MMP9 (matrix metallopeptidase 9) - Rat Genome Database

Name: MMP9
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: MMP9 (matrix metallopeptidase 9) Pan paniscus

Analyze

Symbol:

MMP9

Name:

matrix metallopeptidase 9

RGD ID:

12008550

Description:

ENCODES a protein that exhibits endopeptidase activity (ortholog); fibronectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN aging (ortholog); cellular response to cadmium ion (ortholog); cellular response to cell-matrix adhesion (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase); matrix metalloproteinase-9

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MMP9 (matrix metallopeptidase 9)	NCBI	Ortholog
Mus musculus (house mouse):	Mmp9 (matrix metallopeptidase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Mmp9 (matrix metallopeptidase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mmp9 (matrix metallopeptidase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MMP9 (matrix metallopeptidase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mmp9 (matrix metallopeptidase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MMP9 (matrix metallopeptidase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	MMP9 (matrix metallopeptidase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mmp9 (matrix metallopeptidase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	20	43,432,389 - 43,440,129 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	43,432,389 - 43,440,129 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	20	42,346,305 - 42,354,018 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

abdominal aortic aneurysm (ISO)

Acute Coronary Syndrome (ISO)

Acute Lung Injury (ISO)

adrenoleukodystrophy (ISO)

adult respiratory distress syndrome (ISO)

Albuminuria (ISO)

alcohol use disorder (ISO)

Alcoholic Liver Diseases (ISO)

allergic contact dermatitis (ISO)

Alzheimer's disease (ISO)

amyotrophic lateral sclerosis (ISO)

Angina, Stable (ISO)

angle-closure glaucoma (ISO)

Animal Disease Models (ISO)

Animal Mammary Neoplasms (ISO)

anodontia (ISO)

Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis (ISO)

aortic aneurysm (ISO)

aortic disease (ISO)

Aortic Rupture (ISO)

Arterial Injury (ISO)

arteriosclerosis (ISO)

Arteriovenous Fistula (ISO)

arteriovenous malformation (ISO)

asthma (ISO)

atopic dermatitis (ISO)

atrial fibrillation (ISO)

attention deficit hyperactivity disorder (ISO)

autism spectrum disorder (ISO)

autoimmune lymphoproliferative syndrome (ISO)

autosomal dominant polycystic kidney disease (ISO)

bacterial meningitis (ISO)

bacterial pneumonia (ISO)

Behcet's disease (ISO)

Bone Neoplasms (ISO)

brain edema (ISO)

brain infarction (ISO)

Brain Injuries (ISO)

Brain Injuries, Traumatic (ISO)

brain ischemia (ISO)

Breast Neoplasms (ISO)

Bronchial Hyperreactivity (ISO)

bronchiectasis (ISO)

bronchiolitis obliterans (ISO)

Bronchopulmonary Dysplasia (ISO)

bullous pemphigoid (ISO)

Burns (ISO)

CAKUT2 (ISO)

calcinosis (ISO)

Cardiac Fibrosis (ISO)

Cardiomegaly (ISO)

cardiomyopathy (ISO)

carotid artery disease (ISO)

Carotid Artery Injuries (ISO)

Cerebral Hemorrhage (ISO)

cerebral infarction (ISO)

Chemical and Drug Induced Liver Injury (ISO)

childhood absence epilepsy (ISO)

cholangiocarcinoma (ISO)

cholesteatoma (ISO)

cholesteatoma of middle ear (ISO)

chorioamnionitis (ISO)

Choroidal Neovascularization (ISO)

chronic inflammatory demyelinating polyradiculoneuropathy (ISO)

chronic obstructive pulmonary disease (ISO)

Chronic Periodontitis (ISO)

chronic ulcer of skin (ISO)

Cicatrix (ISO)

cognitive disorder (ISO)

Colonic Neoplasms (ISO)

Colorectal Neoplasms (ISO)

congestive heart failure (ISO)

conjunctivochalasis (ISO)

coronary artery disease (ISO)

crescentic glomerulonephritis (ISO)

cystic fibrosis (ISO)

dermatomyositis (ISO)

Diabetic Foot (ISO)

Diabetic Nephropathies (ISO)

diabetic neuropathy (ISO)

diabetic retinopathy (ISO)

Down syndrome (ISO)

Duchenne muscular dystrophy (ISO)

ductal carcinoma in situ (ISO)

Embolism (ISO)

Emphysema (ISO)

endometrial carcinoma (ISO)

endometriosis (ISO)

epidermolysis bullosa simplex (ISO)

epilepsy (ISO)

esophagus adenocarcinoma (ISO)

exfoliation syndrome (ISO)

Experimental Arthritis (ISO)

Experimental Autoimmune Encephalomyelitis (ISO)

Experimental Autoimmune Neuritis (ISO)

Experimental Colitis (ISO)

Experimental Diabetes Mellitus (ISO)

Experimental Liver Cirrhosis (ISO)

Experimental Liver Neoplasms (ISO)

extrahepatic cholestasis (ISO)

facial paralysis (ISO)

familial hyperlipidemia (ISO)

Febrile Seizures (ISO)

Fibrosis (ISO)

Focal Cortical Dysplasia of Taylor (ISO)

focal epilepsy (ISO)

focal segmental glomerulosclerosis (ISO)

fragile X syndrome (ISO)

gastric ulcer (ISO)

glaucoma (ISO)

glioblastoma (ISO)

glomerulosclerosis (ISO)

Gouty Arthritis (ISO)

heart valve disease (ISO)

hepatic veno-occlusive disease (ISO)

hepatocellular carcinoma (ISO)

Herpes Simplex Encephalitis (ISO)

Human Influenza (ISO)

Huntington's disease (ISO)

hyperglycemia (ISO)

hyperhomocysteinemia (ISO)

Hyperlipoproteinemia Type II (ISO)

Hyperoxia (ISO)

Hyperoxic Lung Injury (ISO)

Hyperplasia (ISO)

hypertension (ISO)

hypertrophic cardiomyopathy (ISO)

ileus (ISO)

Inflammation (ISO)

interstitial lung disease (ISO)

intracranial aneurysm (ISO)

ischemia (ISO)

Kawasaki disease (ISO)

kidney disease (ISO)

Laryngeal Neoplasms (ISO)

Lead Poisoning (ISO)

liver disease (ISO)

Liver Injury (ISO)

Liver Reperfusion Injury (ISO)

lung disease (ISO)

Lung Neoplasms (ISO)

lung non-small cell carcinoma (ISO)

Lung Reperfusion Injury (ISO)

lupus nephritis (ISO)

lymphangioleiomyomatosis (ISO)

Lymphatic Metastasis (ISO)

macular degeneration (ISO)

malignant astrocytoma (ISO)

Malignant Pleural Effusions (ISO)

Mammary Neoplasms, Experimental (ISO)

Mandibuloacral Dysplasia with Type A Lipodystrophy (ISO)

Marfan syndrome (ISO)

membranous glomerulonephritis (ISO)

meningococcal meningitis (ISO)

Metaphyseal Anadysplasia (ISO)

Metaphyseal Anadysplasia 2 (ISO)

middle cerebral artery infarction (ISO)

morphine dependence (ISO)

Multiple Organ Failure (ISO)

multiple sclerosis (ISO)

Mycoplasma Infections (ISO)

myocardial infarction (ISO)

myocarditis (ISO)

Nasal Polyps (ISO)

Neointima (ISO)

Neoplasm Invasiveness (ISO)

Neoplasm Metastasis (ISO)

Neoplastic Cell Transformation (ISO)

Nephrogenic Fibrosing Dermopathy (ISO)

neuromyelitis optica (ISO)

obesity (ISO)

obstructive sleep apnea (ISO)

ocular hypertension (ISO)

oral submucous fibrosis (ISO)

osteoarthritis (ISO)

osteoporosis (ISO)

pancreatic cancer (ISO)

pancreatic ductal carcinoma (ISO)

paracoccidioidomycosis (ISO)

Parkinsonism (ISO)

Pathologic Constriction (ISO)

Perennial Allergic Rhinitis (ISO)

periodontitis (ISO)

pleural tuberculosis (ISO)

Pneumococcal Meningitis (ISO)

pneumonia (ISO)

polymyositis (ISO)

Polypoidal Choroidal Vasculopathy (ISO)

pre-eclampsia (ISO)

Premature Birth (ISO)

primary biliary cholangitis (ISO)

primary open angle glaucoma (ISO)

primary progressive multiple sclerosis (ISO)

Prostatic Neoplasms (ISO)

Pseudomonas Aeruginosa Keratitis (ISO)

pterygium (ISO)

pulmonary embolism (ISO)

pulmonary emphysema (ISO)

pulmonary fibrosis (ISO)

pulmonary hypertension (ISO)

pulmonary tuberculosis (ISO)

pyoderma gangrenosum (ISO)

relapsing-remitting multiple sclerosis (ISO)

renal cell carcinoma (ISO)

renal fibrosis (ISO)

renal hypertension (ISO)

Reperfusion Injury (ISO)

Respiratory Sounds (ISO)

respiratory syncytial virus infectious disease (ISO)

Respirovirus Infections (ISO)

retinal disease (ISO)

retinal ischemia (ISO)

rheumatic heart disease (ISO)

rheumatoid arthritis (ISO)

Rhinosinusitis (ISO)

Right Ventricular Hypertrophy (ISO)

rosacea (ISO)

sciatic neuropathy (ISO)

Seasonal Allergic Rhinitis (ISO)

Sepsis (ISO)

sinusitis (ISO)

Sjogren's syndrome (ISO)

skin melanoma (ISO)

Skin Neoplasms (ISO)

Spinal Cord Injuries (ISO)

squamous cell carcinoma (ISO)

status epilepticus (ISO)

stomach carcinoma (ISO)

Stroke (ISO)

Sturge-Weber syndrome (ISO)

Subarachnoid Hemorrhage (ISO)

Sunburn (ISO)

Sweet syndrome (ISO)

systemic scleroderma (ISO)

Tachycardia, Atrioventricular Nodal Reentry (ISO)

Takayasu's arteritis (ISO)

temporal arteritis (ISO)

temporal lobe epilepsy (ISO)

thoracic aortic aneurysm (ISO)

thrombosis (ISO)

transient cerebral ischemia (ISO)

tuberous sclerosis (ISO)

tularemia (ISO)

type 1 diabetes mellitus (ISO)

type 2 diabetes mellitus (ISO)

ulcerative colitis (ISO)

urinary bladder cancer (ISO)

varicose veins (ISO)

Venous Thrombosis (ISO)

ventricular septal defect (ISO)

viral encephalitis (ISO)

visual epilepsy (ISO)

withdrawal disorder (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

aging (ISO)

cellular response to cadmium ion (ISO)

cellular response to cell-matrix adhesion (ISO)

cellular response to cytokine stimulus (ISO)

cellular response to interleukin-1 (ISO)

cellular response to iron(III) ion (ISO)

cellular response to lipopolysaccharide (ISO)

cellular response to low-density lipoprotein particle stimulus (ISO)

cellular response to reactive oxygen species (ISO)

cellular response to tumor necrosis factor (ISO)

cellular response to UV-A (ISO)

collagen catabolic process (ISO)

embryo implantation (ISO)

endodermal cell differentiation (ISO)

extracellular matrix organization (ISO)

heart development (ISO)

kidney development (ISO)

negative regulation of apoptotic process (ISO)

negative regulation of cation channel activity (ISO)

negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway (ISO)

negative regulation of epithelial cell differentiation involved in kidney development (ISO)

negative regulation of fibroblast proliferation (ISO)

negative regulation of intrinsic apoptotic signaling pathway (ISO)

ossification (ISO)

parturition (ISO)

positive regulation of angiogenesis (ISO)

positive regulation of apoptotic process (ISO)

positive regulation of cell migration (ISO)

positive regulation of DNA binding (ISO)

positive regulation of epidermal growth factor receptor signaling pathway (ISO)

positive regulation of keratinocyte migration (ISO)

positive regulation of leukocyte migration (ISO)

positive regulation of protein phosphorylation (ISO)

positive regulation of receptor binding (ISO)

positive regulation of release of cytochrome c from mitochondria (ISO)

positive regulation of synaptic plasticity (ISO)

positive regulation of vascular associated smooth muscle cell proliferation (ISO)

proteolysis (ISO)

response to amyloid-beta (ISO)

response to drug (ISO)

response to estradiol (ISO)

response to ethanol (ISO)

response to heat (ISO)

response to high light intensity (ISO)

response to hyperoxia (ISO)

response to hypoxia (ISO)

response to lipopolysaccharide (ISO)

response to mechanical stimulus (ISO)

response to nicotine (ISO)

response to nutrient (ISO)

response to organic cyclic compound (ISO)

response to organic substance (ISO)

response to oxidative stress (ISO)

response to radiation (ISO)

response to retinoic acid (ISO)

response to tumor necrosis factor (ISO)

response to vitamin A (ISO)

skeletal system development (ISO)

tissue remodeling (ISO)

transformation of host cell by virus (ISO)

Cellular Component

extracellular space (ISO)

protein-containing complex (ISO)

Molecular Function

endopeptidase activity (ISO)

fibronectin binding (ISO)

identical protein binding (ISO)

metalloendopeptidase activity (ISO)

metallopeptidase activity (ISO)

peptidase activity (ISO)

protein binding (ISO)

protein-containing complex binding (ISO)

serine-type endopeptidase activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

fibroblast growth factor signaling pathway (ISO)

syndecan signaling pathway (ISO)

References

Genomics

Comparative Map Data

MMP9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	20	43,432,389 - 43,440,129 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	43,432,389 - 43,440,129 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	20	42,346,305 - 42,354,018 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

MMP9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	20	46,008,908 - 46,016,561 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	20	46,008,908 - 46,016,561 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	20	44,637,547 - 44,645,200 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	44,070,954 - 44,078,607 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	20	44,070,953 - 44,078,606	NCBI
Celera	20	41,348,998 - 41,356,660 (+)	NCBI
Cytogenetic Map	20	q13.12	NCBI
HuRef	20	41,378,970 - 41,386,505 (+)	NCBI		HuRef
CHM1_1	20	44,540,180 - 44,547,844 (+)	NCBI		CHM1_1

Mmp9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	164,782,246 - 164,797,770 (+)	NCBI	GRCm39		mm39
GRCm38	2	164,940,326 - 164,955,850 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	164,940,780 - 164,955,850 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	164,773,751 - 164,781,346 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	2	164,639,456 - 164,647,051 (+)	NCBI			mm8
Celera	2	170,885,579 - 170,893,176 (+)	NCBI		Celera
Cytogenetic Map	2	H3	NCBI
cM Map	2	85.27	NCBI

Mmp9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	153,684,158 - 153,692,118 (+)	NCBI
Rnor_6.0 Ensembl	3	161,413,298 - 161,421,520 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	3	161,413,410 - 161,421,473 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	3	167,578,904 - 167,605,890 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	155,985,473 - 155,993,433 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	3	155,891,508 - 155,899,467 (+)	NCBI
Celera	3	152,289,466 - 152,297,426 (+)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

Mmp9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	11,295,448 - 11,303,288 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955445	11,295,500 - 11,303,322 (-)	NCBI	ChiLan1.0	ChiLan1.0

MMP9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	24	33,274,268 - 33,281,293 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	24	33,274,260 - 33,281,116 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Mmp9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936514	7,038,240 - 7,045,873 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MMP9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	48,175,056 - 48,188,264 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	48,179,690 - 48,186,782 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	53,819,971 - 53,827,064 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MMP9
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	17,867,267 - 17,874,757 (-)	NCBI
ChlSab1.1 Ensembl	2	17,867,177 - 17,874,712 (-)	Ensembl

Mmp9
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624790	8,584,399 - 8,591,763 (-)	NCBI

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008951382	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	SSBP01000203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSPPAT00000054070 ⟹ ENSPPAP00000031206

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	20	43,432,389 - 43,440,129 (+)	Ensembl

RefSeq Acc Id:

XM_008951382 ⟹ XP_008949630

RefSeq Status:

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1	20	43,432,389 - 43,440,129 (+)	NCBI
Mhudiblu_PPA_v0	20	42,346,305 - 42,354,018 (+)	NCBI

Sequence:

show sequence

ACACACACACACACACCACCCTGACCCCTGAGTCAGCACTTGCCTGTCAAGGAGGGGTGGGGTC
ACAGGAGCGCCTCCTTAAAGCCCCCACAACAGCAGCTGCAGTCAGACACCTCTGCCCTCACCAT
GAGCCTCTGGGCCAGGTCCCCTGGTCCTGGTGCTCCTGGTGCTGGGCTGCTGCTTTGCTGCCCC
CAGACAGCGCCAGTCCACCCTTGTGCTCTTCCCTGGAGACCTGAGAACCAATCTCACCGACAGG
CAGCTGGCAGAGGAATACCTGTACCGCTATGGTTACACTCGGGTGGCAGAGATGCGTGGAGAGT
CGAAATCTCTGGGGCCTGCGCTGCTGCTTCTCCAGAAGCAACTGTCCCTGCCCGAGACCGGTGA
GCTGGACAGCGCCACGCTGAAGGCCATGCGAACCCCACGGTGCGGGGTCCCAGACCTGGGCAAA
TTCCAAACCTTTGAGGGCGACCTCAAGTGGCACCACCACAACATCACCTATTGGATCCAAAACT
ACTCGGAAGACTTGCCGCGGGCGGTGATTGACGACGCCTTTGCCCGCGCCTTCGCACTGTGGAG
CGCGGTGACGCCGCTCACCTTCACTCGCGTGTACAGCCGGGACGCAGACATCGTCATCCAGTTT
GGTGTCGCGGAGCACGGAGACGGGTATCCCTTCGACGGGAAGGACGGGCTCCTGGCACACGCCT
TTCCTCCTGGCCCCGGCATTCAGGGAGACGCCCATTTCGACGATGACGAGTTGTGGTCCCTGGG
CAAGGGCGTCGTGGTTCCAACTCGGTTTGGAAACGCAGATGGCGCGGCCTGCCACTTCCCCTTC
ATCTTCGAGGGCCGCTCCTACTCTGCCTGCACCACCGACGGTCGCTCCGACGGCTTGCCCTGGT
GCAGTACCACGGCCAACTACGACACCGACGACCGGTTTGGCTTCTGCCCCAGCGAGAGACTTTA
CACCCAGGATGGCAATGCTGATGGGAAACCCTGCCAGTTTCCATTCATCTTCCAAGGCCAATCC
TACTCCGCCTGCACCACGGACGGTCGCTCCGACGGCTACCGCTGGTGCGCCACCACCGCCAACT
ACGACCGGGACAAGCTCTTCGGCTTCTGCCCGACCCGAGCTGACTCGACGGTGATGGGGGGCAA
CTCGGCGGGGGAGCTGTGCGTCTTCCCCTTCACTTTCCTGGGTAAGGAGTACTCGACCTGTACC
AGCGAGGGCCGCGGAGATGGGCGCCTCTGGTGCGCTACCACCTCGAACTTTGACAGCGACAAGA
AGTGGGGCTTCTGCCCGGACCAAGGATACAGTTTGTTCCTCGTGGCGGCGCATGAGTTCGGCCA
CGCTCTGGGCTTAGATCATTCCTCAGTGCCGGAGGCGCTCATGTACCCTATGTACCGCTTCACT
GAGGGGCCCCCCTTGCATAAGGACGACGTGAATGGCATCCGGCACCTCTATGGTCCTCGCCCTG
AACCTGAGCCACGGCCTCCAACCACCACCACACCGCAGCCCACGGCTCCCCCGACGGTCTGCCC
CACCGGACCCCCCACTGTCCGCCCCTCAGAGCGCCCCACAGCTGGCCCCACAGGTCCCCCCTCA
GCTGGCCCCACAGGTCCCCCCACTGCTGGCCCTTCTACGGCCACTACTGTGCCTTTGAGTCCGG
TGGACGATGCCTGCAACGTGAACATCTTCGACGCCATCGCGGAGATTGGGAACCAGCTGTATTT
GTTCAAGGATGGGAAGTACTGGCGATTCTCTGAGGGCAGGGGGAGCCGGCCGCAGGGCCCCTTC
CTTATCGCCGACAAGTGGCCCGCGCTGCCCCGCAAGCTGGACTCGGTCTTTGAGGAGCCGCTCT
CCAAGAAGCTTTTCTTCTTCTCTGGGCGCCAGGTGTGGGTGTACACAGGCGCGTCGGTGCTGGG
CCCGAGGCGTTTGGACAAGCTGGGCCTGGGCGCCGACGTGGCCCAGGTGACCGGGGCCCTCCGG
AGTGGCAGGGGGAAGATGCTGCTGTTCAGCGGGCGGCGCCTCTGGAGGTTCGACGTGAAGGCGC
AGATGGTGGATCCCCGGAGCGCCAGCGAGGTGGACCGGATGTTCCCCGGGGTGCCTTTGGACAC
GCACGACGTCTTCCAGTACCGAGAGAAAGCCTATTTCTGCCAGGACCGCTTCTACTGGCGCGTG
AGTTCCCGGAATGAGTTGAACCAGGTGGACCAAGTGGGCTACGTGACCTATGACATCCTGCAGT
GCCCTGAGGACTAGGGCTCCCGTCCTGCTTTGGCAGTGCCATGTAAATCCCCACTGGGACCAAC
CCTGGGGAAGGAGCCAGTTTGCCGGATACAAACTGGTATTCTGTTCTGGAGGAAAGGGAGGAGT
GGAGGTGGGCTGGGCCCTCTCTTCTCACCTTCGTTTTTTGTTGGAGTGTTTCTAATAAACTTGG
ATTCTCTAACCTTTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_008949630	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_008949630 ⟸ XM_008951382

- Sequence:

show sequence

MRGESKSLGPALLLLQKQLSLPETGELDSATLKAMRTPRCGVPDLGKFQTFEGDLKWHHHNITY
WIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGL
LAHAFPPGPGIQGDAHFDDDELWSLGKGVVVPTRFGNADGAACHFPFIFEGRSYSACTTDGRSD
GLPWCSTTANYDTDDRFGFCPSERLYTQDGNADGKPCQFPFIFQGQSYSACTTDGRSDGYRWCA
TTANYDRDKLFGFCPTRADSTVMGGNSAGELCVFPFTFLGKEYSTCTSEGRGDGRLWCATTSNF
DSDKKWGFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRFTEGPPLHKDDVNGIRHLY
GPRPEPEPRPPTTTTPQPTAPPTVCPTGPPTVRPSERPTAGPTGPPSAGPTGPPTAGPSTATTV
PLSPVDDACNVNIFDAIAEIGNQLYLFKDGKYWRFSEGRGSRPQGPFLIADKWPALPRKLDSVF
EEPLSKKLFFFSGRQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGRRLWRF
DVKAQMVDPRSASEVDRMFPGVPLDTHDVFQYREKAYFCQDRFYWRVSSRNELNQVDQVGYVTY
DILQCPED

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RefSeq Acc Id:

ENSPPAP00000031206 ⟸ ENSPPAT00000054070

Protein Domains

Fibronectin type-II

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000038539	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSPPAP00000031206	UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000054070	UniProtKB/TrEMBL
Gene3D-CATH	1.10.101.10	UniProtKB/TrEMBL
	2.10.10.10	UniProtKB/TrEMBL
	2.110.10.10	UniProtKB/TrEMBL
	3.40.390.10	UniProtKB/TrEMBL
InterPro	FN_type2_dom	UniProtKB/TrEMBL
	FN_type2_sf	UniProtKB/TrEMBL
	Hemopexin-like_dom	UniProtKB/TrEMBL
	Hemopexin-like_dom_sf	UniProtKB/TrEMBL
	Hemopexin-like_repeat	UniProtKB/TrEMBL
	Hemopexin_CS	UniProtKB/TrEMBL
	Kringle-like	UniProtKB/TrEMBL
	M10A_MMP	UniProtKB/TrEMBL
	MetalloPept_cat_dom_sf	UniProtKB/TrEMBL
	MMP9	UniProtKB/TrEMBL
	Pept_M10_metallopeptidase	UniProtKB/TrEMBL
	Pept_M10A	UniProtKB/TrEMBL
	Pept_M10A_Zn_BS	UniProtKB/TrEMBL
	Peptidase_Metallo	UniProtKB/TrEMBL
	Peptidoglycan-bd-like	UniProtKB/TrEMBL
	PGBD-like_sf	UniProtKB/TrEMBL
	PGBDSf	UniProtKB/TrEMBL
NCBI Gene	MMP9	ENTREZGENE
PANTHER	PTHR10201:SF30	UniProtKB/TrEMBL
Pfam	fn2	UniProtKB/TrEMBL
	Hemopexin	UniProtKB/TrEMBL
	Peptidase_M10	UniProtKB/TrEMBL
	PG_binding_1	UniProtKB/TrEMBL
PIRSF	Peptidase_M10A_matrix	UniProtKB/TrEMBL
PRINTS	MATRIXIN	UniProtKB/TrEMBL
PROSITE	CYSTEINE_SWITCH	UniProtKB/TrEMBL
	FN2_1	UniProtKB/TrEMBL
	FN2_2	UniProtKB/TrEMBL
	HEMOPEXIN	UniProtKB/TrEMBL
	HEMOPEXIN_2	UniProtKB/TrEMBL
SMART	FN2	UniProtKB/TrEMBL
	SM00120	UniProtKB/TrEMBL
	ZnMc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47090	UniProtKB/TrEMBL
	SSF50923	UniProtKB/TrEMBL
	SSF57440	UniProtKB/TrEMBL
UniProt	A0A2R9BNH8_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)