Gpatch11 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 6 | 21,982,074 - 21,995,562 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 16,229,933 - 16,243,305 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 16,233,059 - 16,243,238 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 16,542,293 - 16,552,463 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 16,864,501 - 16,874,671 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 16,345,431 - 16,355,636 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 1,410,461 - 1,421,506 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 1,410,507 - 1,423,041 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 1,401,697 - 1,412,259 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 1,619,937 - 1,630,116 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 1,619,941 - 1,629,692 (+) | NCBI | | | | | Celera | 6 | 15,888,195 - 15,898,395 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q12 | NCBI | | | | |
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GPATCH11 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 2 | 37,084,518 - 37,099,244 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 37,084,518 - 37,099,244 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 37,311,661 - 37,326,387 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 37,165,165 - 37,177,206 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 2 | 37,152,623 - 37,164,767 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | p22.2 | NCBI | | | | | HuRef | 2 | 37,051,794 - 37,066,588 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 37,240,939 - 37,255,733 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 37,091,653 - 37,106,376 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Gpatch11 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 17 | 79,142,951 - 79,155,737 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 17 | 79,142,996 - 79,155,737 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 17 | 78,835,516 - 78,848,308 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 17 | 78,835,567 - 78,848,308 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 17 | 79,234,856 - 79,247,648 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 17 | 78,740,647 - 78,753,366 (+) | NCBI | | MGSCv36 | mm8 | | MGSCv36 | 17 | 78,091,174 - 78,103,893 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 17 | 83,152,129 - 83,164,888 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | E3 | NCBI | | | | | cM Map | 17 | 49.54 | NCBI | | | | |
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Gpatch11 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955441 | 4,879,338 - 4,891,807 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955441 | 4,879,410 - 4,890,775 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GPATCH11 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 12 | 89,378,452 - 89,397,011 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 89,382,428 - 89,400,987 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 37,110,121 - 37,125,223 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 37,874,996 - 37,888,341 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 37,874,996 - 37,888,341 (+) | Ensembl | panpan1.1 | | panPan2 | |
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GPATCH11 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 17 | 29,478,352 - 29,489,207 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 29,293,020 - 29,306,050 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 30,128,549 - 30,141,590 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 30,128,550 - 30,141,586 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 17 | 29,356,108 - 29,369,134 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 29,419,150 - 29,432,176 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 29,637,238 - 29,650,269 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Gpatch11 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024406292 | 42,500,653 - 42,511,747 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936663 | 1,167,025 - 1,177,226 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936663 | 1,167,105 - 1,177,197 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GPATCH11 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 3 | 103,098,588 - 103,119,512 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 103,100,083 - 103,111,998 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 109,679,720 - 109,691,696 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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GPATCH11 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 14 | 70,302,399 - 70,309,392 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 70,302,511 - 70,314,491 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 41,638,281 - 41,653,325 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Gpatch11 (Heterocephalus glaber - naked mole-rat) |
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