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Gene: Rcc1 (regulator of chromosome condensation 1) Rattus norvegicus

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Symbol:

Rcc1

Name:

regulator of chromosome condensation 1

RGD ID:

1592835

Description:

Predicted to enable several functions, including guanyl-nucleotide exchange factor activity; nucleosomal DNA binding activity; and protein heterodimerization activity. Predicted to be involved in G1/S transition of mitotic cell cycle; regulation of cell cycle process; and spindle organization. Predicted to be located in chromatin; condensed nuclear chromosome; and nucleoplasm. Predicted to be part of protein-containing complex. Predicted to be active in cytoplasm. Orthologous to human RCC1 (regulator of chromosome condensation 1); INTERACTS WITH amphetamine; Brodifacoum; thioacetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC682908; MGC187541; regulator of chromosome condensation; similar to chromosome condensation 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RCC1 (regulator of chromosome condensation 1)	RGD	RGD
Mus musculus (house mouse):	Rcc1 (regulator of chromosome condensation 1)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Rcc1 (regulator of chromosome condensation 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RCC1 (regulator of chromosome condensation 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RCC1 (regulator of chromosome condensation 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rcc1 (regulator of chromosome condensation 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RCC1 (regulator of chromosome condensation 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RCC1 (regulator of chromosome condensation 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rcc1 (regulator of chromosome condensation 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	KLK3 (kallikrein related peptidase 3)	HGNC	OMA
Homo sapiens (human):	KLK2 (kallikrein related peptidase 2)	HGNC	OMA
Homo sapiens (human):	KLK1 (kallikrein 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	RCC1 (regulator of chromosome condensation 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rcc1 (regulator of chromosome condensation 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rcc1 (regulator of chromosome condensation 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ran-3	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rcc1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	SRM1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rcc1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	149,810,037 - 149,828,475 (-)	NCBI		GRCr8
mRatBN7.2	5	144,526,025 - 144,544,445 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	144,526,025 - 144,544,577 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	147,226,563 - 147,244,220 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	148,996,458 - 149,014,116 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	148,984,701 - 149,002,345 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	150,508,840 - 150,531,062 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	150,509,040 - 150,525,254 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	154,176,026 - 154,193,188 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	5	142,957,255 - 142,974,902 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1-chloro-2,4-dinitrobenzene (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-amino-14,16-dimethyloctadecan-3-ol (ISO)

2-methylcholine (ISO)

4-(ethoxymethylene)-2-phenyloxazol-5-one (ISO)

5-fluorouracil (ISO)

acrolein (ISO)

actinomycin D (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

AM-251 (ISO)

amphetamine (EXP)

Aroclor 1254 (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

bisphenol A (ISO)

bisphenol AF (ISO)

Brodifacoum (EXP)

carbon nanotube (ISO)

CGP 52608 (ISO)

choline (ISO)

clofibrate (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

deoxynivalenol (ISO)

doxorubicin (ISO)

enzyme inhibitor (ISO)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

hexadecanoic acid (ISO)

hydrogen peroxide (ISO)

ivermectin (ISO)

L-methionine (ISO)

lead(0) (ISO)

methapyrilene (ISO)

methyl methanesulfonate (ISO)

N-methyl-4-phenylpyridinium (ISO)

nickel atom (ISO)

Nutlin-3 (ISO)

ozone (ISO)

paracetamol (ISO)

perfluorooctanoic acid (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

progesterone (ISO)

rotenone (ISO)

sodium arsenite (ISO)

sodium fluoride (ISO)

tacrolimus hydrate (ISO)

tamibarotene (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

toluene 2,4-diisocyanate (ISO)

trichostatin A (ISO)

trimellitic anhydride (ISO)

triptonide (ISO)

tunicamycin (ISO)

valproic acid (ISO)

venlafaxine hydrochloride (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromosome segregation (IEA,ISO)

G1/S transition of mitotic cell cycle (IEA,ISO)

mitotic spindle organization (IEA,ISO)

regulation of mitotic cell cycle (IBA)

regulation of mitotic nuclear division (IEA,ISO)

regulation of mitotic spindle assembly (IBA)

spindle assembly (IEA,ISO)

Cellular Component

chromatin (IEA,ISO)

condensed nuclear chromosome (IEA,ISO)

cytoplasm (IBA,IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO)

protein-containing complex (IEA,ISO)

Molecular Function

chromatin binding (IEA,ISO)

guanyl-nucleotide exchange factor activity (IBA,IEA,ISO)

histone binding (IEA,ISO)

nucleosomal DNA binding (IEA,ISO)

nucleosome binding (IEA,ISO)

protein binding (ISO)

protein heterodimerization activity (IEA,ISO)

small GTPase binding (IEA,ISO)

sulfate binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:1944575	PMID:2677018	PMID:3678831	PMID:11336674	PMID:11375490	PMID:12121620	PMID:12477932	PMID:15014043	PMID:15632090	PMID:17435751	PMID:18347012	PMID:20347844
PMID:21630459

Genomics

Comparative Map Data

Rcc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	149,810,037 - 149,828,475 (-)	NCBI		GRCr8
mRatBN7.2	5	144,526,025 - 144,544,445 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	144,526,025 - 144,544,577 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	147,226,563 - 147,244,220 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	148,996,458 - 149,014,116 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	148,984,701 - 149,002,345 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	150,508,840 - 150,531,062 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	150,509,040 - 150,525,254 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	154,176,026 - 154,193,188 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	5	142,957,255 - 142,974,902 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

RCC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	28,506,043 - 28,538,989 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	28,505,943 - 28,539,300 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	28,832,555 - 28,865,501 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	28,717,332 - 28,738,194 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	28,653,183 - 28,686,118	NCBI
Celera	1	27,228,232 - 27,261,474 (+)	NCBI		Celera
Cytogenetic Map	1	p35.3	NCBI
HuRef	1	27,086,264 - 27,119,463 (+)	NCBI		HuRef
CHM1_1	1	28,947,946 - 28,981,201 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	28,347,999 - 28,380,949 (+)	NCBI		T2T-CHM13v2.0

Rcc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	132,059,230 - 132,073,061 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	132,059,230 - 132,080,916 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	132,331,919 - 132,345,750 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	132,331,919 - 132,353,605 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	131,887,838 - 131,901,577 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	131,603,999 - 131,617,738 (-)	NCBI		MGSCv36	mm8
Celera	4	130,492,831 - 130,506,571 (-)	NCBI		Celera
Cytogenetic Map	4	D2.3	NCBI
cM Map	4	65.2	NCBI

Rcc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	7,612,784 - 7,643,275 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	7,612,784 - 7,643,275 (+)	NCBI	ChiLan1.0	ChiLan1.0

RCC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	198,307,052 - 198,329,284 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	197,426,225 - 197,448,484 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	27,784,488 - 27,806,728 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	28,819,422 - 28,841,266 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	28,820,815 - 28,841,773 (+)	Ensembl	panpan1.1		panPan2

RCC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	71,948,159 - 71,972,902 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	71,948,165 - 71,964,353 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	68,524,663 - 68,540,842 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	72,507,102 - 72,531,854 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	72,507,108 - 72,530,338 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	69,335,321 - 69,351,510 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	70,343,443 - 70,359,626 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	71,341,326 - 71,357,632 (-)	NCBI		UU_Cfam_GSD_1.0

Rcc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	46,804,062 - 46,822,132 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	12,635,175 - 12,647,231 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	12,635,175 - 12,646,907 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RCC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	85,546,024 - 85,565,866 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	85,540,766 - 85,565,869 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	79,351,068 - 79,378,340 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RCC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	104,256,895 - 104,279,948 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	104,257,877 - 104,278,458 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	12,221,461 - 12,246,700 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rcc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	12,326,738 - 12,362,213 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	12,316,976 - 12,360,673 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rcc1
143 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	100
Count of miRNA genes:	81
Interacting mature miRNAs:	87
Transcripts:	ENSRNOT00000075127
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331796	Thshl2	Thyroid stimulating hormone level QTL 2	2.3		blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	5	97059760	147465714	Rat
10053720	Scort26	Serum corticosterone level QTL 26	2.06	0.0147	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	124965598	166875058	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	40128307	148607290	Rat
8552960	Pigfal15	Plasma insulin-like growth factor 1 level QTL 15			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	111416838	156416838	Rat
2302369	Scl60	Serum cholesterol level QTL 60	3.13		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	143608201	161165651	Rat
631562	Apr2	Acute phase response QTL 2	3.7		blood murinoglobulin 1 amount (VT:0010597)	plasma murinoglobulin 1 level (CMO:0001931)	5	135927956	166875058	Rat
61444	Strs2	Sensitivity to stroke QTL 2	4.7		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	5	135929696	166875058	Rat
1300119	Bp180	Blood pressure QTL 180	3.82		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	5	144358090	157869054	Rat
70156	Niddm30	Non-insulin dependent diabetes mellitus QTL 30	3.98		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	5	129132447	151006154	Rat
8552908	Pigfal4	Plasma insulin-like growth factor 1 level QTL 4	6.6		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	128506074	166875058	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	60293434	161481680	Rat
7794791	Mcs33	Mammary carcinoma susceptibility QTL 33	1.93		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	5	131345754	166875058	Rat
7207486	Bss109	Bone structure and strength QTL 109			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	5	106906205	151906205	Rat
7207481	Bss106	Bone structure and strength QTL 106	7.9		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	106906205	151906205	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	82394392	166664054	Rat
1598861	Cm64	Cardiac mass QTL 64	2.9		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	127798274	166875058	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	46711509	161317411	Rat
631263	Cm24	Cardiac mass QTL 24	3.5		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	143799107	158428037	Rat
631505	Bp103	Blood pressure QTL 103	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	132717196	165560427	Rat
1549838	Bss4	Bone structure and strength QTL 4	9.2		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	5	106906205	151906205	Rat
1641920	Colcs1	Colorectal carcinoma susceptibility QTL 1	2.99	0.0055	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	5	121846814	166846814	Rat
8694169	Bw148	Body weight QTL 148	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	128506074	166875058	Rat
1331721	Bp210	Blood pressure QTL 210	3.413		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	5	143069996	166846814	Rat
8657050	Bw146	Body weight QTL 146	19.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	108938288	153938288	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	2138965	166875058	Rat
2317056	Wbc3	White blood cell count QTL 3	2.51	0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	5	105999803	150999803	Rat
634349	Bp139	Blood pressure QTL 139		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	128924607	166875058	Rat
724525	Bp147	Blood pressure QTL 147	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	126424772	166875058	Rat
1598847	Cm62	Cardiac mass QTL 62	3.4		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	108845856	153845856	Rat
2293642	Bss37	Bone structure and strength QTL 37	4.64	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	120740824	151018848	Rat
1578673	Bmd13	Bone mineral density QTL 13	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	5	103689353	148689353	Rat
738018	Anxrr4	Anxiety related response QTL 4	5.1		exploratory behavior trait (VT:0010471)	percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)	5	130130159	166875058	Rat
2313096	Bmd78	Bone mineral density QTL 78	3.1	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	5	144377876	161317411	Rat
7207488	Bss110	Bone structure and strength QTL 1	8.4		femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	5	106906205	151906205	Rat
8694441	Bw169	Body weight QTL 169	17.61	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	5	111416838	156416838	Rat
7207491	Bss112	Bone structure and strength QTL 112	7		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	5	106906205	151906205	Rat
8694389	Bw160	Body weight QTL 160	6.17	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	5	111416838	156416838	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	69540295	151018848	Rat
8694198	Abfw3	Abdominal fat weight QTL 3	16.13	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	5	111416838	156416838	Rat
1298089	Scl14	Serum cholesterol level QTL 14	5.8	0.0004	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	108845856	153845856	Rat
1598819	Bp292	Blood pressure QTL 292	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	127798274	166875058	Rat
1358187	Emca1	Estrogen-induced mammary cancer QTL 1	4.4		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	5	99216724	148607142	Rat

Markers in Region

RH132830

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	144,526,155 - 144,526,336 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	150,508,973 - 150,509,153	NCBI	Rnor6.0
Rnor_5.0	5	154,176,159 - 154,176,339	UniSTS	Rnor5.0
Celera	5	142,956,637 - 142,956,817	UniSTS
RH 3.4 Map	5	965.1	UniSTS

AI326872

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	144,526,252 - 144,526,358 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	150,509,070 - 150,509,175	NCBI	Rnor6.0
Rnor_5.0	5	154,176,256 - 154,176,361	UniSTS	Rnor5.0
Celera	5	142,956,734 - 142,956,839	UniSTS

RH143933

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	144,538,467 - 144,538,574 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	150,521,282 - 150,521,388	NCBI	Rnor6.0
Rnor_5.0	5	154,188,468 - 154,188,574	UniSTS	Rnor5.0
Celera	5	142,968,948 - 142,969,054	UniSTS
RH 3.4 Map	5	965.8	UniSTS

BE099985

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	144,537,872 - 144,538,022 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	150,520,687 - 150,520,836	NCBI	Rnor6.0
Rnor_5.0	5	154,187,873 - 154,188,022	UniSTS	Rnor5.0
Celera	5	142,968,353 - 142,968,502	UniSTS
RH 3.4 Map	5	967.1	UniSTS

RH140896

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	97,893,233 - 97,893,448 (+)	MAPPER	mRatBN7.2
mRatBN7.2	5	144,544,716 - 144,544,931 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	101,613,444 - 101,613,658	NCBI	Rnor6.0
Rnor_6.0	5	150,525,551 - 150,525,765	NCBI	Rnor6.0
Rnor_5.0	5	154,193,455 - 154,193,669	UniSTS	Rnor5.0
Rnor_5.0	5	105,625,539 - 105,625,753	UniSTS	Rnor5.0
RGSC_v3.4	5	102,350,834 - 102,351,048	UniSTS	RGSC3.4
Celera	5	142,975,199 - 142,975,413	UniSTS
Celera	5	96,445,204 - 96,445,418	UniSTS
RH 3.4 Map	5	747.99	UniSTS

D15S1045

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	144,532,144 - 144,533,560 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	150,514,961 - 150,516,376	NCBI	Rnor6.0
Rnor_5.0	5	154,182,147 - 154,183,562	UniSTS	Rnor5.0
Celera	5	142,962,625 - 142,964,040	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001128189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239073	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239075	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006239077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110774	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC160834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000075127 ⟹ ENSRNOP00000066003

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	144,526,775 - 144,544,420 (-)	Ensembl
Rnor_6.0 Ensembl	5	150,509,592 - 150,525,254 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085482 ⟹ ENSRNOP00000074333

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	144,526,025 - 144,538,394 (-)	Ensembl
Rnor_6.0 Ensembl	5	150,509,040 - 150,520,884 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101321 ⟹ ENSRNOP00000081871

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	144,526,026 - 144,544,577 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108589 ⟹ ENSRNOP00000091055

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	144,526,026 - 144,533,858 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117781 ⟹ ENSRNOP00000079225

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	144,526,026 - 144,533,636 (-)	Ensembl

RefSeq Acc Id:

NM_001128189 ⟹ NP_001121661

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,786 - 149,828,431 (-)	NCBI
mRatBN7.2	5	144,526,774 - 144,544,420 (-)	NCBI
Rnor_6.0	5	150,509,591 - 150,525,254 (-)	NCBI
Rnor_5.0	5	154,176,026 - 154,193,188 (-)	NCBI
Celera	5	142,957,255 - 142,974,902 (-)	RGD

Sequence:

show sequence

CAATGATGGGGGCATTGAGGGGGCACCTCGAAGCCATGTGAGTGAATAAGATCTTGGAGAAAGA
CATTGGAGTTTCCAGGGTGAAGCTTGGAGAAACTTCACCGTCTACCATCCAGGAGAGGTCATGA
TGGAGGCAGAAGTAAACCTGAAAAGGACAGGAAGATGCCACCCAAGCGCATAGCTAAGAGAAGG
TCACCCCCAGAAGATGCTATCCCCAAAAGCAAGAAGGTGAAAGTCTCACACAGGTCCCACAACA
CAGAACCAGGCTTGGTGCTGACATTGGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAG
TGTGCTGGAGAGGAAGAAGCCGGCCTTGGTACCCCTTCTACAGGATGTTGTGCAGGCCGAGGCC
GGGGGCATGCACACTGTGTGTCTGAGCCAAAGTGGCCAGGTCTACTCCTTTGGCTGCAATGACG
AGGGTGCCCTGGGAAGGGACACCTCAGTCGAGGGCTCCGAGATGGTCCCCGGGAAAGTGGAACT
ACAAGAGAAAGTGGTGCAAGTGTCAGCGGGAGACAGTCACACAGCAGCTCTCACTGAAGACGGC
CGAGTCTTCCTCTGGGGCTCTTTCCGGGACAATAATGGTGTGATCGGGTTGTTGGAGCCCATGA
AGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGACACGCAGGTGGTAAAGGTAGCCTCGGGGAA
CGACCACTTGGTGATGCTCACAACTGATGGAGATCTCTACACCTTGGGCTGTGGGGAGCAAGGT
CAGCTGGGCCGTGTGCCTGAGTTATTTGCCAACCGAGGTGGCCGTCAGGGCCTTGAGCGACTCC
TAGTCCCCAGGTGTGTGCTGCTGAAGTCCCGGGGAACGCGGGGCCGCGTGCGGTTCCAGGATGC
CTTCTGTGGCGCCTATTTCACCTTCGCCATCTCCCGTGAGGGCCATGTGTATGGCTTTGGCCTC
TCCAACTATCACCAGCTCGGAACTCCAGGCACTGGGTCTTGCTTCATTCCTCAAAACTTGACAT
CCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGTGGCCAGCATCATACAGTCTGCAT
GGATTCAGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTACGGGCGGCTGGGCCTTGGGGAG
GGTGCTGAGGAGAAGAGCATACCCACCCTCATTTCCCGGCTACCGGTGGTCTCCTCAGTGGCCT
GTGGGGCTTCAGTGGGGTACGCTGTGTCCAAGGATGGTCGTGTTTTTGCCTGGGGCATGGGCAC
CAACTACCAACTGGGCACCGGGCAGGAGGACGATGCCTGGAGCCCGGTGGAGATGACTGGCAAA
CAGCTGGAGAACCGTGAGGTGTTAACGGTGTCCAGTGGGGGCCAGCACACAGTCTTACTAGTTA
AGGACAAGACCCAAAGCTGATGACATCTTTGTGGGCCTGGCTTCTGGCCCCAACCCAGCTTCAC
AGAACAGGAGCGGCCAGCTACAGATTCCAGAAGGCCCCTCCCCACCCCTGAGCAGAAATCATCT
CCTGTCTTTCCCATCACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006239073 ⟹ XP_006239135

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,822,497 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,538,517 (-)	NCBI
Rnor_6.0	5	150,508,840 - 150,521,285 (-)	NCBI
Rnor_5.0	5	154,176,026 - 154,193,188 (-)	NCBI

Sequence:

show sequence

GCCAGGGTCGCGGCCGGAGGCCTGTAGAGCGCATGCTCGGGGCAGTTCGCGGCCGGCCGCCGAG
CGCCGGAGTTGCTTGTGGCTGCCCTGCACCGAGGACAGGAAGATGCCACCCAAGCGCATAGCTA
AGAGAAGGTCACCCCCAGAAGATGCTATCCCCAAAAGCAAGAAGGTGAAAGACACTCGTAACCG
CCGTCCTGCTCCTCGCTCCTGCCAAGTCTCACACAGGTCCCACAACACAGAACCAGGCTTGGTG
CTGACATTGGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAGTGTGCTGGAGAGGAAGA
AGCCGGCCTTGGTACCCCTTCTACAGGATGTTGTGCAGGCCGAGGCCGGGGGCATGCACACTGT
GTGTCTGAGCCAAAGTGGCCAGGTCTACTCCTTTGGCTGCAATGACGAGGGTGCCCTGGGAAGG
GACACCTCAGTCGAGGGCTCCGAGATGGTCCCCGGGAAAGTGGAACTACAAGAGAAAGTGGTGC
AAGTGTCAGCGGGAGACAGTCACACAGCAGCTCTCACTGAAGACGGCCGAGTCTTCCTCTGGGG
CTCTTTCCGGGACAATAATGGTGTGATCGGGTTGTTGGAGCCCATGAAGAAGAGCATGGTGCCT
GTGCAGGTGCAGCTGGACACGCAGGTGGTAAAGGTAGCCTCGGGGAACGACCACTTGGTGATGC
TCACAACTGATGGAGATCTCTACACCTTGGGCTGTGGGGAGCAAGGTCAGCTGGGCCGTGTGCC
TGAGTTATTTGCCAACCGAGGTGGCCGTCAGGGCCTTGAGCGACTCCTAGTCCCCAGGTGTGTG
CTGCTGAAGTCCCGGGGAACGCGGGGCCGCGTGCGGTTCCAGGATGCCTTCTGTGGCGCCTATT
TCACCTTCGCCATCTCCCGTGAGGGCCATGTGTATGGCTTTGGCCTCTCCAACTATCACCAGCT
CGGAACTCCAGGCACTGGGTCTTGCTTCATTCCTCAAAACTTGACATCCTTCAAGAATTCCACC
AAGTCCTGGGTGGGCTTCTCTGGTGGCCAGCATCATACAGTCTGCATGGATTCAGAAGGAAAAG
CATACAGCCTGGGCCGGGCTGAGTACGGGCGGCTGGGCCTTGGGGAGGGTGCTGAGGAGAAGAG
CATACCCACCCTCATTTCCCGGCTACCGGTGGTCTCCTCAGTGGCCTGTGGGGCTTCAGTGGGG
TACGCTGTGTCCAAGGATGGTCGTGTTTTTGCCTGGGGCATGGGCACCAACTACCAACTGGGCA
CCGGGCAGGAGGACGATGCCTGGAGCCCGGTGGAGATGACTGGCAAACAGCTGGAGAACCGTGA
GGTGTTAACGGTGTCCAGTGGGGGCCAGCACACAGTCTTACTAGTTAAGGACAAGACCCAAAGC
TGATGACATCTTTGTGGGCCTGGCTTCTGGCCCCAACCCAGCTTCACAGAACAGGAGCGGCCAG
CTACAGATTCCAGAAGGCCCCTCCCCACCCCTGAGCAGAAATCATCTCCTGTCTTTCCCATCAC
CACAGCAGAATCCTTTTTCCTTCTGTTTTGTCCTCTTTCTAGAATCATCCTGGTACTTGTGGGA
TACGGGGGGGATGGGAGGAGGATCAGAAGATCTTAGCTTACCAGAGGCTTACTTTGTTAGACCT
TTCTTCCCTTCGATACCCTGCCTCCTGTGGTCCTAGCTGGCACTGGCTCCTGCCCTGGGGTTTT
GGTGCCCACACTGAAAAGTTGGGACTCCATGAAGCCCTGCTTCCCATGAGCCATTCTTTCTGTT
CCTAACAGTTTACGAGGAGACAGATGGTTTGTATAGTCATCAGATCCAGTTGTCATGGACCCAT
GCCTGGAGAGCTGGACAAAGGCTTTCTGTGTGACCTAAGCCAAATACTTGGCTCTAAACAGGTG
TCCATGGGCAAAAACAGTGACCCACTTGAAGAAAACCAACTGTCCTCCCAAAAGCACAAAGCAC
CCAGTGTCCCTTGGGTGTCACCTGTCCGTTCCCCATCAGTCAGCCTTTCTGCCATAGAGGACTA
GATAGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAGGGTATTGGGGAAGGGGTAGGGGTGGAG
GGTTCTAATGGTGCTGAGGGAGGAGTGAAGGGAAAGGTGTGGAGGGGCAGAGGCTGGTCCTAAG
AAAAGTATAACAGTGGCTGAGAAAATAGTTTTGATTTTTTTTAATTGTATGATATTTTGGAGGG
GAGAGTAAAATCTTGTAACACTTTGAATAAATTTAGAGTTTTATAAAGA

hide sequence

RefSeq Acc Id:

XM_006239074 ⟹ XP_006239136

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,817,539 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,533,587 (-)	NCBI
Rnor_6.0	5	150,508,840 - 150,516,734 (-)	NCBI
Rnor_5.0	5	154,176,026 - 154,193,188 (-)	NCBI

Sequence:

show sequence

TTTTTTTTTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCACTTGCTAGGCAAGCGCTC
TACCACTGAGCTAAATCCCCAACCTAGAAGCATCATTTTTGATGGCTTCATATAGTTCTTTCAC
AGATATTCCCGTGTGGCCAGTTCACTAGTATTGACCTCTCCCCAAGTGCACCTTCCTAGTGCTG
AGATCTCGGGAATCTGCCGCCAGGCTCTGTGGAGTGCTGGAAAGAGTTGGACTTGGCTCAGGGC
AGATTCTCGCCAGGCTGAGCTACATCCCAGCCCTTAGTCTACAACTGTTAAGCTCATTCTCCAC
ACAGTGTAGCAGCCGAATAGTTGTGAGCTTGGTCATTCCTCACCTGTCACATGGCTCTGGGATA
GATGTCGCGAGCTGTGGCTGCTGGGACAGGAAGATGCCACCCAAGCGCATAGCTAAGAGAAGGT
CACCCCCAGAAGATGCTATCCCCAAAAGCAAGAAGGTGAAAGACACTCGTAACCGCCGTCCTGC
TCCTCGCTCCTGCCAAGTCTCACACAGGTCCCACAACACAGAACCAGGCTTGGTGCTGACATTG
GGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAGTGTGCTGGAGAGGAAGAAGCCGGCCT
TGGTACCCCTTCTACAGGATGTTGTGCAGGCCGAGGCCGGGGGCATGCACACTGTGTGTCTGAG
CCAAAGTGGCCAGGTCTACTCCTTTGGCTGCAATGACGAGGGTGCCCTGGGAAGGGACACCTCA
GTCGAGGGCTCCGAGATGGTCCCCGGGAAAGTGGAACTACAAGAGAAAGTGGTGCAAGTGTCAG
CGGGAGACAGTCACACAGCAGCTCTCACTGAAGACGGCCGAGTCTTCCTCTGGGGCTCTTTCCG
GGACAATAATGGTGTGATCGGGTTGTTGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTG
CAGCTGGACACGCAGGTGGTAAAGGTAGCCTCGGGGAACGACCACTTGGTGATGCTCACAACTG
ATGGAGATCTCTACACCTTGGGCTGTGGGGAGCAAGGTCAGCTGGGCCGTGTGCCTGAGTTATT
TGCCAACCGAGGTGGCCGTCAGGGCCTTGAGCGACTCCTAGTCCCCAGGTGTGTGCTGCTGAAG
TCCCGGGGAACGCGGGGCCGCGTGCGGTTCCAGGATGCCTTCTGTGGCGCCTATTTCACCTTCG
CCATCTCCCGTGAGGGCCATGTGTATGGCTTTGGCCTCTCCAACTATCACCAGCTCGGAACTCC
AGGCACTGGGTCTTGCTTCATTCCTCAAAACTTGACATCCTTCAAGAATTCCACCAAGTCCTGG
GTGGGCTTCTCTGGTGGCCAGCATCATACAGTCTGCATGGATTCAGAAGGAAAAGCATACAGCC
TGGGCCGGGCTGAGTACGGGCGGCTGGGCCTTGGGGAGGGTGCTGAGGAGAAGAGCATACCCAC
CCTCATTTCCCGGCTACCGGTGGTCTCCTCAGTGGCCTGTGGGGCTTCAGTGGGGTACGCTGTG
TCCAAGGATGGTCGTGTTTTTGCCTGGGGCATGGGCACCAACTACCAACTGGGCACCGGGCAGG
AGGACGATGCCTGGAGCCCGGTGGAGATGACTGGCAAACAGCTGGAGAACCGTGAGGTGTTAAC
GGTGTCCAGTGGGGGCCAGCACACAGTCTTACTAGTTAAGGACAAGACCCAAAGCTGATGACAT
CTTTGTGGGCCTGGCTTCTGGCCCCAACCCAGCTTCACAGAACAGGAGCGGCCAGCTACAGATT
CCAGAAGGCCCCTCCCCACCCCTGAGCAGAAATCATCTCCTGTCTTTCCCATCACCACAGCAGA
ATCCTTTTTCCTTCTGTTTTGTCCTCTTTCTAGAATCATCCTGGTACTTGTGGGATACGGGGGG
GATGGGAGGAGGATCAGAAGATCTTAGCTTACCAGAGGCTTACTTTGTTAGACCTTTCTTCCCT
TCGATACCCTGCCTCCTGTGGTCCTAGCTGGCACTGGCTCCTGCCCTGGGGTTTTGGTGCCCAC
ACTGAAAAGTTGGGACTCCATGAAGCCCTGCTTCCCATGAGCCATTCTTTCTGTTCCTAACAGT
TTACGAGGAGACAGATGGTTTGTATAGTCATCAGATCCAGTTGTCATGGACCCATGCCTGGAGA
GCTGGACAAAGGCTTTCTGTGTGACCTAAGCCAAATACTTGGCTCTAAACAGGTGTCCATGGGC
AAAAACAGTGACCCACTTGAAGAAAACCAACTGTCCTCCCAAAAGCACAAAGCACCCAGTGTCC
CTTGGGTGTCACCTGTCCGTTCCCCATCAGTCAGCCTTTCTGCCATAGAGGACTAGATAGCCAT
GCTGGGCTCGGCTGGGCAGTCAAGGCAGGGTATTGGGGAAGGGGTAGGGGTGGAGGGTTCTAAT
GGTGCTGAGGGAGGAGTGAAGGGAAAGGTGTGGAGGGGCAGAGGCTGGTCCTAAGAAAAGTATA
ACAGTGGCTGAGAAAATAGTTTTGATTTTTTTTAATTGTATGATATTTTGGAGGGGAGAGTAAA
ATCTTGTAACACTTTGAATAAATTTAGAGTTTTATAAAGA

hide sequence

RefSeq Acc Id:

XM_006239075 ⟹ XP_006239137

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,822,305 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,538,285 (-)	NCBI
Rnor_6.0	5	150,508,840 - 150,521,004 (-)	NCBI
Rnor_5.0	5	154,176,026 - 154,193,188 (-)	NCBI

Sequence:

show sequence

GCTCCGGGCGCGCGCTCCGCTACGCGGCGGGAGATTCAAACGGCTGGTGCGCGGGGGCCGGGCG
CGCGCGGCCGCGGTGAGCTCGGGGAGCCGCCGGTGGGGAGGGAGCGGCAGCGTTCGCAGACCAT
CGCCTGCCCTTAACCCCCATCAACCCGGTGTCACCCGGTCGTTGGCTGCCTGATGTTTCCGTGC
CTCTGGGGAACAATGGTGACAAAGGCGGGCCTCCGTGCCCTTTGCGGGGCGCAGGGGCTCCCTG
GCGAGACTTCCATGGGTCCACAGTTAGGGTCTTCTGAGATCAGCAAAGTATGTCCGTGGAACTT
GGGCGTCGCTGCTGCCAAGTCTTTGGTTCTTCAGAAATTAAGTCCTCCGACCACGTGTGCCGAG
GCACAAGCTGAGGGTATGAAACAGACCGGGAACTCCGAAGCGGAAGCCGGAACCGGGCTGTGGA
GGGTTGGGGATAGCGTTCCAGGACAGGAAGATGCCACCCAAGCGCATAGCTAAGAGAAGGTCAC
CCCCAGAAGATGCTATCCCCAAAAGCAAGAAGGTGAAAGACACTCGTAACCGCCGTCCTGCTCC
TCGCTCCTGCCAAGTCTCACACAGGTCCCACAACACAGAACCAGGCTTGGTGCTGACATTGGGC
CAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAGTGTGCTGGAGAGGAAGAAGCCGGCCTTGG
TACCCCTTCTACAGGATGTTGTGCAGGCCGAGGCCGGGGGCATGCACACTGTGTGTCTGAGCCA
AAGTGGCCAGGTCTACTCCTTTGGCTGCAATGACGAGGGTGCCCTGGGAAGGGACACCTCAGTC
GAGGGCTCCGAGATGGTCCCCGGGAAAGTGGAACTACAAGAGAAAGTGGTGCAAGTGTCAGCGG
GAGACAGTCACACAGCAGCTCTCACTGAAGACGGCCGAGTCTTCCTCTGGGGCTCTTTCCGGGA
CAATAATGGTGTGATCGGGTTGTTGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTGCAG
CTGGACACGCAGGTGGTAAAGGTAGCCTCGGGGAACGACCACTTGGTGATGCTCACAACTGATG
GAGATCTCTACACCTTGGGCTGTGGGGAGCAAGGTCAGCTGGGCCGTGTGCCTGAGTTATTTGC
CAACCGAGGTGGCCGTCAGGGCCTTGAGCGACTCCTAGTCCCCAGGTGTGTGCTGCTGAAGTCC
CGGGGAACGCGGGGCCGCGTGCGGTTCCAGGATGCCTTCTGTGGCGCCTATTTCACCTTCGCCA
TCTCCCGTGAGGGCCATGTGTATGGCTTTGGCCTCTCCAACTATCACCAGCTCGGAACTCCAGG
CACTGGGTCTTGCTTCATTCCTCAAAACTTGACATCCTTCAAGAATTCCACCAAGTCCTGGGTG
GGCTTCTCTGGTGGCCAGCATCATACAGTCTGCATGGATTCAGAAGGAAAAGCATACAGCCTGG
GCCGGGCTGAGTACGGGCGGCTGGGCCTTGGGGAGGGTGCTGAGGAGAAGAGCATACCCACCCT
CATTTCCCGGCTACCGGTGGTCTCCTCAGTGGCCTGTGGGGCTTCAGTGGGGTACGCTGTGTCC
AAGGATGGTCGTGTTTTTGCCTGGGGCATGGGCACCAACTACCAACTGGGCACCGGGCAGGAGG
ACGATGCCTGGAGCCCGGTGGAGATGACTGGCAAACAGCTGGAGAACCGTGAGGTGTTAACGGT
GTCCAGTGGGGGCCAGCACACAGTCTTACTAGTTAAGGACAAGACCCAAAGCTGATGACATCTT
TGTGGGCCTGGCTTCTGGCCCCAACCCAGCTTCACAGAACAGGAGCGGCCAGCTACAGATTCCA
GAAGGCCCCTCCCCACCCCTGAGCAGAAATCATCTCCTGTCTTTCCCATCACCACAGCAGAATC
CTTTTTCCTTCTGTTTTGTCCTCTTTCTAGAATCATCCTGGTACTTGTGGGATACGGGGGGGAT
GGGAGGAGGATCAGAAGATCTTAGCTTACCAGAGGCTTACTTTGTTAGACCTTTCTTCCCTTCG
ATACCCTGCCTCCTGTGGTCCTAGCTGGCACTGGCTCCTGCCCTGGGGTTTTGGTGCCCACACT
GAAAAGTTGGGACTCCATGAAGCCCTGCTTCCCATGAGCCATTCTTTCTGTTCCTAACAGTTTA
CGAGGAGACAGATGGTTTGTATAGTCATCAGATCCAGTTGTCATGGACCCATGCCTGGAGAGCT
GGACAAAGGCTTTCTGTGTGACCTAAGCCAAATACTTGGCTCTAAACAGGTGTCCATGGGCAAA
AACAGTGACCCACTTGAAGAAAACCAACTGTCCTCCCAAAAGCACAAAGCACCCAGTGTCCCTT
GGGTGTCACCTGTCCGTTCCCCATCAGTCAGCCTTTCTGCCATAGAGGACTAGATAGCCATGCT
GGGCTCGGCTGGGCAGTCAAGGCAGGGTATTGGGGAAGGGGTAGGGGTGGAGGGTTCTAATGGT
GCTGAGGGAGGAGTGAAGGGAAAGGTGTGGAGGGGCAGAGGCTGGTCCTAAGAAAAGTATAACA
GTGGCTGAGAAAATAGTTTTGATTTTTTTTAATTGTATGATATTTTGGAGGGGAGAGTAAAATC
TTGTAACACTTTGAATAAATTTAGAGTTTTATAAAGA

hide sequence

RefSeq Acc Id:

XM_006239077 ⟹ XP_006239139

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,822,495 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,538,516 (-)	NCBI
Rnor_6.0	5	150,508,840 - 150,521,285 (-)	NCBI
Rnor_5.0	5	154,176,026 - 154,193,188 (-)	NCBI

Sequence:

show sequence

GCCAGGGTCGCGGCCGGAGGCCTGTAGAGCGCATGCTCGGGGCAGTTCGCGGCCGGCCGCCGAG
CGCCGGAGTTGCTTGTGGCTGCCCTGCACCGAGGACAGGAAGATGCCACCCAAGCGCATAGCTA
AGAGAAGGTCACCCCCAGAAGATGCTATCCCCAAAAGCAAGAAGGTGAAAGTCTCACACAGGTC
CCACAACACAGAACCAGGCTTGGTGCTGACATTGGGCCAGGGCGACGTGGGCCAGCTGGGGCTG
GGTGAGAGTGTGCTGGAGAGGAAGAAGCCGGCCTTGGTACCCCTTCTACAGGATGTTGTGCAGG
CCGAGGCCGGGGGCATGCACACTGTGTGTCTGAGCCAAAGTGGCCAGGTCTACTCCTTTGGCTG
CAATGACGAGGGTGCCCTGGGAAGGGACACCTCAGTCGAGGGCTCCGAGATGGTCCCCGGGAAA
GTGGAACTACAAGAGAAAGTGGTGCAAGTGTCAGCGGGAGACAGTCACACAGCAGCTCTCACTG
AAGACGGCCGAGTCTTCCTCTGGGGCTCTTTCCGGGACAATAATGGTGTGATCGGGTTGTTGGA
GCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGACACGCAGGTGGTAAAGGTAGCC
TCGGGGAACGACCACTTGGTGATGCTCACAACTGATGGAGATCTCTACACCTTGGGCTGTGGGG
AGCAAGGTCAGCTGGGCCGTGTGCCTGAGTTATTTGCCAACCGAGGTGGCCGTCAGGGCCTTGA
GCGACTCCTAGTCCCCAGGTGTGTGCTGCTGAAGTCCCGGGGAACGCGGGGCCGCGTGCGGTTC
CAGGATGCCTTCTGTGGCGCCTATTTCACCTTCGCCATCTCCCGTGAGGGCCATGTGTATGGCT
TTGGCCTCTCCAACTATCACCAGCTCGGAACTCCAGGCACTGGGTCTTGCTTCATTCCTCAAAA
CTTGACATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGTGGCCAGCATCATACA
GTCTGCATGGATTCAGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTACGGGCGGCTGGGCC
TTGGGGAGGGTGCTGAGGAGAAGAGCATACCCACCCTCATTTCCCGGCTACCGGTGGTCTCCTC
AGTGGCCTGTGGGGCTTCAGTGGGGTACGCTGTGTCCAAGGATGGTCGTGTTTTTGCCTGGGGC
ATGGGCACCAACTACCAACTGGGCACCGGGCAGGAGGACGATGCCTGGAGCCCGGTGGAGATGA
CTGGCAAACAGCTGGAGAACCGTGAGGTGTTAACGGTGTCCAGTGGGGGCCAGCACACAGTCTT
ACTAGTTAAGGACAAGACCCAAAGCTGATGACATCTTTGTGGGCCTGGCTTCTGGCCCCAACCC
AGCTTCACAGAACAGGAGCGGCCAGCTACAGATTCCAGAAGGCCCCTCCCCACCCCTGAGCAGA
AATCATCTCCTGTCTTTCCCATCACCACAGCAGAATCCTTTTTCCTTCTGTTTTGTCCTCTTTC
TAGAATCATCCTGGTACTTGTGGGATACGGGGGGGATGGGAGGAGGATCAGAAGATCTTAGCTT
ACCAGAGGCTTACTTTGTTAGACCTTTCTTCCCTTCGATACCCTGCCTCCTGTGGTCCTAGCTG
GCACTGGCTCCTGCCCTGGGGTTTTGGTGCCCACACTGAAAAGTTGGGACTCCATGAAGCCCTG
CTTCCCATGAGCCATTCTTTCTGTTCCTAACAGTTTACGAGGAGACAGATGGTTTGTATAGTCA
TCAGATCCAGTTGTCATGGACCCATGCCTGGAGAGCTGGACAAAGGCTTTCTGTGTGACCTAAG
CCAAATACTTGGCTCTAAACAGGTGTCCATGGGCAAAAACAGTGACCCACTTGAAGAAAACCAA
CTGTCCTCCCAAAAGCACAAAGCACCCAGTGTCCCTTGGGTGTCACCTGTCCGTTCCCCATCAG
TCAGCCTTTCTGCCATAGAGGACTAGATAGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAGGG
TATTGGGGAAGGGGTAGGGGTGGAGGGTTCTAATGGTGCTGAGGGAGGAGTGAAGGGAAAGGTG
TGGAGGGGCAGAGGCTGGTCCTAAGAAAAGTATAACAGTGGCTGAGAAAATAGTTTTGATTTTT
TTTAATTGTATGATATTTTGGAGGGGAGAGTAAAATCTTGTAACACTTTGAATAAATTTAGAGT
TTTATAAAGA

hide sequence

RefSeq Acc Id:

XM_008764173 ⟹ XP_008762395

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,822,435 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,538,410 (-)	NCBI
Rnor_6.0	5	150,508,840 - 150,521,253 (-)	NCBI

Sequence:

show sequence

ATGCTCGGGGCAGTTCGCGGCCGGCCGCCGAGCGCCGGAGTTGCTTGTGGCTGCCCTGCACCGA
GGCCTCTCTTAACCTTTCCTGCCCTGGAACTCACTGTGTAGACTAGGCTGGCTAGTCTTCGGAG
GTTAAAGGACAGGAAGATGCCACCCAAGCGCATAGCTAAGAGAAGGTCACCCCCAGAAGATGCT
ATCCCCAAAAGCAAGAAGGTGAAAGACACTCGTAACCGCCGTCCTGCTCCTCGCTCCTGCCAAG
TCTCACACAGGTCCCACAACACAGAACCAGGCTTGGTGCTGACATTGGGCCAGGGCGACGTGGG
CCAGCTGGGGCTGGGTGAGAGTGTGCTGGAGAGGAAGAAGCCGGCCTTGGTACCCCTTCTACAG
GATGTTGTGCAGGCCGAGGCCGGGGGCATGCACACTGTGTGTCTGAGCCAAAGTGGCCAGGTCT
ACTCCTTTGGCTGCAATGACGAGGGTGCCCTGGGAAGGGACACCTCAGTCGAGGGCTCCGAGAT
GGTCCCCGGGAAAGTGGAACTACAAGAGAAAGTGGTGCAAGTGTCAGCGGGAGACAGTCACACA
GCAGCTCTCACTGAAGACGGCCGAGTCTTCCTCTGGGGCTCTTTCCGGGACAATAATGGTGTGA
TCGGGTTGTTGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGACACGCAGGT
GGTAAAGGTAGCCTCGGGGAACGACCACTTGGTGATGCTCACAACTGATGGAGATCTCTACACC
TTGGGCTGTGGGGAGCAAGGTCAGCTGGGCCGTGTGCCTGAGTTATTTGCCAACCGAGGTGGCC
GTCAGGGCCTTGAGCGACTCCTAGTCCCCAGGTGTGTGCTGCTGAAGTCCCGGGGAACGCGGGG
CCGCGTGCGGTTCCAGGATGCCTTCTGTGGCGCCTATTTCACCTTCGCCATCTCCCGTGAGGGC
CATGTGTATGGCTTTGGCCTCTCCAACTATCACCAGCTCGGAACTCCAGGCACTGGGTCTTGCT
TCATTCCTCAAAACTTGACATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGTGG
CCAGCATCATACAGTCTGCATGGATTCAGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTAC
GGGCGGCTGGGCCTTGGGGAGGGTGCTGAGGAGAAGAGCATACCCACCCTCATTTCCCGGCTAC
CGGTGGTCTCCTCAGTGGCCTGTGGGGCTTCAGTGGGGTACGCTGTGTCCAAGGATGGTCGTGT
TTTTGCCTGGGGCATGGGCACCAACTACCAACTGGGCACCGGGCAGGAGGACGATGCCTGGAGC
CCGGTGGAGATGACTGGCAAACAGCTGGAGAACCGTGAGGTGTTAACGGTGTCCAGTGGGGGCC
AGCACACAGTCTTACTAGTTAAGGACAAGACCCAAAGCTGATGACATCTTTGTGGGCCTGGCTT
CTGGCCCCAACCCAGCTTCACAGAACAGGAGCGGCCAGCTACAGATTCCAGAAGGCCCCTCCCC
ACCCCTGAGCAGAAATCATCTCCTGTCTTTCCCATCACCACAGCAGAATCCTTTTTCCTTCTGT
TTTGTCCTCTTTCTAGAATCATCCTGGTACTTGTGGGATACGGGGGGGATGGGAGGAGGATCAG
AAGATCTTAGCTTACCAGAGGCTTACTTTGTTAGACCTTTCTTCCCTTCGATACCCTGCCTCCT
GTGGTCCTAGCTGGCACTGGCTCCTGCCCTGGGGTTTTGGTGCCCACACTGAAAAGTTGGGACT
CCATGAAGCCCTGCTTCCCATGAGCCATTCTTTCTGTTCCTAACAGTTTACGAGGAGACAGATG
GTTTGTATAGTCATCAGATCCAGTTGTCATGGACCCATGCCTGGAGAGCTGGACAAAGGCTTTC
TGTGTGACCTAAGCCAAATACTTGGCTCTAAACAGGTGTCCATGGGCAAAAACAGTGACCCACT
TGAAGAAAACCAACTGTCCTCCCAAAAGCACAAAGCACCCAGTGTCCCTTGGGTGTCACCTGTC
CGTTCCCCATCAGTCAGCCTTTCTGCCATAGAGGACTAGATAGCCATGCTGGGCTCGGCTGGGC
AGTCAAGGCAGGGTATTGGGGAAGGGGTAGGGGTGGAGGGTTCTAATGGTGCTGAGGGAGGAGT
GAAGGGAAAGGTGTGGAGGGGCAGAGGCTGGTCCTAAGAAAAGTATAACAGTGGCTGAGAAAAT
AGTTTTGATTTTTTTTAATTGTATGATATTTTGGAGGGGAGAGTAAAATCTTGTAACACTTTGA
ATAAATTTAGAGTTTTATAAAGA

hide sequence

RefSeq Acc Id:

XM_017593624 ⟹ XP_017449113

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,828,405 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,544,413 (-)	NCBI
Rnor_6.0	5	150,508,840 - 150,531,062 (-)	NCBI

Sequence:

show sequence

CGTGACATGCGCAGGCGCAGTCGGCAACAGCTGACTTCCGGAAGTTGCTTAAGGTATAAATACG
GCTGCGTCGGCGAGATTCTGTCTCTTTACCGGTTTCTCTCTGGGTCTGTACTCTGTAGAATTGA
TGAGTGATCCCAAAGAACTCATTGAGGAAAGAAGAGGATCTATCTGTACAGGTGCCTGTTGATT
TACTTGATAAAAGACTTTGAGGCCTTTTAATTATATGCAGCTTGGTGAAATCTTGTCCATATTA
TGGCCTCATCCATTGGAAGCTGGACAAGCTTTTGTGCCTACTCAATTTTGTCTGGCAATTACAT
TTTCCATACAGGTTGTGTCTAGATTTGTGAAAATGAAGCATGGTTCTCCTTTTTGAGGTCCAGG
AGGTTTCCCCAGGACCATGTTATATAAACTTTATATTTTTTGTTCCCATGTTCTCTGTAAGATT
GTAGCCATGAGTTCAGATCCAGAATGGGTTATTCGATCCAGTTGTAATCTATGAGTCTTTGTGA
TATGCCTGACAAGTTTGAATTAAAGCTTTTTGAATGCCTTTTCTTGTGATTTAATGTGTGCATG
CAGACGGCTACAGATGGGTTCAAGATAAACCGAGTGAATGTTTGATCCATCCAAGTACTGAAAT
TACATTCCTTCTGCTCTGGTGATAGTGTTGGGTGGGAAACTAGTCAAGTGAATTTGGGAGGTTA
GTCCTAAGCAGTTCAACTTGGACAGTCCTAAAACTGGGTAGCCTTGTGATAGAAGGTGGACAGA
TCCTGAGGTCATAATGGGAAGTTGATGACTCCTTGCTGCCTGCCTCCACGGAGCAGTCAGGGCC
CTCAATGATGGGGGCATTGAGGGGGCACCTCGAAGGTAGGCCTGAAGATGCTGGTATGTTTCCC
TGTTCTTGGAAATAAATTGGGCCTGCAGTGGGGCAATACTTGCATCTGTGGCCCCCTCTGACAG
AAAGGGTAGATGGAGCAGCATTCTCAATAGACACTAGCTAATGTTTATACTCCAGAGTGGAATC
CGGTGACCTTGGGAGGTTCTGTGTCCATGTGAGTGAATAAGATCTTGGAGAAAGACATTGGAGT
TTCCAGGGTGAAGCTTGGAGAAACTTCACCGTCTACCATCCAGGAGAGGTCATGATGGAGGCAG
AAGTAAACCTGAAAAGGACAGGAAGATGCCACCCAAGCGCATAGCTAAGAGAAGGTCACCCCCA
GAAGATGCTATCCCCAAAAGCAAGAAGGTGAAAGACACTCGTAACCGCCGTCCTGCTCCTCGCT
CCTGCCAAGTCTCACACAGGTCCCACAACACAGAACCAGGCTTGGTGCTGACATTGGGCCAGGG
CGACGTGGGCCAGCTGGGGCTGGGTGAGAGTGTGCTGGAGAGGAAGAAGCCGGCCTTGGTACCC
CTTCTACAGGATGTTGTGCAGGCCGAGGCCGGGGGCATGCACACTGTGTGTCTGAGCCAAAGTG
GCCAGGTCTACTCCTTTGGCTGCAATGACGAGGGTGCCCTGGGAAGGGACACCTCAGTCGAGGG
CTCCGAGATGGTCCCCGGGAAAGTGGAACTACAAGAGAAAGTGGTGCAAGTGTCAGCGGGAGAC
AGTCACACAGCAGCTCTCACTGAAGACGGCCGAGTCTTCCTCTGGGGCTCTTTCCGGGACAATA
ATGGTGTGATCGGGTTGTTGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGA
CACGCAGGTGGTAAAGGTAGCCTCGGGGAACGACCACTTGGTGATGCTCACAACTGATGGAGAT
CTCTACACCTTGGGCTGTGGGGAGCAAGGTCAGCTGGGCCGTGTGCCTGAGTTATTTGCCAACC
GAGGTGGCCGTCAGGGCCTTGAGCGACTCCTAGTCCCCAGGTGTGTGCTGCTGAAGTCCCGGGG
AACGCGGGGCCGCGTGCGGTTCCAGGATGCCTTCTGTGGCGCCTATTTCACCTTCGCCATCTCC
CGTGAGGGCCATGTGTATGGCTTTGGCCTCTCCAACTATCACCAGCTCGGAACTCCAGGCACTG
GGTCTTGCTTCATTCCTCAAAACTTGACATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTT
CTCTGGTGGCCAGCATCATACAGTCTGCATGGATTCAGAAGGAAAAGCATACAGCCTGGGCCGG
GCTGAGTACGGGCGGCTGGGCCTTGGGGAGGGTGCTGAGGAGAAGAGCATACCCACCCTCATTT
CCCGGCTACCGGTGGTCTCCTCAGTGGCCTGTGGGGCTTCAGTGGGGTACGCTGTGTCCAAGGA
TGGTCGTGTTTTTGCCTGGGGCATGGGCACCAACTACCAACTGGGCACCGGGCAGGAGGACGAT
GCCTGGAGCCCGGTGGAGATGACTGGCAAACAGCTGGAGAACCGTGAGGTGTTAACGGTGTCCA
GTGGGGGCCAGCACACAGTCTTACTAGTTAAGGACAAGACCCAAAGCTGATGACATCTTTGTGG
GCCTGGCTTCTGGCCCCAACCCAGCTTCACAGAACAGGAGCGGCCAGCTACAGATTCCAGAAGG
CCCCTCCCCACCCCTGAGCAGAAATCATCTCCTGTCTTTCCCATCACCACAGCAGAATCCTTTT
TCCTTCTGTTTTGTCCTCTTTCTAGAATCATCCTGGTACTTGTGGGATACGGGGGGGATGGGAG
GAGGATCAGAAGATCTTAGCTTACCAGAGGCTTACTTTGTTAGACCTTTCTTCCCTTCGATACC
CTGCCTCCTGTGGTCCTAGCTGGCACTGGCTCCTGCCCTGGGGTTTTGGTGCCCACACTGAAAA
GTTGGGACTCCATGAAGCCCTGCTTCCCATGAGCCATTCTTTCTGTTCCTAACAGTTTACGAGG
AGACAGATGGTTTGTATAGTCATCAGATCCAGTTGTCATGGACCCATGCCTGGAGAGCTGGACA
AAGGCTTTCTGTGTGACCTAAGCCAAATACTTGGCTCTAAACAGGTGTCCATGGGCAAAAACAG
TGACCCACTTGAAGAAAACCAACTGTCCTCCCAAAAGCACAAAGCACCCAGTGTCCCTTGGGTG
TCACCTGTCCGTTCCCCATCAGTCAGCCTTTCTGCCATAGAGGACTAGATAGCCATGCTGGGCT
CGGCTGGGCAGTCAAGGCAGGGTATTGGGGAAGGGGTAGGGGTGGAGGGTTCTAATGGTGCTGA
GGGAGGAGTGAAGGGAAAGGTGTGGAGGGGCAGAGGCTGGTCCTAAGAAAAGTATAACAGTGGC
TGAGAAAATAGTTTTGATTTTTTTTAATTGTATGATATTTTGGAGGGGAGAGTAAAATCTTGTA
ACACTTTGAATAAATTTAGAGTTTTATAAAGA

hide sequence

RefSeq Acc Id:

XM_017593626 ⟹ XP_017449115

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,828,471 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,544,445 (-)	NCBI
Rnor_6.0	5	150,508,840 - 150,531,062 (-)	NCBI

Sequence:

show sequence

CGTGACATGCGCAGGCGCAGTCGGCAACAGCTGACTTCCGGAAGTTGCTTAAGGTATAAATACG
GCTGCGTCGGCGAGATTCTGTCTCTTTACCGGTTTCTCTCTGGGTCTGTACTCTGTAGAATTGA
TGAGTGATCCCAAAGAACTCATTGAGGAAAGAAGAGGATCTATCTGTACAGGTGCCTGTTGATT
TACTTGATAAAAGACTTTGAGGCCTTTTAATTATATGCAGCTTGGTGAAATCTTGTCCATATTA
TGGCCTCATCCATTGGAAGCTGGACAAGCTTTTGTGCCTACTCAATTTTGTCTGGCAATTACAT
TTTCCATACAGGTTGTGTCTAGATTTGTGAAAATGAAGCATGGTTCTCCTTTTTGAGGTCCAGG
AGGTTTCCCCAGGACCATGTTATATAAACTTTATATTTTTTGTTCCCATGTTCTCTGTAAGATT
GTAGCCATGAGTTCAGATCCAGAATGGGTTATTCGATCCAGTTGTAATCTATGAGTCTTTGTGA
TATGCCTGACAAGTTTGAATTAAAGCTTTTTGAATGCCTTTTCTTGTGATTTAATGTGTGCATG
CAGACGGCTACAGATGGGTTCAAGATAAACCGAGTGAATGTTTGATCCATCCAAGTACTGAAAT
TACATTCCTTCTGCTCTGGTGATAGTGTTGGGTGGGAAACTAGTCAAGTGAATTTGGGAGGTTA
GTCCTAAGCAGTTCAACTTGGACAGTCCTAAAACTGGGTAGCCTTGTGATAGAAGGTGGACAGA
TCCTGAGGTCATAATGGGAAGTTGATGACTCCTTGCTGCCTGCCTCCACGGAGCAGTCAGGGCC
CTCAATGATGGGGGCATTGAGGGGGCACCTCGAAGGTAGGCCTGAAGATGCTGCCATGTGAGTG
AATAAGATCTTGGAGAAAGACATTGGAGTTTCCAGGGTGAAGCTTGGAGAAACTTCACCGTCTA
CCATCCAGGAGAGGTCATGATGGAGGCAGAAGTAAACCTGAAAAGGACAGGAAGATGCCACCCA
AGCGCATAGCTAAGAGAAGGTCACCCCCAGAAGATGCTATCCCCAAAAGCAAGAAGGTGAAAGA
CACTCGTAACCGCCGTCCTGCTCCTCGCTCCTGCCAAGTCTCACACAGGTCCCACAACACAGAA
CCAGGCTTGGTGCTGACATTGGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAGTGTGC
TGGAGAGGAAGAAGCCGGCCTTGGTACCCCTTCTACAGGATGTTGTGCAGGCCGAGGCCGGGGG
CATGCACACTGTGTGTCTGAGCCAAAGTGGCCAGGTCTACTCCTTTGGCTGCAATGACGAGGGT
GCCCTGGGAAGGGACACCTCAGTCGAGGGCTCCGAGATGGTCCCCGGGAAAGTGGAACTACAAG
AGAAAGTGGTGCAAGTGTCAGCGGGAGACAGTCACACAGCAGCTCTCACTGAAGACGGCCGAGT
CTTCCTCTGGGGCTCTTTCCGGGACAATAATGGTGTGATCGGGTTGTTGGAGCCCATGAAGAAG
AGCATGGTGCCTGTGCAGGTGCAGCTGGACACGCAGGTGGTAAAGGTAGCCTCGGGGAACGACC
ACTTGGTGATGCTCACAACTGATGGAGATCTCTACACCTTGGGCTGTGGGGAGCAAGGTCAGCT
GGGCCGTGTGCCTGAGTTATTTGCCAACCGAGGTGGCCGTCAGGGCCTTGAGCGACTCCTAGTC
CCCAGGTGTGTGCTGCTGAAGTCCCGGGGAACGCGGGGCCGCGTGCGGTTCCAGGATGCCTTCT
GTGGCGCCTATTTCACCTTCGCCATCTCCCGTGAGGGCCATGTGTATGGCTTTGGCCTCTCCAA
CTATCACCAGCTCGGAACTCCAGGCACTGGGTCTTGCTTCATTCCTCAAAACTTGACATCCTTC
AAGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGTGGCCAGCATCATACAGTCTGCATGGATT
CAGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTACGGGCGGCTGGGCCTTGGGGAGGGTGC
TGAGGAGAAGAGCATACCCACCCTCATTTCCCGGCTACCGGTGGTCTCCTCAGTGGCCTGTGGG
GCTTCAGTGGGGTACGCTGTGTCCAAGGATGGTCGTGTTTTTGCCTGGGGCATGGGCACCAACT
ACCAACTGGGCACCGGGCAGGAGGACGATGCCTGGAGCCCGGTGGAGATGACTGGCAAACAGCT
GGAGAACCGTGAGGTGTTAACGGTGTCCAGTGGGGGCCAGCACACAGTCTTACTAGTTAAGGAC
AAGACCCAAAGCTGATGACATCTTTGTGGGCCTGGCTTCTGGCCCCAACCCAGCTTCACAGAAC
AGGAGCGGCCAGCTACAGATTCCAGAAGGCCCCTCCCCACCCCTGAGCAGAAATCATCTCCTGT
CTTTCCCATCACCACAGCAGAATCCTTTTTCCTTCTGTTTTGTCCTCTTTCTAGAATCATCCTG
GTACTTGTGGGATACGGGGGGGATGGGAGGAGGATCAGAAGATCTTAGCTTACCAGAGGCTTAC
TTTGTTAGACCTTTCTTCCCTTCGATACCCTGCCTCCTGTGGTCCTAGCTGGCACTGGCTCCTG
CCCTGGGGTTTTGGTGCCCACACTGAAAAGTTGGGACTCCATGAAGCCCTGCTTCCCATGAGCC
ATTCTTTCTGTTCCTAACAGTTTACGAGGAGACAGATGGTTTGTATAGTCATCAGATCCAGTTG
TCATGGACCCATGCCTGGAGAGCTGGACAAAGGCTTTCTGTGTGACCTAAGCCAAATACTTGGC
TCTAAACAGGTGTCCATGGGCAAAAACAGTGACCCACTTGAAGAAAACCAACTGTCCTCCCAAA
AGCACAAAGCACCCAGTGTCCCTTGGGTGTCACCTGTCCGTTCCCCATCAGTCAGCCTTTCTGC
CATAGAGGACTAGATAGCCATGCTGGGCTCGGCTGGGCAGTCAAGGCAGGGTATTGGGGAAGGG
GTAGGGGTGGAGGGTTCTAATGGTGCTGAGGGAGGAGTGAAGGGAAAGGTGTGGAGGGGCAGAG
GCTGGTCCTAAGAAAAGTATAACAGTGGCTGAGAAAATAGTTTTGATTTTTTTTAATTGTATGA
TATTTTGGAGGGGAGAGTAAAATCTTGTAACACTTTGAATAAATTTAGAGTTTTATAAAGA

hide sequence

RefSeq Acc Id:

XM_017593627 ⟹ XP_017449116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,828,475 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,544,424 (-)	NCBI
Rnor_6.0	5	150,508,840 - 150,531,062 (-)	NCBI

Sequence:

show sequence

CGTGACATGCGCAGGCGCAGTCGGCAACAGCTGACTTCCGGAAGTTGCTTAAGGTATAAATACG
GCTGCGTCGGCGAGATTCTGTCTCTTTACCGGTTTCTCTCTGGGTCTGTACTCTGTAGAATTGA
TGAGTGATCCCAAAGAACTCATTGAGGAAAGAAGAGGATCTATCTGTACAGGTGCCTGTTGATT
TACTTGATAAAAGACTTTGAGGCCTTTTAATTATATGCAGCTTGGTGAAATCTTGTCCATATTA
TGGCCTCATCCATTGGAAGCTGGACAAGCTTTTGTGCCTACTCAATTTTGTCTGGCAATTACAT
TTTCCATACAGGTTGTGTCTAGATTTGTGAAAATGAAGCATGGTTCTCCTTTTTGAGGTCCAGG
AGGTTTCCCCAGGACCATGTTATATAAACTTTATATTTTTTGTTCCCATGTTCTCTGTAAGATT
GTAGCCATGAGTTCAGATCCAGAATGGGTTATTCGATCCAGTTGTAATCTATGAGTCTTTGTGA
TATGCCTGACAAGTTTGAATTAAAGCTTTTTGAATGCCTTTTCTTGTGATTTAATGTGTGCATG
CAGACGGCTACAGATGGGTTCAAGATAAACCGAGTGAATGTTTGATCCATCCAAGTACTGAAAT
TACATTCCTTCTGCTCTGGTGATAGTGTTGGGTGGGAAACTAGTCAAGTGAATTTGGGAGGTTA
GTCCTAAGCAGTTCAACTTGGACAGTCCTAAAACTGGGTAGCCTTGTGATAGAAGGTGGACAGA
TCCTGAGGTCATAATGGGAAGTTGATGACTCCTTGCTGCCTGCCTCCACGGAGCAGTCAGGGCC
CTCAATGATGGGGGCATTGAGGGGGCACCTCGAAGCCATGTGAGTGAATAAGATCTTGGAGAAA
GACATTGGAGTTTCCAGGGTGAAGCTTGGAGAAACTTCACCGTCTACCATCCAGGAGAGGTCAT
GATGGAGGCAGAAGTAAACCTGAAAAGGACAGGAAGATGCCACCCAAGCGCATAGCTAAGAGAA
GGTCACCCCCAGAAGATGCTATCCCCAAAAGCAAGAAGGTGAAAGACACTCGTAACCGCCGTCC
TGCTCCTCGCTCCTGCCAAGTCTCACACAGGTCCCACAACACAGAACCAGGCTTGGTGCTGACA
TTGGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAGTGTGCTGGAGAGGAAGAAGCCGG
CCTTGGTACCCCTTCTACAGGATGTTGTGCAGGCCGAGGCCGGGGGCATGCACACTGTGTGTCT
GAGCCAAAGTGGCCAGGTCTACTCCTTTGGCTGCAATGACGAGGGTGCCCTGGGAAGGGACACC
TCAGTCGAGGGCTCCGAGATGGTCCCCGGGAAAGTGGAACTACAAGAGAAAGTGGTGCAAGTGT
CAGCGGGAGACAGTCACACAGCAGCTCTCACTGAAGACGGCCGAGTCTTCCTCTGGGGCTCTTT
CCGGGACAATAATGGTGTGATCGGGTTGTTGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAG
GTGCAGCTGGACACGCAGGTGGTAAAGGTAGCCTCGGGGAACGACCACTTGGTGATGCTCACAA
CTGATGGAGATCTCTACACCTTGGGCTGTGGGGAGCAAGGTCAGCTGGGCCGTGTGCCTGAGTT
ATTTGCCAACCGAGGTGGCCGTCAGGGCCTTGAGCGACTCCTAGTCCCCAGGTGTGTGCTGCTG
AAGTCCCGGGGAACGCGGGGCCGCGTGCGGTTCCAGGATGCCTTCTGTGGCGCCTATTTCACCT
TCGCCATCTCCCGTGAGGGCCATGTGTATGGCTTTGGCCTCTCCAACTATCACCAGCTCGGAAC
TCCAGGCACTGGGTCTTGCTTCATTCCTCAAAACTTGACATCCTTCAAGAATTCCACCAAGTCC
TGGGTGGGCTTCTCTGGTGGCCAGCATCATACAGTCTGCATGGATTCAGAAGGAAAAGCATACA
GCCTGGGCCGGGCTGAGTACGGGCGGCTGGGCCTTGGGGAGGGTGCTGAGGAGAAGAGCATACC
CACCCTCATTTCCCGGCTACCGGTGGTCTCCTCAGTGGCCTGTGGGGCTTCAGTGGGGTACGCT
GTGTCCAAGGATGGTCGTGTTTTTGCCTGGGGCATGGGCACCAACTACCAACTGGGCACCGGGC
AGGAGGACGATGCCTGGAGCCCGGTGGAGATGACTGGCAAACAGCTGGAGAACCGTGAGGTGTT
AACGGTGTCCAGTGGGGGCCAGCACACAGTCTTACTAGTTAAGGACAAGACCCAAAGCTGATGA
CATCTTTGTGGGCCTGGCTTCTGGCCCCAACCCAGCTTCACAGAACAGGAGCGGCCAGCTACAG
ATTCCAGAAGGCCCCTCCCCACCCCTGAGCAGAAATCATCTCCTGTCTTTCCCATCACCACAGC
AGAATCCTTTTTCCTTCTGTTTTGTCCTCTTTCTAGAATCATCCTGGTACTTGTGGGATACGGG
GGGGATGGGAGGAGGATCAGAAGATCTTAGCTTACCAGAGGCTTACTTTGTTAGACCTTTCTTC
CCTTCGATACCCTGCCTCCTGTGGTCCTAGCTGGCACTGGCTCCTGCCCTGGGGTTTTGGTGCC
CACACTGAAAAGTTGGGACTCCATGAAGCCCTGCTTCCCATGAGCCATTCTTTCTGTTCCTAAC
AGTTTACGAGGAGACAGATGGTTTGTATAGTCATCAGATCCAGTTGTCATGGACCCATGCCTGG
AGAGCTGGACAAAGGCTTTCTGTGTGACCTAAGCCAAATACTTGGCTCTAAACAGGTGTCCATG
GGCAAAAACAGTGACCCACTTGAAGAAAACCAACTGTCCTCCCAAAAGCACAAAGCACCCAGTG
TCCCTTGGGTGTCACCTGTCCGTTCCCCATCAGTCAGCCTTTCTGCCATAGAGGACTAGATAGC
CATGCTGGGCTCGGCTGGGCAGTCAAGGCAGGGTATTGGGGAAGGGGTAGGGGTGGAGGGTTCT
AATGGTGCTGAGGGAGGAGTGAAGGGAAAGGTGTGGAGGGGCAGAGGCTGGTCCTAAGAAAAGT
ATAACAGTGGCTGAGAAAATAGTTTTGATTTTTTTTAATTGTATGATATTTTGGAGGGGAGAGT
AAAATCTTGTAACACTTTGAATAAATTTAGAGTTTTATAAAGA

hide sequence

RefSeq Acc Id:

XM_017593629 ⟹ XP_017449118

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,828,471 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,544,440 (-)	NCBI
Rnor_6.0	5	150,508,840 - 150,531,057 (-)	NCBI

Sequence:

show sequence

CATGCGCAGGCGCAGTCGGCAACAGCTGACTTCCGGAAGTTGCTTAAGGTATAAATACGGCTGC
GTCGGCGAGATTCTGTCTCTTTACCGGTTTCTCTCTGGGTCTGTACTCTGTAGAATTGATGAGT
GATCCCAAAGAACTCATTGAGGAAAGAAGAGGATCTATCTGTACAGGTGCCTGTTGATTTACTT
GATAAAAGACTTTGAGGCCTTTTAATTATATGCAGCTTGGTGAAATCTTGTCCATATTATGGCC
TCATCCATTGGAAGCTGGACAAGCTTTTGTGCCTACTCAATTTTGTCTGGCAATTACATTTTCC
ATACAGGTTGTGTCTAGATTTGTGAAAATGAAGCATGGTTCTCCTTTTTGAGGTCCAGGAGGTT
TCCCCAGGACCATGTTATATAAACTTTATATTTTTTGTTCCCATGTTCTCTGTAAGATTGTAGC
CATGAGTTCAGATCCAGAATGGGTTATTCGATCCAGTTGTAATCTATGAGTCTTTGTGATATGC
CTGACAAGTTTGAATTAAAGCTTTTTGAATGCCTTTTCTTGTGATTTAATGTGTGCATGCAGAC
GGCTACAGATGGGTTCAAGATAAACCGAGTGAATGTTTGATCCATCCAAGTACTGAAATTACAT
TCCTTCTGCTCTGGTGATAGTGTTGGGTGGGAAACTAGTCAAGTGAATTTGGGAGGTTAGTCCT
AAGCAGTTCAACTTGGACAGTCCTAAAACTGGGTAGCCTTGTGATAGAAGGTGGACAGATCCTG
AGGTCATAATGGGAAGTTGATGACTCCTTGCTGCCTGCCTCCACGGAGCAGTCAGGGCCCTCAA
TGATGGGGGCATTGAGGGGGCACCTCGAAGGTAGGCCTGAAGATGCTGCCATGTGAGTGAATAA
GATCTTGGAGAAAGACATTGGAGTTTCCAGGGTGAAGCTTGGAGAAACTTCACCGTCTACCATC
CAGGAGAGGTCATGATGGAGGCAGAAGTAAACCTGAAAAGGACAGGAAGATGCCACCCAAGCGC
ATAGCTAAGAGAAGGTCACCCCCAGAAGATGCTATCCCCAAAAGCAAGAAGGTGAAAGTCTCAC
ACAGGTCCCACAACACAGAACCAGGCTTGGTGCTGACATTGGGCCAGGGCGACGTGGGCCAGCT
GGGGCTGGGTGAGAGTGTGCTGGAGAGGAAGAAGCCGGCCTTGGTACCCCTTCTACAGGATGTT
GTGCAGGCCGAGGCCGGGGGCATGCACACTGTGTGTCTGAGCCAAAGTGGCCAGGTCTACTCCT
TTGGCTGCAATGACGAGGGTGCCCTGGGAAGGGACACCTCAGTCGAGGGCTCCGAGATGGTCCC
CGGGAAAGTGGAACTACAAGAGAAAGTGGTGCAAGTGTCAGCGGGAGACAGTCACACAGCAGCT
CTCACTGAAGACGGCCGAGTCTTCCTCTGGGGCTCTTTCCGGGACAATAATGGTGTGATCGGGT
TGTTGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGACACGCAGGTGGTAAA
GGTAGCCTCGGGGAACGACCACTTGGTGATGCTCACAACTGATGGAGATCTCTACACCTTGGGC
TGTGGGGAGCAAGGTCAGCTGGGCCGTGTGCCTGAGTTATTTGCCAACCGAGGTGGCCGTCAGG
GCCTTGAGCGACTCCTAGTCCCCAGGTGTGTGCTGCTGAAGTCCCGGGGAACGCGGGGCCGCGT
GCGGTTCCAGGATGCCTTCTGTGGCGCCTATTTCACCTTCGCCATCTCCCGTGAGGGCCATGTG
TATGGCTTTGGCCTCTCCAACTATCACCAGCTCGGAACTCCAGGCACTGGGTCTTGCTTCATTC
CTCAAAACTTGACATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTTCTCTGGTGGCCAGCA
TCATACAGTCTGCATGGATTCAGAAGGAAAAGCATACAGCCTGGGCCGGGCTGAGTACGGGCGG
CTGGGCCTTGGGGAGGGTGCTGAGGAGAAGAGCATACCCACCCTCATTTCCCGGCTACCGGTGG
TCTCCTCAGTGGCCTGTGGGGCTTCAGTGGGGTACGCTGTGTCCAAGGATGGTCGTGTTTTTGC
CTGGGGCATGGGCACCAACTACCAACTGGGCACCGGGCAGGAGGACGATGCCTGGAGCCCGGTG
GAGATGACTGGCAAACAGCTGGAGAACCGTGAGGTGTTAACGGTGTCCAGTGGGGGCCAGCACA
CAGTCTTACTAGTTAAGGACAAGACCCAAAGCTGATGACATCTTTGTGGGCCTGGCTTCTGGCC
CCAACCCAGCTTCACAGAACAGGAGCGGCCAGCTACAGATTCCAGAAGGCCCCTCCCCACCCCT
GAGCAGAAATCATCTCCTGTCTTTCCCATCACCACAGCAGAATCCTTTTTCCTTCTGTTTTGTC
CTCTTTCTAGAATCATCCTGGTACTTGTGGGATACGGGGGGGATGGGAGGAGGATCAGAAGATC
TTAGCTTACCAGAGGCTTACTTTGTTAGACCTTTCTTCCCTTCGATACCCTGCCTCCTGTGGTC
CTAGCTGGCACTGGCTCCTGCCCTGGGGTTTTGGTGCCCACACTGAAAAGTTGGGACTCCATGA
AGCCCTGCTTCCCATGAGCCATTCTTTCTGTTCCTAACAGTTTACGAGGAGACAGATGGTTTGT
ATAGTCATCAGATCCAGTTGTCATGGACCCATGCCTGGAGAGCTGGACAAAGGCTTTCTGTGTG
ACCTAAGCCAAATACTTGGCTCTAAACAGGTGTCCATGGGCAAAAACAGTGACCCACTTGAAGA
AAACCAACTGTCCTCCCAAAAGCACAAAGCACCCAGTGTCCCTTGGGTGTCACCTGTCCGTTCC
CCATCAGTCAGCCTTTCTGCCATAGAGGACTAGATAGCCATGCTGGGCTCGGCTGGGCAGTCAA
GGCAGGGTATTGGGGAAGGGGTAGGGGTGGAGGGTTCTAATGGTGCTGAGGGAGGAGTGAAGGG
AAAGGTGTGGAGGGGCAGAGGCTGGTCCTAAGAAAAGTATAACAGTGGCTGAGAAAATAGTTTT
GATTTTTTTTAATTGTATGATATTTTGGAGGGGAGAGTAAAATCTTGTAACACTTTGAATAAAT
TTAGAGTTTTATAAAGA

hide sequence

RefSeq Acc Id:

XM_039110773 ⟹ XP_038966701

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,828,471 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,544,445 (-)	NCBI

RefSeq Acc Id:

XM_039110774 ⟹ XP_038966702

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,828,471 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,544,441 (-)	NCBI

RefSeq Acc Id:

XM_039110775 ⟹ XP_038966703

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,817,600 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,533,534 (-)	NCBI

RefSeq Acc Id:

XM_039110777 ⟹ XP_038966705

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,822,300 (-)	NCBI
mRatBN7.2	5	144,526,025 - 144,538,281 (-)	NCBI

RefSeq Acc Id:

XM_063288405 ⟹ XP_063144475

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,828,405 (-)	NCBI

RefSeq Acc Id:

XM_063288406 ⟹ XP_063144476

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,828,475 (-)	NCBI

RefSeq Acc Id:

XM_063288407 ⟹ XP_063144477

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,828,405 (-)	NCBI

RefSeq Acc Id:

XM_063288409 ⟹ XP_063144479

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,822,432 (-)	NCBI

RefSeq Acc Id:

XM_063288410 ⟹ XP_063144480

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,810,037 - 149,822,300 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001121661	(Get FASTA)	NCBI Sequence Viewer
	XP_006239135	(Get FASTA)	NCBI Sequence Viewer
	XP_006239136	(Get FASTA)	NCBI Sequence Viewer
	XP_006239137	(Get FASTA)	NCBI Sequence Viewer
	XP_006239139	(Get FASTA)	NCBI Sequence Viewer
	XP_008762395	(Get FASTA)	NCBI Sequence Viewer
	XP_017449113	(Get FASTA)	NCBI Sequence Viewer
	XP_017449115	(Get FASTA)	NCBI Sequence Viewer
	XP_017449116	(Get FASTA)	NCBI Sequence Viewer
	XP_017449118	(Get FASTA)	NCBI Sequence Viewer
	XP_038966701	(Get FASTA)	NCBI Sequence Viewer
	XP_038966702	(Get FASTA)	NCBI Sequence Viewer
	XP_038966703	(Get FASTA)	NCBI Sequence Viewer
	XP_038966705	(Get FASTA)	NCBI Sequence Viewer
	XP_063144475	(Get FASTA)	NCBI Sequence Viewer
	XP_063144476	(Get FASTA)	NCBI Sequence Viewer
	XP_063144477	(Get FASTA)	NCBI Sequence Viewer
	XP_063144479	(Get FASTA)	NCBI Sequence Viewer
	XP_063144480	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI60834	(Get FASTA)	NCBI Sequence Viewer
	EDL80630	(Get FASTA)	NCBI Sequence Viewer
	EDL80631	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000066003
	ENSRNOP00000066003.1
	ENSRNOP00000074333.2
	ENSRNOP00000079225.1
	ENSRNOP00000081871
	ENSRNOP00000081871.1
	ENSRNOP00000091055.1

RefSeq Acc Id:

NP_001121661 ⟸ NM_001128189

- UniProtKB:

B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPPKRIAKRRSPPEDAIPKSKKVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP
LLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGD
SHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGD
LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAIS
REGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR
AEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDD
AWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS

hide sequence

RefSeq Acc Id:	XP_006239139 ⟸ XM_006239077
- Peptide Label:	isoform X2
- UniProtKB:	B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPKRIAKRRSPPEDAIPKSKKVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP LLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGD SHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGD LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAIS REGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR AEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDD AWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS hide sequence

RefSeq Acc Id:	XP_006239135 ⟸ XM_006239073
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZU07 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPKRIAKRRSPPEDAIPKSKKVKDTRNRRPAPRSCQVSHRSHNTEPGLVLTLGQGDVGQLGLG ESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV ELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVAS GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQ DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTV CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGM GTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS hide sequence

RefSeq Acc Id:	XP_006239137 ⟸ XM_006239075
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZU07 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPKRIAKRRSPPEDAIPKSKKVKDTRNRRPAPRSCQVSHRSHNTEPGLVLTLGQGDVGQLGLG ESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV ELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVAS GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQ DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTV CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGM GTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS hide sequence

RefSeq Acc Id:	XP_006239136 ⟸ XM_006239074
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZU07 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPKRIAKRRSPPEDAIPKSKKVKDTRNRRPAPRSCQVSHRSHNTEPGLVLTLGQGDVGQLGLG ESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV ELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVAS GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQ DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTV CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGM GTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS hide sequence

RefSeq Acc Id:	XP_008762395 ⟸ XM_008764173
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZU07 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPKRIAKRRSPPEDAIPKSKKVKDTRNRRPAPRSCQVSHRSHNTEPGLVLTLGQGDVGQLGLG ESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV ELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVAS GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQ DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTV CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGM GTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS hide sequence

RefSeq Acc Id:	XP_017449116 ⟸ XM_017593627
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZU07 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPKRIAKRRSPPEDAIPKSKKVKDTRNRRPAPRSCQVSHRSHNTEPGLVLTLGQGDVGQLGLG ESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV ELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVAS GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQ DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTV CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGM GTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS hide sequence

RefSeq Acc Id:	XP_017449115 ⟸ XM_017593626
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZU07 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPKRIAKRRSPPEDAIPKSKKVKDTRNRRPAPRSCQVSHRSHNTEPGLVLTLGQGDVGQLGLG ESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV ELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVAS GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQ DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTV CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGM GTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS hide sequence

RefSeq Acc Id:	XP_017449113 ⟸ XM_017593624
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZU07 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPKRIAKRRSPPEDAIPKSKKVKDTRNRRPAPRSCQVSHRSHNTEPGLVLTLGQGDVGQLGLG ESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV ELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVAS GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQ DAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTV CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGM GTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS hide sequence

RefSeq Acc Id:	XP_017449118 ⟸ XM_017593629
- Peptide Label:	isoform X2
- UniProtKB:	B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPKRIAKRRSPPEDAIPKSKKVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP LLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGD SHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGD LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAIS REGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR AEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDD AWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKTQS hide sequence

Ensembl Acc Id:

ENSRNOP00000074333 ⟸ ENSRNOT00000085482

Ensembl Acc Id:

ENSRNOP00000066003 ⟸ ENSRNOT00000075127

RefSeq Acc Id:	XP_038966701 ⟸ XM_039110773
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZU07 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966702 ⟸ XM_039110774
- Peptide Label:	isoform X2
- UniProtKB:	B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966705 ⟸ XM_039110777
- Peptide Label:	isoform X2
- UniProtKB:	B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966703 ⟸ XM_039110775
- Peptide Label:	isoform X2
- UniProtKB:	B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL), A0A0G2K7T1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000081871 ⟸ ENSRNOT00000101321

Ensembl Acc Id:

ENSRNOP00000079225 ⟸ ENSRNOT00000117781

Ensembl Acc Id:

ENSRNOP00000091055 ⟸ ENSRNOT00000108589

RefSeq Acc Id:	XP_063144476 ⟸ XM_063288406
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K7T1 (UniProtKB/TrEMBL), B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144475 ⟸ XM_063288405
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K7T1 (UniProtKB/TrEMBL), B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144477 ⟸ XM_063288407
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K7T1 (UniProtKB/TrEMBL), B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144479 ⟸ XM_063288409
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K7T1 (UniProtKB/TrEMBL), B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063144480 ⟸ XM_063288410
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K7T1 (UniProtKB/TrEMBL), B1H227 (UniProtKB/TrEMBL), M0R942 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B1H227-F1-model_v2	AlphaFold	B1H227	1-421	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694096

Promoter ID:

EPDNEW_R4619

Type:

single initiation site

Name:

Rcc1_1

Description:

regulator of chromosome condensation 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	150,525,262 - 150,525,322	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1592835	AgrOrtholog
BioCyc Gene	G2FUF-39694	BioCyc
Ensembl Genes	ENSRNOG00000050106	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000075127	ENTREZGENE
	ENSRNOT00000075127.2	UniProtKB/TrEMBL
	ENSRNOT00000085482.2	UniProtKB/TrEMBL
	ENSRNOT00000101321	ENTREZGENE
	ENSRNOT00000101321.1	UniProtKB/TrEMBL
	ENSRNOT00000108589.1	UniProtKB/TrEMBL
	ENSRNOT00000117781.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.30	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7456254	IMAGE-MGC_LOAD
InterPro	Ran_GTPase-activating	UniProtKB/TrEMBL
	Reg_chr_condens	UniProtKB/TrEMBL
	Reg_csome_cond/b-lactamase_inh	UniProtKB/TrEMBL
KEGG Report	rno:682908	UniProtKB/TrEMBL
MGC_CLONE	MGC:187541	IMAGE-MGC_LOAD
NCBI Gene	682908	ENTREZGENE
PANTHER	REGULATOR OF CHROMOSOME CONDENSATION	UniProtKB/TrEMBL
	REGULATOR OF CHROMOSOME CONDENSATION	UniProtKB/TrEMBL
Pfam	RCC1	UniProtKB/TrEMBL
PhenoGen	Rcc1	PhenoGen
PRINTS	RCCNDNSATION	UniProtKB/TrEMBL
PROSITE	RCC1_1	UniProtKB/TrEMBL
	RCC1_2	UniProtKB/TrEMBL
	RCC1_3	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000050106	RatGTEx
Superfamily-SCOP	RCC1/BLIP-II	UniProtKB/TrEMBL
UniProt	A0A0G2K7T1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZMN7_RAT	UniProtKB/TrEMBL
	A0A8I5ZU07	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AEW5_RAT	UniProtKB/TrEMBL
	B1H227	ENTREZGENE, UniProtKB/TrEMBL
	M0R942	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2010-12-10	Rcc1	regulator of chromosome condensation 1	LOC682908	similar to chromosome condensation 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-20	LOC682908	similar to chromosome condensation 1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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