MMP9 (matrix metallopeptidase 9) - Rat Genome Database

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Gene: MMP9 (matrix metallopeptidase 9) Pan paniscus
Analyze
Symbol: MMP9
Name: matrix metallopeptidase 9
RGD ID: 12008550
Description: ENCODES a protein that exhibits fibronectin binding (ortholog); metallopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cellular response to cell-matrix adhesion (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular matrix of synaptic cleft (ortholog); extracellular space (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase); matrix metalloproteinase-9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22151,748,843 - 51,757,462 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12051,741,951 - 51,749,613 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02042,346,305 - 42,354,018 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12043,432,389 - 43,440,129 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2043,432,389 - 43,440,129 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Object Symbol
Species
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Source
Original Reference(s)
MMP9Bonoboabdominal aortic aneurysm severityISOMMP9 (Homo sapiens)9068941 RGDPMID:16432074 and REF_RGD_ID:1582641
MMP9Bonoboabdominal aortic aneurysm treatmentISOMmp9 (Rattus norvegicus)9068941 RGDPMID:21256058 and REF_RGD_ID:13207313
MMP9BonoboAcute Lung Injury  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:23040778 and REF_RGD_ID:13207316
MMP9BonoboAcute Otitis Media  ISOMmp9 (Mus musculus)9068941mRNA:increased expression:middle ear (mouse)RGDPMID:21889218 and REF_RGD_ID:127284853
MMP9Bonoboadrenoleukodystrophy  ISOMMP9 (Homo sapiens)9068941protein:increased expression:cerebrospinal fluidRGDPMID:23185624 and REF_RGD_ID:13204814
MMP9Bonoboadult respiratory distress syndrome  ISOMMP9 (Homo sapiens)9068941protein:increased expression:lungRGDPMID:21211006 and REF_RGD_ID:5129208
MMP9BonoboAlbuminuria onsetISOMMP9 (Homo sapiens)9068941associated with Diabetes Mellitus more ...RGDPMID:9774113 and REF_RGD_ID:7207214
MMP9Bonoboalcohol use disorder  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:24966898 and REF_RGD_ID:13207311
MMP9BonoboAlcoholic Liver Diseases  ISOMmp9 (Rattus norvegicus)9068941protein:increased expression:liverRGDPMID:17374579 and REF_RGD_ID:1642042
MMP9Bonoboallergic contact dermatitis  ISOMmp9 (Rattus norvegicus)9068941mRNA:increased expression:skin and lymph nodeRGDPMID:16977379 and REF_RGD_ID:2325935
MMP9Bonoboallergic contact dermatitis  ISOMmp9 (Mus musculus)9068941 RGDPMID:10359808 more ...
MMP9BonoboAlveolar Bone Loss treatmentISOMmp9 (Rattus norvegicus)9068941associated with periodontal diseaseRGDPMID:33364953 and REF_RGD_ID:329956421
MMP9BonoboAlzheimer's disease  ISOMMP9 (Homo sapiens)9068941protein:increased expression:plasma (human)RGDPMID:17697439 and REF_RGD_ID:7207052
MMP9Bonoboamyotrophic lateral sclerosis  ISOMmp9 (Mus musculus)9068941protein:increased expression:skin of body and spinal cordRGDPMID:20441996 and REF_RGD_ID:13204793
MMP9Bonoboamyotrophic lateral sclerosis severityISOMMP9 (Homo sapiens)9068941protein:increased expression:serum and cerebrospinal fluid (human)RGDPMID:19796283 and REF_RGD_ID:7207054
MMP9Bonoboangle-closure glaucoma no_associationISOMMP9 (Homo sapiens)9068941DNA:SNP:promoter:-1562C>T (human)RGDPMID:23441116 and REF_RGD_ID:8549724
MMP9Bonoboangle-closure glaucoma  ISOMMP9 (Homo sapiens)9068941DNA:SNPs: :rs17576 and rs3918249 (human)RGDPMID:21655354 and REF_RGD_ID:8547830
MMP9Bonoboangle-closure glaucoma  ISOMMP9 (Homo sapiens)9068941DNA:SNP: :rs2664538 (human)RGDPMID:17110919 and REF_RGD_ID:8547816
MMP9Bonoboangle-closure glaucoma  ISOMMP9 (Homo sapiens)9068941DNA:SNP: :c.836A>G (rs17576) (human)RGDPMID:23441116 and REF_RGD_ID:8549724
MMP9BonoboAnimal Mammary Neoplasms treatmentISOMmp9 (Mus musculus)9068941 RGDPMID:23714264 and REF_RGD_ID:8547831
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Original Reference(s)
MMP9Bonoboadenosine deaminase deficiency  ISOMMP9 (Homo sapiens)8554872ClinVar Annotator: match by term: Severe combined immunodeficiency more ...ClinVarPMID:26255240 more ...
MMP9Bonobofocal epilepsy  ISOMMP9 (Homo sapiens)8554872ClinVar Annotator: match by term: Focal-onset seizureClinVarPMID:32581362
MMP9Bonobogalactosialidosis  ISOMMP9 (Homo sapiens)8554872ClinVar Annotator: match by term: Combined deficiency of sialidase AND beta galactosidaseClinVarPMID:15110321 more ...
MMP9BonoboMetaphyseal Anadysplasia 2  ISOMMP9 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:16631427 more ...
MMP9BonoboT-Cell Immunodeficiency, Recurrent Infections, and Autoimmunity with or without Cardiac Malformations  ISOMMP9 (Homo sapiens)8554872ClinVar Annotator: match by term: T-cell immunodeficiency more ...ClinVarPMID:22174160 and PMID:28492532
1 to 20 of 66 rows
Object Symbol
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Original Reference(s)
MMP9Bonoboabdominal aortic aneurysm  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:17196988
MMP9BonoboAcute Coronary Syndrome  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:20981132
MMP9BonoboAnimal Disease Models  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:21051829
MMP9Bonoboaortic aneurysm  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:10231640
MMP9Bonoboaortic disease  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:15545515
MMP9BonoboAortic Rupture  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18178469
MMP9Bonoboasthma  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:11742282 and PMID:15131573
MMP9BonoboBone Neoplasms  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:16475674
MMP9Bonobobrain edema  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:15529013
MMP9BonoboBrain Injuries  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:19631748
MMP9Bonobobrain ischemia  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:15060315
MMP9BonoboBreast Neoplasms  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:19617202
MMP9Bonobocalcinosis  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:15545515 and PMID:21193197
MMP9BonoboCerebral Hemorrhage  ISOMMP9 (Homo sapiens)9068941CTD more ...CTDPMID:14630814 more ...
MMP9Bonobocerebral infarction  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:16846501
MMP9BonoboChemical and Drug Induced Liver Injury  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:22507835
MMP9Bonobochronic obstructive pulmonary disease  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:19299917
MMP9BonoboColonic Neoplasms  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:15725655
MMP9Bonobodiabetic neuropathy  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:20213226
MMP9BonoboDisease Progression  ISOMMP9 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:34626302
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Original Reference(s)
MMP9BonoboMetaphyseal Anadysplasia 2  ISOMMP9 (Homo sapiens)7240710 OMIM 


Biological Process
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Object Symbol
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Original Reference(s)
MMP9Bonoboapoptotic process acts_upstream_ofIEAUniProtKB:P41245 and ensembl:ENSMUSP00000017881150520179 EnsemblGO_REF:0000107
MMP9Bonobocell migration involved_inIEAUniProtKB:P14780 and ensembl:ENSP00000361405150520179 EnsemblGO_REF:0000107
MMP9Bonobocellular response to cell-matrix adhesion  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:12963432 more ...
MMP9Bonobocellular response to cytokine stimulus  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:19909738 and REF_RGD_ID:2325816
MMP9Bonobocellular response to interleukin-1  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:20145375 and REF_RGD_ID:2325789
MMP9Bonobocellular response to interleukin-1  ISOMmp9 (Rattus norvegicus)9068941Il-1betaRGDPMID:16046515 and REF_RGD_ID:2313720
MMP9Bonobocellular response to iron(III) ion  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:21683124 and REF_RGD_ID:7207286
MMP9Bonobocellular response to lipopolysaccharide  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:21683124 and REF_RGD_ID:7207286
MMP9Bonobocellular response to low-density lipoprotein particle stimulus  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:19554388 and REF_RGD_ID:2325827
MMP9Bonobocellular response to tumor necrosis factor  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:22410640 and REF_RGD_ID:7207278
MMP9Bonobocellular response to UV-A involved_inIEAUniProtKB:P14780 and ensembl:ENSP00000361405150520179 EnsemblGO_REF:0000107
MMP9Bonobocollagen catabolic process  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:22410640 and REF_RGD_ID:7207278
MMP9Bonobocollagen catabolic process acts_upstream_of_or_withinIEAUniProtKB:P41245 and ensembl:ENSMUSP00000017881150520179 EnsemblGO_REF:0000107
MMP9Bonobocollagen catabolic process involved_inIEAPANTHER:PTN002565619150520179 TreeGrafterGO_REF:0000118
MMP9Bonobocollagen catabolic process involved_inIEAUniProtKB-KW:KW-0177150520179 UniProtGO_REF:0000043
MMP9Bonoboembryo implantation acts_upstream_of_or_withinIEAUniProtKB:P41245 and ensembl:ENSMUSP00000017881150520179 EnsemblGO_REF:0000107
MMP9Bonoboendodermal cell differentiation involved_inIEAUniProtKB:P14780 and ensembl:ENSP00000361405150520179 EnsemblGO_REF:0000107
MMP9Bonoboextracellular matrix organization acts_upstream_of_or_withinIEAUniProtKB:P41245 and ensembl:ENSMUSP00000017881150520179 EnsemblGO_REF:0000107
MMP9Bonoboextracellular matrix organization involved_inIEAPANTHER:PTN002565619150520179 TreeGrafterGO_REF:0000118
MMP9Bonoboheart development  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:12061388 and REF_RGD_ID:10043157
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Cellular Component
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Molecular Function
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Original Reference(s)
MMP9Bonoboendopeptidase activity enablesIEAUniProtKB:P14780 and ensembl:ENSP00000361405150520179 EnsemblGO_REF:0000107
MMP9Bonobofibronectin binding  ISOFn1 (Rattus norvegicus)9068941 RGDPMID:18039280 and REF_RGD_ID:2296060
MMP9Bonobohydrolase activity enablesIEAUniProtKB-KW:KW-0378150520179 UniProtGO_REF:0000043
MMP9Bonoboidentical protein binding enablesIEAUniProtKB:P14780 and ensembl:ENSP00000361405150520179 EnsemblGO_REF:0000107
MMP9Bonobometal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
MMP9Bonobometalloendopeptidase activity enablesIEAUniProtKB:P14780 more ...150520179 EnsemblGO_REF:0000107
MMP9Bonobometalloendopeptidase activity enablesIEAInterPro:IPR001818 more ...150520179 InterProGO_REF:0000002
MMP9Bonobometalloendopeptidase activity enablesIEAPANTHER:PTN002565619150520179 TreeGrafterGO_REF:0000118
MMP9Bonobometalloendopeptidase activity enablesIEAEC:3.4.24.35150520179 UniProtGO_REF:0000003
MMP9Bonobometallopeptidase activity  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:11826121 and REF_RGD_ID:70539
MMP9Bonobometallopeptidase activity enablesIEAUniProtKB:P14780 and ensembl:ENSP00000361405150520179 EnsemblGO_REF:0000107
MMP9Bonobometallopeptidase activity enablesIEAUniProtKB-KW:KW-0482150520179 UniProtGO_REF:0000043
MMP9Bonobometallopeptidase activity enablesIEAInterPro:IPR006026 more ...150520179 InterProGO_REF:0000002
MMP9Bonobopeptidase activity  ISOMmp9 (Rattus norvegicus)9068941collagenaseRGDPMID:8531210 and REF_RGD_ID:7207198
MMP9Bonobopeptidase activity  ISOMmp9 (Rattus norvegicus)9068941 RGDPMID:20110414 and REF_RGD_ID:4142798
MMP9Bonobopeptidase activity enablesIEAUniProtKB:P14780 more ...150520179 EnsemblGO_REF:0000107
MMP9Bonobopeptidase activity enablesIEAARBA:ARBA00027408150520179 UniProtGO_REF:0000117
MMP9Bonobopeptidase activity enablesIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043
MMP9Bonoboprotein binding  ISOLcn2 (Rattus norvegicus)9068941 RGDPMID:17148685 and REF_RGD_ID:2316510
MMP9Bonoboprotein binding enablesISOUniProtKB:Q16819 and UniProtKB:Q168209068941 PMID:23123160IntActPMID:23123160
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Imported Annotations - PID (archival)

Object Symbol
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Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MMP9Bonobofibroblast growth factor signaling pathway  ISOMMP9 (Homo sapiens)9068941 PIDPID:200220
MMP9Bonobosyndecan signaling pathway  ISOMMP9 (Homo sapiens)9068941 PIDPID:200134 and PID:200156
PMID:22301074   PMID:30032202  



MMP9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22151,748,843 - 51,757,462 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12051,741,951 - 51,749,613 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02042,346,305 - 42,354,018 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12043,432,389 - 43,440,129 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2043,432,389 - 43,440,129 (+)Ensemblpanpan1.1panPan2
MMP9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382046,008,908 - 46,016,561 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2046,008,908 - 46,016,561 (+)EnsemblGRCh38hg38GRCh38
GRCh372044,637,547 - 44,645,200 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362044,070,954 - 44,078,607 (+)NCBINCBI36Build 36hg18NCBI36
Build 342044,070,953 - 44,078,606NCBI
Celera2041,348,998 - 41,356,660 (+)NCBICelera
Cytogenetic Map20q13.12NCBI
HuRef2041,378,970 - 41,386,505 (+)NCBIHuRef
CHM1_12044,540,180 - 44,547,844 (+)NCBICHM1_1
T2T-CHM13v2.02047,744,921 - 47,752,589 (+)NCBIT2T-CHM13v2.0
Mmp9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392164,782,246 - 164,797,770 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2164,782,700 - 164,797,770 (+)EnsemblGRCm39 Ensembl
GRCm382164,940,326 - 164,955,850 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2164,940,780 - 164,955,850 (+)EnsemblGRCm38mm10GRCm38
MGSCv372164,773,751 - 164,781,346 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362164,639,456 - 164,647,051 (+)NCBIMGSCv36mm8
Celera2170,885,579 - 170,893,176 (+)NCBICelera
Cytogenetic Map2H3NCBI
cM Map285.27NCBI
Mmp9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83174,103,474 - 174,111,434 (+)NCBIGRCr8
mRatBN7.23153,684,158 - 153,692,118 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3153,683,858 - 153,692,120 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3157,492,813 - 157,500,796 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03165,991,783 - 165,999,766 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03163,735,564 - 163,743,543 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03161,413,410 - 161,421,473 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3161,413,298 - 161,421,520 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03167,578,904 - 167,605,890 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43155,985,473 - 155,993,433 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13155,891,508 - 155,899,467 (+)NCBI
Celera3152,289,466 - 152,297,426 (+)NCBICelera
Cytogenetic Map3q42NCBI
Mmp9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544511,295,448 - 11,303,288 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544511,295,500 - 11,303,322 (-)NCBIChiLan1.0ChiLan1.0
MMP9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12433,274,260 - 33,281,116 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2433,274,268 - 33,281,293 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2432,801,110 - 32,807,958 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02433,984,592 - 33,991,450 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2433,984,589 - 33,991,650 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12433,242,837 - 33,249,697 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02433,358,136 - 33,364,990 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02433,897,331 - 33,904,192 (+)NCBIUU_Cfam_GSD_1.0
Mmp9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640191,584,597 - 191,592,230 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365147,037,639 - 7,045,793 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365147,038,240 - 7,045,873 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MMP9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1748,179,671 - 48,186,788 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11748,179,690 - 48,186,782 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21753,819,971 - 53,827,064 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MMP9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1217,867,267 - 17,874,757 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl217,867,177 - 17,874,712 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605066,502,195 - 66,509,744 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mmp9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247908,583,457 - 8,591,713 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247908,584,399 - 8,591,763 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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RefSeq Transcripts XM_008951382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000054070   ⟹   ENSPPAP00000031206
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2043,432,389 - 43,440,129 (+)Ensembl
RefSeq Acc Id: XM_008951382   ⟹   XP_008949630
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22151,748,843 - 51,757,462 (+)NCBI
NHGRI_mPanPan12051,741,951 - 51,749,613 (+)NCBI
Mhudiblu_PPA_v02042,346,305 - 42,354,018 (+)NCBI
PanPan1.12043,432,389 - 43,440,129 (+)NCBI
Sequence:
Protein RefSeqs XP_008949630 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000031206.1
RefSeq Acc Id: XP_008949630   ⟸   XM_008951382
- UniProtKB: A0A2R9BNH8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000031206   ⟸   ENSPPAT00000054070
Fibronectin type-II



1 to 40 of 41 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSPPAG00000038539 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000054070.1 UniProtKB/TrEMBL
Gene3D-CATH 2.10.10.10 UniProtKB/TrEMBL
  2.110.10.10 UniProtKB/TrEMBL
  3.40.390.10 UniProtKB/TrEMBL
InterPro FN_type2_dom UniProtKB/TrEMBL
  FN_type2_sf UniProtKB/TrEMBL
  Hemopexin-like_dom UniProtKB/TrEMBL
  Hemopexin-like_dom_sf UniProtKB/TrEMBL
  Hemopexin-like_repeat UniProtKB/TrEMBL
  Hemopexin_CS UniProtKB/TrEMBL
  Kringle-like UniProtKB/TrEMBL
  M10A_MMP UniProtKB/TrEMBL
  MetalloPept_cat_dom_sf UniProtKB/TrEMBL
  Pept_M10_metallopeptidase UniProtKB/TrEMBL
  Pept_M10A UniProtKB/TrEMBL
  Pept_M10A_Zn_BS UniProtKB/TrEMBL
  Peptidase_Metallo UniProtKB/TrEMBL
  PGBD-like_sf UniProtKB/TrEMBL
NCBI Gene MMP9 ENTREZGENE
PANTHER MATRIX METALLOPROTEINASE UniProtKB/TrEMBL
  PTHR10201:SF30 UniProtKB/TrEMBL
Pfam fn2 UniProtKB/TrEMBL
  Hemopexin UniProtKB/TrEMBL
  Peptidase_M10 UniProtKB/TrEMBL
PIRSF Peptidase_M10A_matrix UniProtKB/TrEMBL
PRINTS FNTYPEII UniProtKB/TrEMBL
  MATRIXIN UniProtKB/TrEMBL
PROSITE CYSTEINE_SWITCH UniProtKB/TrEMBL
  FN2_1 UniProtKB/TrEMBL
  FN2_2 UniProtKB/TrEMBL
  HEMOPEXIN UniProtKB/TrEMBL
  HEMOPEXIN_2 UniProtKB/TrEMBL
SMART FN2 UniProtKB/TrEMBL
  SM00120 UniProtKB/TrEMBL
  ZnMc UniProtKB/TrEMBL
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/TrEMBL
  SSF47090 UniProtKB/TrEMBL
  SSF50923 UniProtKB/TrEMBL
  SSF57440 UniProtKB/TrEMBL
1 to 40 of 41 rows