Kifap3 (kinesin-associated protein 3) - Rat Genome Database

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Pathways
Gene: Kifap3 (kinesin-associated protein 3) Rattus norvegicus
Analyze
Symbol: Kifap3
Name: kinesin-associated protein 3
RGD ID: 1305191
Description: Predicted to enable intraciliary transport particle B binding activity; kinesin binding activity; and protein phosphatase binding activity. Predicted to be involved in cilium organization and microtubule-based movement. Predicted to act upstream of or within several processes, including negative regulation of apoptotic process; negative regulation of neuroblast proliferation; and positive regulation of calcium-dependent cell-cell adhesion. Predicted to be located in several cellular components, including microtubule organizing center; periciliary membrane compartment; and photoreceptor cell cilium. Predicted to be part of kinesin II complex. Predicted to be active in axoneme and ciliary transition zone. Predicted to colocalize with spindle microtubule. Orthologous to human KIFAP3 (kinesin associated protein 3); INTERACTS WITH 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC289168
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21376,127,702 - 76,264,654 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1376,127,696 - 76,264,650 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1378,756,196 - 78,882,717 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01380,065,273 - 80,187,049 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01377,319,837 - 77,441,633 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01382,072,497 - 82,217,256 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1382,072,497 - 82,217,252 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01386,953,053 - 87,089,644 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41379,544,010 - 79,673,768 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11379,558,313 - 79,686,817 (+)NCBI
Celera1375,872,613 - 75,998,359 (+)NCBICelera
Cytogenetic Map13q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8710890   PMID:10793158   PMID:12821668   PMID:15834408   PMID:16298999   PMID:18703627   PMID:19384852   PMID:21037580   PMID:23376485   PMID:24338362  


Genomics

Comparative Map Data
Kifap3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21376,127,702 - 76,264,654 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1376,127,696 - 76,264,650 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1378,756,196 - 78,882,717 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01380,065,273 - 80,187,049 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01377,319,837 - 77,441,633 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01382,072,497 - 82,217,256 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1382,072,497 - 82,217,252 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01386,953,053 - 87,089,644 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41379,544,010 - 79,673,768 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11379,558,313 - 79,686,817 (+)NCBI
Celera1375,872,613 - 75,998,359 (+)NCBICelera
Cytogenetic Map13q22NCBI
KIFAP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381169,921,329 - 170,085,184 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1169,921,326 - 170,085,208 (-)EnsemblGRCh38hg38GRCh38
GRCh371169,890,470 - 170,043,836 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361168,157,094 - 168,310,503 (-)NCBINCBI36Build 36hg18NCBI36
Build 341166,622,127 - 166,775,537NCBI
Celera1143,000,253 - 143,153,688 (-)NCBICelera
Cytogenetic Map1q24.2NCBI
HuRef1141,112,974 - 141,266,563 (-)NCBIHuRef
CHM1_11171,312,642 - 171,466,210 (-)NCBICHM1_1
T2T-CHM13v2.01169,277,046 - 169,441,099 (-)NCBIT2T-CHM13v2.0
Kifap3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391163,589,711 - 163,744,676 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1163,607,152 - 163,744,678 (+)EnsemblGRCm39 Ensembl
GRCm381163,762,138 - 163,917,107 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1163,779,583 - 163,917,109 (+)EnsemblGRCm38mm10GRCm38
MGSCv371165,709,810 - 165,847,231 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361165,616,354 - 165,753,775 (+)NCBIMGSCv36mm8
Celera1166,219,175 - 166,357,571 (+)NCBICelera
Cytogenetic Map1H2.1NCBI
cM Map171.08NCBI
KIFAP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1179,349,883 - 79,513,734 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01145,410,755 - 145,564,248 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11149,127,544 - 149,280,831 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1149,127,548 - 149,280,831 (-)Ensemblpanpan1.1panPan2
KIFAP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1728,581,855 - 28,739,327 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl728,593,425 - 28,739,272 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha728,113,580 - 28,271,198 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0728,383,601 - 28,541,435 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl728,395,164 - 28,542,155 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1728,232,563 - 28,390,147 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0728,267,598 - 28,425,374 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0728,504,316 - 28,661,873 (+)NCBIUU_Cfam_GSD_1.0
Kifap3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934498,789,040 - 98,930,697 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648116,663,974 - 16,779,428 (+)EnsemblSpeTri2.0
SpeTri2.0NW_00493648116,664,025 - 16,777,440 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIFAP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl480,921,682 - 81,108,360 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1480,922,032 - 81,105,135 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2488,552,950 - 88,734,332 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIFAP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12558,983,180 - 59,130,431 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2558,983,207 - 59,130,074 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605560,638,540 - 60,786,174 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kifap3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480510,416,095 - 10,504,234 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480510,381,217 - 10,521,349 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kifap3
904 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:167
Count of miRNA genes:123
Interacting mature miRNAs:146
Transcripts:ENSRNOT00000063810
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
12879444Bp397Blood pressure QTL 397arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134504940490049404Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134551471990514719Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)135949252277046890Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)135987440885581182Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)136906051977046890Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)136906051986800898Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)136906051986800898Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)136906051986800898Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)137402391880753406Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137402391897213863Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)137486211785581182Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1374862117101339893Rat

Markers in Region
RH130610  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21376,264,454 - 76,264,654 (+)MAPPERmRatBN7.2
Rnor_6.01382,217,057 - 82,217,256NCBIRnor6.0
Rnor_5.01387,089,449 - 87,089,648UniSTSRnor5.0
RGSC_v3.41379,673,573 - 79,673,772UniSTSRGSC3.4
Celera1375,998,164 - 75,998,363UniSTS
RH 3.4 Map13477.1UniSTS
Cytogenetic Map13q22UniSTS
RH141990  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21376,263,577 - 76,263,770 (+)MAPPERmRatBN7.2
Rnor_6.01382,216,180 - 82,216,372NCBIRnor6.0
Rnor_5.01387,088,572 - 87,088,764UniSTSRnor5.0
RGSC_v3.41379,672,696 - 79,672,888UniSTSRGSC3.4
Celera1375,997,287 - 75,997,479UniSTS
RH 3.4 Map13481.4UniSTS
Cytogenetic Map13q22UniSTS
AA850497  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21376,263,866 - 76,264,046 (+)MAPPERmRatBN7.2
Rnor_6.01382,216,469 - 82,216,648NCBIRnor6.0
Rnor_5.01387,088,861 - 87,089,040UniSTSRnor5.0
RGSC_v3.41379,672,985 - 79,673,164UniSTSRGSC3.4
Celera1375,997,576 - 75,997,755UniSTS
RH 3.4 Map13475.8UniSTS
Cytogenetic Map13q22UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 34 28 12 18 12 8 10 74 35 41 11 8
Low 9 29 29 1 29 1
Below cutoff

Sequence


RefSeq Acc Id: ENSRNOT00000063810   ⟹   ENSRNOP00000063896
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1376,137,978 - 76,264,650 (+)Ensembl
Rnor_6.0 Ensembl1382,072,497 - 82,217,252 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000085135   ⟹   ENSRNOP00000071523
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1376,127,696 - 76,263,916 (+)Ensembl
Rnor_6.0 Ensembl1382,072,596 - 82,212,157 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000095640   ⟹   ENSRNOP00000093594
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1376,140,727 - 76,238,102 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000102502   ⟹   ENSRNOP00000085155
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1376,145,245 - 76,238,102 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000112619   ⟹   ENSRNOP00000082498
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1376,138,171 - 76,264,647 (+)Ensembl
RefSeq Acc Id: NM_001401347   ⟹   NP_001388276
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21376,138,123 - 76,264,654 (+)NCBI
RefSeq Acc Id: XM_039090489   ⟹   XP_038946417
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21376,127,702 - 76,264,654 (+)NCBI
RefSeq Acc Id: XM_039090490   ⟹   XP_038946418
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21376,127,702 - 76,263,919 (+)NCBI
RefSeq Acc Id: XM_039090491   ⟹   XP_038946419
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21376,127,702 - 76,256,409 (+)NCBI
RefSeq Acc Id: ENSRNOP00000071523   ⟸   ENSRNOT00000085135
RefSeq Acc Id: ENSRNOP00000063896   ⟸   ENSRNOT00000063810
RefSeq Acc Id: XP_038946417   ⟸   XM_039090489
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K0P1 (UniProtKB/TrEMBL),   A0A8I5ZXB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946418   ⟸   XM_039090490
- Peptide Label: isoform X3
- UniProtKB: A6IDC5 (UniProtKB/TrEMBL),   D3ZWA5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946419   ⟸   XM_039090491
- Peptide Label: isoform X4
- UniProtKB: A0A8I5ZXB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000085155   ⟸   ENSRNOT00000102502
RefSeq Acc Id: ENSRNOP00000093594   ⟸   ENSRNOT00000095640
RefSeq Acc Id: ENSRNOP00000082498   ⟸   ENSRNOT00000112619
RefSeq Acc Id: NP_001388276   ⟸   NM_001401347
- UniProtKB: A0A8I5ZXB9 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K0P1-F1-model_v2 AlphaFold A0A0G2K0P1 1-773 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698959
Promoter ID:EPDNEW_R9474
Type:initiation region
Name:Kifap3_2
Description:kinesin-associated protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9475  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01382,072,599 - 82,072,659EPDNEW
RGD ID:13698950
Promoter ID:EPDNEW_R9475
Type:multiple initiation site
Name:Kifap3_1
Description:kinesin-associated protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9474  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01382,072,809 - 82,072,869EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305191 AgrOrtholog
BioCyc Gene G2FUF-17621 BioCyc
Ensembl Genes ENSRNOG00000002544 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000063810.4 UniProtKB/TrEMBL
  ENSRNOT00000085135 ENTREZGENE
  ENSRNOT00000085135.2 UniProtKB/TrEMBL
  ENSRNOT00000095640 ENTREZGENE
  ENSRNOT00000095640.1 UniProtKB/TrEMBL
  ENSRNOT00000102502.1 UniProtKB/TrEMBL
  ENSRNOT00000112619 ENTREZGENE
  ENSRNOT00000112619.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Armadillo UniProtKB/TrEMBL
  KAP UniProtKB/TrEMBL
KEGG Report rno:289168 UniProtKB/TrEMBL
NCBI Gene 289168 ENTREZGENE
PANTHER KAP UniProtKB/TrEMBL
  KINESIN-ASSOCIATED PROTEIN 3 UniProtKB/TrEMBL
Pfam KAP UniProtKB/TrEMBL
PhenoGen Kifap3 PhenoGen
PROSITE ARM_REPEAT UniProtKB/TrEMBL
RatGTEx ENSRNOG00000002544 RatGTEx
SMART ARM UniProtKB/TrEMBL
  KAP UniProtKB/TrEMBL
Superfamily-SCOP ARM-type_fold UniProtKB/TrEMBL
UniProt A0A0G2K0P1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZXB9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A2N6_RAT UniProtKB/TrEMBL
  A0A8I6AJW9_RAT UniProtKB/TrEMBL
  A6IDC5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZWA5 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Kifap3  kinesin-associated protein 3   Kifap3_predicted  kinesin-associated protein 3 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Kifap3_predicted  kinesin-associated protein 3 (predicted)      Symbol and Name status set to approved 70820 APPROVED