MMP9 (matrix metallopeptidase 9) - Rat Genome Database

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Gene: MMP9 (matrix metallopeptidase 9) Sus scrofa
Analyze
Symbol: MMP9
Name: matrix metallopeptidase 9
RGD ID: 14175280
Description: ENCODES a protein that exhibits fibronectin binding (ortholog); metallopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to cell-matrix adhesion (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular matrix of synaptic cleft (ortholog); extracellular space (ortholog); glutamatergic synapse (ortholog); INTERACTS WITH (S)-nicotine; bis(2-chloroethyl) sulfide; bisphenol F
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase); matrix metalloproteinase 9; matrix metalloproteinase-9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1748,179,671 - 48,186,788 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11748,179,690 - 48,186,782 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21753,819,971 - 53,827,064 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
abdominal aortic aneurysm  (ISO)
Acute Coronary Syndrome  (ISO)
Acute Lung Injury  (ISO)
Acute Otitis Media  (ISO)
adenosine deaminase deficiency  (ISO)
adrenoleukodystrophy  (ISO)
adult respiratory distress syndrome  (ISO)
Albuminuria  (ISO)
alcohol use disorder  (ISO)
Alcoholic Liver Diseases  (ISO)
allergic contact dermatitis  (ISO)
Alveolar Bone Loss  (ISO)
Alzheimer's disease  (ISO)
amyotrophic lateral sclerosis  (ISO)
angle-closure glaucoma  (ISO)
Animal Disease Models  (ISO)
Animal Mammary Neoplasms  (ISO)
anodontia  (ISO)
Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis  (ISO)
aortic aneurysm  (ISO)
aortic disease  (ISO)
aortic dissection  (ISO)
Aortic Rupture  (ISO)
Arterial Injury  (ISO)
arteriosclerosis  (ISO)
Arteriovenous Fistula  (ISO)
arteriovenous malformation  (ISO)
asthma  (ISO)
atopic dermatitis  (ISO)
atrial fibrillation  (ISO)
attention deficit hyperactivity disorder  (ISO)
autism spectrum disorder  (ISO)
autoimmune lymphoproliferative syndrome  (ISO)
autosomal dominant polycystic kidney disease  (ISO)
bacterial meningitis  (ISO)
bacterial pneumonia  (ISO)
Behcet's disease  (ISO)
Bone Neoplasms  (ISO)
brain edema  (ISO)
brain infarction  (ISO)
Brain Injuries  (ISO)
brain ischemia  (ISO)
Breast Neoplasms  (ISO)
Bronchial Hyperreactivity  (ISO)
bronchiectasis  (ISO)
bronchiolitis obliterans  (ISO)
bronchopulmonary dysplasia  (ISO)
bullous pemphigoid  (ISO)
Burns  (ISO)
CAKUT2  (ISO)
calcinosis  (ISO)
Cardiac Fibrosis  (ISO)
Cardiomegaly  (ISO)
cardiomyopathy  (ISO)
carotid artery disease  (ISO)
Carotid Artery Injuries  (ISO)
Carotid Atherosclerosis  (ISO)
Cerebral Hemorrhage  (ISO)
cerebral infarction  (ISO)
Chemical and Drug Induced Liver Injury  (ISO)
childhood absence epilepsy  (ISO)
cholangiocarcinoma  (ISO)
cholesteatoma  (ISO)
cholesteatoma of middle ear  (ISO)
chorioamnionitis  (ISO)
Choroidal Neovascularization  (ISO)
chronic inflammatory demyelinating polyradiculoneuropathy  (ISO)
chronic obstructive pulmonary disease  (ISO)
Chronic Periodontitis  (ISO)
chronic ulcer of skin  (ISO)
Cicatrix  (ISO)
cognitive disorder  (ISO)
colon adenocarcinoma  (ISO)
Colonic Neoplasms  (ISO)
colorectal cancer  (ISO)
Colorectal Neoplasms  (ISO)
congestive heart failure  (ISO)
conjunctivochalasis  (ISO)
coronary artery disease  (ISO)
crescentic glomerulonephritis  (ISO)
cystic fibrosis  (ISO)
dermatomyositis  (ISO)
Diabetic Foot  (ISO)
Diabetic Nephropathies  (ISO)
diabetic neuropathy  (ISO)
diabetic retinopathy  (ISO)
Disease Progression  (ISO)
Down syndrome  (ISO)
Duchenne muscular dystrophy  (ISO)
ductal carcinoma in situ  (ISO)
Embolism  (ISO)
Emphysema  (ISO)
endometrial carcinoma  (ISO)
endometriosis  (ISO)
epidermolysis bullosa simplex  (ISO)
epilepsy  (ISO)
esophagus adenocarcinoma  (ISO)
esophagus squamous cell carcinoma  (ISO)
exfoliation syndrome  (ISO)
Experimental Arthritis  (ISO)
Experimental Autoimmune Encephalomyelitis  (ISO)
Experimental Autoimmune Neuritis  (ISO)
Experimental Colitis  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Liver Cirrhosis  (ISO)
Experimental Liver Neoplasms  (ISO)
Experimental Mammary Neoplasms  (ISO)
extrahepatic cholestasis  (ISO)
facial paralysis  (ISO)
familial hyperlipidemia  (ISO)
Febrile Seizures  (ISO)
Fibrosis  (ISO)
Focal Cortical Dysplasia of Taylor  (ISO)
focal epilepsy  (ISO)
focal segmental glomerulosclerosis  (ISO)
fragile X syndrome  (ISO)
galactosialidosis  (ISO)
gastric ulcer  (ISO)
glaucoma  (ISO)
glioblastoma  (ISO)
glomerulosclerosis  (ISO)
Gouty Arthritis  (ISO)
heart valve disease  (ISO)
Hemorrhagic Shock  (ISO)
hepatic veno-occlusive disease  (ISO)
hepatocellular carcinoma  (ISO)
Herpes Simplex Encephalitis  (ISO)
Human Influenza  (ISO)
Huntington's disease  (ISO)
hyperglycemia  (ISO)
hyperhomocysteinemia  (ISO)
Hyperlipoproteinemia Type II  (ISO)
Hyperoxia  (ISO)
Hyperoxic Lung Injury  (ISO)
Hyperplasia  (ISO)
hypertension  (ISO)
hypertrophic cardiomyopathy  (ISO)
ileus  (ISO)
Inflammation  (ISO)
interstitial lung disease  (ISO)
intracranial aneurysm  (ISO)
ischemia  (ISO)
Kawasaki disease  (ISO)
kidney disease  (ISO)
Laryngeal Neoplasms  (ISO)
Lead Poisoning  (ISO)
liver disease  (ISO)
Liver Injury  (ISO)
Liver Reperfusion Injury  (ISO)
lung disease  (ISO)
Lung Neoplasms  (ISO)
lung non-small cell carcinoma  (ISO)
Lung Reperfusion Injury  (ISO)
lupus nephritis  (ISO)
lymphangioleiomyomatosis  (ISO)
Lymphatic Metastasis  (ISO)
macular degeneration  (ISO)
malignant astrocytoma  (ISO)
Malignant Pleural Effusions  (ISO)
mandibuloacral dysplasia type A lipodystrophy  (ISO)
Marfan syndrome  (ISO)
membranous glomerulonephritis  (ISO)
meningococcal meningitis  (ISO)
metabolic dysfunction-associated steatohepatitis  (ISO)
Metaphyseal Anadysplasia  (ISO)
Metaphyseal Anadysplasia 2  (ISO)
middle cerebral artery infarction  (ISO)
morphine dependence  (ISO)
Multiple Organ Failure  (ISO)
multiple sclerosis  (ISO)
Mycoplasma Infections  (ISO)
myocardial infarction  (ISO)
myocarditis  (ISO)
Nasal Polyps  (ISO)
Neointima  (ISO)
Neoplasm Invasiveness  (ISO)
Neoplasm Metastasis  (ISO)
Neoplastic Cell Transformation  (ISO)
Nephrogenic Fibrosing Dermopathy  (ISO)
neuroblastoma  (ISO)
neuromyelitis optica  (ISO)
obesity  (ISO)
obstructive sleep apnea  (ISO)
ocular hypertension  (ISO)
oral submucous fibrosis  (ISO)
osteoarthritis  (ISO)
osteoporosis  (ISO)
pancreatic cancer  (ISO)
pancreatic ductal carcinoma  (ISO)
paracoccidioidomycosis  (ISO)
Parkinsonism  (ISO)
Pathologic Constriction  (ISO)
Perennial Allergic Rhinitis  (ISO)
periodontitis  (ISO)
pleural tuberculosis  (ISO)
Pneumococcal Meningitis  (ISO)
pneumonia  (ISO)
polymyositis  (ISO)
Polypoidal Choroidal Vasculopathy  (ISO)
pre-eclampsia  (ISO)
Premature Birth  (ISO)
primary biliary cholangitis  (ISO)
primary open angle glaucoma  (ISO)
primary progressive multiple sclerosis  (ISO)
Prostatic Neoplasms  (ISO)
Pseudomonas Aeruginosa Keratitis  (ISO)
pterygium  (ISO)
pulmonary embolism  (ISO)
pulmonary emphysema  (ISO)
pulmonary fibrosis  (ISO)
pulmonary hypertension  (ISO)
pulmonary tuberculosis  (ISO)
pyoderma gangrenosum  (ISO)
relapsing-remitting multiple sclerosis  (ISO)
renal cell carcinoma  (ISO)
renal fibrosis  (ISO)
renal hypertension  (ISO)
Reperfusion Injury  (ISO)
Respiratory Sounds  (ISO)
respiratory syncytial virus infectious disease  (ISO)
Respirovirus Infections  (ISO)
retinal disease  (ISO)
retinal ischemia  (ISO)
rheumatic heart disease  (ISO)
rheumatoid arthritis  (ISO)
Rhinosinusitis  (ISO)
Right Ventricular Hypertrophy  (ISO)
rosacea  (ISO)
sciatic neuropathy  (ISO)
Seasonal Allergic Rhinitis  (ISO)
Sepsis  (ISO)
sinusitis  (ISO)
Sjogren's syndrome  (ISO)
skin melanoma  (ISO)
Skin Neoplasms  (ISO)
Spinal Cord Injuries  (ISO)
squamous cell carcinoma  (ISO)
Stable Angina  (ISO)
status epilepticus  (ISO)
stomach cancer  (ISO)
stomach carcinoma  (ISO)
Stroke  (ISO)
Sturge-Weber syndrome  (ISO)
Subarachnoid Hemorrhage  (ISO)
Sunburn  (ISO)
Sweet syndrome  (ISO)
systemic scleroderma  (ISO)
T-Cell Immunodeficiency, Recurrent Infections, and Autoimmunity with or without Cardiac Malformations  (ISO)
Tachycardia, Atrioventricular Nodal Reentry  (ISO)
Takayasu's arteritis  (ISO)
temporal arteritis  (ISO)
temporal lobe epilepsy  (ISO)
thoracic aortic aneurysm  (ISO)
thrombosis  (ISO)
tongue squamous cell carcinoma  (ISO)
transient cerebral ischemia  (ISO)
traumatic brain injury  (ISO)
tuberous sclerosis  (ISO)
tularemia  (ISO)
type 1 diabetes mellitus  (ISO)
type 2 diabetes mellitus  (ISO)
ulcerative colitis  (ISO)
urinary bladder cancer  (ISO)
varicose veins  (ISO)
Venous Thrombosis  (ISO)
ventricular septal defect  (ISO)
viral encephalitis  (ISO)
withdrawal disorder  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
apoptotic process  (IEA,ISO)
cell migration  (IEA)
cellular response to cell-matrix adhesion  (ISO)
cellular response to cytokine stimulus  (ISO)
cellular response to interleukin-1  (ISO)
cellular response to iron(III) ion  (ISO)
cellular response to lipopolysaccharide  (ISO)
cellular response to low-density lipoprotein particle stimulus  (ISO)
cellular response to tumor necrosis factor  (ISO)
cellular response to UV-A  (IEA)
collagen catabolic process  (IBA,IEA,ISO)
embryo implantation  (IEA,ISO)
endodermal cell differentiation  (IEA)
extracellular matrix organization  (IBA,IEA,ISO)
heart development  (ISO)
kidney development  (ISO)
macrophage chemotaxis  (ISO)
modification of synaptic structure, modulating synaptic transmission  (ISO)
negative regulation of apoptotic process  (IEA)
negative regulation of cation channel activity  (ISO)
negative regulation of cysteine-type endopeptidase activity  (ISO)
negative regulation of epithelial cell differentiation involved in kidney development  (IEA)
negative regulation of fibroblast proliferation  (ISO)
negative regulation of intrinsic apoptotic signaling pathway  (IEA)
ossification  (ISO)
parturition  (ISO)
positive regulation of angiogenesis  (ISO)
positive regulation of apoptotic process  (IEA,ISO)
positive regulation of epidermal growth factor receptor signaling pathway  (IEA)
positive regulation of keratinocyte migration  (IEA)
positive regulation of leukocyte migration  (ISO)
positive regulation of protein phosphorylation  (ISO)
positive regulation of release of cytochrome c from mitochondria  (IEA)
positive regulation of synaptic plasticity  (ISO)
positive regulation of vascular associated smooth muscle cell proliferation  (IEA)
protein catabolic process  (ISO)
proteolysis  (IEA,ISO)
regulation of postsynaptic neurotransmitter receptor diffusion trapping  (ISO)
response to amyloid-beta  (IEA)
response to estradiol  (ISO)
response to ethanol  (ISO)
response to high light intensity  (ISO)
response to hyperoxia  (ISO)
response to hypoxia  (ISO)
response to lipopolysaccharide  (ISO)
response to mechanical stimulus  (ISO)
response to nicotine  (ISO)
response to nutrient  (ISO)
response to organic cyclic compound  (ISO)
response to oxidative stress  (ISO)
response to retinoic acid  (ISO)
response to tumor necrosis factor  (ISO)
response to vitamin A  (ISO)
response to xenobiotic stimulus  (ISO)
skeletal system development  (IEA,ISO)
symbiont-mediated transformation of host cell  (ISO)
tissue remodeling  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:17507431   PMID:17682873   PMID:18061148   PMID:18276914   PMID:18326810   PMID:19578961   PMID:20010314   PMID:21151608   PMID:21305651   PMID:21488134   PMID:22301074   PMID:22723453  
PMID:23223397   PMID:23710440   PMID:23897541   PMID:27866058   PMID:29991364   PMID:30032202   PMID:31931263  


Genomics

Comparative Map Data
MMP9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1748,179,671 - 48,186,788 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11748,179,690 - 48,186,782 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21753,819,971 - 53,827,064 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MMP9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382046,008,908 - 46,016,561 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2046,008,908 - 46,016,561 (+)EnsemblGRCh38hg38GRCh38
GRCh372044,637,547 - 44,645,200 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362044,070,954 - 44,078,607 (+)NCBINCBI36Build 36hg18NCBI36
Build 342044,070,953 - 44,078,606NCBI
Celera2041,348,998 - 41,356,660 (+)NCBICelera
Cytogenetic Map20q13.12NCBI
HuRef2041,378,970 - 41,386,505 (+)NCBIHuRef
CHM1_12044,540,180 - 44,547,844 (+)NCBICHM1_1
T2T-CHM13v2.02047,744,921 - 47,752,589 (+)NCBIT2T-CHM13v2.0
Mmp9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392164,782,246 - 164,797,770 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2164,782,700 - 164,797,770 (+)EnsemblGRCm39 Ensembl
GRCm382164,940,326 - 164,955,850 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2164,940,780 - 164,955,850 (+)EnsemblGRCm38mm10GRCm38
MGSCv372164,773,751 - 164,781,346 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362164,639,456 - 164,647,051 (+)NCBIMGSCv36mm8
Celera2170,885,579 - 170,893,176 (+)NCBICelera
Cytogenetic Map2H3NCBI
cM Map285.27NCBI
Mmp9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83174,103,474 - 174,111,434 (+)NCBIGRCr8
mRatBN7.23153,684,158 - 153,692,118 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3153,683,858 - 153,692,120 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3157,492,813 - 157,500,796 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03165,991,783 - 165,999,766 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03163,735,564 - 163,743,543 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03161,413,410 - 161,421,473 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3161,413,298 - 161,421,520 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03167,578,904 - 167,605,890 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43155,985,473 - 155,993,433 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13155,891,508 - 155,899,467 (+)NCBI
Celera3152,289,466 - 152,297,426 (+)NCBICelera
Cytogenetic Map3q42NCBI
Mmp9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544511,295,448 - 11,303,288 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544511,295,500 - 11,303,322 (-)NCBIChiLan1.0ChiLan1.0
MMP9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22151,748,843 - 51,757,462 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12051,741,951 - 51,749,613 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02042,346,305 - 42,354,018 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12043,432,389 - 43,440,129 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2043,432,389 - 43,440,129 (+)Ensemblpanpan1.1panPan2
MMP9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12433,274,260 - 33,281,116 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2433,274,268 - 33,281,293 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2432,801,110 - 32,807,958 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02433,984,592 - 33,991,450 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2433,984,589 - 33,991,650 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12433,242,837 - 33,249,697 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02433,358,136 - 33,364,990 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02433,897,331 - 33,904,192 (+)NCBIUU_Cfam_GSD_1.0
Mmp9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640191,584,597 - 191,592,230 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365147,037,639 - 7,045,793 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365147,038,240 - 7,045,873 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MMP9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1217,867,267 - 17,874,757 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl217,867,177 - 17,874,712 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605066,502,195 - 66,509,744 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mmp9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247908,583,457 - 8,591,713 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247908,584,399 - 8,591,763 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MMP9
177 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 2 8 3 2 5 8 5 8 1 4 3

Sequence


Ensembl Acc Id: ENSSSCT00000008139   ⟹   ENSSSCP00000007923
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1748,175,056 - 48,186,790 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000038590   ⟹   ENSSSCP00000045528
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1748,179,633 - 48,188,264 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000049521   ⟹   ENSSSCP00000049256
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1748,179,671 - 48,186,788 (+)Ensembl
RefSeq Acc Id: NM_001038004   ⟹   NP_001033093
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11748,179,690 - 48,186,782 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001033093   ⟸   NM_001038004
- Peptide Label: precursor
- UniProtKB: Q2VI03 (UniProtKB/TrEMBL),   A0A287AZD5 (UniProtKB/TrEMBL),   A0A4X1U0W0 (UniProtKB/TrEMBL),   A0A8D1NMV6 (UniProtKB/TrEMBL),   A0A8D1BD38 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000049256   ⟸   ENSSSCT00000049521
Ensembl Acc Id: ENSSSCP00000045528   ⟸   ENSSSCT00000038590
Ensembl Acc Id: ENSSSCP00000007923   ⟸   ENSSSCT00000008139
Protein Domains
Fibronectin type-II


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000007436 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005022870 UniProtKB/TrEMBL
  ENSSSCG00015045133 UniProtKB/TrEMBL
  ENSSSCG00025068399 UniProtKB/TrEMBL
  ENSSSCG00030058184 UniProtKB/TrEMBL
  ENSSSCG00035076448 UniProtKB/TrEMBL
  ENSSSCG00040031062 UniProtKB/TrEMBL
  ENSSSCG00045000935 UniProtKB/TrEMBL
  ENSSSCG00050072201 UniProtKB/TrEMBL
  ENSSSCG00055015774 UniProtKB/TrEMBL
  ENSSSCG00060030362 UniProtKB/TrEMBL
  ENSSSCG00065002348 UniProtKB/TrEMBL
  ENSSSCG00070013799 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000049521 ENTREZGENE
  ENSSSCT00000049521.3 UniProtKB/TrEMBL
  ENSSSCT00005036390.1 UniProtKB/TrEMBL
  ENSSSCT00015060729.1 UniProtKB/TrEMBL
  ENSSSCT00025093966.1 UniProtKB/TrEMBL
  ENSSSCT00030081172.1 UniProtKB/TrEMBL
  ENSSSCT00035104016.1 UniProtKB/TrEMBL
  ENSSSCT00040041779.1 UniProtKB/TrEMBL
  ENSSSCT00045001407.1 UniProtKB/TrEMBL
  ENSSSCT00050098534.1 UniProtKB/TrEMBL
  ENSSSCT00055031078.1 UniProtKB/TrEMBL
  ENSSSCT00060041019.1 UniProtKB/TrEMBL
  ENSSSCT00060041028.1 UniProtKB/TrEMBL
  ENSSSCT00065002925.1 UniProtKB/TrEMBL
  ENSSSCT00070026942.1 UniProtKB/TrEMBL
Gene3D-CATH 2.10.10.10 UniProtKB/TrEMBL
  2.110.10.10 UniProtKB/TrEMBL
  3.40.390.10 UniProtKB/TrEMBL
InterPro FN_type2_dom UniProtKB/TrEMBL
  FN_type2_sf UniProtKB/TrEMBL
  Hemopexin-like_dom UniProtKB/TrEMBL
  Hemopexin-like_dom_sf UniProtKB/TrEMBL
  Hemopexin-like_repeat UniProtKB/TrEMBL
  Hemopexin_CS UniProtKB/TrEMBL
  IPR006970 UniProtKB/TrEMBL
  Kringle-like UniProtKB/TrEMBL
  M10A_MMP UniProtKB/TrEMBL
  MetalloPept_cat_dom_sf UniProtKB/TrEMBL
  Pept_M10_metallopeptidase UniProtKB/TrEMBL
  Pept_M10A UniProtKB/TrEMBL
  Pept_M10A_Zn_BS UniProtKB/TrEMBL
  Peptidase_Metallo UniProtKB/TrEMBL
  Peptidoglycan-bd-like UniProtKB/TrEMBL
  PGBD-like_sf UniProtKB/TrEMBL
KEGG Report ssc:654325 UniProtKB/TrEMBL
NCBI Gene MMP9 ENTREZGENE
PANTHER MATRIX METALLOPROTEINASE UniProtKB/TrEMBL
  PTHR10201:SF30 UniProtKB/TrEMBL
Pfam fn2 UniProtKB/TrEMBL
  Hemopexin UniProtKB/TrEMBL
  Peptidase_M10 UniProtKB/TrEMBL
  PF04886 UniProtKB/TrEMBL
  PG_binding_1 UniProtKB/TrEMBL
PIRSF Peptidase_M10A_matrix UniProtKB/TrEMBL
PRINTS FNTYPEII UniProtKB/TrEMBL
  MATRIXIN UniProtKB/TrEMBL
PROSITE CYSTEINE_SWITCH UniProtKB/TrEMBL
  FN2_1 UniProtKB/TrEMBL
  FN2_2 UniProtKB/TrEMBL
  HEMOPEXIN UniProtKB/TrEMBL
  HEMOPEXIN_2 UniProtKB/TrEMBL
SMART FN2 UniProtKB/TrEMBL
  SM00120 UniProtKB/TrEMBL
  ZnMc UniProtKB/TrEMBL
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/TrEMBL
  SSF47090 UniProtKB/TrEMBL
  SSF50923 UniProtKB/TrEMBL
  SSF57440 UniProtKB/TrEMBL
UniProt A0A287AZD5 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1U0W0 ENTREZGENE
  A0A8D0XHN7_PIG UniProtKB/TrEMBL
  A0A8D1BD38 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1G9U4_PIG UniProtKB/TrEMBL
  A0A8D1NMV6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1V1A7_PIG UniProtKB/TrEMBL
  A0A8D1V1G1_PIG UniProtKB/TrEMBL
  B8XFS9_PIG UniProtKB/TrEMBL
  Q2I6Y6_PIG UniProtKB/TrEMBL
  Q2VI03 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A4X1U0W0 UniProtKB/TrEMBL
VGNC ID VGNC:96422 ENTREZGENE