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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:colorectal cancer
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Accession:DOID:9256 term browser browse the term
Definition:A large intestine cancer that is located_in the colon and/or located_in the rectum. (DO)
Synonyms:exact_synonym: CRC;   colorectal cancers;   malignant colorectal neoplasm
 narrow_synonym: COLORECTAL CANCER 1;   COLORECTAL CANCER WITH CHROMOSOMAL INSTABILITY, SOMATIC;   DLC1-RELATED CONDITION;   FAMILIAL COLORECTAL CANCER
 broad_synonym: AXIN2-RELATED DISORDER
 related_synonym: COLORECTAL ADENOMA AND CANCER, SUSCEPTIBILITY TO;   COLORECTAL CANCER WITH CHROMOSOMAL INSTABILITY;   CRCS1;   CRCS11;   CRCS12;   CRCS2;   CRCS3;   CRCS5;   CRCS6;   CRCS7;   CRCS8;   CRCS9;   Colorectal cancer, increased risk, assoc. with;   colorectal cancer, susceptibility to;   colorectal cancer, susceptibility to, 1;   colorectal cancer, susceptibility to, 11;   colorectal cancer, susceptibility to, 12;   colorectal cancer, susceptibility to, 2;   colorectal cancer, susceptibility to, 3;   colorectal cancer, susceptibility to, 5;   colorectal cancer, susceptibility to, 6;   colorectal cancer, susceptibility to, 7;   colorectal cancer, susceptibility to, 8;   colorectal cancer, susceptibility to, 9;   colorectal cancer, susceptibility to, on chromosome 11;   colorectal cancer, susceptibility to, on chromosome 12q24;   colorectal cancer, susceptibility to, on chromosome 14q;   colorectal cancer, susceptibility to, on chromosome 16q;   colorectal cancer, susceptibility to, on chromosome 18;   colorectal cancer, susceptibility to, on chromosome 20p;   colorectal cancer, susceptibility to, on chromosome 8q23;   colorectal cancer, susceptibility to, on chromosome 8q24;   colorectal cancer, susceptibility to, on chromosome 9
 alt_id: MIM:114500;   MIM:608812;   MIM:611469;   MIM:612229;   MIM:612230;   MIM:612231;   MIM:612232;   MIM:612589;   MIM:612590;   MIM:612592;   MIM:615083
 xref: EFO:0005842;   ICD10CM:C18.9;   NCI:C2956;   NCI:C4978


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colorectal cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AAGAB alpha and gamma adaptin binding protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:46,148,937...46,207,186
Ensembl chr15:64,419,994...64,477,586 		JBrowse link
G ABHD17C abhydrolase domain containing 17C, depalmitoylase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:59,676,295...59,736,771 JBrowse link
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:67,780,453...67,891,454
Ensembl chr15:86,987,070...87,095,818 		JBrowse link
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase ameliorates
disease_progression		 ISO human gene in mouse model
mRNA, protein:increased expression:colorectum (human)		 RGD PMID:32850446 RGD:126908002 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G ACAN aggrecan ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:67,492,494...67,563,265
Ensembl chr15:86,733,853...86,771,420 		JBrowse link
G ACSBG1 acyl-CoA synthetase bubblegum family member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,098,752...57,164,119
Ensembl chr15:76,064,937...76,128,835 		JBrowse link
G ADA adenosine deaminase disease_progression ISO RGD PMID:11114712 RGD:152995282 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 severity ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar
RGD		 PMID:28492532 PMID:31565100 RGD:153298908 NCBI chr15:37,562,930...37,717,175
Ensembl chr15:55,873,606...56,027,188 		JBrowse link
G ADAM28 ADAM metallopeptidase domain 28 severity ISO mRNA,protein:decreased expression:colorectum RGD PMID:27661126 PMID:31565100 RGD:153298906 RGD:153298908 NCBI chr 8:23,549,892...23,623,859
Ensembl chr 8:20,474,029...20,540,692 		JBrowse link
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:61,291,451...61,295,148 JBrowse link
G ADAMTSL3 ADAMTS like 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:61,567,731...61,953,255
Ensembl chr15:81,538,868...81,920,292 		JBrowse link
G ADAR adenosine deaminase RNA specific ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 1:129,937,993...129,983,747 JBrowse link
G ADGRB1 adhesion G protein-coupled receptor B1 ISO mRNA:decreased expression:colorectum RGD PMID:9772287 RGD:13831353 NCBI chr 8:139,154,065...139,251,115
Ensembl chr 8:142,220,827...142,301,070 		JBrowse link
G ADM adrenomedullin ISO mRNA,protein:increased expression:colorectum (human) RGD PMID:21839130 RGD:152985531 NCBI chr11:10,437,712...10,440,053
Ensembl chr11:10,165,418...10,167,842 		JBrowse link
G ADPGK ADP dependent glucokinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,669,462...51,702,439
Ensembl chr15:70,429,956...70,462,444 		JBrowse link
G AEN apoptosis enhancing nuclease ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:67,237,871...67,321,808
Ensembl chr15:86,518,204...86,529,579 		JBrowse link
G AFF4 ALF transcription elongation factor 4 disease_progression ISO RGD PMID:35223479 RGD:155631267 NCBI chr 5:128,292,700...128,374,511
Ensembl chr 5:134,457,398...134,532,625 		JBrowse link
G AFG2B AFG2 AAA ATPase homolog B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,350,226...24,369,308
Ensembl chr15:42,681,127...42,699,801 		JBrowse link
G AGBL1 AGBL carboxypeptidase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:64,774,408...65,603,628
Ensembl chr15:84,048,348...84,938,150 		JBrowse link
G AKAP13 A-kinase anchoring protein 13 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:64,076,422...64,438,109
Ensembl chr15:83,387,667...83,651,362 		JBrowse link
G AKAP9 A-kinase anchoring protein 9 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:23861362 PMID:24033266 PMID:25741868 PMID:28492532 NCBI chr 7:83,942,590...84,108,648
Ensembl chr 7:97,540,356...97,705,608 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 ameliorates
disease_progression
susceptibility		 ISO human cells in mouse model
protein:increased serine phosphorylation:colon
DNA:point mutation:cds:p.E17K (human)		 OMIM
RGD		 PMID:17611497 PMID:21425139 PMID:30789971 RGD:13209139 RGD:151893289 RGD:1643334 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G AKT2 AKT serine/threonine kinase 2 onset ISO protein:increased expression:colon (rat)
protein:increased expression:colon (human)		 RGD PMID:11756242 RGD:2313394 NCBI chr19:37,275,799...37,331,971
Ensembl chr19:45,791,800...45,840,271 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168 		JBrowse link
G ALPK3 alpha kinase 3 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 ClinVar PMID:28492532 NCBI chr15:63,484,027...63,541,021 JBrowse link
G ALX4 ALX homeobox 4 ISO DNA:hypermethylation:serum: RGD PMID:17101318 PMID:26918234 RGD:153323327 RGD:153344524 NCBI chr11:44,219,865...44,269,597 JBrowse link
G AMER1 APC membrane recruitment protein 1 onset
exacerbates		 ISO DNA:mutations: (human)
ClinVar Annotator: match by term: Colorectal cancer
protein:decreased expression:colonic mucosa (human)		 RGD
ClinVar		 PMID:28492532 PMID:30631060 PMID:31243121 PMID:34549727 PMID:34771502 RGD:151665181 RGD:151665183 NCBI chr  X:53,309,868...53,331,151
Ensembl chr  X:63,396,392...63,399,802 		JBrowse link
G ANKDD1A ankyrin repeat and death domain containing 1A ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:28492532 NCBI chr15:43,851,575...43,898,578
Ensembl chr15:62,137,207...62,181,984 		JBrowse link
G ANKRD34C ankyrin repeat domain 34C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:58,246,752...58,267,478
Ensembl chr15:77,220,348...77,221,955 		JBrowse link
G ANKRD63 ankyrin repeat domain 63 ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:28492532 NCBI chr15:19,212,457...19,217,434 JBrowse link
G ANP32A acidic nuclear phosphoprotein 32 family member A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:47,736,770...47,778,763
Ensembl chr15:66,502,285...66,511,637 		JBrowse link
G ANPEP alanyl aminopeptidase, membrane ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,479,349...68,509,238
Ensembl chr15:87,681,826...87,703,713 		JBrowse link
G ANTXR1 ANTXR cell adhesion molecule 1 ISO mRNA:increased expression:blood: RGD PMID:21573768 RGD:9684945 NCBI chr2A:69,054,253...69,290,554
Ensembl chr2A:70,175,982...70,412,454 		JBrowse link
G ANXA2 annexin A2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250 		JBrowse link
G AP3B2 adaptor related protein complex 3 subunit beta 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:62,888,359...62,938,758
Ensembl chr15:80,557,967...80,607,475 		JBrowse link
G AP3S2 adaptor related protein complex 3 subunit sigma 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,524,982...68,583,917 JBrowse link
G AP4E1 adaptor related protein complex 4 subunit epsilon 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:29,857,818...29,957,158
Ensembl chr15:48,195,581...48,288,895 		JBrowse link
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm		 OMIM
ClinVar		 PMID:1316610 PMID:1324223 PMID:1338764 PMID:1651174 PMID:1651563 More... NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709 		JBrowse link
G APH1B aph-1 homolog B, gamma-secretase subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:42,224,593...42,256,202
Ensembl chr15:60,520,031...60,551,599 		JBrowse link
G APOC3 apolipoprotein C3 disease_progression ISO RGD PMID:31502404 RGD:153344612 NCBI chr11:111,667,816...111,670,861
Ensembl chr11:115,600,416...115,603,460 		JBrowse link
G AQP9 aquaporin 9 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:37,107,061...37,154,887
Ensembl chr15:55,418,767...55,466,541 		JBrowse link
G AQR aquarius intron-binding spliceosomal factor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:13,774,234...13,891,046
Ensembl chr15:32,036,653...32,149,157 		JBrowse link
G ARHGAP11A Rho GTPase activating protein 11A ISO ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr15:11,109,968...11,134,362
Ensembl chr15:29,947,018...29,972,748 		JBrowse link
G ARID1A AT-rich interaction domain 1A disease_progression
exacerbates		 ISO protein:decreased expression:colorectum (human)
ClinVar Annotator: match by term: Colorectal cancer		 RGD
ClinVar		 PMID:25561809 PMID:31263894 RGD:126777686 RGD:126779574 NCBI chr 1:25,960,868...26,047,057
Ensembl chr 1:27,018,616...27,103,239 		JBrowse link
G ARID2 AT-rich interaction domain 2 exacerbates ISO RGD PMID:33262464 RGD:150429650 NCBI chr12:42,823,236...43,004,465
Ensembl chr12:43,692,914...43,871,564 		JBrowse link
G ARID3B AT-rich interaction domain 3B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,482,870...53,542,063
Ensembl chr15:73,104,984...73,159,422 		JBrowse link
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,423,132...51,534,278
Ensembl chr15:70,187,722...70,297,226 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:59,376,993...59,573,925 JBrowse link
G ARPIN actin related protein 2/3 complex inhibitor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532
G ARPP19 cAMP regulated phosphoprotein 19 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:31,488,156...31,510,404
Ensembl chr15:49,813,447...49,835,051 		JBrowse link
G ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 disease_progression ISO mRNA, protein:increased expression:colon (human) RGD PMID:28502111 RGD:153305906 NCBI chr 1:22,620,812...22,676,755
Ensembl chr 1:23,606,579...23,662,472 		JBrowse link
G ATM ATM serine/threonine kinase disease_progression ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
DNA:mutations		 RGD
ClinVar		 PMID:100011 PMID:9443866 PMID:9887333 PMID:10330348 PMID:10817650 More... RGD:126790575 RGD:150340714 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G ATOSA atos homolog A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:31,522,297...31,620,560
Ensembl chr15:49,848,026...49,944,808 		JBrowse link
G ATP8B4 ATPase phospholipid transporting 8B4 (putative) ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:28,803,848...29,060,526
Ensembl chr15:47,129,277...47,389,559 		JBrowse link
G AURKA aurora kinase A susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer OMIM
ClinVar		 PMID:25741868 NCBI chr20:52,707,757...52,730,579
Ensembl chr20:53,994,881...54,017,339 		JBrowse link
G AVEN apoptosis and caspase activation inhibitor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,379,221...12,574,147 JBrowse link
G AXIN2 axin 2 treatment
disease_progression		 ISO ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
DNA:SNP::rs2240308, c.148G>A(human)		 OMIM
ClinVar
RGD		 PMID:9536098 PMID:11017067 PMID:12101426 PMID:15042511 PMID:15735151 More... RGD:151356510 RGD:151356662 NCBI chr17:59,476,336...59,509,358
Ensembl chr17:64,688,416...64,720,086 		JBrowse link
G B2M beta-2-microglobulin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991 		JBrowse link
G BAHD1 bromo adjacent homology domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,376,233...19,404,699
Ensembl chr15:37,630,476...37,657,918 		JBrowse link
G BAMBI BMP and activin membrane bound inhibitor disease_progression ISO RGD PMID:18756595 PMID:29085481 RGD:14390154 RGD:14390156 NCBI chr10:28,833,690...28,839,164
Ensembl chr10:29,187,857...29,193,324 		JBrowse link
G BARHL2 BarH like homeobox 2 severity ISO RGD PMID:27453340 RGD:14392684 NCBI chr 1:93,373,317...93,378,667
Ensembl chr 1:92,121,017...92,126,036 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator ISO OMIM NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964 		JBrowse link
G BCL2A1 BCL2 related protein A1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:58,925,853...58,935,122
Ensembl chr15:77,882,940...77,893,628 		JBrowse link
G BCL2L10 BCL2 like 10 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:31,049,509...31,057,273
Ensembl chr15:49,376,576...49,380,109 		JBrowse link
G BCOR BCL6 corepressor treatment ISO RGD PMID:27880939 RGD:150340704 NCBI chr  X:32,497,931...32,624,307
Ensembl chr  X:40,202,235...40,249,986 		JBrowse link
G BIRC2 baculoviral IAP repeat containing 2 exacerbates ISO mRNA:decreased expression:colonic mucosa (human) RGD PMID:27827395 RGD:153344527 NCBI chr11:97,298,736...97,324,966
Ensembl chr11:100,793,036...100,822,421 		JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 exacerbates ISO protein:increased expression:colorectal mucosa, cytoplasm (human)
mRNA:decreased expression:colonic mucosa (human)
mRNA:increased expression:colorectum (human)		 RGD PMID:27827395 PMID:30653121 PMID:34389694 RGD:152999015 RGD:153305952 RGD:153344527 NCBI chr11:97,269,778...97,290,112
Ensembl chr11:100,763,274...100,785,194 		JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 ISO mRNA, protein:increased expression:colonic mucosa (human) RGD PMID:27827395 RGD:153344527 NCBI chr17:72,292,332...72,303,493
Ensembl chr17:77,842,724...77,854,159 		JBrowse link
G BLM BLM RecQ like helicase ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,469,225...24,553,163
Ensembl chr15:42,862,112...42,882,316 		JBrowse link
G BMF Bcl2 modifying factor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,026,053...19,047,008
Ensembl chr15:37,281,655...37,302,075 		JBrowse link
G BNC1 basonuclin zinc finger protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:62,316,229...62,345,123
Ensembl chr15:81,146,417...81,174,007 		JBrowse link
G BNIP2 BCL2 interacting protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:38,628,798...38,659,161
Ensembl chr15:56,933,697...56,964,044 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm		 OMIM
ClinVar		 PMID:2500657 PMID:12068308 PMID:12198537 PMID:12447372 PMID:12460918 More... NCBI chr 7:132,651,908...132,855,422
Ensembl chr 7:145,138,510...145,327,115 		JBrowse link
G BRCA1 BRCA1 DNA repair associated disease_progression
onset		 ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 RGD
ClinVar		 PMID:16533773 PMID:20862552 PMID:25741868 PMID:28492532 PMID:30209399 More... RGD:126790575 RGD:126925961 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCA2 BRCA2 DNA repair associated severity ISO ClinVar Annotator: match by term: Colorectal cancer RGD
ClinVar		 PMID:16533773 PMID:28492532 PMID:33609447 RGD:126790575 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G BRF1 BRF1 general transcription factor IIIB subunit ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr14:85,851,908...85,950,489
Ensembl chr14:105,635,757...105,714,465 		JBrowse link
G BRIP1 BRCA1 interacting DNA helicase 1 severity
susceptibility		 ISO mRNA:increased expression:colon epithelium (human)
ClinVar Annotator: match by term: Colorectal cancer
DNA:frameshift mutation:cds:p.N568fsX9 (human)		 RGD
ClinVar		 PMID:22526901 PMID:25741868 PMID:27165003 PMID:28492532 PMID:30809968 RGD:11252105 RGD:11252117 NCBI chr17:55,786,568...55,973,366
Ensembl chr17:60,901,073...61,083,462 		JBrowse link
G BTBD1 BTB domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:62,535,893...62,589,656
Ensembl chr15:80,904,436...80,957,494 		JBrowse link
G BTK Bruton tyrosine kinase exacerbates
disease_progression		 ISO protein:increased expression:colorectum (human) RGD PMID:31238520 PMID:31518438 RGD:151347850 RGD:151347852 NCBI chr  X:90,551,874...90,588,786
Ensembl chr  X:100,684,017...100,725,187 		JBrowse link
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer with chromosomal instability, somatic
DNA:splice-site mutation, missense mutation		 OMIM
ClinVar
RGD		 PMID:9521327 RGD:1600539 NCBI chr2A:91,393,317...91,433,579
Ensembl chr2A:111,793,236...111,858,392 		JBrowse link
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer OMIM
ClinVar		 PMID:9536098 PMID:17576681 PMID:20516114 PMID:24033266 PMID:24728327 More... NCBI chr15:19,095,383...19,155,557
Ensembl chr15:37,350,826...37,410,648 		JBrowse link
G C16H15orf39 chromosome 16 C15orf39 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,142,547...54,152,833
Ensembl chr15:73,753,921...73,767,224 		JBrowse link
G C16H15orf40 chromosome 16 C15orf40 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:62,594,213...62,601,425
Ensembl chr15:80,879,368...80,899,648 		JBrowse link
G C16H15orf48 chromosome 16 C15orf48 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,378,440...24,381,280
Ensembl chr15:42,709,122...42,727,209 		JBrowse link
G C16H15orf61 chromosome 16 C15orf61 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:46,471,604...46,477,100
Ensembl chr15:64,740,039...64,746,144 		JBrowse link
G C16H15orf62 chromosome 16 C15orf62 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,709,049...19,713,564
Ensembl chr15:37,963,669...37,964,196 		JBrowse link
G C2CD4A C2 calcium dependent domain containing 4A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:41,020,652...41,031,100 JBrowse link
G C2CD4B C2 calcium dependent domain containing 4B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:41,113,568...41,125,725 JBrowse link
G C9H11orf65 chromosome 9 C11orf65 homolog ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:100011 PMID:9443866 PMID:9887333 PMID:10330348 PMID:10817650 More... NCBI chr11:103,195,244...103,352,211
Ensembl chr11:106,670,277...106,817,886 		JBrowse link
G CA12 carbonic anhydrase 12 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:42,270,188...42,328,952
Ensembl chr15:60,565,592...60,624,008 		JBrowse link
G CALML4 calmodulin like 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:47,140,272...47,155,700
Ensembl chr15:65,409,732...65,424,852 		JBrowse link
G CALR calreticulin ISO protein:decreased expression:colorectum (human) RGD PMID:26913609 RGD:150521695 NCBI chr19:12,501,013...12,506,909
Ensembl chr19:13,242,900...13,249,416 		JBrowse link
G CASP9 caspase 9 no_association ISO DNA:SNP:promoter:-1263A>G (human)
DNA:SNPs::rs4646077, rs4233532, rs2881930 (human)		 RGD PMID:21538054 PMID:23303631 RGD:13210582 RGD:13210584 NCBI chr 1:14,630,659...14,662,865
Ensembl chr 1:15,624,666...15,656,266 		JBrowse link
G CATSPER2 cation channel sperm associated 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 Ensembl chr15:40,769,539...40,795,723 JBrowse link
G CBL Cbl proto-oncogene disease_progression ISO RGD PMID:30029779 RGD:126925222 NCBI chr11:114,044,996...114,149,204
Ensembl chr11:117,973,187...118,074,671 		JBrowse link
G CCDC32 coiled-coil domain containing 32 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,466,344...19,510,553
Ensembl chr15:37,726,474...37,763,602 		JBrowse link
G CCDC33 coiled-coil domain containing 33 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,158,057...53,278,500
Ensembl chr15:72,800,067...72,899,576
Ensembl chr15:72,800,067...72,899,576 		JBrowse link
G CCDC9B coiled-coil domain containing 9B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,265,502...19,275,023
Ensembl chr15:37,520,475...37,529,968 		JBrowse link
G CCNB2 cyclin B2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:38,075,106...38,095,699
Ensembl chr15:56,382,391...56,402,299 		JBrowse link
G CCND1 cyclin D1 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to ClinVar
OMIM		 PMID:10667569 PMID:11459873 PMID:12097293 PMID:23502783 PMID:24870244 More... NCBI chr11:64,737,006...64,750,353 JBrowse link
G CCND2 cyclin D2 severity ISO mRNA, protein:increased expression:colorectum RGD PMID:19508551 PMID:28933597 PMID:31511084 RGD:151664740 RGD:151664741 RGD:151665111 NCBI chr12:4,385,957...4,417,602
Ensembl chr12:4,309,272...4,335,551 		JBrowse link
G CCNDBP1 cyclin D1 binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,146,561...22,156,570
Ensembl chr15:40,301,401...40,311,443 		JBrowse link
G CCPG1 cell cycle progression 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:34,324,670...34,382,141
Ensembl chr15:52,647,392...52,701,880 		JBrowse link
G CD276 CD276 molecule ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:52,594,719...52,625,047 JBrowse link
G CDAN1 codanin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,684,234...21,697,840
Ensembl chr15:39,838,604...39,851,562 		JBrowse link
G CDC73 cell division cycle 73 ameliorates ISO mRNA:increased expression:colorectum (human) RGD PMID:21315421 RGD:150539448 NCBI chr 1:168,581,730...168,710,915
Ensembl chr 1:172,875,365...173,004,934 		JBrowse link
G CDH1 cadherin 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr16:49,108,745...49,206,347
Ensembl chr16:68,502,584...68,596,488 		JBrowse link
G CDIN1 CDAN1 interacting nuclease 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:15,503,685...15,734,015
Ensembl chr15:33,762,079...33,990,777 		JBrowse link
G CEMIP cell migration inducing hyaluronidase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:59,760,481...59,932,698
Ensembl chr15:78,810,600...78,888,723 		JBrowse link
G CEP152 centrosomal protein 152 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:27,665,278...27,760,808
Ensembl chr15:46,011,447...46,084,233 		JBrowse link
G CFAP161 cilia and flagella associated protein 161 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:60,113,489...60,134,987
Ensembl chr15:79,075,432...79,090,283 		JBrowse link
G CGNL1 cingulin like 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:36,344,222...36,518,235
Ensembl chr15:54,669,190...54,831,595 		JBrowse link
G CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,895,554...19,898,672
Ensembl chr15:38,145,730...38,148,698 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 exacerbates ISO mRNA:increased expression:lymph node (human) RGD PMID:28486105 PMID:29467924 RGD:153323299 RGD:153323304 NCBI chr12:6,701,004...6,738,621
Ensembl chr12:6,619,089...6,656,076 		JBrowse link
G CHEK2 checkpoint kinase 2 susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
DNA:loss of heterozygosity
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm		 ClinVar
RGD		 PMID:3313277 PMID:10617473 PMID:11053450 PMID:11298456 PMID:11390408 More... RGD:2289706 NCBI chr22:9,757,038...9,811,171 JBrowse link
G CHP1 calcineurin like EF-hand protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,172,874...20,223,382
Ensembl chr15:38,418,815...38,467,681 		JBrowse link
G CHRM5 cholinergic receptor muscarinic 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,478,656...12,575,512
Ensembl chr15:31,406,198...31,407,796 		JBrowse link
G CHRNA3 cholinergic receptor nicotinic alpha 3 subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,523,553...57,550,228
Ensembl chr15:76,487,710...76,512,044 		JBrowse link
G CHRNA5 cholinergic receptor nicotinic alpha 5 subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,493,730...57,530,463
Ensembl chr15:76,455,165...76,486,376 		JBrowse link
G CHRNB4 cholinergic receptor nicotinic beta 4 subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,552,697...57,570,828
Ensembl chr15:76,515,455...76,532,712 		JBrowse link
G CHST14 carbohydrate sulfotransferase 14 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,407,477...19,409,645
Ensembl chr15:37,660,621...37,661,622 		JBrowse link
G CIAO2A cytosolic iron-sulfur assembly component 2A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,025,577...43,047,013
Ensembl chr15:61,317,188...61,338,337 		JBrowse link
G CIB1 calcium and integrin binding 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,919,377...68,923,213 JBrowse link
G CIB2 calcium and integrin binding family member 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,033,782...57,060,650
Ensembl chr15:75,998,797...76,025,485 		JBrowse link
G CILP cartilage intermediate layer protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,142,312...44,159,395
Ensembl chr15:62,425,780...62,441,214 		JBrowse link
G CIMAP1C ciliary microtubule associated protein 1C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,630,808...54,636,066
Ensembl chr15:74,225,859...74,229,571 		JBrowse link
G CLK3 CDC like kinase 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,550,793...53,576,744
Ensembl chr15:73,181,664...73,196,148 		JBrowse link
G CLN6 CLN6 transmembrane ER protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:47,156,583...47,215,805
Ensembl chr15:65,425,472...65,985,242 		JBrowse link
G CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit X ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,088,070...44,128,730
Ensembl chr15:62,374,068...62,412,746 		JBrowse link
G COMMD4 COMM domain containing 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,252,289...54,256,637
Ensembl chr15:73,848,231...73,852,531 		JBrowse link
G COPS2 COP9 signalosome subunit 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:28,073,237...28,103,615
Ensembl chr15:46,396,077...46,426,396 		JBrowse link
G CORO2B coronin 2B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:47,536,641...47,685,357
Ensembl chr15:66,370,374...66,452,545 		JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:62,949,264...63,053,994
Ensembl chr15:80,443,096...80,526,948 		JBrowse link
G CPLX3 complexin 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,769,138...53,774,330
Ensembl chr15:73,386,826...73,391,991 		JBrowse link
G CRABP1 cellular retinoic acid binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,269,794...57,277,697
Ensembl chr15:76,234,401...76,242,311 		JBrowse link
G CRTC3 CREB regulated transcription coactivator 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:69,217,679...69,333,897
Ensembl chr15:88,427,468...88,533,593 		JBrowse link
G CSF1R colony stimulating factor 1 receptor exacerbates ISO protein:decreased expression:colorectum (human) RGD PMID:32118593 RGD:150524285 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415 		JBrowse link
G CSK C-terminal Src kinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,724,814...53,745,710
Ensembl chr15:73,342,703...73,363,476 		JBrowse link
G CSNK1G1 casein kinase 1 gamma 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,117,845...43,302,134
Ensembl chr15:61,410,414...61,594,180 		JBrowse link
G CSPG4 chondroitin sulfate proteoglycan 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,583,010...54,621,240
Ensembl chr15:74,177,909...74,200,498 		JBrowse link
G CTDSPL2 CTD small phosphatase like 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:23,384,416...23,483,508
Ensembl chr15:41,554,276...41,654,736 		JBrowse link
G CTNNA1 catenin alpha 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:28492532 PMID:32051609 PMID:34425242 NCBI chr 5:134,134,944...134,313,239
Ensembl chr 5:140,261,883...140,438,547 		JBrowse link
G CTNNB1 catenin beta 1 treatment
disease_progression		 ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
Human cells in mouse model
protein:increased expression:cytoplasm, nucleus		 OMIM
ClinVar
RGD		 PMID:17893236 PMID:23033978 PMID:24614104 PMID:25326669 PMID:25741868 More... RGD:153297782 RGD:2289840 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G CTNNBL1 catenin beta like 1 ISO DNA:snps:introns: c.326+4380A>G, c.1213+1838T>C, c.1393-7258G>A (rs2344481, rs2281148, rs2235460) (human) RGD PMID:21537400 RGD:9850254 NCBI chr20:34,015,883...34,192,958
Ensembl chr20:35,129,836...35,306,836 		JBrowse link
G CTPS2 CTP synthase 2 resistance ISO mRNA:increased expression:tumor (human) RGD PMID:21378502 RGD:5132879 NCBI chr  X:9,209,727...9,332,641
Ensembl chr  X:16,579,409...16,693,184 		JBrowse link
G CTSH cathepsin H ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,893,379...57,917,194
Ensembl chr15:76,852,668...76,876,976 		JBrowse link
G CTXN2 cortexin 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:27,127,250...27,152,785
Ensembl chr15:45,474,588...45,474,833 		JBrowse link
G CUX1 cut like homeobox 1 exacerbates ISO mRNA:increased expression:colorectum (human) RGD PMID:33014778 RGD:152985540 NCBI chr 7:93,954,599...94,432,697
Ensembl chr 7:107,191,124...107,609,940 		JBrowse link
G CXCL5 C-X-C motif chemokine ligand 5 disease_progression ISO mRNA:increased expression:colon (human) RGD PMID:18413816 PMID:33717244 RGD:152999433 RGD:5135268 NCBI chr 4:50,192,665...50,195,642
Ensembl chr 4:56,024,848...56,027,989 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 severity
ameliorates
exacerbates
disease_progression		 ISO mRNA:increased expression:colonic epithelium (human)
mRNA:increased expression:colon (human)
human cells in mouse model
mRNA,protein:increased expression:colon (human)
mRNA:increased expression:colorectum (human)
protein:increased expression:blood serum (human)
protein:increased expression:colorectum (human)
human cells in mouse model; protein:increased expression:colorectum (human)		 RGD PMID:15837989 PMID:27330310 PMID:28515923 PMID:28739729 PMID:29481800 More... RGD:151665323 RGD:151665332 RGD:151708720 RGD:151708721 RGD:151708726 RGD:151709000 RGD:151893497 RGD:151893498 RGD:152023657 NCBI chr2B:23,744,271...23,748,106
Ensembl chr2B:140,181,829...140,189,647 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164 		JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:30,152,924...30,282,854
Ensembl chr15:48,486,688...48,521,554 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,664,968...53,672,277
Ensembl chr15:73,284,566...73,290,636 		JBrowse link
G CYP1A2 cytochrome P450 family 1 subfamily A member 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,692,877...53,699,279
Ensembl chr15:73,311,720...73,319,447 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 sexual_dimorphism
susceptibility
disease_progression
severity		 ISO mRNA:splice variants:colorectal mucosa (human)
DNA:SNP:enhancer: (rs6013897) (human)
mRNA:increased expression:colon (human)
DNA:missense mutation:CDS: (rs6022990) (human)
circRNA:increased expression:colorectum (human)
DNA:SNP:intron: (rs2765934) (human)
mRNA:increased expression:colorectum (human)
DNA:SNP:intron: (rs4809960) (human)
mRNA:increased expression:colorectal mucosa (human)		 RGD PMID:20398751 PMID:23463632 PMID:24213465 PMID:24562971 PMID:26260259 More... RGD:11526316 RGD:151361180 RGD:151361186 RGD:151665172 RGD:151665178 RGD:151665339 RGD:151665496 RGD:151665501 RGD:151665788 RGD:151708714 NCBI chr20:50,500,103...50,520,487
Ensembl chr20:51,721,685...51,742,716 		JBrowse link
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 ISO DNA:SNP:rs3813867 (human) RGD PMID:30489355 RGD:14700897 Ensembl chr10:134,839,025...134,852,719 JBrowse link
G DAB2IP DAB2 interacting protein disease_progression
treatment		 ISO protein:decreased expression:colorectum (human)
human cells in mouse model		 RGD PMID:26564738 PMID:30974224 PMID:31081086 RGD:11556182 RGD:151665164 RGD:151665166 NCBI chr 9:92,696,798...92,912,425
Ensembl chr 9:121,143,457...121,254,336 		JBrowse link
G DAPK2 death associated protein kinase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:42,860,484...42,999,489
Ensembl chr15:61,152,553...61,284,990 		JBrowse link
G DCC DCC netrin 1 receptor ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm OMIM
ClinVar		 PMID:25741868 PMID:28492532 NCBI chr18:45,717,924...46,913,998
Ensembl chr18:49,268,812...50,255,155 		JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 severity ISO mRNA:increased expression:colon (mouse)
protein:increased expression, increased phosphorylation:tumor cells (human)		 RGD PMID:29438985 PMID:30666650 RGD:151347685 RGD:151347840 NCBI chr 6:30,625,871...30,645,066
Ensembl chr 6:31,496,047...31,513,455 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 disease_progression ISO RGD PMID:28476831 RGD:150429706 NCBI chr 1:138,048,730...138,200,426
Ensembl chr 1:141,932,158...141,990,766 		JBrowse link
G DDX3X DEAD-box helicase 3 X-linked ameliorates
exacerbates
treatment		 ISO human cells in mouse model
protein:increased expression:colorectum, nucleus (human)
protein:increased expression:colorectum (human)		 RGD PMID:26087195 PMID:26892600 PMID:27007150 PMID:28761359 PMID:31391454 RGD:11096798 RGD:151356502 RGD:151356503 RGD:151356505 RGD:151356658 NCBI chr  X:33,780,381...33,796,829
Ensembl chr  X:41,475,116...41,505,837 		JBrowse link
G DDX51 DEAD-box helicase 51 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr12:129,797,708...129,803,006
Ensembl chr12:134,225,416...134,234,202 		JBrowse link
G DENND4A DENN domain containing 4A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,600,897...44,734,150
Ensembl chr15:62,882,496...63,012,979 		JBrowse link
G DET1 DET1 partner of COP1 E3 ubiquitin ligase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:67,203,101...67,238,185
Ensembl chr15:86,411,937...86,444,789 		JBrowse link
G DICER1 dicer 1, ribonuclease III susceptibility
disease_progression		 ISO DNA:SNP: :rs3742330 A>G (human) RGD PMID:24649159 PMID:30833603 RGD:149735326 RGD:149735345 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940 		JBrowse link
G DIS3L DIS3 like exosome 3'-5' exoribonuclease ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:45,246,867...45,287,521
Ensembl chr15:63,523,512...63,563,813 		JBrowse link
G DISP2 dispatched RND transporter family member 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,292,340...19,305,143
Ensembl chr15:37,548,049...37,559,623 		JBrowse link
G DLC1 DLC1 Rho GTPase activating protein ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm OMIM
ClinVar		 PMID:9536098 PMID:17576681 PMID:24587289 PMID:25741868 PMID:28106320 More... NCBI chr 8:12,282,190...12,809,770
Ensembl chr 8:9,037,742...9,460,233 		JBrowse link
G DLL4 delta like canonical Notch ligand 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,871,584...19,881,817
Ensembl chr15:38,121,574...38,129,471 		JBrowse link
G DMD dystrophin ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr  X:23,728,650...26,338,849
Ensembl chr  X:31,282,415...33,492,733 		JBrowse link
G DMXL2 Dmx like 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:30,386,009...30,557,976
Ensembl chr15:48,719,150...48,890,708 		JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:34,382,064...34,469,432
Ensembl chr15:52,711,349...52,791,281 		JBrowse link
G DNAJA4 DnaJ heat shock protein family (Hsp40) member A4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,193,545...57,211,518
Ensembl chr15:76,158,155...76,176,089 		JBrowse link
G DNAJC17 DnaJ heat shock protein family (Hsp40) member C17 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,708,842...19,748,136
Ensembl chr15:37,960,965...37,999,674 		JBrowse link
G DPH6 diphthamine biosynthesis 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:14,293,746...14,469,331
Ensembl chr15:32,554,276...32,729,455 		JBrowse link
G DPP8 dipeptidyl peptidase 8 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,385,877...44,461,092
Ensembl chr15:62,666,088...62,740,504 		JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO protein:increased activity:liver RGD PMID:23197286 RGD:11251746 NCBI chr 1:99,736,145...100,576,663
Ensembl chr 1:98,457,934...99,300,100 		JBrowse link
G DSN1 DSN1 component of MIS12 kinetochore complex disease_progression ISO RGD PMID:27329586 RGD:27372885 NCBI chr20:33,083,222...33,105,563
Ensembl chr20:34,202,053...34,223,729 		JBrowse link
G DTWD1 DTW domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:28,578,698...28,602,840
Ensembl chr15:46,902,304...46,926,401 		JBrowse link
G DUOX1 dual oxidase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,077,557...24,113,206
Ensembl chr15:42,431,595...42,467,943 		JBrowse link
G DUOX2 dual oxidase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,040,513...24,061,758
Ensembl chr15:42,395,135...42,414,281 		JBrowse link
G DUOXA1 dual oxidase maturation factor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,064,967...24,077,641
Ensembl chr15:42,418,234...42,430,749 		JBrowse link
G DUOXA2 dual oxidase maturation factor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,061,922...24,066,016
Ensembl chr15:42,415,195...42,418,974 		JBrowse link
G DUT deoxyuridine triphosphatase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:27,280,025...27,292,003
Ensembl chr15:45,603,807...45,616,022 		JBrowse link
G EDC3 enhancer of mRNA decapping 3 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr15:53,577,101...53,642,504
Ensembl chr15:73,196,823...73,262,214 		JBrowse link
G EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 ISO protein:decreased expression:colorectum: RGD PMID:21789020 RGD:10401218 NCBI chr 6:7,911,807...7,940,918
Ensembl chr 6:8,192,997...8,222,056 		JBrowse link
G EEF2 eukaryotic translation elongation factor 2 ISO protein:increased expression:colon (human) RGD PMID:24589652 RGD:153297816 NCBI chr19:3,000,608...3,009,918
Ensembl chr19:3,950,772...3,960,172 		JBrowse link
G EFL1 elongation factor like GTPase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:61,111,244...61,243,724 JBrowse link
G EGFR epidermal growth factor receptor resistance ISO human tumor in mouse model
mRNA, protein:increased expression (human)		 RGD PMID:15269313 PMID:20010090 PMID:21398618 RGD:5131455 RGD:5131632 RGD:5131871 NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615 		JBrowse link
G EHD4 EH domain containing 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,840,517...20,926,900
Ensembl chr15:39,010,302...39,086,713 		JBrowse link
G EID1 EP300 interacting inhibitor of differentiation 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:27,827,790...27,829,493 JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211 		JBrowse link
G EIF3J eukaryotic translation initiation factor 3 subunit J ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:23,493,363...23,518,705 JBrowse link
G EIF5A eukaryotic translation initiation factor 5A disease_progression ISO RGD PMID:23322277 RGD:151356994 NCBI chr17:7,341,076...7,346,570
Ensembl chr17:7,327,363...7,333,270 		JBrowse link
G ELL3 elongation factor for RNA polymerase II 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,732,742...22,737,522
Ensembl chr15:40,821,759...40,827,070 		JBrowse link
G EMC4 ER membrane protein complex subunit 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,734,031...12,739,345
Ensembl chr15:31,568,622...31,573,547 		JBrowse link
G EMC7 ER membrane protein complex subunit 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,593,498...12,611,409
Ensembl chr15:31,428,591...31,446,290 		JBrowse link
G EMX2 empty spiracles homeobox 2 ameliorates ISO human cells in mouse model RGD PMID:27712600 RGD:153323291 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G EP300 E1A binding protein p300 ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm		 OMIM
ClinVar		 PMID:15706485 PMID:18414213 PMID:24476420 PMID:24728327 PMID:25741868 More... NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G EPB42 erythrocyte membrane protein band 4.2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,157,831...22,183,254
Ensembl chr15:40,313,462...40,337,458 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr17:17,560,337...17,600,808
Ensembl chr17:17,777,434...17,805,862 		JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 susceptibility ISO DNA:polymorphism:promoter:-782G>T (human) RGD PMID:18094435 RGD:2289977 NCBI chr2B:98,625,630...99,795,371
Ensembl chr2B:217,069,644...218,272,006 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit sexual_dimorphism ISO DNA:SNP:3'utr: (rs3212986) (human)
mRNA:increased expression:colorectum (human)
DNA:SNP:exon: (rs3212986) (human)		 RGD PMID:16951227 PMID:29151331 PMID:29516665 RGD:153344543 RGD:155260343 RGD:155260348 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO mRNA:increased expression:colorectum (human) RGD PMID:16951227 RGD:155260343 NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO mRNA:increased expression:colorectum (human) RGD PMID:16951227 RGD:155260343 NCBI chr2B:32,983,492...33,020,492
Ensembl chr2B:127,922,483...127,959,372 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit ISO mRNA:increased expression:colorectum (human) RGD PMID:16951227 RGD:155260343 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor susceptibility ISO DNA:SNP:exon: (rs2228526) (human)
DNA:missense mutation:CDS:p.R1213G (human)
mRNA:increased expression:colorectum (human)		 RGD PMID:16951227 PMID:17119055 PMID:29151331 RGD:155260340 RGD:155260343 RGD:155260348 NCBI chr10:44,703,720...44,784,948 JBrowse link
G ERCC6L ERCC excision repair 6 like, spindle assembly checkpoint helicase exacerbates ISO mRNA, protein:increased expression:colorectum (human) RGD PMID:31289493 RGD:155598681 NCBI chr  X:61,441,350...61,476,267
Ensembl chr  X:71,526,160...71,560,091 		JBrowse link
G ESR2 estrogen receptor 2 susceptibility ISO DNA:repeat:3' utr:g.dupCA (human) RGD PMID:21884200 RGD:7364791 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G ETFA electron transfer flavoprotein subunit alpha ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:55,128,686...55,227,369
Ensembl chr15:74,720,198...74,818,494 		JBrowse link
G EXD1 exonuclease 3'-5' domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,124,681...20,172,875
Ensembl chr15:38,373,481...38,418,179 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit disease_progression
no_association		 ISO DNA:SNPs: :rs2302427, rs41277434, rs6958683 (human)
DNA:SNP: :rs3757441 (human)		 RGD PMID:21539681 PMID:21926398 PMID:26871294 RGD:126779590 RGD:126779594 RGD:126781700 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726 		JBrowse link
G F7 coagulation factor VII ISO human protein in a rat model RGD PMID:19062044 RGD:11049532 NCBI chr13:94,246,694...94,261,133
Ensembl chr13:113,315,868...113,329,995 		JBrowse link
G FAH fumarylacetoacetate hydrolase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:59,121,657...59,155,229
Ensembl chr15:78,048,571...78,115,098 		JBrowse link
G FAM219B family with sequence similarity 219 member B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,840,510...53,847,389
Ensembl chr15:73,457,762...73,464,661 		JBrowse link
G FAM227B family with sequence similarity 227 member B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:28,454,626...28,578,566
Ensembl chr15:46,614,922...46,896,481 		JBrowse link
G FAM81A family with sequence similarity 81 member A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:38,408,682...38,493,751
Ensembl chr15:56,716,721...56,799,249 		JBrowse link
G FAM98B family with sequence similarity 98 member B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:17,383,298...17,415,682 JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr15:9,395,348...9,435,434
Ensembl chr15:28,433,749...28,473,211 		JBrowse link
G FANCI FA complementation group I ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:25741868 PMID:28492532 NCBI chr15:67,935,882...68,009,033
Ensembl chr15:87,142,871...87,215,271 		JBrowse link
G FASN fatty acid synthase ISO mRNA,protein:increased expression:colorectum: RGD PMID:32525817 RGD:153350127 NCBI chr17:76,483,108...76,503,148
Ensembl chr17:82,187,516...82,205,647 		JBrowse link
G FAT1 FAT atypical cadherin 1 sexual_dimorphism ISO left-sided colorectal cancer;DNA:mutations:multiple (human) RGD PMID:33106877 RGD:150539450 NCBI chr 4:178,752,261...178,895,038
Ensembl chr 4:190,952,737...191,093,357 		JBrowse link
G FBN1 fibrillin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:27,358,780...27,593,539
Ensembl chr15:45,682,450...45,918,111 		JBrowse link
G FBRSL1 fibrosin like 1 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr12:129,837,013...129,936,801 JBrowse link
G FBXL22 F-box and leucine rich repeat protein 22 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:42,543,909...42,548,938
Ensembl chr15:60,837,032...60,841,829 		JBrowse link
G FBXO22 F-box protein 22 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,817,076...54,849,271
Ensembl chr15:74,410,213...74,441,609 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar NCBI chr 4:144,660,676...144,874,404
Ensembl chr 4:156,312,274...156,402,351 		JBrowse link
G FEM1B fem-1 homolog B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:47,236,920...47,254,878
Ensembl chr15:66,005,614...66,024,007 		JBrowse link
G FGF7 fibroblast growth factor 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:28,378,339...28,442,800
Ensembl chr15:46,702,119...46,770,163 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm OMIM
ClinVar		 PMID:7647778 PMID:8723106 PMID:8841188 PMID:9042914 PMID:9107244 More... NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 ISO protein:increased expression:colorectum (human) RGD PMID:24503538 RGD:150520155 NCBI chr 5:172,386,443...172,400,271
Ensembl chr 5:179,454,995...179,467,605 		JBrowse link
G FLCN folliculin ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm		 OMIM
ClinVar		 PMID:9536098 PMID:12204536 PMID:12471204 PMID:12843323 PMID:15852235 More... NCBI chr17:34,057,127...34,081,637
Ensembl chr17:38,988,518...39,013,160 		JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:11807987 PMID:25741868 PMID:28492532 NCBI chr 5:175,804,728...175,852,703
Ensembl chr 5:183,115,856...183,149,006 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO MRNA, protein:increased expression:colon (human)
mRNA:increased expression:colon (human)		 RGD PMID:30114390 PMID:35034245 RGD:153344553 RGD:153344554 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397 		JBrowse link
G FOXA1 forkhead box A1 disease_progression ISO RGD PMID:27484093 PMID:31081047 RGD:151665746 RGD:151665754 NCBI chr14:18,347,284...18,352,705 JBrowse link
G FOXB1 forkhead box B1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
G FOXP3 forkhead box P3 ISO DNA:hypomethylation:colorectum RGD PMID:24291052 RGD:38599002 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G FRMD5 FERM domain containing 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,830,850...23,161,693
Ensembl chr15:40,919,053...41,250,981 		JBrowse link
G FSD2 fibronectin type III and SPRY domain containing 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:62,790,477...62,842,838
Ensembl chr15:80,657,013...80,684,790 		JBrowse link
G FSIP1 fibrous sheath interacting protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:18,540,424...18,722,868 JBrowse link
G FZD3 frizzled class receptor 3 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 8:27,773,699...27,853,980
Ensembl chr 8:24,973,644...25,042,115 		JBrowse link
G GABPB1 GA binding protein transcription factor subunit beta 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:29,223,588...29,303,863
Ensembl chr15:47,547,202...47,600,234 		JBrowse link
G GAD1 glutamate decarboxylase 1 severity ISO mRNA:increased expression:colon (human) RGD PMID:26549033 RGD:151356759 NCBI chr2B:58,100,623...58,145,045
Ensembl chr2B:175,558,538...175,602,944 		JBrowse link
G GALK2 galactokinase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:28,103,719...28,278,718
Ensembl chr15:46,440,759...46,600,440 		JBrowse link
G GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer		 OMIM
ClinVar		 PMID:9536098 PMID:16199547 PMID:17576681 PMID:19617566 PMID:22461326 More... NCBI chr 9:69,897,793...69,940,252
Ensembl chr 9:98,017,161...98,058,135 		JBrowse link
G GATA1 GATA binding protein 1 disease_progression ISO RGD PMID:31069596 RGD:149735196 NCBI chr  X:41,088,724...41,092,190
Ensembl chr  X:48,945,394...48,953,126 		JBrowse link
G GATM glycine amidinotransferase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,309,045...24,326,673
Ensembl chr15:42,639,597...42,657,209 		JBrowse link
G GCHFR GTP cyclohydrolase I feedback regulator ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,704,891...19,708,686
Ensembl chr15:37,957,109...37,960,973 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO mRNA:increased expression:colon: RGD PMID:8705999 RGD:11049536 NCBI chr 6:53,052,145...53,102,794
Ensembl chr 6:54,687,315...54,734,994 		JBrowse link
G GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:38,580,509...38,589,223
Ensembl chr15:56,892,716...56,894,032 		JBrowse link
G GDPGP1 GDP-D-glucose phosphorylase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,923,301...68,931,353
Ensembl chr15:88,132,147...88,133,304 		JBrowse link
G GJD2 gap junction protein delta 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:13,668,639...13,672,691
Ensembl chr15:31,928,157...31,931,474 		JBrowse link
G GLCE glucuronic acid epimerase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:48,110,725...48,222,251
Ensembl chr15:66,979,271...66,995,646 		JBrowse link
G GLDN gliomedin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:30,285,743...30,352,403
Ensembl chr15:48,619,452...48,685,616 		JBrowse link
G GLI1 GLI family zinc finger 1 ISO RGD PMID:22901214 RGD:150520174 NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473 		JBrowse link
G GNB5 G protein subunit beta 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:31,061,310...31,122,427
Ensembl chr15:49,388,026...49,452,123 		JBrowse link
G GOLGA6B golgin A6 family member B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,553,289...51,584,844 JBrowse link
G GOLM2 golgi membrane protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:23,248,227...23,372,928
Ensembl chr15:41,418,910...41,542,748 		JBrowse link
G GPR176 G protein-coupled receptor 176 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:18,739,092...18,858,618
Ensembl chr15:36,995,149...37,007,073 		JBrowse link
G GPX1 glutathione peroxidase 1 susceptibility ISO DNA:missense mutation:CDS:p.P198L (human)
mRNA:decreased expression:colorectum (human)		 RGD PMID:19428376 PMID:25550558 RGD:152023636 RGD:152023662 NCBI chr 3:49,280,038...49,281,455
Ensembl chr 3:50,360,947...50,361,826 		JBrowse link
G GPX2 glutathione peroxidase 2 disease_progression ISO protein:increased expression:large intestine (human) RGD PMID:18479189 RGD:152998902 NCBI chr14:45,522,558...45,526,678 JBrowse link
G GPX4 glutathione peroxidase 4 susceptibility ISO DNA:silent mutation:CDS: (rs713041) (human) RGD PMID:20378690 RGD:152995451 NCBI chr19:20,904...23,828 JBrowse link
G GRAMD2A GRAM domain containing 2A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,111,249...51,148,379
Ensembl chr15:69,874,593...69,912,241 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:22561515 PMID:25741868 PMID:25992589 PMID:26493165 PMID:26947005 More... NCBI chr15:11,213,870...11,230,619 JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A sexual_dimorphism ISO right-sided colorectal cancer;DNA:mutations:multiple (human)
DNA:hypermethylation:promoter (human)		 RGD PMID:17922030 PMID:33106877 RGD:150539450 RGD:150539451 NCBI chr16:8,682,169...9,105,581
Ensembl chr16:9,919,143...10,336,167 		JBrowse link
G GRP gastrin releasing peptide ISO protein:increased expression:serum (human) RGD PMID:30146822 RGD:401700396 NCBI chr18:52,614,169...52,626,427
Ensembl chr18:55,942,263...55,953,188 		JBrowse link
G GSTM1 glutathione S-transferase mu 1 disease_progression
no_association		 ISO DNA:CNVs
DNA:deletion		 RGD PMID:10445390 PMID:22234881 PMID:26406947 PMID:27893202 RGD:11353274 RGD:14700954 RGD:14700958 RGD:14700961 Ensembl chr 1:127,979,238...128,010,411 JBrowse link
G GTF2A2 general transcription factor IIA subunit 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:38,608,360...38,627,156
Ensembl chr15:56,913,452...56,932,052 		JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,473,542...44,520,885
Ensembl chr15:62,752,762...62,799,950 		JBrowse link
G HAPLN3 hyaluronan and proteoglycan link protein 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:67,565,957...67,584,352
Ensembl chr15:86,773,882...86,792,120 		JBrowse link
G HAUS2 HAUS augmin like complex subunit 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,510,173...21,531,733
Ensembl chr15:39,666,043...39,683,322 		JBrowse link
G HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:52,231,906...52,285,220
Ensembl chr15:70,997,020...71,042,285 		JBrowse link
G HDAC1 histone deacetylase 1 ISO mRNA:increased expression:colon: RGD PMID:23724067 RGD:9590193 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410 		JBrowse link
G HDAC3 histone deacetylase 3 ISO mRNA:increased expression:colon: RGD PMID:23724067 RGD:9590193 NCBI chr 5:136,981,790...136,997,786
Ensembl chr 5:143,094,406...143,110,322 		JBrowse link
G HDAC5 histone deacetylase 5 ISO mRNA:increased expression:colon: RGD PMID:23724067 RGD:9590193 NCBI chr17:13,273,052...13,319,695
Ensembl chr17:13,446,836...13,479,140 		JBrowse link
G HDAC7 histone deacetylase 7 ISO mRNA:increased expression:colon: RGD PMID:23724067 RGD:9590193 NCBI chr12:40,913,301...40,950,542
Ensembl chr12:41,789,367...41,825,123 		JBrowse link
G HDC histidine decarboxylase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:29,188,296...29,212,327
Ensembl chr15:47,510,629...47,534,577 		JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:42,555,131...42,785,228
Ensembl chr15:60,848,493...61,017,244 		JBrowse link
G HEXA hexosaminidase subunit alpha ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,235,123...51,326,832
Ensembl chr15:70,057,943...70,090,688
Ensembl chr15:70,057,943...70,090,688 		JBrowse link
G HFE homeostatic iron regulator susceptibility ISO DNA:missense mutation, haplotype:cds:p.C282Y (human) RGD PMID:10383894 RGD:8694350 NCBI chr 6:25,921,663...25,930,852
Ensembl chr 6:26,580,358...26,588,591 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ameliorates ISO human cells in mouse model RGD PMID:30789971 RGD:151893289 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885 		JBrowse link
G HILPDA hypoxia inducible lipid droplet associated disease_progression ISO mRNA:increased expression:colon (human)
human cells in mouse model		 RGD PMID:23916472 RGD:153344575 NCBI chr 7:120,446,572...120,449,174
Ensembl chr 7:133,100,523...133,100,714 		JBrowse link
G HK1 hexokinase 1 ISO RGD PMID:19877886 RGD:11353883 NCBI chr10:65,786,940...65,870,204
Ensembl chr10:68,289,288...68,401,045 		JBrowse link
G HMG20A high mobility group 20A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:56,348,298...56,413,106
Ensembl chr15:72,137,714...72,202,149 		JBrowse link
G HNF1A HNF1 homeobox A treatment ISO RNA:increased expression:colon (human)
DNA:SNPs:multiple (human)		 RGD PMID:27433921 PMID:29066969 RGD:150540313 RGD:150540315 NCBI chr12:118,562,308...118,584,596
Ensembl chr12:121,932,671...121,955,911 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K severity ISO protein:increased expression:colonic epithelium, cytoplasm (human) RGD PMID:21194727 RGD:9999439 NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U ISO protein:decreased expression:colonic epithelium, nucleus (human) RGD PMID:21194727 RGD:9999439 NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031 		JBrowse link
G HOMER2 homer scaffold protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:62,617,905...62,762,903
Ensembl chr15:80,737,570...80,784,729 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 disease_progression ISO protein: increased expression: serum RGD PMID:19578980 RGD:6480104 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773 		JBrowse link
G HTRA1 HtrA serine peptidase 1 exacerbates ISO protein:decreased expression:colonic epithelium,colonic mucosa (human)
mRNA, protein:increased expression,decreased expression:colorectal mucosa (human)		 RGD PMID:28586045 PMID:32486357 RGD:152977762 RGD:152985530 NCBI chr10:119,030,409...119,083,682
Ensembl chr10:122,441,098...122,494,733 		JBrowse link
G HTRA2 HtrA serine peptidase 2 exacerbates ISO protein:decreased expression:colorectal mucosa (human) RGD PMID:32486357 RGD:152977762 NCBI chr2A:74,596,020...74,599,790
Ensembl chr2A:76,102,240...76,106,152 		JBrowse link
G HYKK hydroxylysine kinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,435,833...57,465,557
Ensembl chr15:76,400,131...76,428,844 		JBrowse link
G HYPK huntingtin interacting protein K ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,760,593...22,762,059
Ensembl chr15:40,850,849...40,852,835 		JBrowse link
G ICE2 interactor of little elongation complex ELL subunit 2 ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:28492532 NCBI chr15:39,393,556...39,452,395
Ensembl chr15:57,695,137...57,754,285 		JBrowse link
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,771,050...68,790,523
Ensembl chr15:87,972,889...87,991,276 		JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,078,588...57,099,934
Ensembl chr15:76,043,311...76,064,634 		JBrowse link
G IER2 immediate early response 2 ISO DNA:hypomethylation:promoter (human) RGD PMID:34311674 RGD:153323328 NCBI chr19:12,714,804...12,718,213
Ensembl chr19:13,452,239...13,452,910 		JBrowse link
G IGDCC3 immunoglobulin superfamily DCC subclass member 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,272,875...44,324,328
Ensembl chr15:62,554,128...62,604,748 		JBrowse link
G IGDCC4 immunoglobulin superfamily DCC subclass member 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,327,428...44,369,024
Ensembl chr15:62,608,243...62,642,881 		JBrowse link
G IGF2 insulin like growth factor 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr11:2,170,190...2,199,442
Ensembl chr11:2,202,743...2,228,890 		JBrowse link
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma ISO RGD PMID:28502111 RGD:153305906 NCBI chr  X:143,988,720...144,010,078
Ensembl chr  X:153,854,493...153,876,092 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 disease_progression
exacerbates
susceptibility
severity		 ISO DNA:hypermethylation: (human)
DNA:SNP:3' utr: (rs6964823) (human)
DNA:hypermethylation:promoter (human)
DNA:polymorphisms: (human)		 RGD PMID:21737484 PMID:25928810 PMID:27726312 PMID:29780264 PMID:29796114 More... RGD:150540317 RGD:150540318 RGD:150540319 RGD:150540320 RGD:150540321 RGD:150540322 RGD:150540323 RGD:150540325 RGD:150540327 RGD:150540328 RGD:150540329 RGD:151347633 NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245 		JBrowse link
G IL16 interleukin 16 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:60,181,827...60,299,406
Ensembl chr15:79,122,988...79,250,861 		JBrowse link
G IL6 interleukin 6 ISO DNA:SNP:promoter:-174G>C (human) RGD PMID:28349833 RGD:14975287 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G IMP3 IMP U3 small nucleolar ribonucleoprotein 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,547,455...54,548,633
Ensembl chr15:74,141,156...74,141,710 		JBrowse link
G INO80 INO80 complex ATPase subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G INSYN1 inhibitory synaptic factor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:52,650,196...52,663,270
Ensembl chr15:71,405,502...71,418,269 		JBrowse link
G INTS14 integrator complex subunit 14 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,521,277...44,552,780
Ensembl chr15:62,800,351...62,831,946 		JBrowse link
G IQCH IQ motif containing H ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:46,206,780...46,457,549
Ensembl chr15:64,477,650...64,720,706 		JBrowse link
G IQGAP1 IQ motif containing GTPase activating protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:69,076,025...69,190,082
Ensembl chr15:88,276,851...88,388,594 		JBrowse link
G IREB2 iron responsive element binding protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,367,314...57,430,322
Ensembl chr15:76,331,610...76,394,476 		JBrowse link
G IRS4 insulin receptor substrate 4 disease_progression ISO protein:increased expression:colorectum (human)
protein:increased expression:colorectal mucosa (human)		 RGD PMID:29185229 PMID:29353348 PMID:30410539 RGD:151347867 RGD:151347868 RGD:151347869 NCBI chr  X:97,818,895...97,835,986
Ensembl chr  X:108,202,208...108,205,821 		JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:67,328,334...67,345,085
Ensembl chr15:86,536,647...86,553,751 		JBrowse link
G ISL2 ISL LIM homeobox 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:55,250,837...55,257,775
Ensembl chr15:74,843,797...74,848,635 		JBrowse link
G ISLR immunoglobulin superfamily containing leucine rich repeat ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,112,206...53,115,367
Ensembl chr15:72,736,331...72,737,617 		JBrowse link
G ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:28492532 NCBI chr15:53,066,685...53,075,324 JBrowse link
G ITGA11 integrin subunit alpha 11 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:47,260,931...47,390,062
Ensembl chr15:66,031,201...66,128,985 		JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,434,532...20,444,389
Ensembl chr15:38,675,600...38,684,779 		JBrowse link
G ITPKC inositol-trisphosphate 3-kinase C susceptibility ISO DNA:SNP:intron: (rs2607420) (human) RGD PMID:33470690 RGD:152995405 NCBI chr19:37,761,221...37,785,118
Ensembl chr19:46,267,754...46,290,935 		JBrowse link
G IVD isovaleryl-CoA dehydrogenase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,342,283...19,372,465
Ensembl chr15:37,596,688...37,609,902 		JBrowse link
G JAK1 Janus kinase 1 disease_progression
severity		 ISO DNA:frameshift mutations RGD PMID:28539123 PMID:29121062 RGD:150524355 RGD:18936998 NCBI chr 1:64,083,562...64,315,909
Ensembl chr 1:65,973,904...66,024,991 		JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit ISO associated with ulcerative colitis;protein:increased expression:colonic mucosa (human) RGD PMID:33299340 RGD:151347858 NCBI chr19:12,353,760...12,355,598
Ensembl chr19:13,097,931...13,098,974 		JBrowse link
G KATNBL1 katanin regulatory subunit B1 like 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,650,139...12,719,655
Ensembl chr15:31,484,885...31,554,402 		JBrowse link
G KBTBD13 kelch repeat and BTB domain containing 13 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,016,331...44,019,797
Ensembl chr15:62,300,878...62,302,254 		JBrowse link
G KCNB2 potassium voltage-gated channel subfamily B member 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 8:69,069,427...69,481,855
Ensembl chr 8:70,756,185...71,122,897 		JBrowse link
G KDM3B lysine demethylase 3B severity ISO protein:decreased expression:colon mucosa (human) RGD PMID:22345654 RGD:9586735 NCBI chr 5:133,732,400...133,816,988
Ensembl chr 5:139,863,922...139,947,895 		JBrowse link
G KDM4B lysine demethylase 4B treatment ISO human gene in a mouse model RGD PMID:24473398 RGD:9587755 NCBI chr19:3,986,296...4,172,359
Ensembl chr19:4,977,413...5,116,113 		JBrowse link
G KDM5C lysine demethylase 5C ISO mRNA:increased expression:colorectum (human) RGD PMID:32552762 RGD:151361177 NCBI chr  X:45,377,609...45,440,025
Ensembl chr  X:53,515,886...53,548,785 		JBrowse link
G KDM6A lysine demethylase 6A ameliorates ISO human cells in a mouse model RGD PMID:31139021 RGD:150429740 NCBI chr  X:37,313,000...37,548,630
Ensembl chr  X:45,127,382...45,362,029 		JBrowse link
G KDR kinase insert domain receptor no_association
treatment		 ISO DNA:SNPs:exons:rs1870377, rs2305948 (human)
DNA:SNPs:promoter:rs10013228, rs2071559 (human)		 RGD PMID:22182247 RGD:126848807 NCBI chr 4:68,813,894...68,861,018
Ensembl chr 4:75,377,375...75,427,109 		JBrowse link
G KIF18A kinesin family member 18A disease_progression ISO RGD PMID:21213216 RGD:11554203 NCBI chr11:27,989,506...28,076,078
Ensembl chr11:27,888,435...27,976,429 		JBrowse link
G KIF23 kinesin family member 23 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:48,364,891...48,399,038
Ensembl chr15:67,135,401...67,169,531 		JBrowse link
G KIF2C kinesin family member 2C disease_progression ISO RGD PMID:18506187 RGD:27372891 NCBI chr 1:44,042,565...44,070,922
Ensembl chr 1:45,408,734...45,436,844 		JBrowse link
G KIF7 kinesin family member 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,312,064...68,349,864
Ensembl chr15:87,529,290...87,553,445 		JBrowse link
G KLF13 KLF transcription factor 13 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr15:9,818,294...9,964,912 JBrowse link
G KLHL25 kelch like family member 25 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:64,448,130...64,486,254
Ensembl chr15:83,670,090...83,671,859 		JBrowse link
G KNL1 kinetochore scaffold 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,539,264...19,609,593
Ensembl chr15:37,801,705...37,860,858 		JBrowse link
G KNSTRN kinetochore localized astrin (SPAG5) binding protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,316,854...19,328,425 JBrowse link
G KRAS KRAS proto-oncogene, GTPase disease_progression ISO DNA:missense mutations:cds:p.GLY12ASP,GLY12Val,GLY13ALA,GLY13ASP(human) RGD PMID:22971512 RGD:14398748 NCBI chr12:61,062,689...61,108,524
Ensembl chr12:63,679,293...63,724,335 		JBrowse link
G KRT20 keratin 20 disease_progression ISO RGD PMID:23322277 RGD:151356994 NCBI chr17:16,396,544...16,408,104
Ensembl chr17:16,624,068...16,633,359 		JBrowse link
G L1CAM L1 cell adhesion molecule severity ISO protein:increased expression:colon (human) RGD PMID:17873897 RGD:6483011 NCBI chr  X:143,412,303...143,437,090
Ensembl chr  X:153,298,690...153,324,228 		JBrowse link
G LACTB lactamase beta ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:42,069,069...42,089,329
Ensembl chr15:60,365,427...60,385,179 		JBrowse link
G LARP6 La ribonucleoprotein 6, translational regulator ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:49,781,184...49,803,856
Ensembl chr15:68,547,937...68,552,899 		JBrowse link
G LATS2 large tumor suppressor kinase 2 treatment ISO Human cells in mouse model RGD PMID:32682784 RGD:153297782 NCBI chr13:2,300,625...2,389,027
Ensembl chr13:20,611,861...20,683,083 		JBrowse link
G LCMT2 leucine carboxyl methyltransferase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,288,992...22,291,814
Ensembl chr15:40,444,633...40,446,693 		JBrowse link
G LCTL lactase like ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:45,495,650...45,514,096
Ensembl chr15:63,769,946...63,787,409 		JBrowse link
G LDHAL6B lactate dehydrogenase A like 6B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:38,176,451...38,179,189
Ensembl chr15:56,484,343...56,485,488 		JBrowse link
G LEO1 LEO1 homolog, Paf1/RNA polymerase II complex component ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:30,879,431...30,913,361
Ensembl chr15:49,208,132...49,241,055 		JBrowse link
G LIF LIF interleukin 6 family cytokine disease_progression ISO protein:increased expression:colon (human) RGD PMID:29899555 RGD:151356919 NCBI chr22:11,276,576...11,282,972
Ensembl chr22:29,078,862...29,095,608 		JBrowse link
G LIG4 DNA ligase 4 ISO DNA, mRNA:hypermethylation, decreased expression RGD PMID:24282031 RGD:8694072 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G LINC02694 long intergenic non-protein coding RNA 2694 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:17,625,792...17,629,200 JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:56,424,422...56,747,075
Ensembl chr15:72,328,079...72,347,016 		JBrowse link
G LIPC lipase C, hepatic type ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:37,363,507...37,537,723
Ensembl chr15:55,814,017...55,847,005 		JBrowse link
G LMAN1L lectin, mannose binding 1 like ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,754,682...53,768,324
Ensembl chr15:73,373,160...73,386,050 		JBrowse link
G LOC100971374 thioredoxin-interacting protein disease_progression ISO mRNA:decreased expression:stomach RGD PMID:12553030 RGD:1642760 NCBI chr 1:90,007,878...90,012,055 JBrowse link
G LOC100971447 E1A-binding protein p400 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr12:129,606,823...129,737,179
Ensembl chr12:134,045,829...134,163,185 		JBrowse link
G LOC100972994 HLA class II histocompatibility antigen, DQ beta 1 chain ISO DNA:CNVs RGD PMID:31001878 RGD:14974237 NCBI chr 6:32,237,395...32,244,201
Ensembl chr 6:33,353,599...33,360,272 		JBrowse link
G LOC100976982 solute carrier organic anion transporter family member 1B3 disease_progression ISO protein:increased expression:colorectum (human) RGD PMID:21677819 RGD:152995437 NCBI chr12:65,386,042...65,492,240 JBrowse link
G LOC100977072 neuronal acetylcholine receptor subunit alpha-7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr15:10,525,535...10,667,227
Ensembl chr15:29,565,885...29,705,194 		JBrowse link
G LOC100980965 zinc-alpha-2-glycoprotein disease_progression ISO mRNA,protein:decreased expression:colorectum:
protein:increased expression:serum		 RGD PMID:23393224 PMID:29755407 PMID:32525817 RGD:153350127 RGD:153350137 RGD:153350147 NCBI chr 7:91,999,717...92,009,066
Ensembl chr 7:105,432,782...105,442,219 		JBrowse link
G LOC100981651 chromosome 15 C15orf54 homolog ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:18,194,424...18,195,749 JBrowse link
G LOC100981854 cyclic AMP-dependent transcription factor ATF-7 disease_progression ISO RGD PMID:26148593 RGD:11055686 NCBI chr12:35,128,031...35,245,505
Ensembl chr12:35,914,378...36,021,141 		JBrowse link
G LOC100984344 calpain-3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,227,371...21,372,406
Ensembl chr15:39,476,302...39,528,820
Ensembl chr15:39,476,302...39,528,820 		JBrowse link
G LOC100987752 actin alpha cardiac muscle 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:13,707,475...13,712,905
Ensembl chr15:31,966,278...31,971,782 		JBrowse link
G LOC100988094 cytochrome c oxidase subunit 5A, mitochondrial ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,860,721...53,878,699 JBrowse link
G LOC100991599 creatine kinase U-type, mitochondrial ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,654,349...22,660,890 JBrowse link
G LOC117975990 golgin subfamily A member 8B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,895,442...12,917,196 JBrowse link
G LOC129392921 sodium/nucleoside cotransporter 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:63,551,499...63,613,461
Ensembl chr15:82,875,339...82,935,762
Ensembl chr15:82,875,339...82,935,762 		JBrowse link
G LOX lysyl oxidase severity ISO RGD PMID:21282564 RGD:150520218 NCBI chr 5:117,450,833...117,464,957
Ensembl chr 5:123,234,662...123,248,717 		JBrowse link
G LOXL1 lysyl oxidase like 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:52,835,675...52,861,324 JBrowse link
G LPCAT4 lysophosphatidylcholine acyltransferase 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,869,782...12,878,350
Ensembl chr15:31,704,297...31,712,779 		JBrowse link
G LRCOL1 leucine rich colipase like 1 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr12:129,955,122...129,962,424 JBrowse link
G LRP1B LDL receptor related protein 1B exacerbates ISO DNA:mutations, hpalotype:multiple (human)
DNA:mutations, haplotype:multiple: (human)		 RGD PMID:31693169 PMID:33836681 RGD:150429788 RGD:150429790 NCBI chr2B:17,702,178...19,611,567
Ensembl chr2B:144,382,759...146,221,243 		JBrowse link
G LRRC49 leucine rich repeat containing 49 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:49,841,934...50,023,736
Ensembl chr15:68,589,175...68,769,334 		JBrowse link
G LRRC57 leucine rich repeat containing 57 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,499,139...21,510,154
Ensembl chr15:39,659,387...39,666,068 		JBrowse link
G LTK leukocyte receptor tyrosine kinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,444,471...20,455,586
Ensembl chr15:38,685,255...38,695,381 		JBrowse link
G LYSMD2 LysM domain containing 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:30,661,922...30,690,653 JBrowse link
G MAN2C1 mannosidase alpha class 2C member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,272,142...54,285,102
Ensembl chr15:73,868,134...73,880,704 		JBrowse link
G MAP1A microtubule associated protein 1A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,472,641...22,493,293
Ensembl chr15:40,627,099...40,647,752 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:45,337,117...45,438,826
Ensembl chr15:63,613,961...63,714,161 		JBrowse link
G MAP2K2 mitogen-activated protein kinase kinase 2 ISO mRNA:decreased expression:colorectum (human) RGD PMID:28000901 RGD:150530480 NCBI chr19:3,114,445...3,148,619
Ensembl chr19:4,064,626...4,097,933 		JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 severity
ameliorates		 ISO protein:decreased expression:colorectum (human)
DNA:SNPs:promoter: -1304G>G, -1304T>G (rs3826392) (human)		 RGD PMID:19610067 PMID:28423721 RGD:150429743 RGD:150429744 NCBI chr17:39,497,105...39,622,331
Ensembl chr17:44,248,857...44,359,909 		JBrowse link
G MAP2K5 mitogen-activated protein kinase kinase 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:46,493,139...46,760,271
Ensembl chr15:64,761,394...65,029,655 		JBrowse link
G MAP3K8 mitogen-activated protein kinase kinase kinase 8 disease_progression ISO RGD PMID:23322277 PMID:29763718 RGD:151356994 RGD:151356995 NCBI chr10:30,579,220...30,607,249
Ensembl chr10:30,933,483...30,960,824 		JBrowse link
G MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 exacerbates ISO mRNA:increased expression:colorectum (human)
protein:increased expression:colorectum (human)
mRNA, protein:increased expression:colorectum, lymph node, blood serum (human)
mRNA:splicing variants:colorectum (human)		 RGD PMID:20077526 PMID:25602366 PMID:27882171 PMID:29138007 RGD:151347675 RGD:151347676 RGD:151347679 RGD:151347680 Ensembl chr2A:102,750,221...102,945,263 JBrowse link
G MAPDA N6-Methyl-AMP deaminase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,291,939...22,315,830
Ensembl chr15:40,451,403...40,468,241 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 exacerbates ISO associated with experimental colitis RGD PMID:22828150 RGD:151665346 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114 		JBrowse link
G MAPK6 mitogen-activated protein kinase 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:30,946,218...31,007,987
Ensembl chr15:49,273,095...49,335,754 		JBrowse link
G MAPK9 mitogen-activated protein kinase 9 treatment ISO RGD PMID:25205654 RGD:13217416 NCBI chr 5:175,437,167...175,495,469
Ensembl chr 5:182,748,381...182,795,135 		JBrowse link
G MAPKBP1 mitogen-activated protein kinase binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,713,859...20,768,224 JBrowse link
G MCC MCC regulator of WNT signaling pathway ISO OMIM NCBI chr 5:108,382,066...108,845,503
Ensembl chr 5:114,184,907...114,647,847 		JBrowse link
G MCL1 MCL1 apoptosis regulator, BCL2 family member disease_progression ISO DNA:SNP:promoter: (rs9803935) (human)
mRNA,protein:increased expression:colon (human)		 RGD PMID:29899555 PMID:32619164 RGD:151356738 RGD:151356919 NCBI chr 1:125,918,760...125,923,952
Ensembl chr 1:129,566,827...129,572,086 		JBrowse link
G MEGF11 multiple EGF like domains 11 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,836,750...45,208,674
Ensembl chr15:63,116,564...63,204,508 		JBrowse link
G MEIS2 Meis homeobox 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:15,814,739...16,025,512
Ensembl chr15:34,072,665...34,282,477 		JBrowse link
G MESD mesoderm development LRP chaperone ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:59,959,985...59,970,904
Ensembl chr15:78,914,991...78,926,612 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,440,626...68,441,935
Ensembl chr15:87,645,768...87,647,210 		JBrowse link
G MESP2 mesoderm posterior bHLH transcription factor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,470,528...68,473,209 JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 7:108,646,278...108,772,238
Ensembl chr 7:121,365,438...121,468,159 		JBrowse link
G MEX3B mex-3 RNA binding family member B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:61,025,026...61,029,324
Ensembl chr15:82,172,946...82,180,581 		JBrowse link
G MFAP1 microfibril associated protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,764,678...22,784,934
Ensembl chr15:40,856,392...40,875,376 		JBrowse link
G MFGE8 milk fat globule EGF and factor V/VIII domain containing ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:67,587,360...67,602,029
Ensembl chr15:86,795,135...86,809,876 		JBrowse link
G MGA MAX dimerization protein MGA ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,560,842...20,710,269
Ensembl chr15:38,839,708...38,948,847 		JBrowse link
G MINAR1 membrane integral NOTCH2 associated receptor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:58,402,688...58,445,461
Ensembl chr15:77,361,433...77,402,124 		JBrowse link
G MINDY2 MINDY lysine 48 deubiquitinase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:37,737,665...37,831,501
Ensembl chr15:56,047,970...56,134,203 		JBrowse link
G MKI67 marker of proliferation Ki-67 ameliorates ISO human cells in mouse model RGD PMID:34974791 RGD:153344629 NCBI chr10:124,684,336...124,714,143
Ensembl chr10:128,936,037...128,962,555 		JBrowse link
G MLH1 mutL homolog 1 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm		 ClinVar PMID:11726306 PMID:12919137 PMID:15849733 PMID:17895478 PMID:18931482 More... NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801 		JBrowse link
G MLH3 mutL homolog 3 sexual_dimorphism ISO DNA:SNP:3'utr: (rs108621)
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm		 RGD
OMIM
ClinVar		 PMID:25741868 PMID:28492532 PMID:29516665 RGD:153344543 NCBI chr14:55,568,033...55,603,672
Ensembl chr14:74,413,319...74,445,749 		JBrowse link
G MMP2 matrix metallopeptidase 2 ISO human cells in mouse model RGD PMID:30789971 RGD:151893289 NCBI chr16:35,711,866...35,738,881
Ensembl chr16:54,812,694...54,844,279 		JBrowse link
G MMP9 matrix metallopeptidase 9 treatment ISO mRNA:increased expresion:colorectum (human)
human cells in mouse model		 RGD PMID:21839130 PMID:32682784 RGD:152985531 RGD:153297782 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129 		JBrowse link
G MNS1 meiosis specific nuclear structural 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:35,377,490...35,433,871
Ensembl chr15:53,714,110...53,750,050 		JBrowse link
G MORF4L1 mortality factor 4 like 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,844,220...57,869,139
Ensembl chr15:76,772,007...76,829,259 		JBrowse link
G MPI mannose phosphate isomerase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,832,088...53,841,832
Ensembl chr15:73,449,439...73,457,205 		JBrowse link
G MRPL46 mitochondrial ribosomal protein L46 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:67,151,616...67,159,521
Ensembl chr15:86,359,188...86,367,113 		JBrowse link
G MRPS11 mitochondrial ribosomal protein S11 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:67,159,746...67,172,891
Ensembl chr15:86,367,127...86,377,728 		JBrowse link
G MSH2 mutS homolog 2 ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm		 ClinVar PMID:1710317 PMID:8700523 PMID:9259192 PMID:9774676 PMID:11208710 More... NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MSH6 mutS homolog 6 ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm		 ClinVar PMID:10537275 PMID:10612827 PMID:11470537 PMID:11900875 PMID:14520694 More... NCBI chr2A:47,901,591...47,926,662
Ensembl chr2A:48,824,350...48,849,779 		JBrowse link
G MTFMT mitochondrial methionyl-tRNA formyltransferase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,942,227...43,969,182
Ensembl chr15:62,225,620...62,253,612 		JBrowse link
G MTHFS methenyltetrahydrofolate synthetase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:58,810,966...58,864,831
Ensembl chr15:77,770,216...77,822,206 		JBrowse link
G MTMR10 myotubularin related protein 10 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr15:9,431,261...9,484,107
Ensembl chr15:28,469,039...28,521,997 		JBrowse link
G MUC8 mucin 8 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532
G MUTYH mutY DNA glycosylase ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer		 ClinVar PMID:11818965 PMID:12393807 PMID:12606733 PMID:12917422 PMID:15036665 More... NCBI chr 1:44,632,102...44,643,292
Ensembl chr 1:45,990,588...46,002,645 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor ameliorates
severity
disease_progression		 ISO DNA:SNP:promoter: (rs4988453) (human)
protein:increased expression:colonic mucosa (human)
mRNA:decreased expression:colon (human)		 RGD PMID:20145615 PMID:24154872 PMID:24887488 PMID:30221070 RGD:150519917 RGD:150520171 RGD:150524331 RGD:150524336 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572 		JBrowse link
G MYEF2 myelin expression factor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:27,086,001...27,127,313
Ensembl chr15:45,412,593...45,443,600 		JBrowse link
G MYO1B myosin IB ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr2B:78,549,494...78,728,819
Ensembl chr2B:196,465,078...196,644,188 		JBrowse link
G MYO1E myosin IE ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:38,106,599...38,343,040
Ensembl chr15:56,413,570...56,649,722 		JBrowse link
G MYO5A myosin VA ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:31,246,192...31,470,040
Ensembl chr15:49,578,491...49,704,319 		JBrowse link
G MYO5C myosin VC ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:31,133,566...31,235,074
Ensembl chr15:49,459,741...49,549,752 		JBrowse link
G MYO9A myosin IXA ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:50,771,747...51,069,700
Ensembl chr15:69,541,318...69,760,771 		JBrowse link
G MYZAP myocardial zonula adherens protein ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr15:36,560,355...36,653,881
Ensembl chr15:54,873,644...54,997,202 		JBrowse link
G NDC80 NDC80 kinetochore complex component ISO mRNA:increased expression:colorectum RGD PMID:19878654 RGD:28867241 NCBI chr18:11,666,099...11,711,456
Ensembl chr18:13,972,637...14,018,261 		JBrowse link
G NDUFAF1 NADH:ubiquinone oxidoreductase complex assembly factor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,326,486...20,341,156
Ensembl chr15:38,569,731...38,583,872 		JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:34,798,880...34,963,823
Ensembl chr15:53,118,411...53,283,076 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,263,424...54,271,601
Ensembl chr15:73,858,910...73,867,474 		JBrowse link
G NEO1 neogenin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,968,238...52,221,116
Ensembl chr15:70,789,035...70,977,178 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor ISO DNA:loss of heterozygosity RGD PMID:24323642 RGD:150530506 NCBI chr22:10,648,022...10,738,167
Ensembl chr22:28,454,119...28,544,013 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 treatment ISO ClinVar Annotator: match by term: Colorectal cancer RGD
ClinVar		 PMID:22859375 PMID:29018201 RGD:10412740 NCBI chr2B:64,509,446...64,544,600
Ensembl chr2B:182,214,116...182,248,085 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 ISO associated with Experimental Colitis RGD PMID:25727407 RGD:40902978 NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098 		JBrowse link
G NGRN neugrin, neurite outgrowth associated ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,954,039...68,960,612
Ensembl chr15:88,156,109...88,162,659 		JBrowse link
G NMB neuromedin B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:63,322,869...63,326,989 JBrowse link
G NOC4L nucleolar complex associated 4 homolog ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr12:129,803,084...129,809,412
Ensembl chr12:134,228,060...134,238,121 		JBrowse link
G NOP10 NOP10 ribonucleoprotein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,850,708...12,852,171
Ensembl chr15:31,684,833...31,686,305 		JBrowse link
G NOX5 NADPH oxidase 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:47,961,085...48,003,529
Ensembl chr15:66,734,521...66,777,037 		JBrowse link
G NPTN neuroplastin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:52,470,545...52,544,046
Ensembl chr15:71,229,992...71,269,579 		JBrowse link
G NR2E3 nuclear receptor subfamily 2 group E member 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:50,759,707...50,767,703
Ensembl chr15:69,525,351...69,533,034 		JBrowse link
G NRAS NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm OMIM
ClinVar		 PMID:17671181 PMID:22220252 PMID:23325582 PMID:23708912 PMID:24806883 More... NCBI chr 1:87,837,146...87,850,013
Ensembl chr 1:122,890,505...122,903,585 		JBrowse link
G NRG4 neuregulin 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,849,104...54,972,379
Ensembl chr15:74,449,691...74,518,748 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 disease_progression ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 RGD
ClinVar		 PMID:28492532 PMID:33593392 RGD:150520009 NCBI chr15:66,566,219...66,953,279
Ensembl chr15:85,776,832...86,157,204 		JBrowse link
G NUF2 NUF2 component of NDC80 kinetochore complex disease_progression ISO mRNA:increased expression:colorectum RGD PMID:19878654 PMID:24247253 RGD:28867241 RGD:28867244 NCBI chr 1:138,743,251...138,777,201
Ensembl chr 1:142,538,420...142,572,364 		JBrowse link
G NUSAP1 nucleolar and spindle associated protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,273,953...20,322,512
Ensembl chr15:38,517,591...38,564,695 		JBrowse link
G NUTM1 NUT midline carcinoma family member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,852,280...12,868,873
Ensembl chr15:31,686,443...31,703,128 		JBrowse link
G OAZ2 ornithine decarboxylase antizyme 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,629,712...43,645,426
Ensembl chr15:61,919,532...61,933,821 		JBrowse link
G OIP5 Opa interacting protein 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,250,339...20,273,856
Ensembl chr15:38,494,534...38,517,300 		JBrowse link
G ONECUT1 one cut homeobox 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:31,694,830...31,727,644
Ensembl chr15:50,016,010...50,053,062 		JBrowse link
G OSBP oxysterol binding protein ISO RGD PMID:21999571 RGD:41404653 NCBI chr11:54,800,756...54,841,191
Ensembl chr11:58,252,925...58,291,154 		JBrowse link
G OTUD7A OTU deubiquitinase 7A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr15:9,974,737...10,360,991 JBrowse link
G P2RX2 purinergic receptor P2X 2 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr12:129,969,793...129,974,399 JBrowse link
G PAK6 p21 (RAC1) activated kinase 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,173,171...19,211,572
Ensembl chr15:37,453,802...37,465,119 		JBrowse link
G PAK6-AS1 PAK6 antisense RNA 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,184,775...19,187,261 JBrowse link
G PALB2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:17200668 PMID:17200671 PMID:17200672 PMID:17420451 PMID:19264984 More... NCBI chr16:14,470,367...14,507,841
Ensembl chr16:23,855,535...23,892,117 		JBrowse link
G PAQR5 progestin and adipoQ receptor family member 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:48,248,552...48,357,205
Ensembl chr15:67,082,077...67,127,765 		JBrowse link
G PARP16 poly(ADP-ribose) polymerase family member 16 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,163,785...44,231,895
Ensembl chr15:62,485,144...62,513,722 		JBrowse link
G PARP6 poly(ADP-ribose) polymerase family member 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,191,718...51,223,312
Ensembl chr15:69,955,568...69,987,061 		JBrowse link
G PATL2 PAT1 homolog 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:23,622,330...23,667,962
Ensembl chr15:41,790,682...41,801,825 		JBrowse link
G PBRM1 polybromo 1 severity ISO RGD PMID:28940253 RGD:150340627 NCBI chr 3:52,487,083...52,626,418
Ensembl chr 3:53,718,051...53,850,146 		JBrowse link
G PCLAF PCNA clamp associated factor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,311,115...43,331,979
Ensembl chr15:61,602,830...61,617,303 		JBrowse link
G PDCD7 programmed cell death 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,057,667...44,073,812 JBrowse link
G PDE8A phosphodiesterase 8A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:63,649,336...63,805,613
Ensembl chr15:82,971,986...83,127,957 		JBrowse link
G PDGFRL platelet derived growth factor receptor like ISO OMIM NCBI chr 8:16,795,211...16,862,637
Ensembl chr 8:13,747,164...13,816,294 		JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,706,520...22,731,672
Ensembl chr15:40,794,144...40,821,763 		JBrowse link
G PEAK1 pseudopodium enriched atypical kinase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:56,038,568...56,348,118 JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 susceptibility ISO DNA:SNP:exon: (rs329497) (human) RGD PMID:33470690 RGD:152995405 NCBI chr2A:64,160,362...64,213,200
Ensembl chr2A:65,284,480...65,336,339 		JBrowse link
G PEX11A peroxisomal biogenesis factor 11 alpha ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,375,201...68,384,440
Ensembl chr15:87,581,564...87,590,684 		JBrowse link
G PGBD4 piggyBac transposable element derived 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,611,489...12,617,110 JBrowse link
G PHOX2B paired like homeobox 2B ISO DNA:hypermethylation: : (human) RGD PMID:22552777 RGD:152025258 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449 		JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:47,006,718...47,141,035
Ensembl chr15:65,276,530...65,410,105 		JBrowse link
G PIERCE2 piercer of microtubule wall 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:34,379,792...34,390,023
Ensembl chr15:52,702,057...52,712,290 		JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,756,605...43,766,631
Ensembl chr15:62,041,461...62,052,311 		JBrowse link
G PIGB phosphatidylinositol glycan anchor biosynthesis class B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:34,288,600...34,325,079
Ensembl chr15:52,611,474...52,647,797 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer		 OMIM
ClinVar		 PMID:15016963 PMID:15254419 PMID:15520168 PMID:15647370 PMID:15805248 More... NCBI chr 3:176,182,765...176,272,024
Ensembl chr 3:184,355,785...184,441,977 		JBrowse link
G PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta ameliorates ISO human cells in mouse model RGD PMID:30789971 RGD:151893289 NCBI chr 3:135,685,120...135,867,096
Ensembl chr 3:143,288,563...143,431,314 		JBrowse link
G PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta ISO DNA:hypermethylation RGD PMID:25366420 RGD:13432038 NCBI chr 1:8,418,570...8,495,435
Ensembl chr 1:9,686,208...9,724,633 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:22351933 PMID:25133428 PMID:25741868 PMID:28492532 NCBI chr 5:45,701,219...45,786,652
Ensembl chr 5:47,267,286...47,350,960 		JBrowse link
G PKM pyruvate kinase M1/2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,149,584...51,182,193
Ensembl chr15:69,913,455...69,945,832 		JBrowse link
G PLA2G2A phospholipase A2 group IIA susceptibility ISO OMIM NCBI chr 1:18,930,294...18,934,563
Ensembl chr 1:19,971,084...19,977,627 		JBrowse link
G PLA2G4D phospholipase A2 group IVD ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,021,875...21,048,848
Ensembl chr15:39,182,100...39,208,996 		JBrowse link
G PLA2G4E phospholipase A2 group IVE ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,937,573...20,975,388
Ensembl chr15:39,095,777...39,165,161 		JBrowse link
G PLA2G4F phospholipase A2 group IVF ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,095,474...21,110,983
Ensembl chr15:39,253,819...39,271,482 		JBrowse link
G PLCB2 phospholipase C beta 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,218,329...19,241,977
Ensembl chr15:37,476,699...37,496,813 		JBrowse link
G PLCG1 phospholipase C gamma 1 ISO protein:increased expression:colorectum (human) RGD PMID:8275435 RGD:151356938 NCBI chr20:37,477,077...37,515,854
Ensembl chr20:38,572,709...38,615,145 		JBrowse link
G PLEKHO2 pleckstrin homology domain containing O2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,782,812...43,808,969
Ensembl chr15:62,052,563...62,093,865 		JBrowse link
G PLIN1 perilipin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,357,815...68,375,062
Ensembl chr15:87,565,468...87,577,301 		JBrowse link
G PML PML nuclear body scaffold ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883 		JBrowse link
G PMS1 PMS1 homolog 1, mismatch repair system component ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr2B:77,090,215...77,180,724
Ensembl chr2B:195,010,233...195,100,492 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm		 ClinVar PMID:21157497 PMID:24033266 PMID:25637381 PMID:25741868 PMID:25938944 More... NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit exacerbates
susceptibility
onset
severity
disease_progression
sexual_dimorphism 		ISO DNA:mutations:multiple (human)
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer with chromosomal instability, somatic | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: DLC1-related condition | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 3 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
DNA:missense mutation:CDS:multiple (human)
protein:decreased expression:colorectum (human)
DNA:missense mutation:CDS, exon 9:p.P286R (human)
DNA:missense mutation:CDS:p.L424V (human)		 RGD
OMIM
ClinVar		 PMID:3432686 PMID:9536098 PMID:12424237 PMID:14760276 PMID:15285897 More... RGD:151347638 RGD:151347640 RGD:151347642 RGD:151347643 RGD:151347652 RGD:151356953 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,008,214...68,028,241
Ensembl chr15:87,214,451...87,234,739 		JBrowse link
G POLR2M RNA polymerase II subunit M ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:36,674,521...36,685,343
Ensembl chr15:54,873,644...54,997,202 		JBrowse link
G POT1 protection of telomeres 1 disease_progression ISO mRNA:increased expression:colorectum
DNA:SNP: :rs116895242 (human)
DNA:SNP: :rs2975843 (human)		 RGD PMID:25194444 PMID:27459707 PMID:32586834 RGD:151356940 RGD:151356943 RGD:151356949 NCBI chr 7:116,807,913...116,926,998
Ensembl chr 7:129,487,571...129,605,558 		JBrowse link
G PPCDC phosphopantothenoylcysteine decarboxylase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,963,001...54,001,550
Ensembl chr15:73,579,583...73,606,834 		JBrowse link
G PPIB peptidylprolyl isomerase B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,108,139...43,115,470
Ensembl chr15:61,400,272...61,406,758 		JBrowse link
G PPIP5K1 diphosphoinositol pentakisphosphate kinase 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,495,159...22,553,264 JBrowse link
G PPP1R14D protein phosphatase 1 regulatory inhibitor subunit 14D ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,756,077...19,786,920
Ensembl chr15:38,007,632...38,022,094 		JBrowse link
G PRDM1 PR/SET domain 1 ISO mRNA:increased expression:colorectum: RGD PMID:32393998 RGD:150530478 NCBI chr 6:103,899,410...103,923,389
Ensembl chr 6:107,773,229...107,796,815 		JBrowse link
G PRDX2 peroxiredoxin 2 disease_progression ISO RGD PMID:23393224 RGD:153350137 NCBI chr19:12,359,084...12,363,552
Ensembl chr19:13,103,422...13,107,369 		JBrowse link
G PRTG protogenin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:34,579,267...34,715,039
Ensembl chr15:52,910,486...53,032,562 		JBrowse link
G PSMA4 proteasome 20S subunit alpha 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,468,590...57,477,390
Ensembl chr15:76,431,890...76,440,655 		JBrowse link
G PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 Ensembl chr15:75,533,114...75,552,365 JBrowse link
G PTEN phosphatase and tensin homolog exacerbates ISO protein:increased expression:colorectum, cytoplasm (human) RGD PMID:27661110 RGD:127285614 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
G PTPN12 protein tyrosine phosphatase non-receptor type 12 ISO OMIM NCBI chr 7:69,457,158...69,560,111
Ensembl chr 7:83,268,834...83,371,120 		JBrowse link
G PTPN13 protein tyrosine phosphatase non-receptor type 13 susceptibility ISO DNA:missense mutations:cds:p.I1522M, p.Y2081D (human) RGD PMID:19672627 RGD:152176665 NCBI chr 4:78,893,598...79,118,745
Ensembl chr 4:89,623,271...89,847,616 		JBrowse link
G PTPN9 protein tyrosine phosphatase non-receptor type 9 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,382,689...54,489,942
Ensembl chr15:73,978,147...74,034,204 		JBrowse link
G PTPRJ protein tyrosine phosphatase receptor type J susceptibility ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
DNA:missense mutations:cds:p.R326Q, p.Q276P (human)		 OMIM
ClinVar
RGD		 PMID:12089527 PMID:19672627 PMID:25741868 PMID:33116287 RGD:152176665 NCBI chr11:47,941,134...48,130,538
Ensembl chr11:48,613,761...48,670,494 		JBrowse link
G PTPRT protein tyrosine phosphatase receptor type T treatment ISO DNA:deletion: RGD PMID:30200630 RGD:150520195 NCBI chr20:38,399,267...39,526,776
Ensembl chr20:39,502,794...40,317,701 		JBrowse link
G PUS1 pseudouridine synthase 1 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 ClinVar PMID:28492532 NCBI chr12:129,583,040...129,598,328
Ensembl chr12:134,011,932...134,027,160 		JBrowse link
G PYGO1 pygopus family PHD finger 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:34,509,787...34,556,686
Ensembl chr15:52,838,651...52,879,630 		JBrowse link
G RAB11A RAB11A, member RAS oncogene family ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,810,880...44,833,438
Ensembl chr15:63,088,084...63,108,077 		JBrowse link
G RAB27A RAB27A, member RAS oncogene family ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:34,174,491...34,263,045
Ensembl chr15:52,498,202...52,529,984 		JBrowse link
G RAB8B RAB8B, member RAS oncogene family ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:42,136,776...42,214,792
Ensembl chr15:60,432,749...60,510,547 		JBrowse link
G RAC1 Rac family small GTPase 1 disease_progression
ameliorates		 ISO mRNA:alternative form
human cell line in a mouse model		 RGD PMID:17597401 PMID:24833563 PMID:29884911 RGD:13432050 RGD:13432052 RGD:152998911 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RAD51 RAD51 recombinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RAD51D RAD51 paralog D ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:20665887 PMID:21822267 PMID:22986143 PMID:24130102 PMID:24240112 More... NCBI chr17:21,666,236...21,693,886
Ensembl chr17:21,958,212...21,978,406 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein onset
susceptibility		 ISO DNA:SNP,haplotypes:3'utr: (rs1051669) (human)
DNA:SNPs:3'utr: (rs7963551, rs11226) (human)		 RGD PMID:26735576 PMID:29245274 RGD:151361161 RGD:151361212 NCBI chr12:986,372...1,066,708
Ensembl chr12:946,825...985,668 		JBrowse link
G RAD54B RAD54 homolog B ISO OMIM NCBI chr 8:90,995,229...91,098,149
Ensembl chr 8:92,939,535...93,034,060 		JBrowse link
G RAMAC RNA guanine-7 methyltransferase activating subunit ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:62,613,027...62,617,863
Ensembl chr15:80,876,487...80,881,337 		JBrowse link
G RAMP2 receptor activity modifying protein 2 ISO mRNA:increased expression:colorectum (human) RGD PMID:21839130 RGD:152985531 NCBI chr17:14,554,888...14,557,175
Ensembl chr17:14,779,666...14,781,481 		JBrowse link
G RAMP3 receptor activity modifying protein 3 ISO mRNA:increased expression:colorectum (human) RGD PMID:21839130 RGD:152985531 NCBI chr 7:45,871,687...45,898,159
Ensembl chr 7:45,937,607...45,966,041 		JBrowse link
G RASGRF1 Ras protein specific guanine nucleotide releasing factor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,933,152...58,063,824
Ensembl chr15:76,891,556...77,022,534 		JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:17,417,684...17,494,333
Ensembl chr15:35,675,348...35,750,315 		JBrowse link
G RASL12 RAS like family 12 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,992,879...44,007,564
Ensembl chr15:62,277,131...62,300,660 		JBrowse link
G RBFOX1 RNA binding fox-1 homolog 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr16:4,162,659...6,640,962
Ensembl chr16:5,418,607...7,889,215 		JBrowse link
G RBM10 RNA binding motif protein 10 onset ISO RGD PMID:33194656 RGD:151356979 NCBI chr  X:39,582,480...39,623,749
Ensembl chr  X:47,440,815...47,481,204 		JBrowse link
G RBPMS2 RNA binding protein, mRNA processing factor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,682,513...43,718,330
Ensembl chr15:61,970,407...61,981,958 		JBrowse link
G RCN2 reticulocalbin 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:55,857,130...55,875,365
Ensembl chr15:75,445,908...75,463,947 		JBrowse link
G REC114 REC114 meiotic recombination protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:52,357,979...52,470,811
Ensembl chr15:71,116,084...71,228,098 		JBrowse link
G REL REL proto-oncogene, NF-kB subunit susceptibility ISO associated with Experimental Colitis RGD PMID:25727407 RGD:40902978 NCBI chr2A:60,972,022...61,013,562
Ensembl chr2A:62,113,581...62,155,241 		JBrowse link
G RET ret proto-oncogene ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr10:40,050,396...40,103,629
Ensembl chr10:43,249,468...43,284,331 		JBrowse link
G RFX7 regulatory factor X7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:35,057,195...35,211,897
Ensembl chr15:53,376,869...53,527,541 		JBrowse link
G RHCG Rh family C glycoprotein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,165,708...68,190,964
Ensembl chr15:87,372,238...87,397,011 		JBrowse link
G RHOA ras homolog family member A ISO RGD PMID:17597401 RGD:13432052 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G RHOV ras homolog family member V ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,814,817...19,816,925
Ensembl chr15:38,064,587...38,066,873 		JBrowse link
G RICTOR RPTOR independent companion of MTOR complex 2 disease_progression ISO associated with Lymphatic Metastasis; protein:increased expression:colon (human) RGD PMID:27063170 RGD:152995519 NCBI chr 5:71,299,215...71,435,290
Ensembl chr 5:76,389,130...76,469,830 		JBrowse link
G RLBP1 retinaldehyde binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:67,901,276...67,913,911
Ensembl chr15:87,108,815...87,117,971 		JBrowse link
G RMDN3 regulator of microtubule dynamics 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,676,789...19,696,297
Ensembl chr15:37,929,628...37,947,856 		JBrowse link
G RMI1 RecQ mediated genome instability 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 9:40,875,290...40,898,613
Ensembl chr 9:83,356,786...83,358,663 		JBrowse link
G RNF111 ring finger protein 111 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:37,957,390...38,068,006
Ensembl chr15:56,265,379...56,374,484 		JBrowse link
G RNF43 ring finger protein 43 ameliorates
treatment
onset
exacerbates		 ISO DNA:silent mutation, missense mutation:exon 3:p.R117R, p.R117H (rs2257205) (human)
associated with Neoplasm Metastasis;DNA:mutations:multiple (human)
mRNA, protein:decreased expression:colorectum (human)
protein:decreased expression:colorectum (mouse)
DNA:mutations:multiple: (human)		 RGD PMID:22202234 PMID:22977472 PMID:23267878 PMID:25344691 PMID:27661107 More... RGD:151356979 RGD:151361145 RGD:151361209 RGD:151361218 RGD:151361223 RGD:151361224 RGD:151361228 RGD:151665113 RGD:151665114 RGD:151665115 RGD:151665116 NCBI chr17:52,420,516...52,492,813
Ensembl chr17:57,276,761...57,347,748 		JBrowse link
G RORA RAR related orphan receptor A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460 		JBrowse link
G RPAP1 RNA polymerase II associated protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,457,993...20,485,371
Ensembl chr15:38,698,454...38,724,730 		JBrowse link
G RPL4 ribosomal protein L4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:45,446,582...45,452,173
Ensembl chr15:63,721,912...63,727,477 		JBrowse link
G RPLP1 ribosomal protein lateral stalk subunit P1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:48,403,415...48,406,149
Ensembl chr15:67,173,832...67,176,570 		JBrowse link
G RPP25 ribonuclease P and MRP subunit p25 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,895,547...53,897,922
Ensembl chr15:73,513,375...73,513,974 		JBrowse link
G RPS17 ribosomal protein S17 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:63,056,604...63,060,436 JBrowse link
G RPS27L ribosomal protein S27 like ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:42,101,137...42,105,019
Ensembl chr15:60,397,131...60,400,643 		JBrowse link
G RPUSD2 RNA pseudouridine synthase domain containing 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,514,711...19,519,752
Ensembl chr15:37,767,822...37,772,857 		JBrowse link
G RSL24D1 ribosomal L24 domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:34,152,671...34,168,532 JBrowse link
G RTF1 RTF1 homolog, Paf1/RNA polymerase II complex component ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,355,927...20,424,153
Ensembl chr15:38,599,163...38,662,100 		JBrowse link
G RUNX2 RUNX family transcription factor 2 ISO RGD PMID:25925209 RGD:126779569 NCBI chr 6:45,003,962...45,133,148
Ensembl chr 6:46,189,432...46,524,389 		JBrowse link
G RUNX3 RUNX family transcription factor 3 ISO RGD PMID:25925209 RGD:126779569 NCBI chr 1:24,097,321...24,164,065
Ensembl chr 1:25,073,134...25,137,335 		JBrowse link
G RYR3 ryanodine receptor 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr15:11,816,430...12,379,101
Ensembl chr15:30,817,428...31,214,494 		JBrowse link
G SAXO2 stabilizer of axonemal microtubules 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:61,243,727...61,265,885 JBrowse link
G SCAMP2 secretory carrier membrane protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,786,314...53,816,203
Ensembl chr15:73,404,173...73,434,025 		JBrowse link
G SCAMP5 secretory carrier membrane protein 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,935,756...53,961,611
Ensembl chr15:73,565,906...73,577,524 		JBrowse link
G SCAPER S-phase cyclin A associated protein in the ER ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:55,263,970...55,830,877
Ensembl chr15:74,855,612...75,377,042 		JBrowse link
G SCG3 secretogranin III ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:30,619,990...30,658,668
Ensembl chr15:48,950,839...48,989,481 		JBrowse link
G SCG5 secretogranin V ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:26947005 PMID:28492532 More... NCBI chr15:11,136,920...11,192,606
Ensembl chr15:29,974,633...30,030,291 		JBrowse link
G SEC11A SEC11 homolog A, signal peptidase complex subunit ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:28492532 NCBI chr15:63,337,266...63,384,532 JBrowse link
G SECISBP2L SECIS binding protein 2 like ISO ClinVar Annotator: match by term: Malignant Colorectal Neoplasm ClinVar PMID:28492532 NCBI chr15:27,937,192...28,033,830
Ensembl chr15:46,260,387...46,318,036 		JBrowse link
G SEMA4A semaphorin 4A ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:25637381 PMID:25741868 PMID:28492532 NCBI chr 1:131,489,446...131,519,864
Ensembl chr 1:135,321,288...135,350,724 		JBrowse link
G SEMA4B semaphorin 4B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,873,927...68,918,792
Ensembl chr15:88,076,399...88,120,729 		JBrowse link
G SEMA6D semaphorin 6D ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:26,135,344...26,725,571
Ensembl chr15:44,994,073...45,050,169 		JBrowse link
G SEMA7A semaphorin 7A (JohnMiltonHagen blood group) ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,351,662...53,376,327
Ensembl chr15:72,972,475...72,996,953 		JBrowse link
G SENP8 SUMO peptidase family member, NEDD8 specific ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,069,863...51,092,561
Ensembl chr15:69,854,934...69,855,572 		JBrowse link
G SEPTIN9 septin 9 ISO DNA:hypermethylation:urine: RGD PMID:33504902 RGD:153344542 NCBI chr17:71,361,002...71,580,995
Ensembl chr17:76,920,236...77,139,586 		JBrowse link
G SERF2 small EDRK-rich factor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,752,018...22,754,220 JBrowse link
G SERINC4 serine incorporator 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,755,169...22,760,184
Ensembl chr15:40,845,167...40,850,960 		JBrowse link
G SERPINA1 serpin family A member 1 ISO protein:increased expression:serum RGD PMID:24886427 RGD:14695524 NCBI chr14:75,001,714...75,014,214
Ensembl chr14:94,334,258...94,345,419 		JBrowse link
G SERPINF1 serpin family F member 1 disease_progression ISO RGD PMID:23393224 RGD:153350137 NCBI chr17:1,745,597...1,761,399
Ensembl chr17:1,638,556...1,653,568 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase exacerbates ISO DNA:frameshift mutation:exon 3:c.4219delA (human)
mRNA:decreased expression:colon (human)		 RGD PMID:24925220 PMID:26069251 PMID:28825595 RGD:150429636 RGD:150429645 RGD:150429646 NCBI chr 3:46,916,615...47,064,046
Ensembl chr 3:48,018,517...48,163,999 		JBrowse link
G SGK2 serum/glucocorticoid regulated kinase 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr20:39,897,338...39,924,767
Ensembl chr20:40,997,536...41,018,587 		JBrowse link
G SH2B3 SH2B adaptor protein 3 susceptibility ISO DNA:missense mutation:CDS:p.W263R (rs3184504) (human) RGD PMID:26553438 RGD:11041896 NCBI chr12:108,977,344...109,024,029 JBrowse link
G SH2D7 SH2 domain containing 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,021,217...57,031,176 JBrowse link
G SH3GL3 SH3 domain containing GRB2 like 3, endophilin A3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:61,988,584...62,153,543
Ensembl chr15:81,337,529...81,501,770 		JBrowse link
G SHC4 SHC adaptor protein 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:27,773,442...27,913,790
Ensembl chr15:46,098,526...46,236,533 		JBrowse link
G SHF Src homology 2 domain containing F ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,100,832...24,146,702
Ensembl chr15:42,469,202...42,500,239 		JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:22901214 RGD:150520174 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SIN3A SIN3 transcription regulator family member A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,285,587...54,371,376
Ensembl chr15:73,881,500...73,966,506 		JBrowse link
G SKIC8 SKI8 subunit of superkiller complex ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:57,204,199...57,229,052
Ensembl chr15:76,175,131...76,194,368 		JBrowse link
G SKOR1 SKI family transcriptional corepressor 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:46,722,712...46,787,689 JBrowse link
G SLC12A1 solute carrier family 12 member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:27,155,331...27,252,995
Ensembl chr15:45,479,583...45,577,084 		JBrowse link
G SLC12A6 solute carrier family 12 member 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:12,741,526...12,846,894
Ensembl chr15:31,576,756...31,680,061 		JBrowse link
G SLC24A1 solute carrier family 24 member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,552,886...44,597,640
Ensembl chr15:62,831,987...62,882,431 		JBrowse link
G SLC24A5 solute carrier family 24 member 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:27,069,937...27,091,619
Ensembl chr15:45,394,090...45,415,823 		JBrowse link
G SLC27A2 solute carrier family 27 member 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:29,130,262...29,182,752
Ensembl chr15:47,452,227...47,505,066 		JBrowse link
G SLC28A2 solute carrier family 28 member 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,199,846...24,223,378
Ensembl chr15:42,554,142...42,578,096 		JBrowse link
G SLC30A4 solute carrier family 30 member 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,425,816...24,469,085
Ensembl chr15:42,758,455...42,798,815 		JBrowse link
G SLC51B SLC51 subunit beta ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,988,512...43,992,939
Ensembl chr15:62,268,738...62,277,160 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 severity ISO RGD PMID:29344181 RGD:151361284 NCBI chr16:68,512,407...68,552,763 JBrowse link
G SLC9A9 solute carrier family 9 member A9 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 3:140,292,336...140,875,991
Ensembl chr 3:147,980,965...148,466,151 		JBrowse link
G SLTM SAFB like transcription modulator ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:37,848,629...37,903,221
Ensembl chr15:56,158,460...56,211,695 		JBrowse link
G SMAD3 SMAD family member 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185 		JBrowse link
G SMAD4 SMAD family member 4 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:28492532 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359 		JBrowse link
G SMAD6 SMAD family member 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:45,648,709...45,728,821
Ensembl chr15:63,923,379...64,001,154 		JBrowse link
G SMAD7 SMAD family member 7 susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 3 OMIM
ClinVar		 PMID:17934461 PMID:18372901 PMID:18372905 PMID:25741868 NCBI chr18:42,306,324...42,337,214 JBrowse link
G SMARCC1 SWI/SNF related BAF chromatin remodeling complex subunit C1 ISO RNA:increased expression:colorectum (human) RGD PMID:32606978 RGD:151347862 NCBI chr 3:47,487,948...47,683,623
Ensembl chr 3:48,590,221...48,781,248 		JBrowse link
G SMC2 structural maintenance of chromosomes 2 exacerbates ISO mRNA:decreased expression:colorectum (human) RGD PMID:31357676 RGD:151356956 NCBI chr 9:75,273,163...75,323,486
Ensembl chr 9:103,402,967...103,449,949 		JBrowse link
G SMO smoothened, frizzled class receptor ISO RGD PMID:22901214 RGD:150520174 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 treatment ISO Human cells in mouse model RGD PMID:32682784 RGD:153297782 NCBI chr20:46,321,075...46,328,865
Ensembl chr20:47,384,818...47,390,733 		JBrowse link
G SNAP23 synaptosome associated protein 23 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,456,247...21,494,340
Ensembl chr15:39,612,445...39,650,759 		JBrowse link
G SNAPC5 small nuclear RNA activating complex polypeptide 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:45,440,597...45,446,007
Ensembl chr15:63,712,363...63,720,420 		JBrowse link
G SNUPN snurportin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,508,586...54,536,301
Ensembl chr15:74,102,753...74,126,511 		JBrowse link
G SNX1 sorting nexin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,048,974...43,096,544
Ensembl chr15:61,340,352...61,382,700 		JBrowse link
G SNX22 sorting nexin 22 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,103,990...43,109,802
Ensembl chr15:61,396,185...61,401,937 		JBrowse link
G SNX33 sorting nexin 33 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,556,304...54,570,683
Ensembl chr15:74,151,053...74,159,584 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 disease_progression ISO RGD PMID:27133036 RGD:150573688 NCBI chr16:10,196,432...10,198,205 JBrowse link
G SORD sorbitol dehydrogenase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:23,971,017...24,025,043 JBrowse link
G SOX9 SRY-box transcription factor 9 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr17:66,028,737...66,034,122 JBrowse link
G SPESP1 sperm equatorial segment protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:47,775,405...47,902,786
Ensembl chr15:66,651,277...66,667,511 		JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:23,519,311...23,620,532
Ensembl chr15:41,688,081...41,788,616 		JBrowse link
G SPG21 SPG21 abhydrolase domain containing, maspardin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,902,865...43,929,663
Ensembl chr15:62,187,767...62,213,741 		JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,786,621...19,800,297
Ensembl chr15:38,036,638...38,050,303 		JBrowse link
G SPOP speckle type BTB/POZ protein exacerbates ISO DNA:hypermethylation:promoter (human)
mRNA:decreased expression:colorectum (human)
protein:decreased expression:colorectum (human)		 RGD PMID:26022775 PMID:28032859 PMID:30171794 RGD:11056110 RGD:153298921 RGD:153298926 NCBI chr17:43,685,913...43,765,277
Ensembl chr17:48,417,634...48,440,623 		JBrowse link
G SPPL2A signal peptide peptidase like 2A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:29,660,190...29,718,477
Ensembl chr15:47,997,304...48,055,239 		JBrowse link
G SPRED1 sprouty related EVH1 domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:17,182,976...17,286,566
Ensembl chr15:35,439,762...35,536,565 		JBrowse link
G SPTBN5 spectrin beta, non-erythrocytic 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,789,568...20,839,907 JBrowse link
G SQOR sulfide quinone oxidoreductase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:24,575,863...24,636,798
Ensembl chr15:42,908,532...42,965,538 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO OMIM NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634 		JBrowse link
G SRP14 signal recognition particle 14 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:18,973,826...18,976,946
Ensembl chr15:37,229,658...37,232,729 		JBrowse link
G STARD5 StAR related lipid transfer domain containing 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:60,299,309...60,310,602
Ensembl chr15:79,254,424...79,265,673 		JBrowse link
G STARD9 StAR related lipid transfer domain containing 9 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,537,229...21,681,651
Ensembl chr15:39,692,013...39,836,032 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO OMIM:114500 | OMIM:608812 | OMIM:611469 | OMIM:612229 | OMIM:612230 | OMIM:612231 | OMIM:612232 | OMIM:612589 | OMIM:612590 | OMIM:612591 | OMIM:612592 | OMIM:615083 MouseDO NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067 		JBrowse link
G STIM1 stromal interaction molecule 1 disease_progression
susceptibility		 ISO mRNA,protein:increased expression:colorectum (human)
DNA:SNPs:intron, 3'utr: (rs3794050,rs7934581,rs3750996) (human)		 RGD PMID:25381814 PMID:25531324 PMID:33470690 RGD:152995364 RGD:152995402 RGD:152995405 NCBI chr11:3,726,501...3,954,951
Ensembl chr11:3,840,513...4,065,224 		JBrowse link
G STK33 serine/threonine kinase 33 ISO RGD PMID:30760631 RGD:405096660 NCBI chr11:8,509,927...8,719,411
Ensembl chr11:8,255,960...8,339,134 		JBrowse link
G STOML1 stomatin like 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:52,892,400...52,903,812
Ensembl chr15:71,647,380...71,656,369 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,117,891...53,150,790
Ensembl chr15:72,741,482...72,770,876 		JBrowse link
G STRC stereocilin ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,562,313...22,633,064
Ensembl chr15:40,769,539...40,795,723
Ensembl chr15:40,769,539...40,795,723 		JBrowse link
G TBC1D21 TBC1 domain family member 21 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:52,783,013...52,798,656
Ensembl chr15:71,538,363...71,553,960 		JBrowse link
G TBC1D2B TBC1 domain family member 2B ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:56,923,368...57,006,708
Ensembl chr15:75,874,740...75,972,020 		JBrowse link
G TBX3 T-box transcription factor 3 disease_progression ISO mRNA,protein:increased expression:colorectum (human) RGD PMID:25628943 RGD:151361126 NCBI chr12:112,240,050...112,254,299
Ensembl chr12:115,620,002...115,631,316 		JBrowse link
G TCERG1 transcription elongation regulator 1 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar NCBI chr 5:141,895,031...141,959,180
Ensembl chr 5:147,908,980...147,972,277 		JBrowse link
G TCF12 transcription factor 12 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:35,885,421...36,257,632
Ensembl chr15:54,202,862...54,570,440 		JBrowse link
G TCF3 transcription factor 3 disease_progression ISO DNA:SNP:3' utr:rs1052918 (human)
DNA, mRNA:hypomethylation, increased expression		 RGD PMID:19828471 PMID:23940558 PMID:24454819 PMID:25375219 RGD:13432058 RGD:13432061 RGD:13432062 RGD:13432063 Ensembl chr19:1,582,297...1,622,025 JBrowse link
G TCF7L2 transcription factor 7 like 2 ISO DNA:mutations:multiple (human) RGD PMID:25617745 RGD:13450926 NCBI chr10:109,541,524...109,759,499
Ensembl chr10:112,978,167...113,192,281 		JBrowse link
G TERB2 telomere repeat binding bouquet formation protein 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:23,904,880...23,927,325 JBrowse link
G TET2 tet methylcytosine dioxygenase 2 ISO associated with Neoplasm Metastasis; mRNA:decreased expression:colorectum (human)
mRNA, protein:increased expression:colorectum, CD4 positive T cells (human)
mRNA:increased expression: Blood, peripheral blood mononuclear cells (human)
mRNA:decreased expression:colon (human)		 RGD PMID:26816554 PMID:29875879 PMID:30013992 PMID:30713804 RGD:150429613 RGD:150429655 RGD:150429665 RGD:150429690 NCBI chr 4:97,612,439...97,745,544
Ensembl chr 4:108,269,082...108,358,400 		JBrowse link
G TEX9 testis expressed 9 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:35,211,936...35,428,547
Ensembl chr15:53,649,547...53,713,721 		JBrowse link
G TGFB1 transforming growth factor beta 1 disease_progression ISO protein:decreased expression:plasma RGD PMID:12778073 PMID:15057430 RGD:13432086 RGD:13432088 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G TGFB2 transforming growth factor beta 2 disease_progression
treatment		 ISO RGD PMID:15057430 PMID:19661324 RGD:13432081 RGD:13432086 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041 		JBrowse link
G TGFB3 transforming growth factor beta 3 treatment ISO RGD PMID:12778073 RGD:13432088 NCBI chr14:56,516,697...56,542,097
Ensembl chr14:75,359,505...75,382,412 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 ISO sporadic colorectal cancer;DNA:deletion:exon: (rs11466445) (human) RGD PMID:24880985 RGD:155630638 NCBI chr 9:70,195,007...70,243,514
Ensembl chr 9:98,332,739...98,362,748 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:9590282 PMID:25741868 PMID:28492532 NCBI chr 3:30,536,187...30,623,653
Ensembl chr 3:30,854,460...30,938,856 		JBrowse link
G TGM5 transglutaminase 5 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,193,639...22,227,977
Ensembl chr15:40,349,085...40,382,737 		JBrowse link
G TGM7 transglutaminase 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,237,315...22,263,527
Ensembl chr15:40,392,135...40,409,516 		JBrowse link
G THAP10 THAP domain containing 10 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:49,830,820...49,841,919
Ensembl chr15:68,597,315...68,608,402 		JBrowse link
G THBS1 thrombospondin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:18,521,802...18,538,172
Ensembl chr15:36,776,756...36,793,170 		JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:50,067,560...50,732,761
Ensembl chr15:68,859,819...69,491,696 		JBrowse link
G TICRR TOPBP1 interacting checkpoint and replication regulator ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,270,029...68,322,201
Ensembl chr15:87,476,738...87,528,870 		JBrowse link
G TIPIN TIMELESS interacting protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:45,290,350...45,310,335
Ensembl chr15:63,566,463...63,585,717 		JBrowse link
G TLE3 TLE family member 3, transcriptional corepressor ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:49,000,145...49,050,246
Ensembl chr15:67,770,176...67,817,320 		JBrowse link
G TLN2 talin 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:41,337,084...41,790,949
Ensembl chr15:59,892,920...60,088,414 		JBrowse link
G TLNRD1 talin rod domain containing 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:59,981,991...59,985,055 JBrowse link
G TLR2 toll like receptor 2 susceptibility ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm OMIM
ClinVar		 PMID:25741868 PMID:28492532 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331 		JBrowse link
G TM6SF1 transmembrane 6 superfamily member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:62,467,207...62,498,060
Ensembl chr15:80,995,993...81,025,503 		JBrowse link
G TMC3 transmembrane channel like 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:60,318,800...60,359,642
Ensembl chr15:79,273,709...79,314,223 		JBrowse link
G TMCO5A transmembrane and coiled-coil domains 5A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:16,864,593...16,897,708 JBrowse link
G TMED3 transmembrane p24 trafficking protein 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:58,280,282...58,355,677
Ensembl chr15:77,237,664...77,313,574 		JBrowse link
G TMEM202 transmembrane protein 202 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:51,347,032...51,357,008
Ensembl chr15:70,111,035...70,120,598 		JBrowse link
G TMEM266 transmembrane protein 266 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,972,048...55,117,865
Ensembl chr15:74,638,076...74,708,901 		JBrowse link
G TMEM62 transmembrane protein 62 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,091,408...22,146,419
Ensembl chr15:40,248,952...40,301,280 		JBrowse link
G TMEM87A transmembrane protein 87A ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,164,958...21,227,644
Ensembl chr15:39,325,412...39,386,297 		JBrowse link
G TMOD2 tropomodulin 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:30,690,641...30,757,960
Ensembl chr15:49,035,929...49,079,570 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 severity ISO DNA:SNP:3'utr: (rs6920220) (human) RGD PMID:22843550 RGD:151347611 NCBI chr 6:135,617,465...135,634,085
Ensembl chr 6:139,705,255...139,720,819 		JBrowse link
G TNFAIP8L3 TNF alpha induced protein 8 like 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:30,008,024...30,046,021
Ensembl chr15:48,343,714...48,390,020 		JBrowse link
G TNFSF9 TNF superfamily member 9 ISO protein:decreased expression:colon, rectum, mucosa (human) RGD PMID:16596186 RGD:2317353 NCBI chr19:5,558,021...5,562,901
Ensembl chr19:6,476,941...6,483,352 		JBrowse link
G TNIK TRAF2 and NCK interacting kinase exacerbates
ameliorates		 ISO protein:increased expression:colorectum RGD PMID:26499327 PMID:27562646 RGD:11530847 RGD:151347682 NCBI chr 3:168,067,839...168,466,290
Ensembl chr 3:176,255,547...176,650,795 		JBrowse link
G TP53 tumor protein p53 treatment
no_association		 ISO ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 1 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 12q24 | ClinVar Annotator: match by term: Colorectal cancer | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 12 | ClinVar Annotator: match by term: Familial colorectal cancer | ClinVar Annotator: match by term: Malignant Colorectal Neoplasm
DNA:missense mutation: :p.P72R (human)		 RGD
OMIM
ClinVar		 PMID:1349175 PMID:1565143 PMID:1565144 PMID:1591732 PMID:1631137 More... RGD:14995449 RGD:14995500 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,364,696...22,472,499
Ensembl chr15:40,519,012...40,626,741 		JBrowse link
G TP73 tumor protein p73 susceptibility
exacerbates		 ISO DNA:hypermethylation:promoter: (human)
DNA:SNPs:exon 2:4G>A, 14C>T (rs2273953, rs1801173) (human)
DNA:deletion:intron:IVS1-489_-417del (human)
DNA:SNP:intron:g.3636226T>C (rs747828) (human)		 RGD PMID:14732927 PMID:21672615 PMID:29945573 PMID:30420492 PMID:31090204 RGD:151347580 RGD:151347581 RGD:151347587 RGD:151347588 RGD:151347590 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
G TPM1 tropomyosin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:41,989,239...42,018,520
Ensembl chr15:60,286,587...60,315,530 		JBrowse link
G TRIM69 tripartite motif containing 69 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:23,691,927...23,724,349
Ensembl chr15:41,861,525...41,893,069 		JBrowse link
G TRIP4 thyroid hormone receptor interactor 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,332,107...43,400,522
Ensembl chr15:61,623,584...61,692,963 		JBrowse link
G TRPM1 transient receptor potential cation channel subfamily M member 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:22561515 PMID:25992589 PMID:26493165 PMID:28492532 NCBI chr15:9,492,500...9,653,644
Ensembl chr15:28,530,878...28,690,947 		JBrowse link
G TRPM7 transient receptor potential cation channel subfamily M member 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:29,513,220...29,639,506
Ensembl chr15:47,853,187...47,977,451 		JBrowse link
G TRPV3 transient receptor potential cation channel subfamily V member 3 ISO DNA:snp:exon:c.558A>C rs11078458 (human) RGD PMID:20042636 RGD:7183081 NCBI chr17:3,528,734...3,577,162
Ensembl chr17:3,516,209...3,603,787 		JBrowse link
G TSPAN3 tetraspanin 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:55,976,231...56,001,345
Ensembl chr15:75,564,473...75,574,697 		JBrowse link
G TTBK2 tau tubulin kinase 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,699,674...21,877,481
Ensembl chr15:39,861,102...40,034,982 		JBrowse link
G TTR transthyretin ISO protein:decreased expression:blood serum (human) RGD PMID:21136704 RGD:151664608 NCBI chr18:24,809,707...24,816,713
Ensembl chr18:28,407,893...28,414,960 		JBrowse link
G TUBGCP4 tubulin gamma complex component 4 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,332,076...22,371,360
Ensembl chr15:40,486,665...40,522,996 		JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:20,499,789...20,520,152
Ensembl chr15:38,739,509...38,760,288 		JBrowse link
G UACA uveal autoantigen with coiled-coil domains and ankyrin repeats ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:49,607,308...49,711,188
Ensembl chr15:68,375,939...68,477,395 		JBrowse link
G UBAP1L ubiquitin associated protein 1 like ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:44,033,064...44,047,056 JBrowse link
G UBE2Q2 ubiquitin conjugating enzyme E2 Q2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:54,754,642...54,814,264
Ensembl chr15:74,348,034...74,407,411 		JBrowse link
G UBL7 ubiquitin like 7 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,388,333...53,403,617
Ensembl chr15:73,008,913...73,024,208 		JBrowse link
G UBR1 ubiquitin protein ligase E3 component n-recognin 1 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,899,611...22,064,606
Ensembl chr15:40,060,111...40,221,725 		JBrowse link
G ULK3 unc-51 like kinase 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:53,778,676...53,785,754
Ensembl chr15:73,396,341...73,403,362 		JBrowse link
G UNC13C unc-13 homolog C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:32,914,784...33,563,610 JBrowse link
G USP3 ubiquitin specific peptidase 3 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:42,450,782...42,541,162
Ensembl chr15:60,746,406...60,830,535 		JBrowse link
G USP50 ubiquitin specific peptidase 50 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:29,450,804...29,500,515
Ensembl chr15:47,790,100...47,839,619 		JBrowse link
G USP8 ubiquitin specific peptidase 8 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:29,374,945...29,451,235
Ensembl chr15:47,713,997...47,790,624 		JBrowse link
G VEGFA vascular endothelial growth factor A ameliorates ISO human cells in mouse model
mRNA:increased expression:colorectum (human)		 RGD PMID:21839130 PMID:30789971 RGD:151893289 RGD:152985531 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353 		JBrowse link
G VPS13C vacuolar protein sorting 13 homolog C ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:40,819,512...41,020,644
Ensembl chr15:59,119,001...59,319,619 		JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,836,707...19,846,231
Ensembl chr15:38,086,518...38,095,835 		JBrowse link
G VPS39 VPS39 subunit of HOPS complex ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,113,047...21,162,738
Ensembl chr15:39,273,546...39,323,196 		JBrowse link
G WDR72 WD repeat domain 72 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:32,449,840...32,695,815
Ensembl chr15:50,775,112...51,023,853 		JBrowse link
G WDR73 WD repeat domain 73 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:63,310,497...63,322,064
Ensembl chr15:82,633,080...82,645,833 		JBrowse link
G WDR76 WD repeat domain 76 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,786,956...22,828,496
Ensembl chr15:40,877,721...40,918,519 		JBrowse link
G WDR93 WD repeat domain 93 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,384,395...68,434,212
Ensembl chr15:87,590,676...87,639,820 		JBrowse link
G WHAMM WASP homolog associated with actin, golgi membranes and microtubules ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:62,763,534...62,788,639
Ensembl chr15:80,706,760...80,730,006 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 onset ISO RGD PMID:26013439 PMID:30175821 RGD:21081520 RGD:21081528 NCBI chr17:7,715,897...7,735,873
Ensembl chr17:7,707,221...7,723,394 		JBrowse link
G XIAP X-linked inhibitor of apoptosis ISO mRNA, protein:increased expression:colonic mucosa (human) RGD PMID:27827395 RGD:153344527 NCBI chr  X:113,052,164...113,105,160
Ensembl chr  X:123,232,643...123,278,606 		JBrowse link
G XPO1 exportin 1 ameliorates ISO human cell line in a mouse model RGD PMID:26603256 PMID:33745946 RGD:151665795 RGD:151667439 NCBI chr2A:61,562,372...61,622,841
Ensembl chr2A:62,698,935...62,757,793 		JBrowse link
G XPO5 exportin 5 susceptibility ISO DNA:snp, haplotype:3' utr:c.*659A>C (rs11077) (human) RGD PMID:26147304 RGD:11041733 NCBI chr 6:43,114,408...43,168,113
Ensembl chr 6:44,406,765...44,458,029 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 susceptibility
severity
treatment
disease_progression		 ISO DNA:SNP:: p.R194W (human)
DNA:missense mutation:cds: p.R399Q (human)
DNA:missense mutation:cds: p.R399Q G>A (human)
DNA:missense mutation:exon 10: p.R399Q (human)
DNA:missense mutation:exon 10: p.R399Q (rs25487) (human)
DNA:SNP:exon 10: p.R399Q G>A (human)
DNA:SNP:3'utr: (rs1799782) (human)
DNA:SNP:exon 10: p.R399Q (human)
DNA:SNP:cds: p.R399Q (human)
DNA:SNP:exon 6: C>T p.R194W (human)		 RGD PMID:15800946 PMID:17009149 PMID:22524842 PMID:22549274 PMID:22580644 More... RGD:11353313 RGD:150530641 RGD:150537038 RGD:150537039 RGD:150539454 RGD:150540339 RGD:150540340 RGD:150573706 RGD:150573803 RGD:150573806 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 ISO ClinVar Annotator: match by term: Colorectal cancer ClinVar PMID:28492532 PMID:32235514 NCBI chr 7:144,229,031...144,256,854
Ensembl chr 7:156,378,685...156,406,516 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator treatment ISO human cells in mouse model RGD PMID:32682784 RGD:153297782 NCBI chr11:97,061,367...97,186,961
Ensembl chr11:100,552,424...100,681,301 		JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 ameliorates ISO human cells in mouse model RGD PMID:34974791 RGD:153344629 NCBI chr20:59,575,703...59,596,447
Ensembl chr20:61,116,645...61,135,769 		JBrowse link
G ZFAND6 zinc finger AN1-type containing 6 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:59,023,678...59,107,270
Ensembl chr15:78,048,571...78,115,098 		JBrowse link
G ZFHX3 zinc finger homeobox 3 exacerbates ISO mRNA, protein:increased expression:colorectum (human) RGD PMID:27435776 RGD:151361165 NCBI chr16:51,936,471...52,209,695
Ensembl chr16:72,635,666...72,808,360 		JBrowse link
G ZFYVE19 zinc finger FYVE-type containing 19 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:19,747,606...19,755,185
Ensembl chr15:37,999,283...38,006,744 		JBrowse link
G ZNF106 zinc finger protein 106 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:21,372,911...21,452,149
Ensembl chr15:39,533,822...39,608,427 		JBrowse link
G ZNF280D zinc finger protein 280D ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:35,597,057...35,700,187
Ensembl chr15:53,914,597...53,989,022 		JBrowse link
G ZNF592 zinc finger protein 592 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:63,415,760...63,473,499
Ensembl chr15:82,773,254...82,792,904 		JBrowse link
G ZNF609 zinc finger protein 609 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:43,405,805...43,628,201
Ensembl chr15:61,735,706...61,912,212 		JBrowse link
G ZNF710 zinc finger protein 710 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:68,688,203...68,770,188
Ensembl chr15:87,956,415...87,971,119 		JBrowse link
G ZNF770 zinc finger protein 770 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:13,897,020...13,907,460
Ensembl chr15:32,158,176...32,160,251 		JBrowse link
G ZNF774 zinc finger protein 774 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:69,039,595...69,050,747
Ensembl chr15:88,241,732...88,251,483 		JBrowse link
G ZSCAN2 zinc finger and SCAN domain containing 2 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:63,268,141...63,291,499
Ensembl chr15:82,595,450...82,614,776 		JBrowse link
G ZSCAN29 zinc finger and SCAN domain containing 29 ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:22,322,316...22,331,662
Ensembl chr15:40,476,956...40,486,653 		JBrowse link
G ZWILCH zwilch kinetochore protein ISO ClinVar Annotator: match by term: Familial colorectal cancer ClinVar PMID:28492532 NCBI chr15:45,452,382...45,496,780
Ensembl chr15:63,727,562...63,771,213 		JBrowse link
ascending colon cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Malignant tumor of ascending colon ClinVar PMID:25741868 PMID:28492532 PMID:30093976 NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709 		JBrowse link
G MSH2 mutS homolog 2 ISO ClinVar Annotator: match by term: Malignant tumor of ascending colon ClinVar PMID:9311737 PMID:9718327 PMID:11208710 PMID:11524701 PMID:11601928 More... NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit susceptibility
onset		 ISO DNA:mutations:multiple (human, non-Asian)
DNA:mutations:multiple (human)
DNA:missense mutation:CDS, exon 9:p.P286R (human)		 RGD PMID:27612425 PMID:28404093 PMID:33125191 RGD:151347640 RGD:151347649 RGD:151347651 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G RNF43 ring finger protein 43 exacerbates ISO DNA:nonsense mutation, frameshift mutations:CDS:multiple (human) RGD PMID:32236609 RGD:151361217 NCBI chr17:52,420,516...52,492,813
Ensembl chr17:57,276,761...57,347,748 		JBrowse link
colon adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase disease_progression ISO mRNA:decreased expression:colon (human)
human cells in mouse model		 RGD PMID:30842415 RGD:153002829 NCBI chr 3:43,580,752...43,612,637
Ensembl chr 3:44,640,215...44,669,885 		JBrowse link
G ANXA7 annexin A7 ISO protein:decreased expression:colon RGD PMID:17708571 RGD:2292654 NCBI chr10:69,923,353...69,962,980
Ensembl chr10:72,381,447...72,420,749 		JBrowse link
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Colon adenocarcinoma ClinVar PMID:24033266 PMID:24728327 PMID:25741868 PMID:27978560 PMID:28492532 NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709 		JBrowse link
G ARID1A AT-rich interaction domain 1A disease_progression ISO protein:decreased expression:colorectum (human) RGD PMID:26980037 RGD:126790569 NCBI chr 1:25,960,868...26,047,057
Ensembl chr 1:27,018,616...27,103,239 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator susceptibility ISO DNA:frameshift mutation: ; RGD PMID:9020077 RGD:734633 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
G BCL2 BCL2 apoptosis regulator treatment ISO human cells in mouse model RGD PMID:32504672 RGD:125097526 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G BTK Bruton tyrosine kinase ISO mRNA:decreased expression:colon (human) RGD PMID:31402962 RGD:151347853 NCBI chr  X:90,551,874...90,588,786
Ensembl chr  X:100,684,017...100,725,187 		JBrowse link
G CA12 carbonic anhydrase 12 disease_progression ISO RGD PMID:35847888 RGD:153352327 NCBI chr15:42,270,188...42,328,952
Ensembl chr15:60,565,592...60,624,008 		JBrowse link
G CACNA1D calcium voltage-gated channel subunit alpha1 D disease_progression ISO protein:increased expression:colon (human) RGD PMID:29079724 RGD:152177516 NCBI chr 3:53,432,189...53,751,347
Ensembl chr 3:54,495,952...54,970,444 		JBrowse link
G CALR calreticulin ISO RGD PMID:18812201 RGD:150521683 NCBI chr19:12,501,013...12,506,909
Ensembl chr19:13,242,900...13,249,416 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 ameliorates ISO human cells in a mouse model RGD PMID:28486105 RGD:153323299 NCBI chr12:6,701,004...6,738,621
Ensembl chr12:6,619,089...6,656,076 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ameliorates ISO mouse cell line in a mouse model
human cells in a mouse model		 RGD PMID:24898549 PMID:29436396 PMID:32304779 RGD:150524289 RGD:150524290 RGD:150524303 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415 		JBrowse link
G CSF2 colony stimulating factor 2 treatment ISO RGD PMID:10830715 RGD:10450245 NCBI chr 5:127,496,951...127,499,325
Ensembl chr 5:133,660,775...133,663,146 		JBrowse link
G CTNNB1 catenin beta 1 ISO DNA:mutation RGD PMID:16886601 RGD:1599637 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 ISO mRNA:increased expression:colonic mucosa (human)
mRNA:increased expression:colon (human)		 RGD PMID:27793774 PMID:33791222 RGD:151665173 RGD:151665790 NCBI chr20:50,500,103...50,520,487
Ensembl chr20:51,721,685...51,742,716 		JBrowse link
G DAXX death domain associated protein ISO protein:decreased expression:colon: RGD PMID:16569639 RGD:9587838 NCBI chr 6:32,890,846...32,895,307
Ensembl chr 6:34,004,543...34,008,717 		JBrowse link
G EEF2 eukaryotic translation elongation factor 2 ISO protein:increased expression:colon(human) RGD PMID:19360331 RGD:153298969 NCBI chr19:3,000,608...3,009,918
Ensembl chr19:3,950,772...3,960,172 		JBrowse link
G FECH ferrochelatase ISO mRNA:decreased expression:colon RGD PMID:28075030 RGD:14700888 NCBI chr18:50,934,520...50,977,132
Ensembl chr18:54,273,527...54,312,378 		JBrowse link
G FOSL1 FOS like 1, AP-1 transcription factor subunit ISO protein:increased expression:colon (human) RGD PMID:22419013 RGD:153344572 NCBI chr11:61,252,513...61,261,032
Ensembl chr11:64,581,841...64,589,304 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO protein:increased expression:colon (human) RGD PMID:22419013 RGD:153344572 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397 		JBrowse link
G FOXA1 forkhead box A1 ISO mRNA:decreased expression:colon RGD PMID:32839292 RGD:151665753 NCBI chr14:18,347,284...18,352,705 JBrowse link
G GATA1 GATA binding protein 1 ISO RGD PMID:31069596 RGD:149735196 NCBI chr  X:41,088,724...41,092,190
Ensembl chr  X:48,945,394...48,953,126 		JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:20616616 RGD:10402080 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G IL21 interleukin 21 treatment ISO RGD PMID:17695518 RGD:127285540 NCBI chr 4:114,795,979...114,806,936
Ensembl chr 4:125,943,495...125,951,915 		JBrowse link
G JAK2 Janus kinase 2 treatment
ameliorates		 ISO Human cell in mouse model
human cells in mouse model		 RGD PMID:22050790 PMID:32504672 RGD:125097526 RGD:127285665 NCBI chr 9:4,820,303...4,971,867
Ensembl chr 9:5,006,271...5,156,626 		JBrowse link
G KDM6A lysine demethylase 6A ISO DNA:hypermethylation RGD PMID:33174323 RGD:150429730 NCBI chr  X:37,313,000...37,548,630
Ensembl chr  X:45,127,382...45,362,029 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A ISO DNA:SNP:intron: (rs7217728) (human) RGD PMID:22121102 RGD:153323313 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B ISO DNA:SNPs:introns: (rs6503691, rs7218653) (human) RGD PMID:22121102 RGD:153323313 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G LOX lysyl oxidase ameliorates ISO RGD PMID:21282564 RGD:150520218 NCBI chr 5:117,450,833...117,464,957
Ensembl chr 5:123,234,662...123,248,717 		JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 ISO human cell line and gene in a mouse model RGD PMID:18436711 RGD:155630593 NCBI chr19:7,205,124...7,215,776
Ensembl chr19:8,057,598...8,066,512 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 ISO RGD PMID:24691442 RGD:13210775 NCBI chr22:3,883,119...3,990,368
Ensembl chr22:20,365,487...20,450,335 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 ISO RGD PMID:24691442 RGD:13210775 Ensembl chr16:30,489,362...30,498,017 JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase ISO mRNA:decreased expression:colon (rat) RGD PMID:16886601 RGD:1599637 NCBI chr10:126,059,701...126,365,850
Ensembl chr10:130,305,485...130,609,422 		JBrowse link
G MMP2 matrix metallopeptidase 2 ISO protein:increased expression:colon (human) RGD PMID:22419013 RGD:153344572 NCBI chr16:35,711,866...35,738,881
Ensembl chr16:54,812,694...54,844,279 		JBrowse link
G MMP9 matrix metallopeptidase 9 ISO protein:increased expression:colon (human) RGD PMID:22419013 RGD:153344572 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129 		JBrowse link
G MSH6 mutS homolog 6 ISO ClinVar Annotator: match by term: Colon adenocarcinoma ClinVar PMID:25741868 NCBI chr2A:47,901,591...47,926,662
Ensembl chr2A:48,824,350...48,849,779 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor exacerbates ISO human cell line in a mouse model RGD PMID:18538140 RGD:150521533 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572 		JBrowse link
G NAIP NLR family apoptosis inhibitory protein exacerbates ISO mRNA:increased expression:colon (human) RGD PMID:31964418 RGD:153344516 NCBI chr 5:44,345,623...44,401,358
Ensembl chr 5:45,920,125...45,973,937 		JBrowse link
G NOS2 nitric oxide synthase 2 ISO protein:increased expression:colon (human) RGD PMID:22419013 RGD:153344572 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 ISO mRNA:decreased expression:colon: RGD PMID:19737405 RGD:11556207 NCBI chr 9:48,480,607...48,943,331
Ensembl chr 9:74,745,761...75,220,502 		JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase ISO RGD PMID:6722784 RGD:5135276 NCBI chr17:43,389,389...43,409,454
Ensembl chr17:48,121,606...48,141,720 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO DNA:mutation RGD PMID:17575153 RGD:5685670 NCBI chr 3:176,182,765...176,272,024
Ensembl chr 3:184,355,785...184,441,977 		JBrowse link
G PIK3R3 phosphoinositide-3-kinase regulatory subunit 3 treatment ISO RGD PMID:24632606 RGD:13432053 NCBI chr 1:45,345,946...45,481,031
Ensembl chr 1:46,700,153...46,792,920 		JBrowse link
G RAC1 Rac family small GTPase 1 treatment ISO mRNA:alternative form RGD PMID:10597294 PMID:19561401 RGD:13432049 RGD:13432051 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RAD54L RAD54 like ISO ClinVar Annotator: match by term: Colon adenocarcinoma ClinVar PMID:10362365 NCBI chr 1:45,549,586...45,581,711
Ensembl chr 1:46,905,598...46,936,259 		JBrowse link
G RNASEL ribonuclease L severity ISO RGD PMID:23567782 RGD:40902808 NCBI chr 1:158,092,346...158,108,026
Ensembl chr 1:161,741,645...161,760,045 		JBrowse link
G RNASET2 ribonuclease T2 ISO human cells in mouse model RGD PMID:30842415 RGD:153002829 NCBI chr 6:164,895,396...164,923,008
Ensembl chr 6:169,872,780...169,899,599 		JBrowse link
G SLC22A18 solute carrier family 22 member 18 ameliorates ISO mRNA:decreased expression:colorectum (human) RGD PMID:26196590 RGD:11522474 NCBI chr11:2,927,586...2,950,801
Ensembl chr11:2,956,086...2,978,958 		JBrowse link
G SMC2 structural maintenance of chromosomes 2 severity ISO human cell line in a mouse model RGD PMID:23095742 RGD:151356955 NCBI chr 9:75,273,163...75,323,486
Ensembl chr 9:103,402,967...103,449,949 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ameliorates ISO RGD PMID:21282564 RGD:150520218 NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634 		JBrowse link
G SRSF4 serine and arginine rich splicing factor 4 ISO mRNA:decreased expression:colon mucosa (human) RGD PMID:9865741 RGD:11039405 NCBI chr 1:28,418,297...28,452,595
Ensembl chr 1:29,444,269...29,478,035 		JBrowse link
G SRSF5 serine and arginine rich splicing factor 5 ISO mRNA:decreased expression:colon mucosa (human) RGD PMID:9865741 RGD:11039405 NCBI chr14:50,320,820...50,365,650
Ensembl chr14:69,230,730...69,236,596 		JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 ISO mRNA:decreased expression:colon mucosa (human) RGD PMID:9865741 RGD:11039405 NCBI chr20:39,795,659...39,801,864
Ensembl chr20:40,888,560...40,891,853 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 ISO DNA:SNPs:introns: (rs2280232, rs4327257) (human) RGD PMID:22121102 RGD:153323313 NCBI chr2B:78,270,642...78,316,074
Ensembl chr2B:196,186,906...196,232,280 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 treatment ISO human cells in mouse model
DNA:SNPs:introns: (rs12949918, rs6503695) (human)		 RGD PMID:22121102 PMID:32504672 RGD:125097526 RGD:153323313 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067 		JBrowse link
G STAT6 signal transducer and activator of transcription 6 ISO DNA:SNP:3' utr: (rs324015) (human) RGD PMID:22121102 RGD:153323313 Ensembl chr12:32,068,679...32,085,099 JBrowse link
G TERT telomerase reverse transcriptase treatment ISO RGD PMID:19903903 RGD:11038656 Ensembl chr 5:1,300,960...1,338,872 JBrowse link
G TET2 tet methylcytosine dioxygenase 2 ISO mRNA:increased expression:colorectum, Cancer Stem-like Cells (human) RGD PMID:31057717 RGD:150429686 NCBI chr 4:97,612,439...97,745,544
Ensembl chr 4:108,269,082...108,358,400 		JBrowse link
G TGFB1 transforming growth factor beta 1 disease_progression ISO RGD PMID:9019169 RGD:13432089 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G TP73 tumor protein p73 ISO mRNA:increased expression:colon (human) RGD PMID:30420492 RGD:151347580 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 ameliorates
severity		 ISO human cell line in a mouse model RGD PMID:28856538 PMID:29296225 RGD:151665195 RGD:151665199 NCBI chr 8:98,904,557...99,064,121
Ensembl chr 8:101,067,435...101,224,913 		JBrowse link
G VEGFC vascular endothelial growth factor C ISO mRNA:increased expression:colon RGD PMID:18424890 RGD:2315488 NCBI chr 4:168,870,941...168,999,160
Ensembl chr 4:181,104,737...181,236,030 		JBrowse link
colon cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER3 alkaline ceramidase 3 severity ISO associated with colitis RGD PMID:26938296 RGD:35673322 NCBI chr11:71,911,204...72,077,528
Ensembl chr11:75,557,846...75,717,586 		JBrowse link
G ACTR1A actin related protein 1A ISO RGD PMID:26422100 RGD:13831341 NCBI chr10:99,082,765...99,106,305
Ensembl chr10:102,547,695...102,570,766 		JBrowse link
G ACVR2A activin A receptor type 2A ISO DNA:mutation:polyadenine tract RGD PMID:14988818 RGD:2301065 NCBI chr2B:11,933,683...12,020,287
Ensembl chr2B:152,253,826...152,288,385 		JBrowse link
G ADA adenosine deaminase susceptibility ISO DNA:polymorphisms,haplotypes: :
protein:increased activity:colon		 RGD PMID:15820509 PMID:20590444 RGD:152995263 RGD:152995289 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 treatment
severity		 ISO mRNA:increased expression:colon (human)
human cells in mouse model		 RGD PMID:31932471 PMID:33360052 RGD:127229954 RGD:152995462 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G AKT3 AKT serine/threonine kinase 3 treatment ISO RGD PMID:20811704 RGD:13209140 NCBI chr 1:219,107,482...219,463,140
Ensembl chr 1:224,480,784...224,824,838 		JBrowse link
G APAF1 apoptotic peptidase activating factor 1 treatment ISO RGD PMID:22369161 RGD:13703116 NCBI chr12:96,224,515...96,311,246
Ensembl chr12:99,637,622...99,726,939 		JBrowse link
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Colon cancer ClinVar PMID:22675565 PMID:25741868 PMID:26467025 PMID:26692440 PMID:26837502 More... NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709 		JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO mRNA, protein:decreased expression:colon RGD PMID:12020819 RGD:625559 NCBI chr12:7,777,734...7,793,960
Ensembl chr12:7,939,262...7,944,203 		JBrowse link
G ARID1A AT-rich interaction domain 1A treatment ISO human cells in mouse model RGD PMID:26069190 RGD:11072938 NCBI chr 1:25,960,868...26,047,057
Ensembl chr 1:27,018,616...27,103,239 		JBrowse link
G ATG101 autophagy related 101 disease_progression ISO RGD PMID:34315829 RGD:153350092 NCBI chr12:36,685,897...36,693,613
Ensembl chr12:37,462,533...37,470,062 		JBrowse link
G ATM ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Colon cancer ClinVar NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G ATR ATR serine/threonine kinase disease_progression ISO DNA:mutations: : RGD PMID:17879369 RGD:150340676 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261 		JBrowse link
G AURKA aurora kinase A ISO ClinVar Annotator: match by term: Colon cancer, susceptibility to ClinVar PMID:9771714 PMID:10511710 PMID:12881723 PMID:25741868 NCBI chr20:52,707,757...52,730,579
Ensembl chr20:53,994,881...54,017,339 		JBrowse link
G AXIN1 axin 1 treatment ISO RGD PMID:28032729 RGD:150530464 Ensembl chr16:278,239...337,891 JBrowse link
G BAD BCL2 associated agonist of cell death treatment ISO RGD PMID:21214291 RGD:10053668 NCBI chr11:59,626,981...59,641,824
Ensembl chr11:62,971,808...62,986,257 		JBrowse link
G BCL2 BCL2 apoptosis regulator treatment ISO RGD PMID:21214291 RGD:10053668 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G BIK BCL2 interacting killer treatment ISO RGD PMID:17636408 RGD:14394819 NCBI chr22:23,994,256...24,014,244
Ensembl chr22:42,207,149...42,213,022 		JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 disease_progression ISO protein:increased expression:colon (human) RGD PMID:22751125 RGD:152998979 NCBI chr11:97,269,778...97,290,112
Ensembl chr11:100,763,274...100,785,194 		JBrowse link
G BRCA1 BRCA1 DNA repair associated susceptibility
disease_progression		 ISO DNA:mutation RGD PMID:7907678 PMID:33583275 RGD:126925959 RGD:1599497 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRD4 bromodomain containing 4 ISO RGD PMID:22120039 RGD:9586351 NCBI chr19:14,768,239...14,805,770
Ensembl chr19:15,754,930...15,789,600 		JBrowse link
G CALR calreticulin treatment
ameliorates		 ISO human cell line and recombinant gene in a mouse model
protein:increased expression:colon (human)		 RGD PMID:17187072 PMID:19256344 PMID:19881547 PMID:20480531 PMID:29573475 RGD:150521684 RGD:150521692 RGD:150521693 RGD:150521694 RGD:150521701 NCBI chr19:12,501,013...12,506,909
Ensembl chr19:13,242,900...13,249,416 		JBrowse link
G CASP3 caspase 3 disease_progression ISO protein:decreased expression:colon RGD PMID:17805550 PMID:23979166 RGD:13209142 RGD:13209143 NCBI chr 4:176,793,190...176,815,023
Ensembl chr 4:189,018,422...189,040,185 		JBrowse link
G CASP7 caspase 7 disease_progression ISO RGD PMID:23979166 RGD:13209143 NCBI chr10:110,273,318...110,324,800
Ensembl chr10:113,707,780...113,758,626 		JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISO RGD PMID:21268133 RGD:5135051 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384 		JBrowse link
G CCND2 cyclin D2 ISO mRNA:increased expression:colon RGD PMID:15059925 RGD:2289181 NCBI chr12:4,385,957...4,417,602
Ensembl chr12:4,309,272...4,335,551 		JBrowse link
G CCNG2 cyclin G2 ISO mRNA:decreased expression:colon,rectum (human) RGD PMID:27982046 RGD:151361200 NCBI chr 4:47,034,502...47,044,475
Ensembl chr 4:52,870,692...52,882,330 		JBrowse link
G CD274 CD274 molecule treatment ISO RGD PMID:28424330 RGD:41410791 NCBI chr 9:5,269,270...5,289,629
Ensembl chr 9:5,454,391...5,474,402 		JBrowse link
G CDH1 cadherin 1 ISO ClinVar Annotator: match by term: Malignant tumor of colon ClinVar PMID:15235021 PMID:16924464 PMID:17545690 PMID:19268661 PMID:20233471 More... NCBI chr16:49,108,745...49,206,347
Ensembl chr16:68,502,584...68,596,488 		JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A disease_progression ISO mRNA,protein:increased expression:colonic mucosa: RGD PMID:24845563 RGD:9587457 NCBI chr19:3,425,182...3,461,646
Ensembl chr19:4,375,379...4,409,339 		JBrowse link
G CHEK2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Colon cancer ClinVar PMID:15095295 PMID:21244692 PMID:22114986 PMID:22419737 PMID:22862163 More... NCBI chr22:9,757,038...9,811,171 JBrowse link
G CHKA choline kinase alpha ISO mRNA, protein:increased expression:colon (rat) RGD PMID:10622531 RGD:10401869 NCBI chr11:63,134,776...63,202,516
Ensembl chr11:66,444,406...66,510,221 		JBrowse link
G CHUK component of inhibitor of nuclear factor kappa B kinase complex ISO protein:increased expression:colon (human) RGD PMID:16774932 RGD:153305944 NCBI chr10:96,794,228...96,835,449
Ensembl chr10:100,280,490...100,316,918 		JBrowse link
G COL6A3 collagen type VI alpha 3 chain ISO protein:increased expression:serum (human) RGD PMID:32245981 RGD:401900121 NCBI chr2B:124,554,478...124,644,482 JBrowse link
G CRIPTO cripto, EGF-CFC family member treatment ISO RGD PMID:15173016 RGD:11561894 NCBI chr 3:46,473,282...46,478,454
Ensembl chr 3:47,577,949...47,583,126 		JBrowse link
G CRP C-reactive protein ISO protein:increased expression:serum: RGD PMID:23008118 RGD:6903278 NCBI chr 1:135,062,102...135,064,402 JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 susceptibility ISO mRNA:increased expression:colon (human)
DNA:SNPs:introns: (rs4809960, rs6022999) (human)
DNA:SNP:intron: IVS4-66T>G, (rs4809958) (human)
DNA:SNPs:multiple (human)		 RGD PMID:16180015 PMID:19706847 PMID:28811712 PMID:31740231 RGD:151361183 RGD:151665174 RGD:151665177 RGD:151665338 NCBI chr20:50,500,103...50,520,487
Ensembl chr20:51,721,685...51,742,716 		JBrowse link
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 treatment ISO RGD PMID:30720227 RGD:14700924 Ensembl chr10:134,839,025...134,852,719 JBrowse link
G CYSLTR1 cysteinyl leukotriene receptor 1 ISO associated with Experimental Colitis RGD PMID:28410235 RGD:40903055 NCBI chr  X:67,412,410...67,469,366
Ensembl chr  X:77,524,455...77,525,468 		JBrowse link
G EFTUD2 elongation factor Tu GTP binding domain containing 2 ameliorates ISO associated with colitis; RGD PMID:31278373 RGD:155791667 NCBI chr17:12,423,198...12,472,462
Ensembl chr17:12,595,715...12,644,147 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:19141699 RGD:8694174 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit disease_progression ISO RGD PMID:19773751 RGD:126781702 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 treatment ISO human cells in mouse model RGD PMID:17599042 RGD:150520062 NCBI chr 5:172,386,443...172,400,271
Ensembl chr 5:179,454,995...179,467,605 		JBrowse link
G GPX1 glutathione peroxidase 1 treatment ISO associated with Inflammation
mRNA, protein:increased expression:colon (human)		 RGD PMID:21868509 PMID:28045589 RGD:152995480 RGD:152995496 NCBI chr 3:49,280,038...49,281,455
Ensembl chr 3:50,360,947...50,361,826 		JBrowse link
G GPX2 glutathione peroxidase 2 treatment ISO associated with Inflammation RGD PMID:28045589 RGD:152995480 NCBI chr14:45,522,558...45,526,678 JBrowse link
G GPX3 glutathione peroxidase 3 disease_progression ISO associated with Experimental Colitis RGD PMID:23221387 RGD:151665510 NCBI chr 5:146,447,939...146,456,476 JBrowse link
G GPX4 glutathione peroxidase 4 disease_progression ISO mRNA, protein:increased expression:colon (human) RGD PMID:21868509 RGD:152995496 NCBI chr19:20,904...23,828 JBrowse link
G GSK3B glycogen synthase kinase 3 beta treatment ISO RGD PMID:22561258 RGD:10045586 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771 		JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO DNA:hypermethylation:promoter (human) RGD PMID:12527896 RGD:2317633 NCBI chr16:15,195,577...15,297,155
Ensembl chr16:23,067,554...23,168,609 		JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 ISO protein:increased expression:colon (human) RGD PMID:16774932 RGD:153305944 NCBI chr14:82,700,881...82,707,020
Ensembl chr14:102,519,699...102,576,723 		JBrowse link
G HTRA1 HtrA serine peptidase 1 disease_progression ISO DNA:SNP:cds: (rs1049331) (human) RGD PMID:32218415 RGD:152985527 NCBI chr10:119,030,409...119,083,682
Ensembl chr10:122,441,098...122,494,733 		JBrowse link
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta ISO associated with Obesity;protein:increased expression:large intestine mucosa RGD PMID:20143392 RGD:7495781 NCBI chr 8:41,515,613...41,576,229
Ensembl chr 8:38,960,594...39,020,971 		JBrowse link
G IL10 interleukin 10 no_association ISO DNA:SNP: :rs1800896 (human)
DNA:SNP:promoter:-592C>A (rs1800872) (human)		 RGD PMID:27468578 RGD:11534627 NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371 		JBrowse link
G IL32 interleukin 32 disease_progression ISO mRNA:splice variant:colon (human) RGD PMID:26824417 RGD:150340748 NCBI chr16:2,007,018...2,023,757
Ensembl chr16:3,179,637...3,203,929 		JBrowse link
G IL33 interleukin 33 treatment ISO associated with colitis; RGD PMID:31407335 RGD:39939040 NCBI chr 9:6,027,014...6,069,540
Ensembl chr 9:6,234,178...6,248,624 		JBrowse link
G IL7R interleukin 7 receptor disease_progression ISO DNA:deletion: : RGD PMID:29755661 RGD:126779581 NCBI chr 5:74,489,188...74,516,330
Ensembl chr 5:79,769,859...79,792,612 		JBrowse link
G JAK2 Janus kinase 2 treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr 9:4,820,303...4,971,867
Ensembl chr 9:5,006,271...5,156,626 		JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit ISO RNA:decreased expression:colon (human) RGD PMID:11751871 RGD:151347667 NCBI chr19:12,353,760...12,355,598
Ensembl chr19:13,097,931...13,098,974 		JBrowse link
G KDM3A lysine demethylase 3A severity ISO human gene in a mouse model RGD PMID:19858293 RGD:9590225 NCBI chr2A:86,497,531...86,548,772 JBrowse link
G KDM5C lysine demethylase 5C ISO mRNA:increased expression:colon (human) RGD PMID:33042830 RGD:151361176 NCBI chr  X:45,377,609...45,440,025
Ensembl chr  X:53,515,886...53,548,785 		JBrowse link
G LALBA lactalbumin alpha onset ISO RGD PMID:25036966 RGD:38599174 NCBI chr12:40,178,422...40,180,897
Ensembl chr12:41,055,189...41,057,565 		JBrowse link
G LCN2 lipocalin 2 treatment ISO RGD PMID:20043115 RGD:2316492 NCBI chr 9:99,259,278...99,274,494
Ensembl chr 9:127,940,799...127,944,798 		JBrowse link
G LGALS3 galectin 3 treatment ISO RGD PMID:28032729 RGD:150530464 NCBI chr14:35,715,850...35,732,263
Ensembl chr14:53,990,023...54,006,412 		JBrowse link
G LIF LIF interleukin 6 family cytokine ameliorates ISO human cells in mouse model RGD PMID:29899555 RGD:151356919 NCBI chr22:11,276,576...11,282,972
Ensembl chr22:29,078,862...29,095,608 		JBrowse link
G LOC100976982 solute carrier organic anion transporter family member 1B3 disease_progression ISO mRNA:increased expression:colon (human) RGD PMID:25625007 RGD:152995427 NCBI chr12:65,386,042...65,492,240 JBrowse link
G LOC100980965 zinc-alpha-2-glycoprotein severity ISO protein:increased expression:colon,serum RGD PMID:25561225 RGD:153350136 NCBI chr 7:91,999,717...92,009,066
Ensembl chr 7:105,432,782...105,442,219 		JBrowse link
G LRP1B LDL receptor related protein 1B ISO human cells in a mouse moel RGD PMID:28408316 RGD:150429777 NCBI chr2B:17,702,178...19,611,567
Ensembl chr2B:144,382,759...146,221,243 		JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 ISO mRNA:splice variant:exon 2: (human) RGD PMID:32601196 RGD:155230826 NCBI chr19:7,205,124...7,215,776
Ensembl chr19:8,057,598...8,066,512 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 treatment ISO RGD PMID:19876598 RGD:401976467 NCBI chr22:3,883,119...3,990,368
Ensembl chr22:20,365,487...20,450,335 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 susceptibility ISO DNA:SNP:intron: (rs10807156) (human)
DNA:SNP:intron: (rs851016) (human)		 RGD PMID:23027623 PMID:23859041 RGD:13217411 RGD:150573807 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114 		JBrowse link
G MCL1 MCL1 apoptosis regulator, BCL2 family member ameliorates ISO human cells in mouse model RGD PMID:29899555 RGD:151356919 NCBI chr 1:125,918,760...125,923,952
Ensembl chr 1:129,566,827...129,572,086 		JBrowse link
G MKI67 marker of proliferation Ki-67 treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr10:124,684,336...124,714,143
Ensembl chr10:128,936,037...128,962,555 		JBrowse link
G MLH1 mutL homolog 1 disease_progression ISO ClinVar Annotator: match by term: Colon cancer | ClinVar Annotator: match by term: Malignant tumor of colon RGD
ClinVar		 PMID:8566964 PMID:8574961 PMID:8592341 PMID:08808596 PMID:9311737 More... RGD:126790577 NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801 		JBrowse link
G MMP3 matrix metallopeptidase 3 treatment ISO RGD PMID:20043115 RGD:2316492 NCBI chr11:97,776,729...97,784,549
Ensembl chr11:101,267,566...101,275,354 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease susceptibility ISO DNA:SNP:3'utr: (rs2155209) (human) RGD PMID:26735576 RGD:151361212 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G MSH2 mutS homolog 2 no_association
disease_progression		 ISO DNA:SNP:intron:IVS10+12G>A (human)
ClinVar Annotator: match by term: Colon cancer
DNA, mRNA:loss of heterogeneity, increased expression: :colon		 RGD
ClinVar		 PMID:25741868 PMID:28411881 PMID:28492532 PMID:29715107 PMID:33357406 RGD:126790554 RGD:126790577 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MTOR mechanistic target of rapamycin kinase treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841 		JBrowse link
G MTUS1 microtubule associated scaffold protein 1 ISO mRNA, protein:decreased expression:colon (human) RGD PMID:19956880 RGD:2317016 NCBI chr 8:16,863,307...17,020,684 JBrowse link
G MUC2 mucin 2, oligomeric mucus/gel-forming ISO protein:decreased expression:colon
mRNA:decreased expression:colon		 RGD PMID:17847023 PMID:20459814 RGD:7349368 RGD:7349371 NCBI chr11:1,106,716...1,144,489
Ensembl chr11:1,143,625...1,169,741 		JBrowse link
G MUTYH mutY DNA glycosylase ISO ClinVar Annotator: match by term: Colon cancer | ClinVar Annotator: match by term: Malignant tumor of colon ClinVar PMID:9536098 PMID:11818965 PMID:12606733 PMID:12853198 PMID:12917422 More... NCBI chr 1:44,632,102...44,643,292
Ensembl chr 1:45,990,588...46,002,645 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor ameliorates ISO RGD PMID:23184679 RGD:150520021 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572 		JBrowse link
G NANOG Nanog homeobox treatment ISO RGD PMID:22641368 RGD:7240527 NCBI chr12:7,913,037...7,919,715 JBrowse link
G NCOA6 nuclear receptor coactivator 6 ISO DNA:amplification:cds (human) RGD PMID:10567404 RGD:9590137 NCBI chr20:31,044,339...31,154,798
Ensembl chr20:32,170,583...32,247,167 		JBrowse link
G NF1 neurofibromin 1 ISO mRNA:increased expression:colon (human) RGD PMID:15840687 RGD:150429699 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 ISO RGD PMID:19424637 RGD:5133247 NCBI chr16:50,090,696...50,106,495
Ensembl chr16:69,470,288...69,489,731 		JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 ISO RNA:increased expression:colon (human) RGD PMID:28710032 RGD:153344627 NCBI chr 1:175,625,140...175,775,955
Ensembl chr 1:179,934,573...180,083,607 		JBrowse link
G PIK3R2 phosphoinositide-3-kinase regulatory subunit 2 ISO RGD PMID:18663744 RGD:13432043 NCBI chr19:17,632,265...17,649,664
Ensembl chr19:18,611,179...18,624,177 		JBrowse link
G PIK3R5 phosphoinositide-3-kinase regulatory subunit 5 ISO DNA:hypermethylation RGD PMID:15123805 RGD:13432047 NCBI chr17:42,686,483...42,773,668
Ensembl chr17:47,475,201...47,507,282 		JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin ISO ClinVar Annotator: match by term: Malignant tumor of colon ClinVar PMID:12846734 PMID:14741187 PMID:15805161 PMID:21493627 PMID:25646624 More... NCBI chr 6:51,166,516...51,635,057
Ensembl chr 6:52,435,462...52,903,309 		JBrowse link
G PLCG1 phospholipase C gamma 1 treatment ISO RGD PMID:7812955 RGD:151356942 NCBI chr20:37,477,077...37,515,854
Ensembl chr20:38,572,709...38,615,145 		JBrowse link
G PLK4 polo like kinase 4 ISO protein:increased expression:colon RGD PMID:26439168 RGD:11075990 NCBI chr 4:120,044,423...120,062,544
Ensembl chr 4:131,349,562...131,371,054 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component ISO ClinVar Annotator: match by term: Colon cancer ClinVar PMID:21376568 PMID:24362816 PMID:25741868 PMID:28492532 NCBI chr 7:7,433,031...7,459,560
Ensembl chr 7:6,167,403...6,202,984 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit ISO ClinVar Annotator: match by term: Malignant tumor of colon ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit ISO ClinVar Annotator: match by term: Colon cancer ClinVar PMID:25741868 PMID:28492532 NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO DNA:frameshift mutation:c.472delA (human) RGD PMID:10394368 RGD:1601444 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISO RGD PMID:20622004 RGD:5685669 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505 		JBrowse link
G PTEN phosphatase and tensin homolog ISO mRNA:decreased expression:colon (human) RGD PMID:21806946 RGD:12859043 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO mRNA:decreased expression:colon mucosa (rat) RGD PMID:15247185 RGD:9850265 NCBI chr 1:70,076,610...70,271,475
Ensembl chr 1:72,059,441...72,254,063 		JBrowse link
G PTGIS prostaglandin I2 synthase exacerbates ISO RGD PMID:26611322 RGD:11536046 NCBI chr20:45,841,238...45,905,641
Ensembl chr20:46,905,665...46,971,612 		JBrowse link
G PTPN13 protein tyrosine phosphatase non-receptor type 13 treatment ISO RGD PMID:29899829 RGD:152975627 NCBI chr 4:78,893,598...79,118,745
Ensembl chr 4:89,623,271...89,847,616 		JBrowse link
G PTPRT protein tyrosine phosphatase receptor type T exacerbates ISO RGD PMID:20133777 PMID:27447856 RGD:150520184 RGD:150520192 NCBI chr20:38,399,267...39,526,776
Ensembl chr20:39,502,794...40,317,701 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein susceptibility ISO DNA:SNPs:3'utr: (rs1051669, rs11571475) (human) RGD PMID:26735576 RGD:151361212 NCBI chr12:986,372...1,066,708
Ensembl chr12:946,825...985,668 		JBrowse link
G RICTOR RPTOR independent companion of MTOR complex 2 severity ISO protein:increased expression:colon (human)
human cells in mouse model
mRNA:increased expression:colon (human)		 RGD PMID:20226010 PMID:24244675 PMID:31932471 RGD:152995458 RGD:152995462 RGD:152995494 NCBI chr 5:71,299,215...71,435,290
Ensembl chr 5:76,389,130...76,469,830 		JBrowse link
G RNASET2 ribonuclease T2 ISO RGD PMID:32197460 RGD:153002804 NCBI chr 6:164,895,396...164,923,008
Ensembl chr 6:169,872,780...169,899,599 		JBrowse link
G RNF43 ring finger protein 43 disease_progression ISO mRNA:increased expression:colon (human) RGD PMID:26350900 RGD:11053240 NCBI chr17:52,420,516...52,492,813
Ensembl chr17:57,276,761...57,347,748 		JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr17:53,958,807...54,014,752
Ensembl chr17:58,799,069...58,853,653 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 treatment ISO RGD PMID:19900191 RGD:151361295 NCBI chr16:68,512,407...68,552,763 JBrowse link
G SMAD2 SMAD family member 2 treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr18:41,213,001...41,309,902
Ensembl chr18:44,580,905...44,668,530 		JBrowse link
G SMAD4 SMAD family member 4 treatment
severity		 ISO mRNA:decreased expression:colon (human) RGD PMID:31932471 PMID:33360052 RGD:127229954 RGD:152995462 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359 		JBrowse link
G SMO smoothened, frizzled class receptor ISO protein:increased expression:colon RGD PMID:23098507 RGD:150340555 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ameliorates ISO RGD PMID:19469017 RGD:150573701 NCBI chr16:10,196,432...10,198,205 JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase disease_progression ISO DNA:nonsense mutation
ClinVar Annotator: match by term: Colon cancer, advanced		 RGD
ClinVar		 PMID:7678609 PMID:9988270 PMID:25157968 RGD:150521542 RGD:1601371 NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634 		JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 ISO protein:increased expression:colon (human) RGD PMID:17310252 RGD:11038730 NCBI chr17:52,083,676...52,087,454
Ensembl chr17:56,937,295...56,944,425 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 treatment
ameliorates		 ISO human cells in mouse model RGD PMID:29899555 PMID:33360052 RGD:127229954 RGD:151356919 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067 		JBrowse link
G TFF3 trefoil factor 3 ISO protein:decreased expression:colon RGD PMID:17847023 RGD:7349371 NCBI chr21:28,627,191...28,631,341
Ensembl chr21:41,948,696...41,952,268 		JBrowse link
G TGFB1 transforming growth factor beta 1 treatment ISO RGD PMID:33360052 RGD:127229954 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G TGFB3 transforming growth factor beta 3 disease_progression ISO RGD PMID:18360718 RGD:13432091 NCBI chr14:56,516,697...56,542,097
Ensembl chr14:75,359,505...75,382,412 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 ISO DNA:mutation:polyadenine tract RGD PMID:14988818 RGD:2301065 NCBI chr 3:30,536,187...30,623,653
Ensembl chr 3:30,854,460...30,938,856 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 treatment ISO associated with Experimental Colitis
mRNA,protein:increased expression:colon (human)
protein:decreased expression:colon (human)		 RGD PMID:24099634 PMID:27991929 RGD:151347529 RGD:151347624 NCBI chr 6:135,617,465...135,634,085
Ensembl chr 6:139,705,255...139,720,819 		JBrowse link
G TNFRSF10A TNF receptor superfamily member 10a disease_progression ISO mRNA:increased expression:colon RGD PMID:20428773 RGD:2325778 NCBI chr 8:22,440,502...22,476,790
Ensembl chr 8:19,378,547...19,414,724 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 exacerbates ISO mRNA:increased expression:colon (human) RGD PMID:29441938 RGD:151665201 NCBI chr 8:98,904,557...99,064,121
Ensembl chr 8:101,067,435...101,224,913 		JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:21268133 RGD:5135051 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353 		JBrowse link
G WNT5A Wnt family member 5A treatment ISO RGD PMID:28032729 RGD:150530464 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 ISO ClinVar Annotator: match by term: Colon cancer ClinVar PMID:23054243 PMID:25637381 PMID:25741868 PMID:27233470 PMID:28492532 More... NCBI chr 7:144,229,031...144,256,854
Ensembl chr 7:156,378,685...156,406,516 		JBrowse link
colon carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 ISO ClinVar Annotator: match by term: Colon carcinoma ClinVar PMID:17611497 PMID:18256540 PMID:18392055 PMID:18504432 PMID:18611285 More... NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G AOPEP aminopeptidase O (putative) ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25058500 PMID:27165003 NCBI chr 9:65,825,138...66,188,001
Ensembl chr 9:93,986,951...94,311,201 		JBrowse link
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma		 ClinVar PMID:1316610 PMID:1324223 PMID:1338764 PMID:1338904 PMID:1528264 More... NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709 		JBrowse link
G ATM ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Carcinoma of colon
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma		 ClinVar PMID:8845835 PMID:9792409 PMID:9887333 PMID:10425038 PMID:10817650 More... NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G AXIN2 axin 2 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:11017067 PMID:15042511 PMID:21416598 PMID:21472303 PMID:24033266 More... NCBI chr17:59,476,336...59,509,358
Ensembl chr17:64,688,416...64,720,086 		JBrowse link
G BARD1 BRCA1 associated RING domain 1 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:19197335 PMID:20077502 PMID:25741868 PMID:26350354 PMID:26467025 More... NCBI chr2B:101,984,287...102,068,523
Ensembl chr2B:220,456,972...220,541,145 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:9020077 PMID:9453486 PMID:9531611 PMID:10984511 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
G BCL10 BCL10 immune signaling adaptor ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:9989495 NCBI chr 1:117,823,388...117,834,314 JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:12417513 PMID:14526373 PMID:15235019 PMID:18823382 PMID:23399955 More... NCBI chr10:83,185,040...83,353,239
Ensembl chr10:86,837,469...86,912,912 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase treatment ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma RGD
ClinVar		 PMID:12068308 PMID:12198537 PMID:12447372 PMID:12460918 PMID:12460919 More... RGD:11567267 NCBI chr 7:132,651,908...132,855,422
Ensembl chr 7:145,138,510...145,327,115 		JBrowse link
G BRCA1 BRCA1 DNA repair associated ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25741868 PMID:26295337 PMID:26467025 PMID:28492532 PMID:31911673 More... NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCA2 BRCA2 DNA repair associated ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:11030418 PMID:12491487 PMID:15744044 PMID:15937982 PMID:15983021 More... NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G BRIP1 BRCA1 interacting DNA helicase 1 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:16116423 PMID:16280053 PMID:17033622 PMID:18483852 PMID:21964575 More... NCBI chr17:55,786,568...55,973,366
Ensembl chr17:60,901,073...61,083,462 		JBrowse link
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:9521327 NCBI chr2A:91,393,317...91,433,579
Ensembl chr2A:111,793,236...111,858,392 		JBrowse link
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:9521327 PMID:24728327 PMID:25741868 PMID:28492532 NCBI chr15:19,095,383...19,155,557
Ensembl chr15:37,350,826...37,410,648 		JBrowse link
G C9H11orf65 chromosome 9 C11orf65 homolog ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:8845835 PMID:17910737 PMID:19404735 PMID:20305132 PMID:21665257 More... NCBI chr11:103,195,244...103,352,211
Ensembl chr11:106,670,277...106,817,886 		JBrowse link
G CALR calreticulin treatment ISO human cells and recombinant protein in a mouse model RGD PMID:9858521 RGD:150521687 NCBI chr19:12,501,013...12,506,909
Ensembl chr19:13,242,900...13,249,416 		JBrowse link
G CDH1 cadherin 1 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:25583476 PMID:25741868 PMID:26467025 PMID:28492532 PMID:30287823 More... NCBI chr16:49,108,745...49,206,347
Ensembl chr16:68,502,584...68,596,488 		JBrowse link
G CHEK2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:14612911 PMID:15087378 PMID:17721994 PMID:18571837 PMID:21244692 More... NCBI chr22:9,757,038...9,811,171 JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein ISO RGD PMID:16391854 RGD:7488899 NCBI chr22:3,141,147...3,177,448
Ensembl chr22:19,632,359...19,668,858 		JBrowse link
G CTNNB1 catenin beta 1 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:9065402 PMID:9294210 PMID:10192393 PMID:23033978 PMID:24614104 More... NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 treatment ISO RGD PMID:30381616 RGD:27095891 NCBI chr 4:48,182,355...48,184,733
Ensembl chr 4:54,020,204...54,022,606 		JBrowse link
G CXCL6 C-X-C motif chemokine ligand 6 disease_progression ISO RGD PMID:18413816 RGD:5135268 NCBI chr 4:50,357,643...50,359,822
Ensembl chr 4:56,189,961...56,192,402 		JBrowse link
G DCC DCC netrin 1 receptor ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:8188295 NCBI chr18:45,717,924...46,913,998
Ensembl chr18:49,268,812...50,255,155 		JBrowse link
G DLC1 DLC1 Rho GTPase activating protein ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:10649492 NCBI chr 8:12,282,190...12,809,770
Ensembl chr 8:9,037,742...9,460,233 		JBrowse link
G EFNB2 ephrin B2 ameliorates ISO human cells in mouse model RGD PMID:15083195 RGD:153305907 NCBI chr13:87,629,831...87,675,652
Ensembl chr13:106,770,296...106,815,548 		JBrowse link
G EP300 E1A binding protein p300 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma ClinVar PMID:10700188 PMID:25741868 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G EPCAM epithelial cell adhesion molecule ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar NCBI chr2A:47,490,748...47,508,418
Ensembl chr2A:48,413,520...48,432,038 		JBrowse link
G FANCC FA complementation group C ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25058500 PMID:27165003 NCBI chr 9:66,201,581...66,418,229
Ensembl chr 9:94,329,971...94,477,198 		JBrowse link
G FANCE FA complementation group E ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25058500 PMID:27165003 PMID:28492532 PMID:34687117 NCBI chr 6:35,012,076...35,027,018 JBrowse link
G FGFR3 fibroblast growth factor receptor 3 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma ClinVar PMID:1908846 PMID:7649548 PMID:7670477 PMID:7702086 PMID:7773297 More... NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692 		JBrowse link
G FLCN folliculin ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:12843323 PMID:15805188 PMID:15852235 PMID:16199547 PMID:18234728 More... NCBI chr17:34,057,127...34,081,637
Ensembl chr17:38,988,518...39,013,160 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25741868 NCBI chr13:9,584,850...9,779,542 JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand treatment ISO RGD PMID:10842197 RGD:11049504 NCBI chr19:46,486,169...46,499,008 JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25741868 PMID:28492532 NCBI chr 5:175,804,728...175,852,703
Ensembl chr 5:183,115,856...183,149,006 		JBrowse link
G FOXA1 forkhead box A1 disease_progression ISO RGD PMID:33296605 RGD:151665748 NCBI chr14:18,347,284...18,352,705 JBrowse link
G HPGD 15-hydroxyprostaglandin dehydrogenase ISO DNA:::adenoviral delivery of human gene in mouse model of colon cancer RGD PMID:19494278 RGD:5688759 NCBI chr 4:166,716,386...166,749,225
Ensembl chr 4:178,949,137...178,982,910 		JBrowse link
G IGF2R insulin like growth factor 2 receptor ISO protein:increased expression:serum: RGD PMID:29940770 RGD:14985218 NCBI chr 6:157,852,565...157,990,049
Ensembl chr 6:162,878,661...162,997,762 		JBrowse link
G KDR kinase insert domain receptor treatment ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma RGD
ClinVar		 PMID:12415261 RGD:126925192 NCBI chr 4:68,813,894...68,861,018
Ensembl chr 4:75,377,375...75,427,109 		JBrowse link
G KMT2D lysine methyltransferase 2D ISO protein:increased expression:colon RGD PMID:20433758 RGD:150523761 NCBI chr12:39,689,463...39,731,904
Ensembl chr12:40,575,083...40,608,661 		JBrowse link
G LOC100976982 solute carrier organic anion transporter family member 1B3 ISO mRNA,protein:increased expression:colon (human) RGD PMID:19074900 RGD:152995419 NCBI chr12:65,386,042...65,492,240 JBrowse link
G MCC MCC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar NCBI chr 5:108,382,066...108,845,503
Ensembl chr 5:114,184,907...114,647,847 		JBrowse link
G MLH1 mutL homolog 1 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma		 ClinVar PMID:7757073 PMID:8521398 PMID:8571956 PMID:8574961 PMID:8581513 More... NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801 		JBrowse link
G MLH3 mutL homolog 3 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:11317354 PMID:28492532 PMID:35292633 NCBI chr14:55,568,033...55,603,672
Ensembl chr14:74,413,319...74,445,749 		JBrowse link
G MSH2 mutS homolog 2 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:187139 PMID:625353 PMID:3258778 PMID:3616036 PMID:6096739 More... NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MSH6 mutS homolog 6 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma		 ClinVar PMID:1548301 PMID:3049887 PMID:8838326 PMID:9345684 PMID:9536098 More... NCBI chr2A:47,901,591...47,926,662
Ensembl chr2A:48,824,350...48,849,779 		JBrowse link
G MUTYH mutY DNA glycosylase ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma		 ClinVar PMID:517270 PMID:9536098 PMID:11051386 PMID:11295288 PMID:11818965 More... NCBI chr 1:44,632,102...44,643,292
Ensembl chr 1:45,990,588...46,002,645 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor treatment ISO mouse cell line in a mouse model RGD PMID:20823152 RGD:150520170 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572 		JBrowse link
G NBN nibrin ISO ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:11325820 PMID:14559852 PMID:15338273 PMID:16474176 PMID:16810201 More... NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G NRAS NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Colon carcinoma ClinVar PMID:2674680 PMID:3102434 PMID:8120410 PMID:16291983 PMID:18390968 More... NCBI chr 1:87,837,146...87,850,013
Ensembl chr 1:122,890,505...122,903,585 		JBrowse link
G PALB2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Carcinoma of colon
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma		 ClinVar PMID:3040479 PMID:18053174 PMID:21285249 PMID:21365267 PMID:21618343 More... NCBI chr16:14,470,367...14,507,841
Ensembl chr16:23,855,535...23,892,117 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:24033266 PMID:25741868 PMID:28492532 NCBI chr 4:69,639,081...69,709,870
Ensembl chr 4:76,199,382...76,271,097 		JBrowse link
G PDGFRL platelet derived growth factor receptor like ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:7898930 NCBI chr 8:16,795,211...16,862,637
Ensembl chr 8:13,747,164...13,816,294 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma		 ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr 3:176,182,765...176,272,024
Ensembl chr 3:184,355,785...184,441,977 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:285143 PMID:2402700 PMID:9536098 PMID:9683794 PMID:10037723 More... NCBI chr 7:7,433,031...7,459,560
Ensembl chr 7:6,167,403...6,202,984 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:15322521 PMID:15766587 PMID:19966286 PMID:25032700 PMID:25637381 More... NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma
ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma		 ClinVar PMID:15766587 PMID:16199547 PMID:23230001 PMID:23263490 PMID:23447401 More... NCBI chr12:129,975,750...130,038,402
Ensembl chr12:134,695,976...134,758,650 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma ClinVar PMID:10394368 PMID:25741868 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060 		JBrowse link
G PRF1 perforin 1 ISO RGD PMID:22420317 RGD:6482822 NCBI chr10:67,071,141...67,078,057
Ensembl chr10:69,597,574...69,603,070 		JBrowse link
G PTEN phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:10555148 PMID:12372056 PMID:21194675 PMID:21659347 PMID:21956414 More... NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
G PTPN12 protein tyrosine phosphatase non-receptor type 12 ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:7509295 NCBI chr 7:69,457,158...69,560,111
Ensembl chr 7:83,268,834...83,371,120 		JBrowse link
G PTPRJ protein tyrosine phosphatase receptor type J ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:12089527 PMID:25741868 PMID:33116287 NCBI chr11:47,941,134...48,130,538
Ensembl chr11:48,613,761...48,670,494 		JBrowse link
G RAD51C RAD51 paralog C ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:16199547 PMID:20400964 PMID:21537932 PMID:21990120 PMID:22538716 More... NCBI chr17:52,769,446...52,808,467
Ensembl chr17:57,621,552...57,660,701 		JBrowse link
G RAD51D RAD51 paralog D ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25741868 PMID:28492532 NCBI chr17:21,666,236...21,693,886
Ensembl chr17:21,958,212...21,978,406 		JBrowse link
G RAD54B RAD54 homolog B ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:10362364 NCBI chr 8:90,995,229...91,098,149
Ensembl chr 8:92,939,535...93,034,060 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:25058500 PMID:27165003 NCBI chr 6:109,104,341...109,291,268
Ensembl chr 6:113,181,759...113,367,625 		JBrowse link
G SMAD4 SMAD family member 4 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:9582123 PMID:10398437 PMID:11920286 PMID:15235019 PMID:16152648 More... NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO protein:increased phosphorylating activity:colon mucosa RGD PMID:2436227 RGD:150521541 NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634 		JBrowse link
G STK11 serine/threonine kinase 11 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:14623934 PMID:15121768 PMID:25186949 PMID:25741868 PMID:26467025 More... Ensembl chr19:1,188,537...1,210,677 JBrowse link
G TGFB1 transforming growth factor beta 1 disease_progression ISO RGD PMID:11166150 RGD:13432074 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G TGFB2 transforming growth factor beta 2 disease_progression ISO RGD PMID:10416598 PMID:11166150 RGD:13432074 RGD:13432084 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041 		JBrowse link
G TLR3 toll like receptor 3 ISO protein:increased expression:colon RGD PMID:23467704 RGD:21079438 NCBI chr 4:178,238,352...178,256,264
Ensembl chr 4:190,446,487...190,462,728 		JBrowse link
G TNFRSF17 TNF receptor superfamily member 17 ISO RGD PMID:11104810 RGD:2317311 NCBI chr16:10,903,795...10,906,542
Ensembl chr16:12,333,254...12,336,219 		JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A ISO protein:increased expression:serum (human) RGD PMID:1655258 RGD:5131434 NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B ISO protein:increased expression:serum (human) RGD PMID:1655258 RGD:5131434 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646 		JBrowse link
G TOE1 target of EGR1, exonuclease ISO ClinVar Annotator: match by term: Carcinoma of colon ClinVar PMID:18271935 PMID:25741868 PMID:28492532 NCBI chr 1:44,642,812...44,646,808
Ensembl chr 1:46,000,713...46,005,279 		JBrowse link
G TP53 tumor protein p53 ISO ClinVar Annotator: match by term: Carcinoma of colon | ClinVar Annotator: match by term: Colon carcinoma | ClinVar Annotator: match by term: Colonic carcinoma ClinVar PMID:1565143 PMID:1683921 PMID:1978757 PMID:7887414 PMID:8023157 More... NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TYMS thymidylate synthetase ISO human tumor in mouse model RGD PMID:17848948 RGD:5133430 NCBI chr18:13,653,085...13,668,478
Ensembl chr18:17,295,182...17,310,320 		JBrowse link
G UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 ISO mRNA:increased expression:colonic mucosa (human) RGD PMID:8541345 RGD:11352739 NCBI chr19:18,040,946...18,052,445 JBrowse link
G VEGFA vascular endothelial growth factor A treatment ISO RGD PMID:18657413 RGD:15003195 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353 		JBrowse link
colorectal adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 susceptibility ISO DNA:polymorphism: :3435C>T (human) RGD PMID:16107775 RGD:2312343 NCBI chr 7:79,497,536...79,706,277
Ensembl chr 7:93,147,950...93,243,238 		JBrowse link
G ARPC2 actin related protein 2/3 complex subunit 2 ISO mRNA:decreased expression:colonic mucosa (human) RGD PMID:25107436 RGD:11049173 NCBI chr2B:105,478,035...105,513,665
Ensembl chr2B:224,076,356...224,111,643 		JBrowse link
G BCL2L1 BCL2 like 1 ISO protein:increased expression:colonic mucosa (human) RGD PMID:8625322 RGD:11353854 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585 		JBrowse link
G BIRC7 baculoviral IAP repeat containing 7 ISO RGD PMID:21122381 RGD:13217408 NCBI chr20:59,618,530...59,623,612
Ensembl chr20:61,157,302...61,161,932 		JBrowse link
G BORCS5 BLOC-1 related complex subunit 5 susceptibility ISO DNA:SNP:3'utr: (rs3803098) A>G (human) RGD PMID:27354594 RGD:152177496 NCBI chr12:12,380,071...12,488,735
Ensembl chr12:12,749,104...12,857,043 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase disease_progression ISO RGD PMID:24500602 RGD:11567230 NCBI chr 7:132,651,908...132,855,422
Ensembl chr 7:145,138,510...145,327,115 		JBrowse link
G BRD8 bromodomain containing 8 disease_progression ISO RGD PMID:19787264 RGD:9587763 NCBI chr 5:133,535,321...133,557,304
Ensembl chr 5:139,652,112...139,690,468 		JBrowse link
G CA12 carbonic anhydrase 12 severity ISO RGD PMID:10666387 RGD:155226866 NCBI chr15:42,270,188...42,328,952
Ensembl chr15:60,565,592...60,624,008 		JBrowse link
G CCDC17 coiled-coil domain containing 17 susceptibility ISO DNA:SNP:3'utr: (rs2275085) T>C (human) RGD PMID:27354594 RGD:152177496 NCBI chr 1:44,921,301...44,926,090
Ensembl chr 1:46,279,879...46,283,930 		JBrowse link
G CD44 CD44 molecule (IN blood group) disease_progression ISO mRNA, protein:splice variant, increased expression:large intestine RGD PMID:16425351 RGD:2289356 NCBI chr11:35,110,732...35,258,238
Ensembl chr11:34,985,634...35,079,009 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 susceptibility ISO DNA:SNPs:enhancers: (rs6013897, rs158552, rs17217119) (human) RGD PMID:28009432 RGD:151665179 NCBI chr20:50,500,103...50,520,487
Ensembl chr20:51,721,685...51,742,716 		JBrowse link
G CYP4F8 cytochrome P450 family 4 subfamily F member 8 susceptibility ISO DNA:SNP:3'utr: (rs2283606) T>C (human) RGD PMID:27354594 RGD:152177496 NCBI chr19:15,134,029...15,150,378
Ensembl chr19:16,118,830...16,133,182 		JBrowse link
G DNMT3B DNA methyltransferase 3 beta susceptibility ISO DNA:SNP: : 39179G>T(human) RGD PMID:19626461 RGD:9589082 NCBI chr20:29,049,993...29,096,957
Ensembl chr20:30,186,069...30,215,487 		JBrowse link
G DOK3 docking protein 3 susceptibility ISO DNA:SNP:3'utr: (rs2279398) (human) RGD PMID:27354594 RGD:152177496 NCBI chr 5:172,803,094...172,812,613
Ensembl chr 5:179,864,910...179,874,190 		JBrowse link
G EMX2 empty spiracles homeobox 2 exacerbates ISO mRNA:decreased expression:colorectal mucosa (human) RGD PMID:28830374 RGD:153323301 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 severity ISO RGD PMID:16507107 RGD:126781766 NCBI chr12:32,811,533...32,834,958
Ensembl chr12:33,063,434...33,084,994 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor ISO mRNA:decreased expression:colorectum (human) RGD PMID:22966016 RGD:155598682 NCBI chr10:44,703,720...44,784,948 JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit disease_progression ISO DNA:SNP: rs3757441 (human) RGD PMID:21926398 RGD:126779594 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726 		JBrowse link
G FAM151A family with sequence similarity 151 member A susceptibility ISO DNA:SNP:3'utr: (rs11206394) G>C (human) RGD PMID:27354594 RGD:152177496 NCBI chr 1:53,881,993...53,896,957
Ensembl chr 1:55,471,375...55,485,454 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 treatment ISO human cell line in a mouse model RGD PMID:31255687 RGD:155663557 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815 		JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 severity ISO DNA:polymorphisms:multiple RGD PMID:33075166 RGD:149735513 NCBI chr13:9,283,747...9,381,553
Ensembl chr13:27,627,178...27,723,940 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8264230 RGD:13210753 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766 		JBrowse link
G GATA6 GATA binding protein 6 severity ISO human cells in a mouse model RGD PMID:24452072 RGD:13208874 NCBI chr18:15,411,764...15,444,402 JBrowse link
G GJB3 gap junction protein beta 3 susceptibility ISO DNA:SNP:3'utr: (rs9118) C>G (human) RGD PMID:27354594 RGD:152177496 NCBI chr 1:34,048,136...34,053,298 JBrowse link
G GPX4 glutathione peroxidase 4 susceptibility ISO DNA:SNP:3' utr:c.718T>C (human) RGD PMID:18850177 RGD:152998895 NCBI chr19:20,904...23,828 JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:21609933 RGD:13210767 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771 		JBrowse link
G GSTM1 glutathione S-transferase mu 1 ISO RGD PMID:12421502 RGD:14700996 Ensembl chr 1:127,979,238...128,010,411 JBrowse link
G HPCA hippocalcin severity ISO mRNA, protein:increased expression:colon carcinoma (human) RGD PMID:22696308 RGD:9693683 NCBI chr 1:32,176,465...32,185,133
Ensembl chr 1:33,363,673...33,371,524 		JBrowse link
G IER2 immediate early response 2 disease_progression ISO protein:increased expression:colon (human) RGD PMID:22120713 RGD:153323322 NCBI chr19:12,714,804...12,718,213
Ensembl chr19:13,452,239...13,452,910 		JBrowse link
G IL16 interleukin 16 susceptibility ISO DNA:SNP:3'utr: (rs1131445) T>C (human) RGD PMID:27354594 RGD:152177496 NCBI chr15:60,181,827...60,299,406
Ensembl chr15:79,122,988...79,250,861 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:8264230 RGD:13210753 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit ISO protein:increased expression:colorectal mucosa (human) RGD PMID:10874008 RGD:151347670 NCBI chr19:12,353,760...12,355,598
Ensembl chr19:13,097,931...13,098,974 		JBrowse link
G KCNH1 potassium voltage-gated channel subfamily H member 1 severity ISO DNA:amplification: (human) RGD PMID:17289873 RGD:9693694 NCBI chr 1:186,233,881...186,696,509
Ensembl chr 1:191,107,256...191,562,766 		JBrowse link
G KDR kinase insert domain receptor severity
treatment		 ISO protein:altered phosphorylation:colon RGD PMID:25372416 PMID:26325365 RGD:11529678 RGD:126848811 NCBI chr 4:68,813,894...68,861,018
Ensembl chr 4:75,377,375...75,427,109 		JBrowse link
G KMT2B lysine methyltransferase 2B ISO human gene in a mouse model RGD PMID:22713656 RGD:9588601 NCBI chr19:32,647,815...32,668,656
Ensembl chr19:41,382,458...41,402,695 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B disease_progression
ameliorates		 ISO protein:increased expression:colorectum (human)
human cells in a mouse model		 RGD PMID:21826656 PMID:23733954 RGD:11076784 RGD:153298931 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 treatment ISO RGD PMID:25405740 RGD:13210782 NCBI chr22:3,883,119...3,990,368
Ensembl chr22:20,365,487...20,450,335 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 treatment ISO RGD PMID:25405740 RGD:13210782 Ensembl chr16:30,489,362...30,498,017 JBrowse link
G MAPK8 mitogen-activated protein kinase 8 ISO RGD PMID:21122381 RGD:13217408 NCBI chr10:45,806,748...45,936,362 JBrowse link
G MSH2 mutS homolog 2 disease_progression ISO RGD PMID:11604476 RGD:126790556 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor exacerbates ISO RNA:decreased expression:colon (human) RGD PMID:28533893 RGD:150540307 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO protein:increased expression:colorectal mucosa (human) RGD PMID:19198856 RGD:153002579 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 susceptibility ISO DNA:SNP:3'utr: (rs3135499) C>A (human) RGD PMID:27354594 RGD:152177496 NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773 		JBrowse link
G PCSK4 proprotein convertase subtilisin/kexin type 4 susceptibility ISO DNA:SNP:3'utr: (rs1047854) C>T (human) RGD PMID:27354594 RGD:152177496 Ensembl chr19:1,452,924...1,466,438 JBrowse link
G RAB24 RAB24, member RAS oncogene family susceptibility ISO DNA:SNP:3'utr: (rs1128287) C>A (human) RGD PMID:27354594 RGD:152177496 NCBI chr 5:172,603,410...172,605,696
Ensembl chr 5:179,667,583...179,669,864 		JBrowse link
G RAC1 Rac family small GTPase 1 disease_progression ISO mRNA, protein:increased expression:colorectum (human) RGD PMID:30926638 RGD:155230818 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase ISO RGD PMID:21122381 RGD:13217408 NCBI chr 3:12,510,084...12,590,598
Ensembl chr 3:12,853,415...12,932,871 		JBrowse link
G RGS5 regulator of G protein signaling 5 susceptibility ISO DNA:SNP:3'utr: (rs15049) C>A (human) RGD PMID:27354594 RGD:152177496 NCBI chr 1:138,561,940...138,622,698
Ensembl chr 1:142,362,663...142,387,291 		JBrowse link
G RICTOR RPTOR independent companion of MTOR complex 2 disease_progression ISO protein:increased expression:colon (human) RGD PMID:27729429 RGD:152995521 NCBI chr 5:71,299,215...71,435,290
Ensembl chr 5:76,389,130...76,469,830 		JBrowse link
G RNASET2 ribonuclease T2 ISO human cells in mouse model RGD PMID:27014725 RGD:153002831 NCBI chr 6:164,895,396...164,923,008
Ensembl chr 6:169,872,780...169,899,599 		JBrowse link
G RSPH1 radial spoke head component 1 susceptibility ISO DNA:SNP:3'utr: (rs2839531) T>C (human) RGD PMID:27354594 RGD:152177496 NCBI chr21:28,779,994...28,804,130
Ensembl chr21:42,098,212...42,121,610 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 disease_progression ISO RGD PMID:32359697 RGD:151361139 NCBI chr16:68,512,407...68,552,763 JBrowse link
G SMARCB1 SWI/SNF related BAF chromatin remodeling complex subunit B1 disease_progression ISO protein:decreased expression:colon, nucleus RGD PMID:27184481 RGD:127285648 NCBI chr22:4,542,764...4,589,461
Ensembl chr22:22,627,982...22,673,921 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 no_association ISO RGD PMID:25339048 RGD:150573690 NCBI chr16:10,196,432...10,198,205 JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 ISO mRNA:increased expression:colorectum (human) RGD PMID:11358845 RGD:155631271 NCBI chr15:53,117,891...53,150,790
Ensembl chr15:72,741,482...72,770,876 		JBrowse link
G TP53 tumor protein p53 ISO RGD PMID:8264230 RGD:13210753 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TP73 tumor protein p73 exacerbates ISO protein:increased expression:colon (human) RGD PMID:19956069 RGD:151347585 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
G TPRX1 tetrapeptide repeat homeobox 1 susceptibility ISO DNA:SNP:3'utr: (rs12462695) C>A (human) RGD PMID:27354594 RGD:152177496 NCBI chr19:44,795,775...44,813,621 JBrowse link
G TPST1 tyrosylprotein sulfotransferase 1 susceptibility ISO DNA:SNP:3'utr: (rs3757417) G>T (human) RGD PMID:27354594 RGD:152177496 NCBI chr 7:59,707,582...59,856,809
Ensembl chr 7:73,271,704...73,419,642 		JBrowse link
G TYMS thymidylate synthetase ISO protein:increased activity:colon (rat) RGD PMID:10226549 RGD:2317418 NCBI chr18:13,653,085...13,668,478
Ensembl chr18:17,295,182...17,310,320 		JBrowse link
G UTP23 UTP23 small subunit processome component susceptibility ISO DNA:missense mutation:cds:p.P215Q (rs16888728) (human) RGD PMID:26553438 RGD:11041896 NCBI chr 8:113,441,014...113,462,103
Ensembl chr 8:115,984,167...116,066,606 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 treatment ISO associated with Neoplasm Metastasis; DNA:missense mutation:cds: p.R399Q, c.1196G>A (human) RGD PMID:19908066 RGD:150573820 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
Colorectal Cancer 10 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNC3 potassium voltage-gated channel subfamily C member 3 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 10 ClinVar PMID:28492532 NCBI chr19:47,275,213...47,296,809 JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor ameliorates ISO RGD PMID:33177648 RGD:150519912 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572 		JBrowse link
G MYH14 myosin heavy chain 14 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 10 ClinVar PMID:28492532 NCBI chr19:47,169,303...47,273,815
Ensembl chr19:56,081,644...56,177,902 		JBrowse link
G NAPSA napsin A aspartic peptidase ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 10 ClinVar PMID:28492532 NCBI chr19:47,321,581...47,333,307
Ensembl chr19:56,225,421...56,232,822 		JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 ISO ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 10 ClinVar PMID:28492532 NCBI chr19:47,340,077...47,346,737
Ensembl chr19:56,243,124...56,250,024 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit ISO ClinVar Annotator: match by term: COLORECTAL CANCER, SUSCEPTIBILITY TO, ON CHROMOSOME 19q | ClinVar Annotator: match by term: Colorectal cancer 10 | ClinVar Annotator: match by term: Colorectal cancer, susceptibility to, 10 OMIM
ClinVar		 PMID:7704014 PMID:9536098 PMID:10074927 PMID:10541966 PMID:12376507 More... NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
colorectal carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR2 actin related protein 2 severity ISO protein:increased expression:colonic mucosa (human) RGD PMID:14990971 RGD:11570560 NCBI chr2A:65,289,675...65,333,219
Ensembl chr2A:66,413,011...66,456,857 		JBrowse link
G ACTR3 actin related protein 3 severity ISO protein:increased expression:colonic mucosa (human) RGD PMID:14990971 RGD:11570560 NCBI chr2B:827,184...900,424
Ensembl chr2B:114,373,392...114,445,729 		JBrowse link
G AGER advanced glycosylation end-product specific receptor treatment ISO RGD PMID:22467055 RGD:7245559 NCBI chr 6:31,828,363...31,831,981
Ensembl chr 6:32,708,251...32,711,641 		JBrowse link
G AKAP12 A-kinase anchoring protein 12 treatment ISO RGD PMID:21918680 RGD:14348959 NCBI chr 6:149,058,350...149,176,710
Ensembl chr 6:153,757,081...153,873,925 		JBrowse link
G ANTXR1 ANTXR cell adhesion molecule 1 treatment ISO RGD PMID:19528090 RGD:9684940 NCBI chr2A:69,054,253...69,290,554
Ensembl chr2A:70,175,982...70,412,454 		JBrowse link
G ARID1A AT-rich interaction domain 1A onset ISO protein:decreased expression:colorectum (human) RGD PMID:24925223 RGD:126790632 NCBI chr 1:25,960,868...26,047,057
Ensembl chr 1:27,018,616...27,103,239 		JBrowse link
G AXIN2 axin 2 ISO ClinVar Annotator: match by term: Colorectal carcinoma ClinVar PMID:15042511 PMID:16199547 PMID:21416598 PMID:25741868 PMID:28492532 NCBI chr17:59,476,336...59,509,358
Ensembl chr17:64,688,416...64,720,086 		JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 ameliorates ISO human cell line in a mouse model RGD PMID:30630498 RGD:152999008 NCBI chr11:97,269,778...97,290,112
Ensembl chr11:100,763,274...100,785,194 		JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger ISO RGD PMID:14732230 RGD:1580058 NCBI chr10:22,477,755...22,487,894
Ensembl chr10:22,857,776...22,863,479 		JBrowse link
G BRCA1 BRCA1 DNA repair associated ISO RGD PMID:11497291 RGD:126925969 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCA2 BRCA2 DNA repair associated ISO RGD PMID:11497291 RGD:126925969 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G BRD7 bromodomain containing 7 severity ISO mRNA,protein:decreased expression:colon: RGD PMID:23215825 RGD:9586444 NCBI chr16:30,576,449...30,630,409
Ensembl chr16:49,463,048...49,514,386 		JBrowse link
G CA12 carbonic anhydrase 12 disease_progression ISO RGD PMID:27688658 RGD:155226860 NCBI chr15:42,270,188...42,328,952
Ensembl chr15:60,565,592...60,624,008 		JBrowse link
G CA2 carbonic anhydrase 2 disease_progression ISO RGD PMID:27688658 RGD:155226860 NCBI chr 8:81,991,037...82,009,010
Ensembl chr 8:83,597,440...83,632,580 		JBrowse link
G CALU calumenin ISO mRNA:increased expression:colon (human) RGD PMID:18776587 RGD:2316232 NCBI chr 7:120,691,092...120,723,303
Ensembl chr 7:133,223,269...133,247,167 		JBrowse link
G CAT catalase treatment ISO RGD PMID:29229353 RGD:127284843 NCBI chr11:34,413,253...34,446,831
Ensembl chr11:34,289,603...34,323,160 		JBrowse link
G CBX7 chromobox 7 disease_progression ISO mRNA:decreased expression::colorectum: RGD PMID:22041561 RGD:9587355 NCBI chr22:20,037,529...20,059,459
Ensembl chr22:37,854,056...37,876,084 		JBrowse link
G CD59 CD59 molecule (CD59 blood group) ISO RGD PMID:12909127 RGD:1600485 NCBI chr11:33,680,580...33,708,479
Ensembl chr11:33,552,164...33,590,157 		JBrowse link
G CHI3L1 chitinase 3 like 1 severity ISO protein:increased secretion:serum (human) RGD PMID:12124825 RGD:4892637 NCBI chr 1:178,778,081...178,789,704
Ensembl chr 1:183,075,312...183,083,229 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO mRNA:decreased expression:colorectal mucosa (human) RGD PMID:28675510 RGD:150524297 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 disease_progression ISO mRNA,protein:increased expression:colorectum (human) RGD PMID:18803056 RGD:151893518 NCBI chr2B:23,744,271...23,748,106
Ensembl chr2B:140,181,829...140,189,647 		JBrowse link
G EFNB2 ephrin B2 ameliorates ISO human cells in mouse model RGD PMID:26494468 RGD:153300950 NCBI chr13:87,629,831...87,675,652
Ensembl chr13:106,770,296...106,815,548 		JBrowse link
G EP300 E1A binding protein p300 ISO ClinVar Annotator: match by term: Colorectal carcinoma ClinVar PMID:15706485 PMID:24476420 PMID:25741868 PMID:28492532 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor treatment ISO human cell line in a mouse model RGD PMID:28665687 RGD:155260341 NCBI chr10:44,703,720...44,784,948 JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO protein:increased expression:large intestine RGD PMID:30214616 RGD:126779593 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726 		JBrowse link
G FUBP1 far upstream element binding protein 1 ISO mRNA, protein:increased expression:colorectum (human) RGD PMID:25030436 RGD:151361190 NCBI chr 1:77,162,675...77,198,486 JBrowse link
G GPX2 glutathione peroxidase 2 ISO mRNA:increased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr14:45,522,558...45,526,678 JBrowse link
G GPX3 glutathione peroxidase 3 ISO mRNA:decreased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr 5:146,447,939...146,456,476 JBrowse link
G GSTM1 glutathione S-transferase mu 1 ISO RGD PMID:16886896 PMID:26909940 RGD:11564625 RGD:14700936 Ensembl chr 1:127,979,238...128,010,411 JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M disease_progression ISO protein:increased expression:colonic epithelium (human) RGD PMID:24381081 RGD:10054273 NCBI chr19:7,731,828...7,776,101
Ensembl chr19:8,579,211...8,624,029 		JBrowse link
G IFNG interferon gamma ISO RGD PMID:16717119 RGD:150573704 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829 		JBrowse link
G IL2 interleukin 2 treatment ISO RGD PMID:29229353 RGD:127284843 NCBI chr 4:114,637,328...114,642,586
Ensembl chr 4:125,782,563...125,787,984 		JBrowse link
G IL6 interleukin 6 treatment ISO RGD PMID:29229353 RGD:127284843 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G ITGB3 integrin subunit beta 3 severity ISO RGD PMID:11299820 RGD:5112894 NCBI chr17:10,134,450...10,194,596
Ensembl chr17:10,353,111...10,392,382 		JBrowse link
G JAK2 Janus kinase 2 treatment ISO RGD PMID:29229353 RGD:127284843 NCBI chr 9:4,820,303...4,971,867
Ensembl chr 9:5,006,271...5,156,626 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 treatment
ameliorates		 ISO human cell line in a mouse model RGD PMID:23624232 PMID:25548290 PMID:27286263 RGD:151665352 RGD:151665507 RGD:151665508 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114 		JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase ISO DNA:insertion, deletion:exon:c.939_940insA, c.939delA (human) RGD PMID:10637515 RGD:9588975 NCBI chr 3:126,489,125...126,498,034
Ensembl chr 3:133,839,643...133,851,450 		JBrowse link
G MSH3 mutS homolog 3 ISO RGD PMID:9401011 RGD:1625103 NCBI chr 5:34,408,469...34,663,483
Ensembl chr 5:34,719,322...34,938,469 		JBrowse link
G MSH6 mutS homolog 6 ISO RGD PMID:9401011 RGD:1625103 NCBI chr2A:47,901,591...47,926,662
Ensembl chr2A:48,824,350...48,849,779 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor exacerbates
ameliorates		 ISO mRNA:increased expression:colon (human)
human cell line in a mouse model 		RGD PMID:30221070 PMID:31746347 RGD:150519917 RGD:150520167 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ameliorates
disease_progression		 ISO human gene and cell line in a mouse model
protein:increased expression:colorectum, myofibroblast cell, cytoplasm (human)		 RGD PMID:19277704 PMID:25823027 RGD:11085507 RGD:153002577 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NF1 neurofibromin 1 severity ISO protein:increased expression:colorectum (human) RGD PMID:27798892 RGD:150429697 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G PHF6 PHD finger protein 6 ISO mRNA:increased expression:colorectal mucosa (human) RGD PMID:28675510 RGD:150524297 NCBI chr  X:123,521,956...123,578,256
Ensembl chr  X:133,822,260...133,873,990 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha severity ISO DNA:mutations:exons: RGD PMID:17546593 RGD:14402406 NCBI chr 3:176,182,765...176,272,024
Ensembl chr 3:184,355,785...184,441,977 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit exacerbates ISO protein:decreased expression:colorectum (human) RGD PMID:32567205 RGD:151347643 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G PSMB9 proteasome 20S subunit beta 9 ISO protein: decreased expression RGD PMID:14750179 RGD:6483362 NCBI chr 6:32,423,614...32,429,062
Ensembl chr 6:33,539,060...33,564,402 		JBrowse link
G PTPRB protein tyrosine phosphatase receptor type B ISO mRNA:increased expression:colon (human) RGD PMID:31040266 RGD:151361283 NCBI chr12:68,025,973...68,147,613
Ensembl chr12:70,797,843...70,915,308 		JBrowse link
G RAC1 Rac family small GTPase 1 exacerbates
ameliorates		 ISO protein:increased expression:colorectum (human)
protein:increased activity:colorectal mucosa (human)
human cell line in a mouse model		 RGD PMID:23559092 PMID:25529012 PMID:30064309 RGD:153298972 RGD:153350124 RGD:153350139 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RAD21 RAD21 cohesin complex component exacerbates ISO mRNA, protein:increased expression:colorectum (human) RGD PMID:30546056 RGD:150520034 NCBI chr 8:113,520,456...113,549,339
Ensembl chr 8:116,063,503...116,092,421 		JBrowse link
G SELENOH selenoprotein H ISO mRNA:increased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr11:52,980,128...52,981,759
Ensembl chr11:56,450,023...56,450,642 		JBrowse link
G SELENOP selenoprotein P ISO mRNA:decreased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr 5:67,570,087...67,582,192
Ensembl chr 5:72,619,607...72,627,213 		JBrowse link
G SELENOS selenoprotein S ISO mRNA:decreased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr15:79,995,678...80,002,159
Ensembl chr15:99,279,203...99,285,682 		JBrowse link
G SEPHS2 selenophosphate synthetase 2 ISO mRNA:decreased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr16:24,523,111...24,525,390 JBrowse link
G SH2B3 SH2B adaptor protein 3 exacerbates ISO protein:decreased expression:colorectum (human) RGD PMID:31706103 RGD:153297781 NCBI chr12:108,977,344...109,024,029 JBrowse link
G SMAD4 SMAD family member 4 disease_progression ISO RGD PMID:26861460 RGD:21066335 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359 		JBrowse link
G SMARCC1 SWI/SNF related BAF chromatin remodeling complex subunit C1 exacerbates ISO protein:increased expression:colorectum (human) RGD PMID:30144500 RGD:151347859 NCBI chr 3:47,487,948...47,683,623
Ensembl chr 3:48,590,221...48,781,248 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:16717119 RGD:150573704 NCBI chr16:10,196,432...10,198,205 JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase severity ISO RGD PMID:11443610 RGD:150521545 NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 treatment ISO RGD PMID:29229353 RGD:127284843 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067 		JBrowse link
G STRAP serine/threonine kinase receptor associated protein ISO RGD PMID:16778189 RGD:1581429 NCBI chr12:15,883,512...15,904,778
Ensembl chr12:16,279,956...16,300,746 		JBrowse link
G TP53 tumor protein p53 ISO DNA:missense mutation::p.R72P (human) RGD PMID:29560751 RGD:14995498 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TXNRD3 thioredoxin reductase 3 ISO mRNA:increased expression:colorectum (human) RGD PMID:30469315 RGD:151665806 NCBI chr 3:123,644,679...123,697,563
Ensembl chr 3:130,967,026...131,013,667 		JBrowse link
G XPO1 exportin 1 disease_progression ISO protein:increased expression:colorectum (human) RGD PMID:31870117 RGD:151665794 NCBI chr2A:61,562,372...61,622,841
Ensembl chr2A:62,698,935...62,757,793 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 susceptibility ISO DNA:SNPs:exon 6, exon 10: p.R194W, p.R399Q (human) RGD PMID:28638257 RGD:150539031 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
descending colon cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDM5C lysine demethylase 5C onset ISO associate with colorectal cancer;DNA:mutations:multiple (human) RGD PMID:30018131 RGD:151361178 NCBI chr  X:45,377,609...45,440,025
Ensembl chr  X:53,515,886...53,548,785 		JBrowse link
Oligodontia-Colorectal Cancer Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 ISO ClinVar Annotator: match by term: AXIN2-related attenuated familial adenomatous polyposis | ClinVar Annotator: match by term: AXIN2-related disorder | ClinVar Annotator: match by term: Oligodontia-colorectal cancer syndrome | ClinVar Annotator: match by term: TOOTH AGENESIS-COLORECTAL CANCER SYNDROME
ClinVar Annotator: match by term: AXIN2-related attenuated familial adenomatous polyposis | ClinVar Annotator: match by term: Oligodontia-colorectal cancer syndrome | ClinVar Annotator: match by term: TOOTH AGENESIS-COLORECTAL CANCER SYNDROME		 OMIM
ClinVar		 PMID:9536098 PMID:10330403 PMID:11017067 PMID:12101426 PMID:15042511 More... NCBI chr17:59,476,336...59,509,358
Ensembl chr17:64,688,416...64,720,086 		JBrowse link
G GNA13 G protein subunit alpha 13 ISO ClinVar Annotator: match by term: Oligodontia-colorectal cancer syndrome ClinVar PMID:28492532 NCBI chr17:58,957,682...59,005,182 JBrowse link
G RGS9 regulator of G protein signaling 9 ISO ClinVar Annotator: match by term: Oligodontia-colorectal cancer syndrome ClinVar PMID:28492532 NCBI chr17:59,085,707...59,176,368
Ensembl chr17:64,262,585...64,389,559 		JBrowse link
rectum adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Rectum adenocarcinoma ClinVar PMID:24033266 PMID:25741868 PMID:26530882 PMID:28195569 PMID:28492532 More... NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709 		JBrowse link
G BIRC2 baculoviral IAP repeat containing 2 disease_progression ISO mRNA:increased expression:rectum (human) RGD PMID:31964418 RGD:153344516 NCBI chr11:97,298,736...97,324,966
Ensembl chr11:100,793,036...100,822,421 		JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 ameliorates ISO mRNA:increased expression:rectum (human) RGD PMID:31964418 RGD:153344516 NCBI chr11:97,269,778...97,290,112
Ensembl chr11:100,763,274...100,785,194 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 ISO mRNA:increased expression:rectum (human) RGD PMID:28486105 RGD:153323299 NCBI chr12:6,701,004...6,738,621
Ensembl chr12:6,619,089...6,656,076 		JBrowse link
G EEF2 eukaryotic translation elongation factor 2 ISO protein:increased expression:rectum (human) RGD PMID:19360331 RGD:153298969 NCBI chr19:3,000,608...3,009,918
Ensembl chr19:3,950,772...3,960,172 		JBrowse link
G KDM6A lysine demethylase 6A exacerbates ISO mRNA:decreased expression:rectum (human) RGD PMID:33174323 RGD:150429730 NCBI chr  X:37,313,000...37,548,630
Ensembl chr  X:45,127,382...45,362,029 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 treatment ISO RGD PMID:21036745 RGD:151361202 NCBI chr16:68,512,407...68,552,763 JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO DNA:missense mutation:CDS: (rs2293152) (human) RGD PMID:22121102 RGD:153323313 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067 		JBrowse link
G STAT4 signal transducer and activator of transcription 4 ISO DNA:SNP:intron: (rs3024861) (human) RGD PMID:22121102 RGD:153323313 NCBI chr2B:78,331,402...78,549,231
Ensembl chr2B:196,247,881...196,366,011 		JBrowse link
G STAT6 signal transducer and activator of transcription 6 ISO DNA:SNP:intron: (rs3024979) (human) RGD PMID:22121102 RGD:153323313 Ensembl chr12:32,068,679...32,085,099 JBrowse link
rectum cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNG2 cyclin G2 ISO mRNA:decreased expression:colon,rectum (human) RGD PMID:27982046 RGD:151361200 NCBI chr 4:47,034,502...47,044,475
Ensembl chr 4:52,870,692...52,882,330 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 ISO DNA:missense mutation:CDS p.D140E (rs7479004) (human) RGD PMID:25407497 RGD:153323305 NCBI chr12:6,701,004...6,738,621
Ensembl chr12:6,619,089...6,656,076 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 exacerbates ISO protein:increased expression:rectum (human) RGD PMID:24375277 RGD:152023614 NCBI chr2B:23,744,271...23,748,106
Ensembl chr2B:140,181,829...140,189,647 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 susceptibility ISO DNA:SNP:intron: (rs6022999) (human) RGD PMID:31740231 RGD:151665338 NCBI chr20:50,500,103...50,520,487
Ensembl chr20:51,721,685...51,742,716 		JBrowse link
G GPX3 glutathione peroxidase 3 susceptibility ISO DNA:SNPs: (rs3828599, rs736775, rs8177447) (human) RGD PMID:22371331 RGD:151665750 NCBI chr 5:146,447,939...146,456,476 JBrowse link
G IL6 interleukin 6 treatment ISO RGD PMID:28272402 RGD:14975288 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 treatment
susceptibility		 ISO DNA:SNP:intron: (rs2548663) (human)
DNA:SNP:intron: (rs43184) (human)		 RGD PMID:23027623 PMID:23859041 RGD:13217411 RGD:150573807 NCBI chr 5:57,116,405...57,197,017
Ensembl chr 5:58,745,579...58,826,959 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 susceptibility ISO DNA:SNPs:introns: (rs851011, rs851006) (human) RGD PMID:23859041 RGD:150573807 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease susceptibility ISO DNA:SNP:3'utr: (rs2155209) (human) RGD PMID:26735576 RGD:151361212 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G NBN nibrin susceptibility ISO DNA:SNP:3'utr: (rs14448) (human) RGD PMID:26735576 RGD:151361212 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 susceptibility ISO DNA:SNP:3'utr: (rs1051677) (human) RGD PMID:26735576 RGD:151361212 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235 		JBrowse link
sigmoid colon cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Sigmoid colon cancer ClinVar PMID:25741868 PMID:28492532 NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709 		JBrowse link
G MSH2 mutS homolog 2 ISO ClinVar Annotator: match by term: Sigmoid colon cancer ClinVar PMID:10495924 PMID:12658575 PMID:15849733 PMID:17312306 PMID:18566915 More... NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MSH6 mutS homolog 6 ISO ClinVar Annotator: match by term: Sigmoid colon cancer ClinVar PMID:9354786 PMID:12376507 PMID:18809606 PMID:19924528 PMID:20176959 More... NCBI chr2A:47,901,591...47,926,662
Ensembl chr2A:48,824,350...48,849,779 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15805
    disease of anatomical entity 15483
      gastrointestinal system disease 6593
        intestinal disease 2946
          rectal disease 1942
            Colorectal Neoplasms 1685
              colorectal cancer 929
                Colorectal Cancer 10 6
                Oligodontia-Colorectal Cancer Syndrome 3
                colon cancer + 226
                colorectal carcinoma + 164
                rectum cancer + 20
Path 2
Term Annotations click to browse term
  disease 15805
    disease of cellular proliferation 7489
      Neoplasms by Site 6959
        Digestive System Neoplasms 3697
          Gastrointestinal Neoplasms 3578
            Intestinal Neoplasms 1703
              intestinal cancer 931
                large intestine cancer 929
                  colorectal cancer 929
                    Colorectal Cancer 10 6
                    Oligodontia-Colorectal Cancer Syndrome 3
                    colon cancer + 226
                    colorectal carcinoma + 164
                    rectum cancer + 20
paths to the root