FSIP1 (fibrous sheath interacting protein 1) - Rat Genome Database

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Gene: FSIP1 (fibrous sheath interacting protein 1) Pan paniscus
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Symbol: FSIP1
Name: fibrous sheath interacting protein 1
RGD ID: 12017991
Description: ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: fibrous sheath-interacting protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21628,834,711 - 29,025,637 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11532,991,549 - 33,176,990 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01518,540,424 - 18,722,868 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11536,795,726 - 36,978,917 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
FSIP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21628,834,711 - 29,025,637 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11532,991,549 - 33,176,990 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01518,540,424 - 18,722,868 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11536,795,726 - 36,978,917 (-)NCBIpanpan1.1PanPan1.1panPan2
FSIP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381539,597,440 - 39,782,841 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1539,588,357 - 39,782,841 (-)EnsemblGRCh38hg38GRCh38
GRCh371539,892,232 - 40,075,042 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361537,679,524 - 37,862,331 (-)NCBINCBI36Build 36hg18NCBI36
Build 341537,679,523 - 37,862,323NCBI
Celera1516,655,072 - 16,838,307 (-)NCBICelera
Cytogenetic Map15q14NCBI
HuRef1516,735,644 - 16,918,847 (-)NCBIHuRef
CHM1_11540,011,614 - 40,194,382 (-)NCBICHM1_1
T2T-CHM13v2.01537,402,151 - 37,588,039 (-)NCBIT2T-CHM13v2.0
Fsip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392117,960,742 - 118,087,468 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2117,960,905 - 118,087,447 (-)EnsemblGRCm39 Ensembl
GRCm382118,130,261 - 118,256,987 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2118,130,424 - 118,256,966 (-)EnsemblGRCm38mm10GRCm38
MGSCv372118,030,624 - 118,082,702 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362117,896,329 - 117,948,395 (-)NCBIMGSCv36mm8
MGSCv362119,140,167 - 119,192,702 (-)NCBIMGSCv36mm8
Celera2119,346,602 - 119,401,838 (-)NCBICelera
Cytogenetic Map2E5NCBI
cM Map259.38NCBI
Fsip1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83125,528,538 - 125,671,135 (-)NCBIGRCr8
mRatBN7.23105,074,584 - 105,217,180 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3105,068,543 - 105,217,167 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3108,831,542 - 108,882,667 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03117,427,062 - 117,478,193 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03115,087,449 - 115,138,568 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03109,877,943 - 110,021,186 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3109,969,152 - 110,021,149 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03116,426,960 - 116,567,990 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43104,629,182 - 104,680,197 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13104,525,610 - 104,576,625 (-)NCBI
Celera3104,084,668 - 104,135,574 (-)NCBICelera
Cytogenetic Map3q35NCBI
Fsip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554166,509,477 - 6,717,115 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554166,507,177 - 6,710,526 (-)NCBIChiLan1.0ChiLan1.0
FSIP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1306,783,816 - 6,977,987 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl306,790,639 - 6,977,921 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha306,838,409 - 7,032,728 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0306,909,895 - 7,104,636 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl306,916,725 - 7,104,576 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1306,833,833 - 7,028,178 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0306,939,725 - 7,133,916 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0307,068,842 - 7,263,456 (-)NCBIUU_Cfam_GSD_1.0
Fsip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864085,236,331 - 85,422,220 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364713,083,572 - 3,270,326 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364713,084,564 - 3,270,278 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FSIP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1131,510,455 - 131,719,254 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11131,510,460 - 131,719,407 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21146,713,131 - 146,894,901 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FSIP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12643,220,918 - 43,605,506 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2643,227,795 - 43,407,241 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604897,534,958 - 97,733,243 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fsip1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248046,867,786 - 7,066,062 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248046,866,530 - 7,069,432 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_003826556   ⟹   XP_003826604
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21628,840,867 - 29,025,637 (-)NCBI
NHGRI_mPanPan11532,991,549 - 33,176,990 (-)NCBI
Mhudiblu_PPA_v01518,540,729 - 18,722,868 (-)NCBI
PanPan1.11536,795,726 - 36,978,917 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008951956   ⟹   XP_008950204
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21628,840,867 - 29,025,637 (-)NCBI
NHGRI_mPanPan11532,991,549 - 33,176,990 (-)NCBI
Mhudiblu_PPA_v01518,540,424 - 18,722,855 (-)NCBI
PanPan1.11536,796,352 - 36,978,878 (-)NCBI
Sequence:
RefSeq Acc Id: XM_055098839   ⟹   XP_054954814
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21628,840,867 - 29,025,637 (-)NCBI
NHGRI_mPanPan11532,991,818 - 33,176,990 (-)NCBI
RefSeq Acc Id: XM_055098840   ⟹   XP_054954815
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21628,840,867 - 29,022,382 (-)NCBI
NHGRI_mPanPan11532,991,549 - 33,173,735 (-)NCBI
RefSeq Acc Id: XM_055098841   ⟹   XP_054954816
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21628,936,200 - 29,025,637 (-)NCBI
NHGRI_mPanPan11533,087,625 - 33,176,990 (-)NCBI
RefSeq Acc Id: XM_055098842   ⟹   XP_054954817
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21628,936,206 - 29,022,486 (-)NCBI
NHGRI_mPanPan11533,087,631 - 33,173,839 (-)NCBI
RefSeq Acc Id: XM_055098843   ⟹   XP_054954818
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21628,884,327 - 29,025,637 (-)NCBI
NHGRI_mPanPan11533,035,774 - 33,176,990 (-)NCBI
RefSeq Acc Id: XM_055098844   ⟹   XP_054954819
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21628,879,760 - 29,025,637 (-)NCBI
NHGRI_mPanPan11533,031,243 - 33,176,990 (-)NCBI
RefSeq Acc Id: XM_055098846   ⟹   XP_054954821
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21628,879,760 - 29,022,425 (-)NCBI
NHGRI_mPanPan11533,031,243 - 33,173,740 (-)NCBI
RefSeq Acc Id: XM_063596535   ⟹   XP_063452605
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21628,834,711 - 29,025,637 (-)NCBI
RefSeq Acc Id: XP_003826604   ⟸   XM_003826556
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_008950204   ⟸   XM_008951956
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_054954815   ⟸   XM_055098840
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054954814   ⟸   XM_055098839
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054954819   ⟸   XM_055098844
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054954821   ⟸   XM_055098846
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054954818   ⟸   XM_055098843
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054954816   ⟸   XM_055098841
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054954817   ⟸   XM_055098842
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063452605   ⟸   XM_063596535
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
NCBI Gene FSIP1 ENTREZGENE