Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:condensed chromosome, centromeric region
go back to main search page
Accession:GO:0000779 term browser browse the term
Definition:The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
Comment:Note that this term can be used in place of the obsolete cellular component term 'centromere ; GO:0005698'. Use with caution because this term refers to a specific region of the chromosome and not a protein complex.
Synonyms:exact_synonym: condensed chromosome, centric region
 narrow_synonym: condensed nuclear chromosome, centromeric region
 related_synonym: condensed chromosome, centromere;   condensed chromosome, pericentric region
 alt_id: GO:0000780


show annotations for term's descendants           Sort by:
 
condensed chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027258.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:21,430,337...21,484,456 JBrowse link
G Atrx ATRX, chromatin remodeler ISO
IEA
(MGI:MGI:3052396|PMID:15242786)
GO_REF:0000107
RGD
Ensembl
PMID:15242786 GO_REF:0000107, MGI:MGI:3052396 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Aurka aurora kinase A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210
JBrowse link
G Aurkb aurora kinase B ISO
IBA
(MGI:MGI:3044098|PMID:14751927)
PMID:21873635
(PMID:19465021)
RGD PMID:14751927, PMID:19465021, PMID:21873635 MGI:MGI:3044098, RGD:13792537 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Aurkc aurora kinase C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,958,452...69,964,546
Ensembl chr 1:69,958,452...69,963,592
JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase ISO (MGI:MGI:3771209|PMID:18084284), (MGI:MGI:4415638|PMID:19965387) RGD PMID:18084284, PMID:19965387 MGI:MGI:3771209, MGI:MGI:4415638 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Cbx3 chromobox 3 ISO (MGI:MGI:3777546|PMID:11124534) RGD PMID:11124534 MGI:MGI:3777546 NCBI chr 4:81,243,809...81,257,898
Ensembl chr 4:81,244,469...81,257,897
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta ISO (MGI:MGI:4947203|PMID:21122806) RGD PMID:21122806 MGI:MGI:4947203 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cenpa centromere protein A ISO (MGI:MGI:3052396|PMID:15242786)
(PMID:11682612)
RGD PMID:11682612, PMID:15242786 MGI:MGI:3052396 NCBI chr 6:27,072,259...27,080,863
Ensembl chr 6:27,072,166...27,080,856
JBrowse link
G Cenpb centromere protein B ISO (MGI:MGI:3052396|PMID:15242786) RGD PMID:15242786 MGI:MGI:3052396 NCBI chr 3:123,720,888...123,723,520
Ensembl chr 3:123,721,486...123,723,524
JBrowse link
G Cenpc centromere protein C ISO (MGI:MGI:3052396|PMID:15242786)
(PMID:11682612)
RGD PMID:11682612, PMID:15242786 MGI:MGI:3052396 NCBI chr14:23,611,909...23,670,314
Ensembl chr14:23,611,735...23,670,475
JBrowse link
G Cenpe centromere protein E ISO (PMID:19465021) RGD PMID:19465021 NCBI chr 2:240,395,974...240,454,785
Ensembl chr 2:240,396,152...240,454,747
JBrowse link
G Kmt5b lysine methyltransferase 5B ISO (MGI:MGI:3043964|PMID:15145825) RGD PMID:15145825 MGI:MGI:3043964 NCBI chr 1:219,000,844...219,050,211
Ensembl chr 1:219,000,844...219,050,211
JBrowse link
G Kmt5c lysine methyltransferase 5C ISO (MGI:MGI:3043964|PMID:15145825) RGD PMID:15145825 MGI:MGI:3043964 NCBI chr 1:72,666,662...72,674,271
Ensembl chr 1:72,666,665...72,674,271
JBrowse link
G Meikin meiotic kinetochore factor ISO
IBA
(MGI:MGI:5609844|PMID:25533956)
PMID:21873635
RGD PMID:25533956, PMID:21873635 MGI:MGI:5609844, RGD:13792537 NCBI chr10:39,726,373...39,776,458
Ensembl chr10:39,726,507...39,751,398
JBrowse link
G Ncapd2 non-SMC condensin I complex, subunit D2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:157,682,855...157,705,903
Ensembl chr 4:157,683,077...157,704,596
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:28,075,629...28,145,024
Ensembl chr 8:28,075,551...28,144,741
JBrowse link
G Ncapg non-SMC condensin I complex, subunit G ISO (MGI:MGI:5317363|PMID:21795393) RGD PMID:21795393 MGI:MGI:5317363 NCBI chr14:69,898,268...69,927,885
Ensembl chr14:69,899,128...69,927,938
JBrowse link
G Plk1 polo-like kinase 1 ISO (MGI:MGI:5504589|PMID:22854038) RGD PMID:22854038 MGI:MGI:5504589 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
G Rad21 RAD21 cohesin complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO
IBA
(MGI:MGI:3771209|PMID:18084284), (MGI:MGI:5288570|PMID:21743440)
PMID:21873635
RGD PMID:18084284, PMID:21743440, PMID:21873635 MGI:MGI:3771209, MGI:MGI:5288570, RGD:13792537 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Sgo1 shugoshin 1 ISO
IBA
(MGI:MGI:3771209|PMID:18084284)
PMID:21873635
(PMID:19465021)
RGD PMID:18084284, PMID:19465021, PMID:21873635 MGI:MGI:3771209, RGD:13792537 NCBI chr 9:4,420,158...4,435,939
Ensembl chr 9:4,421,069...4,436,601
JBrowse link
G Sgo2 shugoshin 2 ISO
IBA
(MGI:MGI:3771209|PMID:18084284), (MGI:MGI:3806388|PMID:18765791), (MGI:MGI:3839184|PMID:19283064), (MGI:MGI:5609844|PMID:25533956)
PMID:21873635
RGD PMID:18084284, PMID:18765791, PMID:19283064, PMID:25533956, PMID:21873635 MGI:MGI:3771209, MGI:MGI:3806388, MGI:MGI:3839184, MGI:MGI:5609844, RGD:13792537 NCBI chr 9:64,898,380...64,923,023
Ensembl chr 9:64,898,459...64,923,012
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex ISO (MGI:MGI:3774244|PMID:18316482), (MGI:MGI:3794139|PMID:18283110), (MGI:MGI:5315075|PMID:22164254), (MGI:MGI:5606256|PMID:24891606) RGD PMID:18283110, PMID:18316482, PMID:22164254, PMID:24891606 MGI:MGI:3774244, MGI:MGI:3794139, MGI:MGI:5315075, MGI:MGI:5606256 NCBI chr 3:175,426,754...175,445,222
Ensembl chr 3:175,426,752...175,445,222
JBrowse link
G Sycp2 synaptonemal complex protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:173,884,559...173,948,304
Ensembl chr 3:173,884,287...173,947,018
JBrowse link
G Sycp2l synaptonemal complex protein 2-like ISO (MGI:MGI:5692009|PMID:26362258)
(PMID:26362258)
RGD PMID:26362258 MGI:MGI:5692009 NCBI chr17:21,430,470...21,486,091 JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO (MGI:MGI:5504589|PMID:22854038) RGD PMID:22854038 MGI:MGI:5504589 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
condensed chromosome inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpa centromere protein A ISO (MGI:MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:MGI:2682084 NCBI chr 6:27,072,259...27,080,863
Ensembl chr 6:27,072,166...27,080,856
JBrowse link
G Orc2 origin recognition complex, subunit 2 ISO (MGI:MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:MGI:2682084 NCBI chr 9:65,350,630...65,387,293
Ensembl chr 9:65,350,627...65,387,169
JBrowse link
condensed chromosome kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahctf1 AT hook containing transcription factor 1 colocalizes_with ISO (PMID:17098863) RGD PMID:17098863 NCBI chr13:98,023,528...98,079,138
Ensembl chr13:98,023,430...98,078,946
JBrowse link
G Anapc16 anaphase promoting complex subunit 16 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr20:29,544,626...29,558,928
Ensembl chr20:29,544,629...29,558,321
JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 ISO
ISS
(PMID:15665297)
GO_REF:0000024
RGD
UniProt
PMID:15665297 GO_REF:0000024 NCBI chr10:106,856,097...106,864,419
Ensembl chr10:106,856,097...106,864,413
JBrowse link
G Bod1 biorientation of chromosomes in cell division 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:16,259,728...16,266,069
Ensembl chr10:16,259,728...16,266,061
JBrowse link
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase ISO (PMID:19465021) RGD PMID:19465021 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ISO (PMID:19465021) RGD PMID:19465021 NCBI chr 3:110,367,949...110,420,471
Ensembl chr 3:110,367,939...110,420,458
JBrowse link
G Cenph centromere protein H IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:30,766,637...30,780,123
Ensembl chr 2:30,766,590...30,780,121
JBrowse link
G Cenpn centromere protein N IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:49,457,461...49,479,989
Ensembl chr19:49,340,184...49,479,996
JBrowse link
G Cenpu centromere protein U IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:48,898,032...48,921,248
Ensembl chr16:48,897,982...48,921,242
JBrowse link
G Cenpw centromere protein W IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:29,915,443...29,920,598
Ensembl chr 1:29,915,443...29,920,598
JBrowse link
G Cfdp1 craniofacial development protein 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:43,989,596...44,078,320
Ensembl chr19:43,971,474...44,078,336
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 ISO
IBA
(PMID:21063390)
PMID:21873635
RGD PMID:21063390, PMID:21873635 RGD:13792537 NCBI chr16:80,839,373...80,850,340
Ensembl chr16:80,839,374...80,850,340
JBrowse link
G Ckap5 cytoskeleton associated protein 5 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:80,424,320...80,526,583
Ensembl chr 3:80,468,154...80,526,593
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:34,365,038...34,584,651
Ensembl chr13:34,365,147...34,584,651
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:122,003,719...122,185,495
Ensembl chr 8:122,003,916...122,185,495
JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:56,887,722...56,910,610
Ensembl chr18:56,887,354...56,918,345
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex ISO (PMID:15371340) RGD PMID:15371340 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:30,807,755...31,121,097
Ensembl chr 4:30,807,879...31,121,090
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:122,743,274...122,776,801
Ensembl chr 8:122,743,189...122,776,806
JBrowse link
G Hjurp Holliday junction recognition protein ISO (PMID:19410545) RGD PMID:19410545 NCBI chr 9:95,347,739...95,362,228
Ensembl chr 9:95,349,086...95,362,014
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Incenp inner centromere protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:225,923,448...225,953,384
Ensembl chr 1:225,925,773...225,952,516
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:118,476,410...118,541,928
Ensembl chr 5:118,476,430...118,673,780
JBrowse link
G Kif2b kinesin family member 2B IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:79,095,588...79,097,807
Ensembl chr10:79,095,593...79,097,807
JBrowse link
G Kif2c kinesin family member 2C IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:136,027,923...136,053,268
Ensembl chr 5:136,027,934...136,053,210
JBrowse link
G Knl1 kinetochore scaffold 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:110,847,304...110,909,807
Ensembl chr 3:110,855,000...110,909,807
JBrowse link
G Knstrn kinetochore-localized astrin/SPAG5 binding protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:110,618,256...110,638,024
Ensembl chr 3:110,618,298...110,638,046
JBrowse link
G LOC100911204 protein CASC5-like ISO
IBA
(PMID:15371340)
PMID:21873635
RGD PMID:15371340, PMID:21873635 RGD:13792537 NCBI chr 3:112,531,429...112,560,698
Ensembl chr 3:112,531,703...112,560,634
JBrowse link
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:23,574,234...23,587,262
Ensembl chr12:23,574,187...23,587,276
JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:143,081,298...143,103,225
Ensembl chr 5:143,081,326...143,103,222
JBrowse link
G Meikin meiotic kinetochore factor ISO
IBA
(MGI:MGI:5609844|PMID:25533956)
PMID:21873635
RGD PMID:25533956, PMID:21873635 MGI:MGI:5609844, RGD:13792537 NCBI chr10:39,726,373...39,776,458
Ensembl chr10:39,726,507...39,751,398
JBrowse link
G Mis12 MIS12 kinetochore complex component ISO (PMID:15371340) RGD PMID:15371340 NCBI chr10:57,653,685...57,661,833
Ensembl chr10:57,660,067...57,660,687
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 ISO (MGI:MGI:5317363|PMID:21795393) RGD PMID:21795393 MGI:MGI:5317363 NCBI chr 8:28,075,629...28,145,024
Ensembl chr 8:28,075,551...28,144,741
JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO (PMID:14699129) RGD PMID:14699129 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Nde1 nudE neurodevelopment protein 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:860,513...904,624
Ensembl chr10:860,521...896,938
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:55,398,919...55,456,654
Ensembl chr10:55,411,901...55,444,861
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex ISO (PMID:15371340) RGD PMID:15371340 NCBI chr13:109,669,646...109,697,849
Ensembl chr13:109,669,680...109,696,918
JBrowse link
G Nudcd2 NudC domain containing 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:25,890,943...25,896,432
Ensembl chr10:25,890,943...25,896,432
JBrowse link
G Nup107 nucleoporin 107 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:60,781,724...60,825,225
Ensembl chr 7:60,781,729...60,825,242
JBrowse link
G Nup133 nucleoporin 133 colocalizes_with ISO
IBA
(PMID:17098863)
PMID:21873635
RGD PMID:17098863, PMID:21873635 RGD:13792537 NCBI chr19:56,681,965...56,731,404
Ensembl chr19:56,681,979...56,731,372
JBrowse link
G Nup85 nucleoporin 85 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:104,118,999...104,137,258
Ensembl chr10:104,118,945...104,137,319
JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:47,211,682...47,270,343
Ensembl chr15:47,211,583...47,270,317
JBrowse link
G Pmf1 polyamine-modulated factor 1 ISO (PMID:15371340) RGD PMID:15371340 NCBI chr 2:187,751,770...187,771,933
Ensembl chr 2:187,751,776...187,771,865
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:39,864,302...39,882,030
Ensembl chr12:39,864,295...39,882,030
JBrowse link
G Rassf2 Ras association domain family member 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:124,574,088...124,610,267
Ensembl chr 3:124,575,621...124,610,267
JBrowse link
G Septin7 septin 7 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:26,412,910...26,476,615
Ensembl chr 8:26,413,233...26,476,611
JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:22,780,639...22,785,908
Ensembl chr 8:22,780,725...22,785,671
JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex ISO
IBA
ISS
(PMID:14699129)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:14699129, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:55,438,534...55,451,961
Ensembl chr 3:55,438,536...55,451,798
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:175,426,754...175,445,222
Ensembl chr 3:175,426,752...175,445,222
JBrowse link
G Tex14 testis expressed 14, intercellular bridge forming factor IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:74,724,070...74,849,172
Ensembl chr10:74,724,549...74,849,194
JBrowse link
G Zw10 zw10 kinetochore protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:53,365,881...53,390,742
Ensembl chr 8:53,365,857...53,390,930
JBrowse link
G Zwilch zwilch kinetochore protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:69,089,449...69,121,420
Ensembl chr 8:69,091,955...69,121,192
JBrowse link
G Zwint ZW10 interacting kinetochore protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr20:17,075,781...17,091,715
Ensembl chr20:17,075,771...17,091,766
JBrowse link
condensed chromosome outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bod1 biorientation of chromosomes in cell division 1 ISO
IBA
(PMID:17938248)
PMID:21873635
RGD PMID:17938248, PMID:21873635 RGD:13792537 NCBI chr10:16,259,728...16,266,069
Ensembl chr10:16,259,728...16,266,061
JBrowse link
G Bod1l1 biorientation of chromosomes in cell division 1-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:73,738,137...73,792,935
Ensembl chr14:73,738,137...73,791,656
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ISO (PMID:19468067)
(MGI:MGI:2682084|PMID:14519686), (MGI:MGI:3839184|PMID:19283064)
RGD PMID:14519686, PMID:19283064, PMID:19468067 MGI:MGI:2682084, MGI:MGI:3839184 NCBI chr 3:110,367,949...110,420,471
Ensembl chr 3:110,367,939...110,420,458
JBrowse link
G Cenpe centromere protein E ISO (MGI:MGI:3839184|PMID:19283064) RGD PMID:19283064 MGI:MGI:3839184 NCBI chr 2:240,395,974...240,454,785
Ensembl chr 2:240,396,152...240,454,747
JBrowse link
G Cenpf centromere protein F ISO (PMID:7542657), (PMID:7642639), (PMID:7904902) RGD PMID:7542657, PMID:7642639, PMID:7904902 NCBI chr13:108,132,499...108,178,609
Ensembl chr13:108,132,499...108,178,609
JBrowse link
G Crebbp CREB binding protein ISO (MGI:MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:MGI:2682084 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Nup133 nucleoporin 133 colocalizes_with ISO (PMID:17363900) RGD PMID:17363900 NCBI chr19:56,681,965...56,731,404
Ensembl chr19:56,681,979...56,731,372
JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:17093495), (PMID:19289083)
UniProt
RGD
PMID:17093495, PMID:19289083, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr18:70,174,316...70,184,368
Ensembl chr18:70,173,944...70,184,337
JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:17093495), (PMID:19289083)
UniProt
RGD
PMID:17093495, PMID:19289083, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:74,413,989...74,431,922
Ensembl chr10:74,413,989...74,431,922
JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 ISO
IBA
ISS
(PMID:19289083)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19289083, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:38,077,903...38,097,100
Ensembl chr15:38,077,909...38,096,875
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 ISO
IBA
ISS
(PMID:19468067)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19468067, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:19,628,070...19,652,914
Ensembl chr10:19,628,258...19,652,898
JBrowse link
condensed nuclear chromosome inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpk centromere protein K IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:34,312,766...34,373,945
Ensembl chr 2:34,312,766...34,335,776
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
condensed nuclear chromosome kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ISO
IBA
(MGI:MGI:3806388|PMID:18765791)
PMID:21873635
RGD PMID:18765791, PMID:21873635 MGI:MGI:3806388, RGD:13792537 NCBI chr 3:110,367,949...110,420,471
Ensembl chr 3:110,367,939...110,420,458
JBrowse link
G Cenpa centromere protein A ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 6:27,072,259...27,080,863
Ensembl chr 6:27,072,166...27,080,856
JBrowse link
G Cenpc centromere protein C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:23,611,909...23,670,314
Ensembl chr14:23,611,735...23,670,475
JBrowse link
G Cenpe centromere protein E ISO (MGI:MGI:3806388|PMID:18765791) RGD PMID:18765791 MGI:MGI:3806388 NCBI chr 2:240,395,974...240,454,785
Ensembl chr 2:240,396,152...240,454,747
JBrowse link
G Cenpo centromere protein O IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:28,648,804...28,663,527
Ensembl chr 6:28,649,638...28,663,233
JBrowse link
G Cenpt centromere protein T IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,813,284...37,819,782
Ensembl chr19:37,812,751...37,819,789
JBrowse link
G Mis18bp1 MIS18 binding protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:86,879,106...86,925,209
Ensembl chr 6:86,879,719...86,924,146
JBrowse link
G Ndc80 NDC80 kinetochore complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:87,818,456...87,847,223
Ensembl chr13:87,818,391...87,847,263
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 ISO (MGI:MGI:6378311|PMID:28410192) RGD PMID:28410192 MGI:MGI:6378311 NCBI chr14:106,008,086...106,062,566
Ensembl chr14:106,008,086...106,061,641
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:MGI:3806388|PMID:18765791) RGD PMID:18765791 MGI:MGI:3806388 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
condensed nuclear chromosome outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase ISO (PMID:24055156) RGD PMID:24055156 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Ccnb1 cyclin B1 ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Plk1 polo-like kinase 1 ISO
IEA
(PMID:18195732)
GO_REF:0000107
RGD
Ensembl
PMID:18195732 GO_REF:0000107 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
MIS12/MIND type complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsn1 DSN1 component of MIS12 kinetochore complex ISO (PMID:16585270) RGD PMID:16585270 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
G Mis12 MIS12 kinetochore complex component ISO
IEA
(PMID:16585270)
GO_REF:0000107
RGD
Ensembl
PMID:16585270 GO_REF:0000107 NCBI chr10:57,653,685...57,661,833
Ensembl chr10:57,660,067...57,660,687
JBrowse link
G Nsl1 NSL1 component of MIS12 kinetochore complex ISO
IBA
(PMID:16585270)
PMID:21873635
RGD PMID:16585270, PMID:21873635 RGD:13792537 NCBI chr13:109,669,646...109,697,849
Ensembl chr13:109,669,680...109,696,918
JBrowse link
G Pmf1 polyamine-modulated factor 1 ISO (PMID:16585270) RGD PMID:16585270 NCBI chr 2:187,751,770...187,771,933
Ensembl chr 2:187,751,776...187,771,865
JBrowse link
Mis6-Sim4 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpo centromere protein O IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:28,648,804...28,663,527
Ensembl chr 6:28,649,638...28,663,233
JBrowse link
nuclear MIS12/MIND complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsn1 DSN1 component of MIS12 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
G Mis12 MIS12 kinetochore complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,653,685...57,661,833
Ensembl chr10:57,660,067...57,660,687
JBrowse link
G Pmf1 polyamine-modulated factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:187,751,770...187,771,933
Ensembl chr 2:187,751,776...187,771,865
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      chromosomal region 291
        chromosome, centromeric region 190
          condensed chromosome, centromeric region 92
            condensed chromosome kinetochore + 73
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      organelle 13271
        non-membrane-bounded organelle 5195
          intracellular non-membrane-bounded organelle 5178
            chromosome 1423
              chromosomal region 291
                chromosome, centromeric region 190
                  condensed chromosome, centromeric region 92
                    condensed chromosome kinetochore + 73
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.