear cohesin complex + 6
                    nuclear condensin complex 4
                    pairing center 0
                    recombination nodule + 2
                    synapsis initiation complex 0
                    synaptonemal structure + 48
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.