ZWILCH (zwilch kinetochore protein) - Rat Genome Database

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Gene: ZWILCH (zwilch kinetochore protein) Pan paniscus
Analyze
Symbol: ZWILCH
Name: zwilch kinetochore protein
RGD ID: 12007553
Description: INVOLVED IN cell division (inferred); mitotic spindle assembly checkpoint signaling (inferred); protein localization to kinetochore (inferred); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN RZZ complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protein zwilch homolog; Zwilch, kinetochore associated, homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21655,757,530 - 55,802,617 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11559,930,285 - 59,975,374 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01545,452,382 - 45,496,780 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11563,727,562 - 63,771,224 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1563,727,562 - 63,771,213 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ZWILCH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21655,757,530 - 55,802,617 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11559,930,285 - 59,975,374 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01545,452,382 - 45,496,780 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11563,727,562 - 63,771,224 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1563,727,562 - 63,771,213 (+)Ensemblpanpan1.1panPan2
ZWILCH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381566,505,326 - 66,550,130 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1566,504,959 - 66,550,130 (+)EnsemblGRCh38hg38GRCh38
GRCh371566,797,664 - 66,842,468 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361564,584,485 - 64,628,877 (+)NCBINCBI36Build 36hg18NCBI36
Celera1543,686,777 - 43,729,897 (+)NCBICelera
Cytogenetic Map15q22.31NCBI
HuRef1543,633,568 - 43,677,018 (+)NCBIHuRef
CHM1_11566,915,437 - 66,959,818 (+)NCBICHM1_1
T2T-CHM13v2.01564,326,800 - 64,371,623 (+)NCBIT2T-CHM13v2.0
Zwilch
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39964,044,426 - 64,080,210 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl964,044,426 - 64,080,386 (-)EnsemblGRCm39 Ensembl
GRCm38964,137,144 - 64,173,104 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl964,137,144 - 64,173,104 (-)EnsemblGRCm38mm10GRCm38
MGSCv37963,984,951 - 64,020,738 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36963,935,152 - 63,970,937 (-)NCBIMGSCv36mm8
Celera961,362,577 - 61,398,224 (-)NCBICelera
Cytogenetic Map9CNCBI
cM Map934.52NCBI
Zwilch
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8873,532,968 - 73,566,214 (-)NCBIGRCr8
mRatBN7.2864,638,401 - 64,670,911 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl864,637,672 - 64,675,916 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0869,089,449 - 69,121,420 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl869,091,955 - 69,121,192 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0868,795,665 - 68,827,635 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4868,334,038 - 68,366,291 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera864,045,341 - 64,068,910 (-)NCBICelera
Cytogenetic Map8q24NCBI
Zwilch
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554509,139,169 - 9,169,921 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554509,139,214 - 9,170,136 (-)NCBIChiLan1.0ChiLan1.0
ZWILCH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13030,772,219 - 30,811,055 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3030,772,057 - 30,809,040 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3030,702,318 - 30,740,429 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03030,968,807 - 31,006,965 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3030,968,915 - 31,005,415 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13030,898,255 - 30,936,387 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03030,957,830 - 30,994,223 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03031,199,258 - 31,237,396 (+)NCBIUU_Cfam_GSD_1.0
Zwilch
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640108,794,141 - 108,829,732 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647126,642,352 - 26,677,684 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647126,642,321 - 26,674,475 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZWILCH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1164,481,964 - 164,527,223 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11164,481,784 - 164,526,843 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21182,231,876 - 182,271,644 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZWILCH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12617,000,373 - 17,045,980 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2617,000,148 - 17,045,804 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048124,404,846 - 124,450,586 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zwilch
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247816,171,114 - 6,209,380 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247816,168,482 - 6,209,581 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000044148   ⟹   ENSPPAP00000021346
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1563,727,562 - 63,771,213 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000044151   ⟹   ENSPPAP00000021349
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1563,731,457 - 63,768,416 (+)Ensembl
RefSeq Acc Id: XM_003827996   ⟹   XP_003828044
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21655,757,566 - 55,802,617 (+)NCBI
NHGRI_mPanPan11559,930,321 - 59,975,374 (+)NCBI
Mhudiblu_PPA_v01545,452,382 - 45,496,776 (+)NCBI
PanPan1.11563,727,562 - 63,771,224 (+)NCBI
Sequence:
RefSeq Acc Id: XM_055098207   ⟹   XP_054954182
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21655,757,530 - 55,802,617 (+)NCBI
NHGRI_mPanPan11559,930,285 - 59,975,374 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003828044 (Get FASTA)   NCBI Sequence Viewer  
  XP_054954182 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000021346
  ENSPPAP00000021346.1
  ENSPPAP00000021349.1
Reference Protein Sequences
RefSeq Acc Id: XP_003828044   ⟸   XM_003827996
- Peptide Label: isoform X1
- UniProtKB: A0A2R9B1Q3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000021346   ⟸   ENSPPAT00000044148
RefSeq Acc Id: ENSPPAP00000021349   ⟸   ENSPPAT00000044151
RefSeq Acc Id: XP_054954182   ⟸   XM_055098207
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AVP8 (UniProtKB/TrEMBL),   A0A2R9B1Q3 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000033861 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000044148.1 UniProtKB/TrEMBL
  ENSPPAT00000044151.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.1880 UniProtKB/TrEMBL
  1.20.58.730 UniProtKB/TrEMBL
  2.20.25.230 UniProtKB/TrEMBL
  6.10.140.520 UniProtKB/TrEMBL
  6.20.270.10 UniProtKB/TrEMBL
InterPro Zwilch UniProtKB/TrEMBL
NCBI Gene ZWILCH ENTREZGENE
PANTHER PROTEIN ZWILCH HOMOLOG UniProtKB/TrEMBL
  PTHR15995 UniProtKB/TrEMBL
Pfam Zwilch UniProtKB/TrEMBL
UniProt A0A2R9AVP8 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B1Q3 ENTREZGENE, UniProtKB/TrEMBL