GLCE (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 16 | 58,424,114 - 58,535,662 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 62,588,654 - 62,700,148 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 48,110,725 - 48,222,251 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 66,884,203 - 66,995,654 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 15 | 66,979,271 - 66,995,646 (+) | Ensembl | panpan1.1 | | panPan2 | |
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GLCE (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 15 | 69,160,635 - 69,272,207 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 69,160,584 - 69,272,217 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 69,452,974 - 69,564,546 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 67,240,027 - 67,351,598 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 15 | 46,342,293 - 46,453,794 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | q23 | NCBI | | | | | HuRef | 15 | 46,285,927 - 46,397,426 (+) | NCBI | | HuRef | | | CHM1_1 | 15 | 69,571,150 - 69,682,613 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 66,983,187 - 67,094,669 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Glce (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 61,964,526 - 62,029,891 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 61,964,530 - 62,029,937 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 62,057,244 - 62,122,609 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 62,057,248 - 62,122,655 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 61,905,055 - 61,918,413 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 61,855,254 - 61,868,612 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 59,282,349 - 59,295,707 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | B | NCBI | | | | | cM Map | 9 | 33.56 | NCBI | | | | |
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Glce (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 71,441,607 - 71,507,639 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 62,546,104 - 62,612,144 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 62,546,107 - 62,612,040 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 8 | 67,006,588 - 67,073,723 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 67,006,592 - 67,040,005 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 66,742,121 - 66,808,110 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 66,199,172 - 66,268,727 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 8 | 61,964,353 - 62,030,080 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q24 | NCBI | | | | |
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Glce (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955450 | 7,149,721 - 7,227,524 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955450 | 7,149,721 - 7,226,835 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GLCE (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 30 | 33,093,318 - 33,208,754 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 33,110,947 - 33,206,095 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 33,026,823 - 33,141,852 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 33,292,160 - 33,407,357 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 30 | 33,292,130 - 33,407,353 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 30 | 33,218,466 - 33,333,109 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 33,280,176 - 33,394,763 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 33,527,094 - 33,642,556 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Glce (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 111,137,374 - 111,187,803 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936471 | 28,985,406 - 29,035,870 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936471 | 28,984,777 - 29,035,878 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GLCE (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 167,007,939 - 167,122,186 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 167,007,930 - 167,122,196 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 184,978,725 - 185,090,175 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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GLCE (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 26 | 14,181,625 - 14,295,414 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 26 | 14,184,606 - 14,295,372 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 127,179,011 - 127,301,763 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Glce (Heterocephalus glaber - naked mole-rat) |
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