CTNNB1 (catenin beta 1) - Rat Genome Database

Name: CTNNB1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: CTNNB1 (catenin beta 1) Pan paniscus

Analyze

Symbol:

CTNNB1

Name:

catenin beta 1

RGD ID:

11824331

Description:

ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); adherens junction organization (ortholog); animal organ development (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; E-cadherin signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

catenin beta-1

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CTNNB1 (catenin beta 1)	NCBI	Ortholog
Mus musculus (house mouse):	Ctnnb1 (catenin (cadherin associated protein), beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ctnnb1 (catenin beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ctnnb1 (catenin beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CTNNB1 (catenin beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ctnnb1 (catenin beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CTNNB1 (catenin beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	CTNNB1 (catenin beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ctnnb1 (catenin beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	3	41,372,368 - 41,414,030 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	41,373,726 - 41,414,030 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	3	41,104,940 - 41,145,934 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Aberrant Crypt Foci (ISO)

adenocarcinoma (ISO)

adenoma (ISO)

adrenal carcinoma (ISO)

Adrenal Gland Neoplasms (ISO)

adrenocortical carcinoma (ISO)

adult hepatocellular carcinoma (ISO)

Alzheimer's disease (ISO)

angiosarcoma (ISO)

Animal Disease Models (ISO)

autosomal dominant non-syndromic intellectual disability 19 (ISO)

bladder urothelial carcinoma (ISO)

Brain Neoplasms (ISO)

Breast Neoplasms (ISO)

calcinosis (ISO)

Cecal Neoplasms (ISO)

Chemical and Drug Induced Liver Injury (ISO)

colon adenocarcinoma (ISO)

colon cancer (ISO)

colon carcinoma (ISO)

Colonic Neoplasms (ISO)

colorectal cancer (ISO)

Colorectal Neoplasms (ISO)

Craniofacial Abnormalities (ISO)

craniopharyngioma (ISO)

Diabetic Cardiomyopathies (ISO)

dilated cardiomyopathy (ISO)

disease (ISO)

disease of cellular proliferation (ISO)

Disease Progression (ISO)

endodermal sinus tumor (ISO)

Endometrial Neoplasms (ISO)

Endometrioid Carcinomas (ISO)

esophageal carcinoma (ISO)

esophagus squamous cell carcinoma (ISO)

Experimental Liver Neoplasms (ISO)

exudative vitreoretinopathy 1 (ISO)

exudative vitreoretinopathy 7 (ISO)

fibrolamellar carcinoma (ISO)

Fibrosis (ISO)

gastric adenocarcinoma (ISO)

genetic disease (ISO)

granulosa cell tumor (ISO)

head and neck squamous cell carcinoma (ISO)

hepatoblastoma (ISO)

hepatocellular adenoma (ISO)

hepatocellular carcinoma (ISO)

hereditary desmoid disease (ISO)

hypertrophic cardiomyopathy (ISO)

imperforate anus (ISO)

in situ carcinoma (ISO)

intellectual disability (ISO)

Intestinal Neoplasms (ISO)

invasive lobular carcinoma (ISO)

Knee Osteoarthritis (ISO)

Left Ventricular Hypertrophy (ISO)

liver cancer (ISO)

liver cirrhosis (ISO)

Liver Neoplasms (ISO)

lung adenocarcinoma (ISO)

lung carcinoma (ISO)

Lung Neoplasms (ISO)

lung squamous cell carcinoma (ISO)

Lymphatic Metastasis (ISO)

Mammary Neoplasms, Experimental (ISO)

Mandibular Neoplasms (ISO)

mantle cell lymphoma (ISO)

medulloblastoma (ISO)

melanoma (ISO)

Multiple Abnormalities (ISO)

muscular atrophy (ISO)

Myocardial Ischemia (ISO)

Neoplasm Invasiveness (ISO)

Neoplasm Metastasis (ISO)

Neoplastic Cell Transformation (ISO)

nephroblastoma (ISO)

Nerve Degeneration (ISO)

Neurodevelopmental Disorders (ISO)

No-Reflow Phenomenon (ISO)

ovarian cancer (ISO)

Ovarian Neoplasms (ISO)

pancreatic adenocarcinoma (ISO)

pancreatic cancer (ISO)

papillary renal cell carcinoma (ISO)

Parathyroid Neoplasms (ISO)

Peritoneal Neoplasms (ISO)

Phyllodes Tumor (ISO)

pilomatrixoma (ISO)

progressive osseous heteroplasia (ISO)

prostate adenocarcinoma (ISO)

prostate cancer (ISO)

Prostatic Neoplasms (ISO)

renal cell carcinoma (ISO)

skin melanoma (ISO)

Skin Neoplasms (ISO)

Stevens-Johnson syndrome (ISO)

Stomach Neoplasms (ISO)

Stroke (ISO)

teratoma (ISO)

thyroid gland papillary carcinoma (ISO)

transitional cell carcinoma (ISO)

urinary bladder cancer (ISO)

uterine cancer (ISO)

Uterine Cervical Neoplasms (ISO)

Uterine Neoplasms (ISO)

Vascular Calcification (ISO)

Ventricular Dysfunction, Left (ISO)

Ventricular Remodeling (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adherens junction assembly (ISO)

adherens junction organization (ISO)

animal organ development (ISO)

anterior/posterior axis specification (ISO)

astrocyte-dopaminergic neuron signaling (ISO)

bicellular tight junction assembly (ISO)

bone remodeling (ISO)

bone resorption (ISO)

branching involved in blood vessel morphogenesis (ISO)

branching involved in ureteric bud morphogenesis (ISO)

canonical Wnt signaling pathway (ISO)

canonical Wnt signaling pathway involved in mesenchymal stem cell differentiation (ISO)

canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation (ISO)

canonical Wnt signaling pathway involved in positive regulation of epithelial to mesenchymal transition (ISO)

cell adhesion (ISO)

cell differentiation (ISO)

cell fate determination (ISO)

cell fate specification (ISO)

cell maturation (ISO)

cell morphogenesis involved in differentiation (ISO)

cell population proliferation (ISO)

cell-cell adhesion (ISO)

cell-matrix adhesion (ISO)

cellular process (ISO)

cellular protein localization (ISO)

cellular response to fibroblast growth factor stimulus (ISO)

cellular response to growth factor stimulus (ISO)

cellular response to indole-3-methanol (ISO)

cellular response to insulin-like growth factor stimulus (ISO)

cellular response to lithium ion (ISO)

cellular response to mechanical stimulus (ISO)

central nervous system vasculogenesis (ISO)

chemical synaptic transmission (ISO)

cranial ganglion development (ISO)

cranial skeletal system development (ISO)

dorsal root ganglion development (ISO)

dorsal/ventral axis specification (ISO)

dorsal/ventral pattern formation (ISO)

ectoderm development (ISO)

embryonic axis specification (ISO)

embryonic brain development (ISO)

embryonic digit morphogenesis (ISO)

embryonic foregut morphogenesis (ISO)

embryonic forelimb morphogenesis (ISO)

embryonic heart tube development (ISO)

embryonic hindlimb morphogenesis (ISO)

embryonic organ development (ISO)

embryonic skeletal limb joint morphogenesis (ISO)

endoderm formation (ISO)

endodermal cell fate commitment (ISO)

endothelial tube morphogenesis (ISO)

epithelial cell differentiation involved in prostate gland development (ISO)

epithelial tube branching involved in lung morphogenesis (ISO)

forebrain development (ISO)

fungiform papilla formation (ISO)

gastrulation with mouth forming second (ISO)

genitalia morphogenesis (ISO)

glial cell fate determination (ISO)

hair cycle process (ISO)

hair follicle morphogenesis (ISO)

hair follicle placode formation (ISO)

heart development (ISO)

hemopoiesis (ISO)

hindbrain development (ISO)

in utero embryonic development (ISO)

kidney development (ISO)

layer formation in cerebral cortex (ISO)

lens morphogenesis in camera-type eye (ISO)

limb development (ISO)

liver development (ISO)

lung cell differentiation (ISO)

lung development (ISO)

lung induction (ISO)

lung-associated mesenchyme development (ISO)

male genitalia development (ISO)

mesenchymal cell proliferation involved in lung development (ISO)

metanephros morphogenesis (ISO)

midbrain development (ISO)

midbrain dopaminergic neuron differentiation (ISO)

midgut development (ISO)

morphogenesis of embryonic epithelium (ISO)

myoblast differentiation (ISO)

negative regulation of angiogenesis (ISO)

negative regulation of apoptotic process (ISO)

negative regulation of apoptotic signaling pathway (ISO)

negative regulation of cell differentiation (ISO)

negative regulation of cell population proliferation (ISO)

negative regulation of chondrocyte differentiation (ISO)

negative regulation of gene expression (ISO)

negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis (ISO)

negative regulation of mitotic cell cycle, embryonic (ISO)

negative regulation of neurogenesis (ISO)

negative regulation of neuron death (ISO)

negative regulation of oligodendrocyte differentiation (ISO)

negative regulation of osteoclast differentiation (ISO)

negative regulation of oxidative stress-induced neuron death (ISO)

negative regulation of protein sumoylation (ISO)

negative regulation of transcription by RNA polymerase II (ISO)

negative regulation of transcription, DNA-templated (ISO)

nephron tubule formation (ISO)

neural plate development (ISO)

neuron differentiation (ISO)

neuron migration (ISO)

neuron projection extension (ISO)

odontogenesis of dentin-containing tooth (ISO)

oocyte development (ISO)

osteoclast differentiation (ISO)

oviduct development (ISO)

pancreas development (ISO)

positive regulation of apoptotic process (ISO)

positive regulation of branching involved in lung morphogenesis (ISO)

positive regulation of cell population proliferation (ISO)

positive regulation of core promoter binding (ISO)

positive regulation of determination of dorsal identity (ISO)

positive regulation of DNA-binding transcription factor activity (ISO)

positive regulation of endothelial cell differentiation (ISO)

positive regulation of epithelial cell differentiation (ISO)

positive regulation of epithelial cell proliferation involved in prostate gland development (ISO)

positive regulation of epithelial to mesenchymal transition (ISO)

positive regulation of fibroblast growth factor receptor signaling pathway (ISO)

positive regulation of gene expression (ISO)

positive regulation of heparan sulfate proteoglycan biosynthetic process (ISO)

positive regulation of histone H3-K4 methylation (ISO)

positive regulation of I-kappaB kinase/NF-kappaB signaling (ISO)

positive regulation of MAPK cascade (ISO)

positive regulation of mesenchymal cell proliferation (ISO)

positive regulation of molecular function (ISO)

positive regulation of neural precursor cell proliferation (ISO)

positive regulation of neuroblast proliferation (ISO)

positive regulation of neuron apoptotic process (ISO)

positive regulation of osteoblast differentiation (ISO)

positive regulation of skeletal muscle tissue development (ISO)

positive regulation of telomerase activity (ISO)

positive regulation of telomere maintenance via telomerase (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

positive regulation of transcription elongation from RNA polymerase II promoter (ISO)

positive regulation of transcription, DNA-templated (ISO)

proteasome-mediated ubiquitin-dependent protein catabolic process (ISO)

protein localization to cell surface (ISO)

protein polyubiquitination (ISO)

proximal/distal pattern formation (ISO)

regulation of apoptotic process (ISO)

regulation of calcium ion import (ISO)

regulation of cell differentiation (ISO)

regulation of cell population proliferation (ISO)

regulation of centriole-centriole cohesion (ISO)

regulation of centromeric sister chromatid cohesion (ISO)

regulation of core promoter binding (ISO)

regulation of epithelial cell differentiation (ISO)

regulation of gene expression (ISO)

regulation of myelination (ISO)

regulation of nephron tubule epithelial cell differentiation (ISO)

regulation of osteoblast differentiation (ISO)

regulation of osteoclast differentiation (ISO)

regulation of protein localization to cell surface (ISO)

regulation of secondary heart field cardioblast proliferation (ISO)

regulation of smooth muscle cell proliferation (ISO)

regulation of T cell proliferation (ISO)

regulation of timing of anagen (ISO)

regulation of transcription by RNA polymerase II (ISO)

renal inner medulla development (ISO)

renal outer medulla development (ISO)

renal vesicle formation (ISO)

response to activity (ISO)

response to cadmium ion (ISO)

response to cytokine (ISO)

response to drug (ISO)

response to estradiol (ISO)

response to estrogen (ISO)

response to hormone (ISO)

response to organic cyclic compound (ISO)

Schwann cell proliferation (ISO)

skeletal system development (ISO)

skin development (ISO)

smooth muscle cell differentiation (ISO)

sympathetic ganglion development (ISO)

synapse organization (ISO)

synaptic vesicle clustering (ISO)

synaptic vesicle transport (ISO)

T cell differentiation (ISO)

T cell differentiation in thymus (ISO)

thymus development (ISO)

tissue homeostasis (ISO)

trachea formation (ISO)

trachea morphogenesis (ISO)

vasculature development (ISO)

vasculogenesis (ISO)

Cellular Component

adherens junction (ISO)

apical junction complex (ISO)

apical part of cell (ISO)

apicolateral plasma membrane (ISO)

basolateral plasma membrane (ISO)

beta-catenin destruction complex (ISO)

beta-catenin-TCF complex (ISO)

beta-catenin-TCF7L2 complex (ISO)

bicellular tight junction (ISO)

catenin complex (ISO)

cell cortex (ISO)

cell junction (ISO)

cell periphery (ISO)

cell projection membrane (ISO)

cell-cell junction (ISO)

centrosome (ISO)

cytoplasm (ISO)

cytosol (ISO)

dendritic shaft (ISO)

euchromatin (ISO)

exocytic vesicle (ISO)

fascia adherens (ISO)

flotillin complex (ISO)

intercalated disc (ISO)

lamellipodium (ISO)

lateral plasma membrane (ISO)

membrane (ISO)

microvillus membrane (ISO)

neuron projection (ISO)

nuclear membrane (ISO)

nucleus (ISO)

perinuclear region of cytoplasm (ISO)

plasma membrane (ISO)

postsynaptic density, intracellular component (ISO)

postsynaptic membrane (ISO)

presynaptic active zone cytoplasmic component (ISO)

presynaptic membrane (ISO)

protein-containing complex (ISO)

protein-DNA complex (ISO)

Schaffer collateral - CA1 synapse (ISO)

Scrib-APC-beta-catenin complex (ISO)

synapse (ISO)

transcription regulator complex (ISO)

Wnt signalosome (ISO)

Z disc (ISO)

Molecular Function

alpha-catenin binding (ISO)

beta-catenin binding (ISO)

cadherin binding (ISO)

chromatin binding (ISO)

disordered domain specific binding (ISO)

DNA-binding transcription factor binding (ISO)

enzyme binding (ISO)

estrogen receptor binding (ISO)

histone methyltransferase binding (ISO)

I-SMAD binding (ISO)

ion channel binding (ISO)

ionotropic glutamate receptor binding (ISO)

kinase binding (ISO)

nitric-oxide synthase binding (ISO)

nuclear hormone receptor binding (ISO)

protein binding (ISO)

protein C-terminus binding (ISO)

protein kinase binding (ISO)

protein phosphatase binding (ISO)

protein-containing complex binding (ISO)

repressing transcription factor binding (ISO)

RNA polymerase II activating transcription factor binding (ISO)

RNA polymerase II transcription factor binding (ISO)

SMAD binding (ISO)

transcription coactivator activity (ISO)

transcription coregulator binding (ISO)

transcription factor binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

altered Wnt signaling, canonical pathway (ISO)

colorectal cancer pathway (ISO)

E-cadherin signaling pathway (ISO)

endometrial cancer pathway (ISO)

N-cadherin signaling pathway (ISO)

transforming growth factor-beta Smad dependent signaling pathway (ISO)

vascular endothelial growth factor signaling pathway (ISO)

Wnt signaling, canonical pathway (ISO)

References

Genomics

Comparative Map Data

CTNNB1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	3	41,372,368 - 41,414,030 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	41,373,726 - 41,414,030 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	3	41,104,940 - 41,145,934 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

CTNNB1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	3	41,194,741 - 41,260,096 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	3	41,199,422 - 41,240,445 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	3	41,240,996 - 41,281,934 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	41,215,946 - 41,256,943 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	3	41,216,015 - 41,256,938	NCBI
Celera	3	41,179,363 - 41,220,269 (+)	NCBI
Cytogenetic Map	3	p22.1	NCBI
HuRef	3	41,285,983 - 41,326,988 (+)	NCBI		HuRef
CHM1_1	3	41,191,513 - 41,232,505 (+)	NCBI		CHM1_1

Ctnnb1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	120,762,466 - 120,789,573 (+)	NCBI	GRCm39		mm39
GRCm39 Ensembl	9	120,758,282 - 120,789,573 (+)	Ensembl
GRCm38	9	120,933,400 - 120,960,507 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	120,929,216 - 120,960,507 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	120,842,518 - 120,869,625 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	9	120,782,173 - 120,809,205 (+)	NCBI			mm8
Celera	9	121,404,098 - 121,431,499 (+)	NCBI		Celera
Cytogenetic Map	9	F4	NCBI
cM Map	9	72.19	NCBI

Ctnnb1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	8	120,640,008 - 120,667,110 (+)	NCBI
Rnor_6.0 Ensembl	8	129,617,812 - 129,627,372 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	8	129,601,511 - 129,628,378 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	8	128,798,888 - 128,825,828 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	125,978,161 - 125,987,670 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	8	125,997,897 - 126,007,407 (+)	NCBI
Celera	8	119,795,816 - 119,805,325 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Ctnnb1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	29,030,716 - 29,047,449 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	29,030,716 - 29,047,447 (-)	NCBI	ChiLan1.0	ChiLan1.0

CTNNB1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	23	10,559,718 - 10,572,927 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	23	10,559,722 - 10,572,933 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Ctnnb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936473	29,999,542 - 30,034,610 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CTNNB1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	25,137,173 - 25,208,311 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	25,163,550 - 25,208,314 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	27,623,189 - 27,667,260 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CTNNB1
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	2,679,488 - 2,725,034 (+)	NCBI
ChlSab1.1 Ensembl	22	2,684,022 - 2,723,949 (+)	Ensembl

Ctnnb1
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624730	77,876,361 - 77,887,228 (-)	NCBI

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_034956181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034956184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	SSBP01000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSPPAT00000047519 ⟹ ENSPPAP00000024694

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	41,373,726 - 41,414,030 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000047524 ⟹ ENSPPAP00000024699

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	3	41,397,635 - 41,398,459 (+)	Ensembl

RefSeq Acc Id:

XM_034956181 ⟹ XP_034812072

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
Mhudiblu_PPA_v0	3	41,104,975 - 41,145,934 (+)	NCBI

RefSeq Acc Id:

XM_034956182 ⟹ XP_034812073

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
Mhudiblu_PPA_v0	3	41,104,975 - 41,145,934 (+)	NCBI

RefSeq Acc Id:

XM_034956183 ⟹ XP_034812074

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
Mhudiblu_PPA_v0	3	41,104,975 - 41,145,934 (+)	NCBI

RefSeq Acc Id:

XM_034956184 ⟹ XP_034812075

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
Mhudiblu_PPA_v0	3	41,104,940 - 41,145,934 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_034812072	(Get FASTA)	NCBI Sequence Viewer
	XP_034812073	(Get FASTA)	NCBI Sequence Viewer
	XP_034812074	(Get FASTA)	NCBI Sequence Viewer
	XP_034812075	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	XP_034812075 ⟸ XM_034956184
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_034812072 ⟸ XM_034956181
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_034812073 ⟸ XM_034956182
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_034812074 ⟸ XM_034956183
- Peptide Label:	isoform X1

RefSeq Acc Id:

ENSPPAP00000024694 ⟸ ENSPPAT00000047519

RefSeq Acc Id:

ENSPPAP00000024699 ⟸ ENSPPAT00000047524

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000035475	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSPPAP00000024694	UniProtKB/TrEMBL
	ENSPPAP00000024699	UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000047519	UniProtKB/TrEMBL
	ENSPPAT00000047524	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	Armadillo	UniProtKB/TrEMBL
	Beta-catenin	UniProtKB/TrEMBL
KEGG Report	pps:100982035	UniProtKB/TrEMBL
NCBI Gene	CTNNB1	ENTREZGENE
PANTHER	PTHR45976	UniProtKB/TrEMBL
Pfam	Arm	UniProtKB/TrEMBL
PRINTS	BCATNINFAMLY	UniProtKB/TrEMBL
PROSITE	ARM_REPEAT	UniProtKB/TrEMBL
SMART	ARM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
UniProt	A0A2R9BC13_PANPA	UniProtKB/TrEMBL
	A0A2R9BC18_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)