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ONTOLOGY REPORT - ANNOTATIONS


Term:Digestive System Neoplasms
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Accession:DOID:9004351 term browser browse the term
Definition:Tumors or cancer of the DIGESTIVE SYSTEM.
Synonyms:exact_synonym: Cancer of Digestive System;   Cancer of the Digestive System;   Digestive System Cancer;   Digestive System Cancers;   Digestive System Neoplasm
 primary_id: MESH:D004067;   RDO:0005001
For additional species annotation, visit the Alliance of Genome Resources.


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Digestive System Neoplasms term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:2317206
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:2317210
G Ghsr growth hormone secretagogue receptor JBrowse link 2 113,065,953 113,071,265 RGD:11554173
G Msh3 mutS homolog 3 JBrowse link 2 21,790,048 21,931,791 RGD:1625103
G Runx3 RUNX family transcription factor 3 JBrowse link 5 153,507,093 153,531,137 RGD:2324957
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:11554173
adenoid cystic carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp1 aquaporin 1 (Colton blood group) JBrowse link 4 85,551,503 85,563,683 RGD:11554173
G Arid1a AT-rich interaction domain 1A JBrowse link 5 151,904,687 151,977,973 RGD:11554173
G Arid2 AT-rich interaction domain 2 JBrowse link 7 137,680,564 137,798,329 RGD:8554872
G Arid4b AT-rich interaction domain 4B JBrowse link 17 53,831,353 53,955,897 RGD:11554173
G Arid5b AT-rich interaction domain 5B JBrowse link 20 21,713,900 21,881,193 RGD:11554173
G Aspm abnormal spindle microtubule assembly JBrowse link 13 56,546,021 56,591,793 RGD:11554173
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:11554173
G Atrx ATRX, chromatin remodeler JBrowse link X 76,820,110 76,979,155 RGD:11554173
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:8554872
G Bcl11a BAF chromatin remodeling complex subunit BCL11A JBrowse link 14 108,826,717 108,921,197 RGD:11554173
G Bcor BCL6 co-repressor JBrowse link X 11,570,155 11,692,022 RGD:11554173
RGD:8554872
G Bcorl1 BCL6 co-repressor-like 1 JBrowse link X 135,187,468 135,233,859 RGD:11554173
G Brca1 BRCA1, DNA repair associated JBrowse link 10 89,394,821 89,455,093 RGD:11554173
G Brd1 bromodomain containing 1 JBrowse link 7 129,676,119 129,724,303 RGD:11554173
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:11554173
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:11554173
G Cmtr2 cap methyltransferase 2 JBrowse link 19 41,426,536 41,433,367 RGD:11554173
G Cntn6 contactin 6 JBrowse link 4 136,512,201 136,904,355 RGD:11554173
G Crebbp CREB binding protein JBrowse link 10 11,590,994 11,721,039 RGD:11554173
RGD:8554872
G Dapk1 death associated protein kinase 1 JBrowse link 17 4,297,038 4,454,941 RGD:11554173
G Dtl denticleless E3 ubiquitin protein ligase homolog JBrowse link 13 110,219,276 110,257,345 RGD:11554173
G Dtx4 deltex E3 ubiquitin ligase 4 JBrowse link 1 228,729,842 228,759,783 RGD:11554173
G Efhd1 EF-hand domain family, member D1 JBrowse link 9 94,362,249 94,408,884 RGD:11554173
G En1 engrailed homeobox 1 JBrowse link 13 36,532,758 36,537,888 RGD:11554173
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:11554173
G Erbin erbb2 interacting protein JBrowse link 2 33,880,860 33,952,806 RGD:11554173
G Espl1 extra spindle pole bodies like 1, separase JBrowse link 7 143,896,890 143,923,868 RGD:11554173
G Fanca FA complementation group A JBrowse link 19 56,067,548 56,126,075 RGD:11554173
G Fat1 FAT atypical cadherin 1 JBrowse link 16 50,372,150 50,501,716 RGD:11554173
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:11554173
RGD:8554872
G Fgf16 fibroblast growth factor 16 JBrowse link X 76,786,728 76,796,311 RGD:11554173
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link 1 200,590,951 200,696,946 RGD:8554872
G Fgfr4 fibroblast growth factor receptor 4 JBrowse link 17 9,990,072 10,004,339 RGD:11554173
G Foxo3 forkhead box O3 JBrowse link 20 46,428,078 46,519,156 RGD:11554173
G Foxp2 forkhead box P2 JBrowse link 4 41,364,441 41,944,685 RGD:11554173
G Gas2 growth arrest-specific 2 JBrowse link 1 107,234,389 107,363,624 RGD:11554173
G Gas6 growth arrest specific 6 JBrowse link 16 81,213,364 81,243,824 RGD:11554173
G Gins2 GINS complex subunit 2 JBrowse link 19 54,151,048 54,163,701 RGD:11554173
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 JBrowse link 2 181,045,694 181,103,321 RGD:11554173
G H1f4 H1.4 linker histone, cluster member JBrowse link 17 43,734,461 43,735,120 RGD:11554173
G Homer3 homer scaffold protein 3 JBrowse link 16 20,880,447 20,890,968 RGD:11554173
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:11554173
RGD:8554872
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 JBrowse link 9 71,882,108 71,911,645 RGD:8554872
G Igfbp2 insulin-like growth factor binding protein 2 JBrowse link 9 80,118,029 80,144,804 RGD:11554173
G Il17rd interleukin 17 receptor D JBrowse link 16 2,670,471 2,737,271 RGD:11554173
G Insrr insulin receptor-related receptor JBrowse link 2 187,161,817 187,181,400 RGD:11554173
G Irx4 iroquois homeobox 4 JBrowse link 1 32,634,774 32,645,151 RGD:11554173
G Isyna1 inositol-3-phosphate synthase 1 JBrowse link 16 20,589,497 20,592,333 RGD:11554173
G Itgb4 integrin subunit beta 4 JBrowse link 10 104,524,000 104,560,180 RGD:11554173
G Jag1 jagged canonical Notch ligand 1 JBrowse link 3 130,079,361 130,114,781 RGD:11554173
G Jak3 Janus kinase 3 JBrowse link 16 20,107,471 20,120,678 RGD:8554872
G Jmjd1c jumonji domain containing 1C JBrowse link 20 22,751,743 22,914,080 RGD:11554173
G Kansl1 KAT8 regulatory NSL complex subunit 1 JBrowse link 10 92,388,045 92,517,449 RGD:11554173
G Kat6a lysine acetyltransferase 6A JBrowse link 16 73,942,669 74,020,750 RGD:11554173
G Kdm6a lysine demethylase 6A JBrowse link X 4,805,493 4,945,788 RGD:11554173
G Kdm6b lysine demethylase 6B JBrowse link 10 56,000,494 56,009,582 RGD:11554173
G Kmt2c lysine methyltransferase 2C JBrowse link 4
4
82,506
6,083,650
109,986
6,294,413
RGD:11554173
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:8554872
G Krt15 keratin 15 JBrowse link 10 88,046,803 88,050,622 RGD:11554173
G Krt5 keratin 5 JBrowse link 7 143,320,142 143,324,536 RGD:11554173
G Lrrc56 leucine rich repeat containing 56 JBrowse link 1 214,182,232 214,197,184 RGD:8554872
G Magi1 membrane associated guanylate kinase, WW and PDZ domain containing 1 JBrowse link 4 125,684,816 126,300,013 RGD:11554173
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 JBrowse link 4 10,995,241 12,472,423 RGD:11554173
G Maml3 mastermind-like transcriptional coactivator 3 JBrowse link 2 140,734,138 141,276,886 RGD:11554173
G Map2k2 mitogen activated protein kinase kinase 2 JBrowse link 7 11,458,971 11,478,520 RGD:11554173
G Marcks myristoylated alanine rich protein kinase C substrate JBrowse link 20 42,966,140 42,971,838 RGD:11554173
G Mark2 microtubule affinity regulating kinase 2 JBrowse link 1 222,525,547 222,590,727 RGD:11554173
G Mecom MDS1 and EVI1 complex locus JBrowse link 2 117,396,084 117,993,604 RGD:8554872
G Mga MAX dimerization protein MGA JBrowse link 3 111,669,645 111,760,822 RGD:11554173
G Mier2 MIER family member 2 JBrowse link 7 13,039,759 13,055,632 RGD:11554173
G Mlc1 modulator of VRAC current 1 JBrowse link 7 129,949,984 129,970,314 RGD:11554173
G Morf4l1 mortality factor 4 like 1 JBrowse link 8 97,473,454 97,494,974 RGD:11554173
G Myb MYB proto-oncogene, transcription factor JBrowse link 1 16,658,178 16,690,135 RGD:11554173
G Mybl1 MYB proto-oncogene like 1 JBrowse link 5 9,279,756 9,315,112 RGD:11554173
G Mycbp Myc binding protein JBrowse link 5 141,560,192 141,567,399 RGD:11554173
G Mycn MYCN proto-oncogene, bHLH transcription factor JBrowse link 6 38,222,554 38,228,419 RGD:11554173
G Neto2 neuropilin and tolloid like 2 JBrowse link 19 22,450,579 22,486,530 RGD:11554173
G Nfib nuclear factor I/B JBrowse link 5 100,436,343 100,647,962 RGD:11554173
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:11554173
RGD:8554872
G Nsd1 nuclear receptor binding SET domain protein 1 JBrowse link 17 9,840,859 9,955,391 RGD:11554173
G Pcsk1n proprotein convertase subtilisin/kexin type 1 inhibitor JBrowse link X 15,324,263 15,327,705 RGD:11554173
G Pdzk1 PDZ domain containing 1 JBrowse link 2 198,965,685 198,999,323 RGD:11554173
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:11554173
RGD:8554872
G Prkdc protein kinase, DNA-activated, catalytic subunit JBrowse link 11 89,293,547 89,510,948 RGD:11554173
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:11554173
G Pygb glycogen phosphorylase B JBrowse link 3 146,581,063 146,629,504 RGD:11554173
G Rbfox2 RNA binding fox-1 homolog 2 JBrowse link 7 118,157,093 118,396,733 RGD:11554173
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:11554173
G Setd2 SET domain containing 2, histone lysine methyltransferase JBrowse link 8 118,802,478 118,888,224 RGD:11554173
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 9 61,594,620 61,634,510 RGD:8554872
G Slc24a3 solute carrier family 24 member 3 JBrowse link 3 139,333,942 139,835,728 RGD:11554173
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 JBrowse link 1 244,615,811 244,783,736 RGD:11554173
RGD:8554872
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 20 13,679,955 13,702,821 RGD:8554872
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 JBrowse link 10 87,116,827 87,138,890 RGD:11554173
G Smc1a structural maintenance of chromosomes 1A JBrowse link X 21,710,976 21,755,708 RGD:11554173
G Son Son DNA binding protein JBrowse link 11 31,806,598 31,837,769 RGD:11554173
G Sox11 SRY-box transcription factor 11 JBrowse link 6 46,629,967 46,631,988 RGD:11554173
G Sox4 SRY-box transcription factor 4 JBrowse link 17 37,615,022 37,619,728 RGD:11554173
G Srcap Snf2-related CREBBP activator protein JBrowse link 1 198,957,764 199,007,576 RGD:11554173
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 JBrowse link 8 36,264,741 36,314,811 RGD:11554173
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:8554872
G Tlk1 tousled-like kinase 1 JBrowse link 3 57,012,738 57,376,336 RGD:11554173
G Top2a DNA topoisomerase II alpha JBrowse link 10 86,901,467 86,930,947 RGD:11554173
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:8547828
RGD:8554872
RGD:11554173
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 JBrowse link 9 10,738,211 10,758,403 RGD:11554173
G Vcan versican JBrowse link 2 18,490,102 18,587,340 RGD:11554173
G Wnt5b Wnt family member 5B JBrowse link 4 151,500,962 151,516,894 RGD:11554173
G Xrn2 5'-3' exoribonuclease 2 JBrowse link 3 141,224,858 141,298,272 RGD:11041796
Adult Pancreatic Cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:11554173
anus benign neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifnb1 interferon beta 1 JBrowse link 5 106,865,192 106,865,746 RGD:11554173
appendiceal neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nap1l1 nucleosome assembly protein 1-like 1 JBrowse link 7 54,213,305 54,237,880 RGD:9590083
ascending colon cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:8554872
Attenuated Adenomatous Polyposis Coli term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
G Galnt12 polypeptide N-acetylgalactosaminyltransferase 12 JBrowse link 5 62,718,733 62,751,345 RGD:8554872
Barrett's adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 JBrowse link 1 256,382,861 256,386,729 RGD:13782259
bile duct cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apob apolipoprotein B JBrowse link 6 33,176,826 33,216,381 RGD:2317550
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:2317550
G Tjp1 tight junction protein 1 JBrowse link 1 126,146,489 126,515,359 RGD:2325030
bile duct carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Msln mesothelin JBrowse link 10 15,119,700 15,129,129 RGD:2326059
Bile Duct Neoplasms term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asph aspartate-beta-hydroxylase JBrowse link 5 22,577,680 22,799,333 RGD:2325824
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:11554173
G Fscn1 fascin actin-bundling protein 1 JBrowse link 12 13,655,459 13,668,595 RGD:2317786
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:2317166
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:2317585
G Mgmt O-6-methylguanine-DNA methyltransferase JBrowse link 1 209,237,255 209,464,189 RGD:2317662
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:2317706
G Muc16 mucin 16, cell surface associated JBrowse link 8 18,438,838 18,639,777 RGD:2325134
G Muc4 mucin 4, cell surface associated JBrowse link 11 71,242,973 71,285,217 RGD:2324929
G Ncam1 neural cell adhesion molecule 1 JBrowse link 8 53,836,797 54,134,881 RGD:2326077
RGD:2326076
G Runx3 RUNX family transcription factor 3 JBrowse link 5 153,507,093 153,531,137 RGD:2324957
biliary tract benign neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:2325676
G Ctps1 CTP synthase 1 JBrowse link 5 139,475,934 139,505,065 RGD:2317903
G Elf3 E74 like ETS transcription factor 3 JBrowse link 13 52,083,873 52,088,798 RGD:11554173
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:2317743
RGD:2317742
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:2317903
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:2317263
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:2317165
G Mdm2 MDM2 proto-oncogene JBrowse link 7 60,719,060 60,743,618 RGD:2317415
G Mtap methylthioadenosine phosphorylase JBrowse link 5 107,711,077 107,777,530 RGD:2317953
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:2317987
G Muc4 mucin 4, cell surface associated JBrowse link 11 71,242,973 71,285,217 RGD:2324916
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming JBrowse link 1 214,725,482 214,756,653 RGD:2324916
G Prkacb protein kinase cAMP-activated catalytic subunit beta JBrowse link 2 252,602,197 252,691,886 RGD:11554173
biliary tract cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apob apolipoprotein B JBrowse link 6 33,176,826 33,216,381 RGD:2325763
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:2317210
G Ppard peroxisome proliferator-activated receptor delta JBrowse link 20 7,818,289 7,883,482 RGD:2324871
Blue Rubber Bleb Nevus Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Glmn glomulin, FKBP associated protein JBrowse link 14 3,204,390 3,247,703 RGD:8554872
Carney Triad term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sdha succinate dehydrogenase complex flavoprotein subunit A JBrowse link 1 31,545,631 31,570,601 RGD:8554872
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link 5 159,484,378 159,505,063 RGD:8554872
G Sdhc succinate dehydrogenase complex subunit C JBrowse link 13 89,498,047 89,518,979 RGD:8554872
Carney-Stratakis syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link 5 159,484,378 159,505,063 RGD:7240710
RGD:8554872
G Sdhc succinate dehydrogenase complex subunit C JBrowse link 13 89,498,047 89,518,979 RGD:7240710
RGD:8554872
G Sdhd succinate dehydrogenase complex subunit D JBrowse link 8 55,028,125 55,037,604 RGD:7240710
RGD:8554872
Cecal Neoplasms term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:11554173
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:11554173
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:11554173
G Krt20 keratin 20 JBrowse link 10 87,342,514 87,351,045 RGD:11554173
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
cholangiocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:2317508
G Adrb2 adrenoceptor beta 2 JBrowse link 18 57,513,792 57,515,834 RGD:2325640
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:2325682
RGD:2325679
RGD:2325680
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:2317521
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:2325728
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:2317198
RGD:2317205
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:2325756
G Arid1a AT-rich interaction domain 1A JBrowse link 5 151,904,687 151,977,973 RGD:11554173
G Asph aspartate-beta-hydroxylase JBrowse link 5 22,577,680 22,799,333 RGD:6902945
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:11554173
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:2317417
G Cycs cytochrome c, somatic JBrowse link 4 80,331,226 80,333,326 RGD:2317615
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:11554173
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:10400912
G Epor erythropoietin receptor JBrowse link 8 22,969,737 22,974,468 RGD:10400912
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:11554173
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:2317746
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:2317765
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link 1 200,590,951 200,696,946 RGD:11554173
G Fscn1 fascin actin-bundling protein 1 JBrowse link 12 13,655,459 13,668,595 RGD:2317780
G Gnas GNAS complex locus JBrowse link 3 172,374,957 172,434,988 RGD:1601377
RGD:11554173
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:14700980
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:2317198
RGD:14401711
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:9681560
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:2317925
RGD:2317909
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 JBrowse link 9 71,882,108 71,911,645 RGD:11554173
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 JBrowse link 1 141,874,354 141,893,674 RGD:11554173
G Il4r interleukin 4 receptor JBrowse link 1 196,942,343 196,967,221 RGD:2317263
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:2317167
RGD:14975292
RGD:11554173
G Kmt2c lysine methyltransferase 2C JBrowse link 4
4
82,506
6,083,650
109,986
6,294,413
RGD:11554173
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:11554173
G Krt7 keratin 7 JBrowse link 7 143,059,731 143,075,907 RGD:2317308
G Mdm2 MDM2 proto-oncogene JBrowse link 7 60,719,060 60,743,618 RGD:2317417
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:2317601
RGD:2317578
G Mgmt O-6-methylguanine-DNA methyltransferase JBrowse link 1 209,237,255 209,464,189 RGD:2317632
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:2317705
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:2324667
RGD:2325769
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:2325856
RGD:2324667
G Msln mesothelin JBrowse link 10 15,119,700 15,129,129 RGD:11554173
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:2317119
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:2324622
RGD:2324664
RGD:2324667
RGD:2324638
RGD:2317986
G Muc16 mucin 16, cell surface associated JBrowse link 8 18,438,838 18,639,777 RGD:2325142
G Muc2 mucin 2, oligomeric mucus/gel-forming JBrowse link 1 214,663,929 214,693,197 RGD:2324948
G Muc3 mucin 3, intestinal JBrowse link 12 22,535,663 22,584,775 RGD:2324948
G Muc4 mucin 4, cell surface associated JBrowse link 11 71,242,973 71,285,217 RGD:2324944
RGD:2303602
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming JBrowse link 1 214,725,482 214,756,653 RGD:2324990
RGD:2324948
G Muc5b mucin 5B, oligomeric mucus/gel-forming JBrowse link 1 214,778,459 214,811,237 RGD:2324948
G Muc6 mucin 6, oligomeric mucus/gel-forming JBrowse link 1 214,608,453 214,630,524 RGD:2325167
G Nat2 N-acetyltransferase 2 JBrowse link 16 23,960,709 23,991,570 RGD:2317172
G Ncam1 neural cell adhesion molecule 1 JBrowse link 8 53,836,797 54,134,881 RGD:2326079
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:2325280
RGD:11554173
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:2325330
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link 4 145,282,828 145,289,367 RGD:2317134
RGD:2317136
G Pawr pro-apoptotic WT1 regulator JBrowse link 7 51,273,764 51,353,700 RGD:9835357
G Pbrm1 polybromo 1 JBrowse link 16 7,103,714 7,202,899 RGD:11554173
G Peg3 paternally expressed 3 JBrowse link 1 70,210,810 70,237,450 RGD:11554173
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:11554173
G Prkacb protein kinase cAMP-activated catalytic subunit beta JBrowse link 2 252,602,197 252,691,886 RGD:11554173
G Prss2 protease, serine, 2 JBrowse link 4 70,689,737 70,694,816 RGD:2324908
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:11554173
RGD:12802341
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:2317180
RGD:11554173
G Reg1a regenerating family member 1 alpha JBrowse link 4 109,497,962 109,500,626 RGD:10044031
G Rnf43 ring finger protein 43 JBrowse link 10 74,956,411 75,028,951 RGD:11554173
G Robo2 roundabout guidance receptor 2 JBrowse link 11 11,062,866 12,618,793 RGD:11554173
G Runx3 RUNX family transcription factor 3 JBrowse link 5 153,507,093 153,531,137 RGD:2324955
G Slc5a5 solute carrier family 5 member 5 JBrowse link 16 20,297,414 20,307,401 RGD:11554173
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:11554173
G Sox17 SRY-box transcription factor 17 JBrowse link 5 14,890,318 14,895,907 RGD:4889598
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:2325020
RGD:1299231
G Tgfbr2 transforming growth factor, beta receptor 2 JBrowse link 8 124,310,288 124,399,345 RGD:1299231
G Thbs1 thrombospondin 1 JBrowse link 3 109,862,120 109,873,466 RGD:2325027
RGD:2325026
RGD:2325024
G Tnc tenascin C JBrowse link 5 79,789,686 79,874,555 RGD:4889598
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
G Ugt1a9 UDP glucuronosyltransferase family 1 member A9 JBrowse link 9 95,161,157 95,302,822 RGD:2325161
colon adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa7 annexin A7 JBrowse link 15 4,254,470 4,281,296 RGD:2292654
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:1601201
RGD:8554872
G ApcPirc APC, WNT signaling pathway regulator; polyposis in the rat colon RGD:1601201
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:734633
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:10450245
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1599637
G Daxx death-domain associated protein JBrowse link 20 5,480,103 5,485,962 RGD:9587838
G Fech ferrochelatase JBrowse link 18 59,941,992 59,975,192 RGD:14700888
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:10402080
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:13210775
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:13210775
G Mgmt O-6-methylguanine-DNA methyltransferase JBrowse link 1 209,237,255 209,464,189 RGD:1599637
G Msh6 mutS homolog 6 JBrowse link 6 11,644,565 11,662,389 RGD:8554872
G Pcsk5 proprotein convertase subtilisin/kexin type 5 JBrowse link 1 236,031,988 236,313,858 RGD:11556207
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:5685670
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 JBrowse link 5 135,069,972 135,145,633 RGD:13432053
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:13432049
RGD:13432051
G Rad54l RAD54 like JBrowse link 5 134,948,511 134,978,125 RGD:8554872
G Srsf4 serine and arginine rich splicing factor 4 JBrowse link 5 150,032,999 150,060,769 RGD:11039405
G Srsf5 serine and arginine rich splicing factor 5 JBrowse link 6 104,611,026 104,640,033 RGD:11039405
G Srsf6 serine and arginine rich splicing factor 6 JBrowse link 3 159,305,345 159,310,668 RGD:11039405
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:11038656
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:13432089
G Vegfc vascular endothelial growth factor C JBrowse link 16 40,440,371 40,555,178 RGD:2315488
colon adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chka choline kinase alpha JBrowse link 1 219,076,618 219,126,221 RGD:10401945
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:10449102
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:13432048
colon cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actr1a actin related protein 1A JBrowse link 1 266,123,864 266,142,621 RGD:13831341
G Acvr2a activin A receptor type 2A JBrowse link 3 32,947,901 33,034,598 RGD:2301065
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:8554872
G Akt3 AKT serine/threonine kinase 3 JBrowse link 13 95,076,308 95,348,913 RGD:13209140
G Apaf1 apoptotic peptidase activating factor 1 JBrowse link 7 31,699,309 31,784,192 RGD:13703116
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
G Apcm1Kyo APC, WNT signaling pathway regulator; mutant 1, Kyo RGD:12792250
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 JBrowse link 4 155,386,367 155,414,034 RGD:625559
G Bad BCL2-associated agonist of cell death JBrowse link 1 222,198,516 222,207,459 RGD:10053668
G Bcl10 BCL10, immune signaling adaptor JBrowse link 2 251,805,392 251,814,957 RGD:8554872
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:10053668
G Bik BCL2-interacting killer JBrowse link 7 124,390,924 124,410,449 RGD:14394819
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:8554872
G Brca1 BRCA1, DNA repair associated JBrowse link 10 89,394,821 89,455,093 RGD:1599497
G Brd4 bromodomain containing 4 JBrowse link 7 14,222,101 14,303,055 RGD:9586351
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:13209142
RGD:13209143
G Casp7 caspase 7 JBrowse link 1 277,190,557 277,242,779 RGD:13209143
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:5135051
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:5135051
G Ccnd2 cyclin D2 JBrowse link 4 159,674,885 159,697,207 RGD:2289181
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:8554872
G Chaf1a chromatin assembly factor 1 subunit A JBrowse link 9 11,000,869 11,027,631 RGD:9587457
G Chka choline kinase alpha JBrowse link 1 219,076,618 219,126,221 RGD:10401869
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:6903278
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:8554872
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:14700924
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:8694174
G Fgfr3 fibroblast growth factor receptor 3 JBrowse link 14 82,272,322 82,287,739 RGD:8554872
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:8554872
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 3 105,203,309 105,214,989 RGD:8554872
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:10045586
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 JBrowse link 1 191,344,979 191,474,143 RGD:2317633
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 16 74,177,233 74,230,809 RGD:7495781
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11534627
G Kdm3a lysine demethylase 3A JBrowse link 4 99,503,160 99,547,315 RGD:9590225
G Lcn2 lipocalin 2 JBrowse link 3 11,414,189 11,417,534 RGD:2316492
G Map2k3 mitogen activated protein kinase kinase 3 JBrowse link 10 45,089,455 45,110,802 RGD:7495808
G Mir126b microRNA 126b JBrowse link 3 4,042,488 4,042,560 RGD:13432043
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:8554872
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:2316492
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:8554872
G Mt-co1 mitochondrially encoded cytochrome c oxidase I JBrowse link MT 5,323 6,867 RGD:8554872
G Mt-co2 mitochondrially encoded cytochrome c oxidase II JBrowse link MT 7,006 7,689 RGD:8554872
G Mt-cyb mitochondrially encoded cytochrome b JBrowse link MT 14,136 15,278 RGD:8554872
G Mt-nd4l mitochondrially encoded NADH 4L dehydrogenase JBrowse link MT 9,870 10,166 RGD:8554872
G Mtus1 microtubule associated scaffold protein 1 JBrowse link 16 54,240,892 54,386,131 RGD:2317016
G Muc2 mucin 2, oligomeric mucus/gel-forming JBrowse link 1 214,663,929 214,693,197 RGD:7349368
RGD:7349371
G Mutyh mutY DNA glycosylase JBrowse link 5 135,663,328 135,675,348 RGD:8554872
G Nanog Nanog homeobox JBrowse link 4 155,531,906 155,539,268 RGD:7240527
G Ncoa6 nuclear receptor coactivator 6 JBrowse link 3 150,919,317 150,990,391 RGD:9590137
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:5133247
G Nras NRAS proto-oncogene, GTPase JBrowse link 2 205,553,119 205,563,716 RGD:8554872
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:8554872
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 JBrowse link 16 20,415,109 20,424,982 RGD:13432043
G Pik3r5 phosphoinositide-3-kinase, regulatory subunit 5 JBrowse link 10 55,013,686 55,078,986 RGD:13432047
G Pms2 PMS1 homolog 2, mismatch repair system component JBrowse link 12 12,714,394 12,738,654 RGD:8554872
G Pold1 DNA polymerase delta 1, catalytic subunit JBrowse link 1 100,538,066 100,554,105 RGD:8554872
G Pole DNA polymerase epsilon, catalytic subunit JBrowse link 12 52,403,533 52,452,075 RGD:8554872
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:1601444
RGD:8554872
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 2 54,857,688 54,893,404 RGD:5685669
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:12859043
G Ptger3 prostaglandin E receptor 3 JBrowse link 2 263,895,093 263,979,682 RGD:9850265
G Ptpn12 protein tyrosine phosphatase, non-receptor type 12 JBrowse link 4 10,631,129 10,702,390 RGD:8554872
G Ptprj protein tyrosine phosphatase, receptor type, J JBrowse link 3 79,233,519 79,390,956 RGD:8554872
G Rad54b RAD54 homolog B JBrowse link 5 25,140,531 25,214,469 RGD:8554872
G Reg1a regenerating family member 1 alpha JBrowse link 4 109,497,962 109,500,626 RGD:9850131
G Scg5 secretogranin V JBrowse link 3 105,235,065 105,279,475 RGD:8554872
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:1601371
RGD:8554872
G Srsf1 serine and arginine rich splicing factor 1 JBrowse link 10 75,334,200 75,341,197 RGD:11038730
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link 8 119,215,266 119,220,909 RGD:11561894
G Tff3 trefoil factor 3 JBrowse link 20 9,850,800 9,855,481 RGD:7349371
G Tgfb3 transforming growth factor, beta 3 JBrowse link 6 109,913,757 109,936,217 RGD:13432091
G Tgfbr2 transforming growth factor, beta receptor 2 JBrowse link 8 124,310,288 124,399,345 RGD:2301065
RGD:8554872
G Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b JBrowse link 15 51,433,853 51,464,215 RGD:2325778
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:8554872
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:5135051
G Xrcc2 X-ray repair cross complementing 2 JBrowse link 4 5,842,013 5,860,516 RGD:8554872
colon carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:8554872
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
G Axin2 axin 2 JBrowse link 10 97,212,483 97,238,824 RGD:8554872
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:8554872
G Bcl10 BCL10, immune signaling adaptor JBrowse link 2 251,805,392 251,814,957 RGD:8554872
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:11567267
RGD:8554872
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:8554872
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 10 73,507,009 73,632,742 RGD:8554872
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase JBrowse link 3 120,373,604 120,404,910 RGD:8554872
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 3 110,367,949 110,420,471 RGD:8554872
G Crkl CRK like proto-oncogene, adaptor protein JBrowse link 11 87,338,606 87,356,644 RGD:7488899
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:8554872
G Cxcl6 C-X-C motif chemokine ligand 6 JBrowse link 14 18,860,201 18,920,839 RGD:5135268
G Dcc DCC netrin 1 receptor JBrowse link 18 66,518,213 67,629,801 RGD:8554872
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:8554872
G Fancc FA complementation group C JBrowse link 17 826,512 955,703 RGD:8554872
G Fance FA complementation group E JBrowse link 20 7,888,927 7,906,142 RGD:8554872
G Fgfr3 fibroblast growth factor receptor 3 JBrowse link 14 82,272,322 82,287,739 RGD:8554872
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:8554872
G Flt1 FMS-related tyrosine kinase 1 JBrowse link 12 9,033,993 9,205,886 RGD:8554872
G Flt3lg fms-related tyrosine kinase 3 ligand JBrowse link 1 101,126,006 101,131,413 RGD:11049504
G Flt4 fms-related tyrosine kinase 4 JBrowse link 10 35,078,782 35,120,296 RGD:8554872
G Hpgd 15-hydroxyprostaglandin dehydrogenase JBrowse link 16 37,457,134 37,495,758 RGD:5688759
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:14985218
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:8554872
G Mcc MCC regulator of WNT signaling pathway JBrowse link 18
1
35,683,185
12,006,663
35,817,117
12,128,849
RGD:8554872
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:8554872
G Mlh3 mutL homolog 3 JBrowse link 6 109,059,386 109,095,876 RGD:8554872
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:8554872
G Mt-nd1 mitochondrially encoded NADH dehydrogenase 1 JBrowse link MT 2,740 3,694 RGD:8554872
G Mutyh mutY DNA glycosylase JBrowse link 5 135,663,328 135,675,348 RGD:8554872
G Nras NRAS proto-oncogene, GTPase JBrowse link 2 205,553,119 205,563,716 RGD:8554872
G Pdgfrl platelet-derived growth factor receptor-like JBrowse link 16 54,386,269 54,450,426 RGD:8554872
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:8554872
G Pold1 DNA polymerase delta 1, catalytic subunit JBrowse link 1 100,538,066 100,554,105 RGD:8554872
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:8554872
G Prf1 perforin 1 JBrowse link 20 30,915,294 30,920,804 RGD:6482822
G Ptpn12 protein tyrosine phosphatase, non-receptor type 12 JBrowse link 4 10,631,129 10,702,390 RGD:8554872
G Ptprj protein tyrosine phosphatase, receptor type, J JBrowse link 3 79,233,519 79,390,956 RGD:8554872
G Rad54b RAD54 homolog B JBrowse link 5 25,140,531 25,214,469 RGD:8554872
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit JBrowse link 20 44,803,664 44,961,362 RGD:8554872
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:13432074
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:13432074
RGD:13432084
G Tnfrsf17 TNF receptor superfamily member 17 JBrowse link 10 4,252,097 4,258,335 RGD:2317311
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:5131434
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:5131434
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:8554872
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:5133430
G Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 JBrowse link 16 20,668,925 20,671,127 RGD:11352739
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:15003195
Colonic Neoplasms term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A2m alpha-2-macroglobulin JBrowse link 4 154,309,426 154,359,138 RGD:11554173
G Acta2 actin alpha 2, smooth muscle JBrowse link 1 252,537,614 252,550,394 RGD:11554173
G Actg2 actin gamma 2, smooth muscle JBrowse link 4 115,215,160 115,239,746 RGD:11554173
G Aldh1b1 aldehyde dehydrogenase 1 family, member B1 JBrowse link 5 61,382,351 61,387,359 RGD:11554173
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:11554173
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:11554173
RGD:12792250
G Ascl2 achaete-scute family bHLH transcription factor 2 JBrowse link 1 216,154,002 216,156,409 RGD:11554173
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:11554173
G Axin2 axin 2 JBrowse link 10 97,212,483 97,238,824 RGD:11554173
G Bak1 BCL2-antagonist/killer 1 JBrowse link 20 5,609,620 5,618,899 RGD:11554173
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:11554173
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:11554173
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:2293078
RGD:11554173
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:11554173
G Birc5 baculoviral IAP repeat-containing 5 JBrowse link 10 106,856,097 106,864,419 RGD:11554173
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:8554872
G Brd4 bromodomain containing 4 JBrowse link 7 14,222,101 14,303,055 RGD:11554173
G Ca4 carbonic anhydrase 4 JBrowse link 10 72,272,286 72,281,069 RGD:11554173
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 JBrowse link 4 15,706,974 16,130,848 RGD:11554173
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:13209144
G Cbr1 carbonyl reductase 1 JBrowse link 11 33,813,041 33,815,418 RGD:11554173
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:8548881
G Ccl20 C-C motif chemokine ligand 20 JBrowse link 9 88,918,359 88,921,017 RGD:11554173
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:11554173
G Ccnd2 cyclin D2 JBrowse link 4 159,674,885 159,697,207 RGD:11554173
G Ccne1 cyclin E1 JBrowse link 1 94,485,830 94,495,112 RGD:2289293
G Ccnh cyclin H JBrowse link 2 13,593,100 13,613,910 RGD:11554173
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:5490978
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:11554173
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:1600823
G Cdx2 caudal type homeo box 2 JBrowse link 12 9,464,026 9,470,565 RGD:11554173
G Ckm creatine kinase, M-type JBrowse link 1 80,321,507 80,331,841 RGD:11554173
G Col18a1 collagen type XVIII alpha 1 chain JBrowse link 20 12,225,202 12,332,858 RGD:1600901
G Cp ceruloplasmin JBrowse link 2 104,744,249 104,803,034 RGD:11554173
G Cryab crystallin, alpha B JBrowse link 8 55,178,543 55,182,546 RGD:11554173
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:11554173
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link 14 17,210,733 17,212,930 RGD:11554173
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 JBrowse link 1 256,382,861 256,386,729 RGD:11554173
G Defa5 defensin alpha 5 JBrowse link 16 75,338,050 75,340,401 RGD:11554173
G Defal1 defensin alpha-like 1 JBrowse link 16 75,366,925 75,367,985 RGD:11554173
G Dmbt1 deleted in malignant brain tumors 1 JBrowse link 1
1
201,620,642
203,149,414
201,689,905
203,228,705
RGD:11554173
G Dnmt1 DNA methyltransferase 1 JBrowse link 8 21,922,515 21,968,495 RGD:9588972
RGD:11554173
G Dpyd dihydropyrimidine dehydrogenase JBrowse link 2 221,823,692 222,694,627 RGD:11554173
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:11554173
G Eif3i eukaryotic translation initiation factor 3, subunit I JBrowse link 5 147,796,580 147,803,853 RGD:11554173
G Eomes eomesodermin JBrowse link 8 127,144,367 127,152,618 RGD:11554173
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:11554173
G Erbb3 erb-b2 receptor tyrosine kinase 3 JBrowse link 7 2,989,202 3,010,610 RGD:8554872
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:11554173
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:1600355
G Fbp1 fructose-bisphosphatase 1 JBrowse link 17 396,175 417,480 RGD:11554173
G Folr1 folate receptor alpha JBrowse link 1 166,934,457 166,945,864 RGD:11554173
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:13210752
G Fzd2 frizzled class receptor 2 JBrowse link 10 90,550,147 90,552,057 RGD:11554173
G Gap43 growth associated protein 43 JBrowse link 11 58,624,198 58,717,916 RGD:11554173
G Gast gastrin JBrowse link 10 88,245,532 88,248,485 RGD:11554173
G Gcg glucagon JBrowse link 3 48,442,635 48,451,650 RGD:11554173
G Grik2 glutamate ionotropic receptor kainate type subunit 2 JBrowse link 20 53,791,428 54,517,691 RGD:11554173
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:13210765
RGD:13210769
G Gstm3l glutathione S-transferase mu 3-like JBrowse link 2 210,761,729 210,766,501 RGD:11554173
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 JBrowse link 2 181,045,694 181,103,321 RGD:11554173
G Hdac2 histone deacetylase 2 JBrowse link 20 43,084,870 43,108,198 RGD:9590193
RGD:9590331
G Hes1 hes family bHLH transcription factor 1 JBrowse link 11 74,312,837 74,315,249 RGD:11554173
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:10395382
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 JBrowse link 2 200,452,623 200,480,785 RGD:11554173
G Hspa2 heat shock protein family A (Hsp70) member 2 JBrowse link 6 99,433,575 99,436,288 RGD:11554173
G Hspb1 heat shock protein family B (small) member 1 JBrowse link 12 23,839,390 23,841,051 RGD:11554173
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:11554173
G Id3 inhibitor of DNA binding 3, HLH protein JBrowse link 5 154,489,603 154,491,172 RGD:11554173
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:11554173
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:11554173
G Igfbp1 insulin-like growth factor binding protein 1 JBrowse link 14 87,448,716 87,453,783 RGD:11554173
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:11554173
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:11554173
G Itga7 integrin subunit alpha 7 JBrowse link 7 3,355,079 3,383,886 RGD:11554173
G Itih4 inter-alpha-trypsin inhibitor heavy chain 4 JBrowse link 16 6,970,367 6,985,538 RGD:11554173
G Jak3 Janus kinase 3 JBrowse link 16 20,107,471 20,120,678 RGD:11533940
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:11554173
G Kcnh2 potassium voltage-gated channel subfamily H member 2 JBrowse link 4 7,355,066 7,387,282 RGD:11554173
G Kdm1a lysine demethylase 1A JBrowse link 5 154,909,003 154,965,171 RGD:11554173
G Kdm5b lysine demethylase 5B JBrowse link 13 51,384,371 51,455,392 RGD:11554173
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:5684533
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:11554173
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:11554173
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:11554173
G Lgr5 leucine rich repeat containing G protein coupled receptor 5 JBrowse link 7 58,447,097 58,587,787 RGD:11554173
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:11554173
G Lrg1 leucine-rich alpha-2-glycoprotein 1 JBrowse link 9 10,952,424 10,954,664 RGD:11554173
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:11554173
G Maob monoamine oxidase B JBrowse link X 6,430,694 6,533,520 RGD:11554173
G Map2k6 mitogen-activated protein kinase kinase 6 JBrowse link 10 98,707,160 98,823,054 RGD:11554173
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:13217412
RGD:13217414
G Mcm2 minichromosome maintenance complex component 2 JBrowse link 4 120,825,699 120,840,221 RGD:11554173
G Mecom MDS1 and EVI1 complex locus JBrowse link 2 117,396,084 117,993,604 RGD:11554173
G Men1 menin 1 JBrowse link 1 221,704,394 221,710,343 RGD:1304318
G Mep1a meprin A subunit alpha JBrowse link 9 20,048,163 20,077,678 RGD:11554173
G Mir223 microRNA 223 JBrowse link X 65,367,812 65,367,921 RGD:11554173
G Mir98 microRNA 98 JBrowse link X 21,583,875 21,583,982 RGD:11554173
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:6483523
RGD:11554173
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:11554173
G Mmp12 matrix metallopeptidase 12 JBrowse link 8 5,594,717 5,616,494 RGD:11554173
G Mmp7 matrix metallopeptidase 7 JBrowse link 8 5,893,253 5,900,965 RGD:11554173
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:2325778
RGD:11554173
RGD:5135051
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:2317740
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:11554173
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:11554173
G Mutyh mutY DNA glycosylase JBrowse link 5 135,663,328 135,675,348 RGD:11554173
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:7240527
RGD:11554173
G Ndrg2 NDRG family member 2 JBrowse link 15 28,305,820 28,314,459 RGD:11554173
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:11554173
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:5131515
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:11554173
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:11554173
G Nox1 NADPH oxidase 1 JBrowse link X 104,909,328 104,932,508 RGD:11554173
G Nox4 NADPH oxidase 4 JBrowse link 1 150,796,359 150,976,186 RGD:11554173
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:11554173
G Oxt oxytocin/neurophysin I prepropeptide JBrowse link 3 123,106,694 123,107,534 RGD:11554173
G Parp4 poly (ADP-ribose) polymerase family, member 4 JBrowse link 15 36,809,362 36,911,167 RGD:11554173
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:11554173
G Pcp4 Purkinje cell protein 4 JBrowse link 11 36,851,035 36,912,272 RGD:11554173
G Pdcd1 programmed cell death 1 JBrowse link 9 101,305,742 101,319,937 RGD:9589070
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:2292176
G Pecam1 platelet and endothelial cell adhesion molecule 1 JBrowse link 10 94,850,971 94,913,202 RGD:6771355
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 2 31,742,326 31,826,882 RGD:2290476
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 JBrowse link 16 20,415,109 20,424,982 RGD:13432042
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:7241262
RGD:7241805
G Plcb1 phospholipase C beta 1 JBrowse link 3 127,721,244 128,419,565 RGD:11554173
G Pms2 PMS1 homolog 2, mismatch repair system component JBrowse link 12 12,714,394 12,738,654 RGD:1599141
G Polb DNA polymerase beta JBrowse link 16 74,237,001 74,260,272 RGD:11554173
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:11554173
G Prf1 perforin 1 JBrowse link 20 30,915,294 30,920,804 RGD:6482812
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:11554173
G Prom1 prominin 1 JBrowse link 14 71,532,321 71,637,400 RGD:11554173
G Ptger3 prostaglandin E receptor 3 JBrowse link 2 263,895,093 263,979,682 RGD:9850265
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:5135051
RGD:11554173
G Ptp4a3 protein tyrosine phosphatase 4A3 JBrowse link 7 114,969,699 115,002,902 RGD:11554173
G RatNP-3b defensin RatNP-3 precursor JBrowse link 16 75,528,348 75,530,511 RGD:11554173
G Rcor1 REST corepressor 1 JBrowse link 6 135,475,470 135,552,155 RGD:11554173
G Reck reversion-inducing-cysteine-rich protein with kazal motifs JBrowse link 5 59,348,568 59,415,169 RGD:11554173
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:11554173
G Rfc1 replication factor C subunit 1 JBrowse link 14 44,627,528 44,702,205 RGD:11554173
G RGD1562136 similar to D1Ertd622e protein JBrowse link 9 111,327,333 111,347,428 RGD:11554173
G Rhoj ras homolog family member J JBrowse link 6 98,284,361 98,367,122 RGD:11554173
G Rnf34 ring finger protein 34 JBrowse link 12 39,164,290 39,185,209 RGD:11554173
G Runx3 RUNX family transcription factor 3 JBrowse link 5 153,507,093 153,531,137 RGD:2302551
G S100a4 S100 calcium-binding protein A4 JBrowse link 2 189,997,278 189,999,587 RGD:11554173
G S100a9 S100 calcium binding protein A9 JBrowse link 2 190,097,436 190,100,209 RGD:11554173
G Serpinb5 serpin family B member 5 JBrowse link 13 26,903,052 26,923,250 RGD:11554173
G Sertad1 SERTA domain containing 1 JBrowse link 1 84,293,102 84,296,370 RGD:11554173
G Sh3kbp1 SH3 domain-containing kinase-binding protein 1 JBrowse link X 37,790,004 38,196,365 RGD:11554173
G Slc16a1 solute carrier family 16 member 1 JBrowse link 2 207,108,552 207,129,352 RGD:11554173
G Slc19a1 solute carrier family 19 member 1 JBrowse link 20 12,334,675 12,354,517 RGD:11554173
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:11554173
G Slc2a1 solute carrier family 2 member 1 JBrowse link 5 138,154,677 138,182,897 RGD:11554173
G Slc5a8 solute carrier family 5 member 8 JBrowse link 7 29,434,175 29,476,807 RGD:11554173
G Slco1b2 solute carrier organic anion transporter family, member 1B2 JBrowse link 4 175,814,118 175,881,775 RGD:11554173
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Sparc secreted protein acidic and cysteine rich JBrowse link 10 40,742,390 40,764,232 RGD:11554173
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:11554173
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:11554173
G Sult1a1 sulfotransferase family 1A member 1 JBrowse link 1 198,100,586 198,104,106 RGD:11554173
G Tagln transgelin JBrowse link 8 50,222,895 50,228,369 RGD:11554173
G Tcf19 transcription factor 19 JBrowse link 20 3,740,454 3,746,964 RGD:11554173
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:11554173
G Tgfbr2 transforming growth factor, beta receptor 2 JBrowse link 8 124,310,288 124,399,345 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b JBrowse link 15 51,433,853 51,464,215 RGD:11554173
G Tnfrsf9 TNF receptor superfamily member 9 JBrowse link 5 168,009,245 168,035,813 RGD:11554173
G Tnfsf10 TNF superfamily member 10 JBrowse link 2 113,008,008 113,026,899 RGD:11554173
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
RGD:8554872
G Tp53bp1 tumor protein p53 binding protein 1 JBrowse link 3 113,160,030 113,259,701 RGD:11554173
G Tpm3 tropomyosin 3 JBrowse link 2 189,423,534 189,451,340 RGD:11554173
G Trmt11 tRNA methyltransferase 11 homolog JBrowse link 1 29,432,109 29,576,079 RGD:11554173
G Tymp thymidine phosphorylase JBrowse link 7 130,342,481 130,347,845 RGD:11554173
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:11554173
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 JBrowse link 9 10,738,211 10,758,403 RGD:9587430
G Umps uridine monophosphate synthetase JBrowse link 11 70,034,181 70,044,590 RGD:11554173
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:5684533
RGD:11554173
G Wt1 WT1 transcription factor JBrowse link 3 95,133,221 95,180,574 RGD:11554173
G Xaf1 XIAP associated factor 1 JBrowse link 10 58,860,647 58,872,782 RGD:11554173
G Xdh xanthine dehydrogenase JBrowse link 6 25,149,570 25,211,273 RGD:13210519
G Ybx1 Y box binding protein 1 JBrowse link 5 138,319,754 138,336,721 RGD:11554173
colorectal adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:2312343
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B JBrowse link 4 22,225,123 22,307,577 RGD:1598563
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:11049173
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:11353854
G Bcl2l2 Bcl2-like 2 JBrowse link 15 33,543,774 33,549,165 RGD:14394422
G Birc7 baculoviral IAP repeat-containing 7 JBrowse link 3 176,438,335 176,443,864 RGD:13217408
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:11567230
G Brd8 bromodomain containing 8 JBrowse link 18 27,375,645 27,423,989 RGD:9587763
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:2289356
G Dnmt3b DNA methyltransferase 3 beta JBrowse link 3 149,131,541 149,170,061 RGD:9589082
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:13210753
G Gata6 GATA binding protein 6 JBrowse link 18 2,415,821 2,447,087 RGD:13208874
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:13210767
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:14700996
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:14700996
RGD:14701003
G Hpca hippocalcin JBrowse link 5 147,295,124 147,305,757 RGD:9693683
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:13210753
G Kcnh1 potassium voltage-gated channel subfamily H member 1 JBrowse link 13 110,920,712 111,232,291 RGD:9693694
G Kmt2b lysine methyltransferase 2B JBrowse link 1 89,022,889 89,042,176 RGD:9588601
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:13210782
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:13210782
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:13217408
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 4 147,532,040 147,592,769 RGD:13217408
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:13210753
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:2317418
G Utp23 UTP23, small subunit processome component JBrowse link 7 91,384,329 91,389,605 RGD:11041896
colorectal adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
G Birc7 baculoviral IAP repeat-containing 7 JBrowse link 3 176,438,335 176,443,864 RGD:13217408
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:13210753
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:7495820
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:7495820
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:13210753
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:13217408
RGD:13217413
G Mir224 microRNA 224 JBrowse link X 152,223,754 152,223,835 RGD:14398749
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:8554872
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 4 147,532,040 147,592,769 RGD:13217408
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:13217413
colorectal cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrb1 adhesion G protein-coupled receptor B1 JBrowse link 7 115,766,484 115,828,514 RGD:13831353
G Akap9 A-kinase anchoring protein 9 JBrowse link 4 27,195,346 27,331,582 RGD:8554872
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1643334
RGD:8554872
RGD:13592920
RGD:13209139
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:2313394
G Antxr1 ANTXR cell adhesion molecule 1 JBrowse link 4 118,946,267 119,131,202 RGD:9684945
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:13592920
RGD:8554872
G Arid1a AT-rich interaction domain 1A JBrowse link 5 151,904,687 151,977,973 RGD:8554872
G Atf7 activating transcription factor 7 JBrowse link 7 144,131,382 144,223,463 RGD:11055686
G Axin2 axin 2 JBrowse link 10 97,212,483 97,238,824 RGD:13592920
RGD:8554872
G Bambi BMP and activin membrane-bound inhibitor JBrowse link 17 56,905,419 56,909,675 RGD:14390154
RGD:14390156
G Barhl2 BarH-like homeobox 2 JBrowse link 14 4,362,717 4,367,614 RGD:14392684
G Bcl10 BCL10, immune signaling adaptor JBrowse link 2 251,805,392 251,814,957 RGD:8554872
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:8554872
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:8554872
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 10 73,507,009 73,632,742 RGD:11252105
RGD:11252117
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase JBrowse link 3 120,373,604 120,404,910 RGD:1600539
RGD:13592920
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 3 110,367,949 110,420,471 RGD:13592920
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:13210582
RGD:13210584
G Chek2 checkpoint kinase 2 JBrowse link 12 51,845,574 51,878,098 RGD:2289706
RGD:8554872
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:2289840
RGD:13592920
RGD:8554872
G Ctnnbl1 catenin, beta like 1 JBrowse link 3 154,212,245 154,373,170 RGD:9850254
G Ctps2 CTP synthase 2 JBrowse link X 33,383,087 33,522,852 RGD:5132879
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:14700897
G Dcc DCC netrin 1 receptor JBrowse link 18 66,518,213 67,629,801 RGD:8554872
RGD:13592920
G Dlc1 DLC1 Rho GTPase activating protein JBrowse link 16 58,776,489 59,247,752 RGD:13592920
G Dpyd dihydropyrimidine dehydrogenase JBrowse link 2 221,823,692 222,694,627 RGD:11251746
G Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 JBrowse link 17 26,785,017 26,795,723 RGD:10401218
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:5131455
RGD:5131632
RGD:5131871
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:13592920
G Erbb4 erb-b2 receptor tyrosine kinase 4 JBrowse link 9 75,021,790 76,178,936 RGD:2289977
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:7364791
G F7 coagulation factor VII JBrowse link 16 81,824,610 81,834,923 RGD:11049532
G Fgfr3 fibroblast growth factor receptor 3 JBrowse link 14 82,272,322 82,287,739 RGD:13592920
RGD:8554872
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:13592920
RGD:8554872
G Galnt12 polypeptide N-acetylgalactosaminyltransferase 12 JBrowse link 5 62,718,733 62,751,345 RGD:8554872
RGD:13592920
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:11049536
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:11353274
RGD:14700961
RGD:14700958
RGD:14700954
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:11353274
RGD:14700995
RGD:14700986
RGD:14700954
G Hdac1 histone deacetylase 1 JBrowse link 5 147,716,664 147,743,723 RGD:9590193
G Hdac3 histone deacetylase 3 JBrowse link 18 31,073,057 31,094,347 RGD:9590193
G Hdac5 histone deacetylase 5 JBrowse link 10 90,140,183 90,169,853 RGD:9590193
G Hdac7 histone deacetylase 7 JBrowse link 7 139,280,396 139,319,108 RGD:9590193
G Hfe homeostatic iron regulator JBrowse link 17 43,661,276 43,669,327 RGD:8694350
G Hk1 hexokinase 1 JBrowse link 20 31,911,460 31,979,780 RGD:11353883
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 17 6,664,730 6,676,753 RGD:9999439
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 13 96,222,093 96,238,845 RGD:9999439
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:6480104
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:14975287
G Kdm3b lysine demethylase 3B JBrowse link 18 27,593,823 27,631,129 RGD:9586735
G Kdm4b lysine demethylase 4B JBrowse link 9 10,656,035 10,734,127 RGD:9587755
G Kif18a kinesin family member 18A JBrowse link 3 100,366,168 100,426,867 RGD:11554203
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:14398748
G L1cam L1 cell adhesion molecule JBrowse link X 156,901,244 156,928,064 RGD:6483011
G Lig4 DNA ligase 4 JBrowse link 16 85,331,771 85,339,496 RGD:8694072
G Mapk9 mitogen-activated protein kinase 9 JBrowse link 10 35,333,859 35,374,364 RGD:13217416
G Mir200c microRNA 200c JBrowse link 4 157,236,786 157,236,854 RGD:13217416
G Mir224 microRNA 224 JBrowse link X 152,223,754 152,223,835 RGD:14398749
G Mir30b microRNA 30b JBrowse link 7 109,282,662 109,282,747 RGD:13432037
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:1625107
G Mlh3 mutL homolog 3 JBrowse link 6 109,059,386 109,095,876 RGD:8554872
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:2293519
RGD:8554872
G Msh6 mutS homolog 6 JBrowse link 6 11,644,565 11,662,389 RGD:8554872
G Mutyh mutY DNA glycosylase JBrowse link 5 135,663,328 135,675,348 RGD:8554872
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:10412740
RGD:8554872
G Nras NRAS proto-oncogene, GTPase JBrowse link 2 205,553,119 205,563,716 RGD:8554872
RGD:13592920
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:8554872
RGD:13592920
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta JBrowse link 5 166,602,053 166,628,028 RGD:13432038
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 2 31,742,326 31,826,882 RGD:13432046
G Pold1 DNA polymerase delta 1, catalytic subunit JBrowse link 1 100,538,066 100,554,105 RGD:8554872
RGD:13592920
G Pole DNA polymerase epsilon, catalytic subunit JBrowse link 12 52,403,533 52,452,075 RGD:8554872
RGD:13592920
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:8554872
G Ptpn12 protein tyrosine phosphatase, non-receptor type 12 JBrowse link 4 10,631,129 10,702,390 RGD:8554872
G Ptprj protein tyrosine phosphatase, receptor type, J JBrowse link 3 79,233,519 79,390,956 RGD:8554872
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:13432050
RGD:13432052
G Rad54b RAD54 homolog B JBrowse link 5 25,140,531 25,214,469 RGD:8554872
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:13432052
G RT1-Bb RT1 class II, locus Bb JBrowse link 20 4,043,726 4,049,367 RGD:14974237
G Sema4a semaphorin 4A JBrowse link 2 187,799,568 187,823,014 RGD:8554872
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:14695524
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:8554872
G Smad7 SMAD family member 7 JBrowse link 18 71,395,830 71,424,164 RGD:13592920
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:13592920
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:13592920
G Tcf3 transcription factor 3 JBrowse link 7 12,146,642 12,168,400 RGD:13432058
RGD:13432063
RGD:13432062
RGD:13432061
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:13450926
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:13432086
RGD:13432088
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:13432081
RGD:13432086
G Tgfb3 transforming growth factor, beta 3 JBrowse link 6 109,913,757 109,936,217 RGD:13432088
G Tnfsf9 TNF superfamily member 9 JBrowse link 9 9,909,942 9,912,276 RGD:2317353
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:13592920
RGD:14995500
RGD:14995499
RGD:14995486
RGD:14995449
RGD:8554872
G Trpv3 transient receptor potential cation channel, subfamily V, member 3 JBrowse link 10 59,829,755 59,863,780 RGD:7183081
G Txnip thioredoxin interacting protein JBrowse link 2 198,683,168 198,686,971 RGD:1642760
G Xpo5 exportin 5 JBrowse link 9 17,125,201 17,163,170 RGD:11041733
G Xrcc2 X-ray repair cross complementing 2 JBrowse link 4 5,842,013 5,860,516 RGD:8554872
COLORECTAL CANCER 10 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pold1 DNA polymerase delta 1, catalytic subunit JBrowse link 1 100,538,066 100,554,105 RGD:8554872
RGD:7240710
colorectal carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actr2 actin related protein 2 JBrowse link 14 104,338,486 104,375,840 RGD:11570560
G Actr3 actin related protein 3 JBrowse link 13 41,695,520 41,738,622 RGD:11570560
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:7245559
G Akap12 A-kinase anchoring protein 12 JBrowse link 1 40,816,130 40,906,582 RGD:14348959
G Antxr1 ANTXR cell adhesion molecule 1 JBrowse link 4 118,946,267 119,131,202 RGD:9684940
G Bmi1 BMI1 proto-oncogene, polycomb ring finger JBrowse link 17 85,360,439 85,370,283 RGD:1580058
G Brd7 bromodomain containing 7 JBrowse link 19 19,672,780 19,701,484 RGD:9586444
G Calu calumenin JBrowse link 4 56,625,611 56,653,112 RGD:2316232
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:9587355
G Cd59 CD59 molecule JBrowse link 3 94,010,481 94,028,660 RGD:1600485
G Chi3l1 chitinase 3 like 1 JBrowse link 13 51,022,844 51,030,797 RGD:4892637
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:11564625
RGD:14700936
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:14700936
G Hnrnpm heterogeneous nuclear ribonucleoprotein M JBrowse link 7 18,516,253 18,554,536 RGD:10054273
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:5112894
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase JBrowse link 4 147,744,673 147,756,462 RGD:9588975
G Msh3 mutS homolog 3 JBrowse link 2 21,790,048 21,931,791 RGD:1625103
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:14402406
G Psmb9 proteasome 20S subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:6483362
G Strap serine/threonine kinase receptor associated protein JBrowse link 4 171,730,629 171,744,877 RGD:1581429
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:14995498
Colorectal Neoplasms term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca1 ATP binding cassette subfamily A member 1 JBrowse link 5 69,857,717 69,983,042 RGD:11554173
G Abca12 ATP binding cassette subfamily A member 12 JBrowse link 9 78,521,477 78,693,421 RGD:11554173
G Abca13 ATP binding cassette subfamily A member 13 JBrowse link 14 89,384,512 89,876,748 RGD:11554173
G Abca3 ATP binding cassette subfamily A member 3 JBrowse link 10 13,723,365 13,780,558 RGD:11554173
G Abca4 ATP binding cassette subfamily A member 4 JBrowse link 2 225,645,539 225,783,288 RGD:11554173
G Abca5 ATP binding cassette subfamily A member 5 JBrowse link 10 98,573,226 98,645,028 RGD:11554173
G Abca6 ATP binding cassette subfamily A member 6 JBrowse link 10 98,477,716 98,546,699 RGD:11554173
G Abca8 ATP binding cassette subfamily A member 8 JBrowse link 10 98,236,919 98,308,288 RGD:11554173
G Abca9 ATP binding cassette subfamily A member 9 JBrowse link 10 98,412,263 98,472,258 RGD:11554173
G Abcb10 ATP binding cassette subfamily B member 10 JBrowse link 19 56,742,809 56,772,904 RGD:11554173
G Abcb11 ATP binding cassette subfamily B member 11 JBrowse link 3 55,480,024 55,587,946 RGD:11554173
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:11554173
G Abcb4 ATP binding cassette subfamily B member 4 JBrowse link 4 22,133,984 22,192,687 RGD:11554173
G Abcb5 ATP binding cassette subfamily B member 5 JBrowse link 6 146,805,481 146,902,339 RGD:11554173
G Abcb6 ATP binding cassette subfamily B member 6 JBrowse link 9 82,373,950 82,382,228 RGD:11554173
G Abcc1 ATP binding cassette subfamily C member 1 JBrowse link 10 549,537 672,235 RGD:11554173
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:11554173
G Abcc3 ATP binding cassette subfamily C member 3 JBrowse link 10 82,047,308 82,116,928 RGD:11554173
G Abcc4 ATP binding cassette subfamily C member 4 JBrowse link 15 103,695,415 103,927,980 RGD:11554173
G Abcc5 ATP binding cassette subfamily C member 5 JBrowse link 11 84,395,982 84,490,215 RGD:11554173
G Abcc6 ATP binding cassette subfamily C member 6 JBrowse link 1 101,954,786 102,013,252 RGD:11554173
G Abcc8 ATP binding cassette subfamily C member 8 JBrowse link 1 102,110,708 102,191,287 RGD:11554173
G Abcd2 ATP binding cassette subfamily D member 2 JBrowse link 7 132,294,564 132,343,169 RGD:11554173
G Abcd3 ATP binding cassette subfamily D member 3 JBrowse link 2 225,335,708 225,389,120 RGD:11554173
G Abcd4 ATP binding cassette subfamily D member 4 JBrowse link 6 108,315,026 108,329,550 RGD:11554173
G Abce1 ATP binding cassette subfamily E member 1 JBrowse link 19 31,867,960 31,892,863 RGD:11041887
RGD:11554173
G Abcg1 ATP binding cassette subfamily G member 1 JBrowse link 20 9,743,269 9,842,735 RGD:11554173
G Abcg2 ATP binding cassette subfamily G member 2 JBrowse link 4 88,765,441 88,890,268 RGD:11554173
G Ackr3 atypical chemokine receptor 3 JBrowse link 9 97,355,881 97,367,455 RGD:11554173
G Akap9 A-kinase anchoring protein 9 JBrowse link 4 27,195,346 27,331,582 RGD:8554872
G Akr1b10 aldo-keto reductase family 1 member B10 JBrowse link 4 61,813,265 61,830,371 RGD:11554173
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:2313763
RGD:8554872
RGD:7240710
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:8554872
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:11035272
G Aldh2 aldehyde dehydrogenase 2 family member JBrowse link 12 40,466,418 40,498,813 RGD:11554173
G Amacr alpha-methylacyl-CoA racemase JBrowse link 2 60,949,276 60,961,342 RGD:11554173
G Anp32a acidic nuclear phosphoprotein 32 family member A JBrowse link 8 67,295,578 67,333,075 RGD:11554173
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:2293188
RGD:8554872
RGD:11554173
RGD:7240710
RGD:1331525
G Apc2 APC regulator of WNT signaling pathway 2 JBrowse link 7 12,258,468 12,280,459 RGD:11554173
G Arid1a AT-rich interaction domain 1A JBrowse link 5 151,904,687 151,977,973 RGD:11554173
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link 2 196,594,178 196,651,486 RGD:11554173
G Atp7b ATPase copper transporting beta JBrowse link 16 74,865,516 74,944,935 RGD:11554173
G Aurka aurora kinase A JBrowse link 3 170,364,177 170,380,278 RGD:7240710
RGD:11554173
G Axin1 axin 1 RGD:2293188
G Axin2 axin 2 JBrowse link 10 97,212,483 97,238,824 RGD:2293188
RGD:7240710
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:8554872
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:7240710
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:11554173
G Birc5 baculoviral IAP repeat-containing 5 JBrowse link 10 106,856,097 106,864,419 RGD:11554173
G Bmp2 bone morphogenetic protein 2 JBrowse link 3 126,335,963 126,346,771 RGD:11554173
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:11554173
G Boc BOC cell adhesion associated, oncogene regulated JBrowse link 11 61,084,216 61,159,220 RGD:11554173
G Boll boule homolog, RNA binding protein JBrowse link 9 61,836,517 61,975,640 RGD:11554173
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:2298531
RGD:8554872
RGD:11554173
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase JBrowse link 3 120,373,604 120,404,910 RGD:8554872
RGD:7240710
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 3 110,367,949 110,420,471 RGD:7240710
G Cables1 Cdk5 and Abl enzyme substrate 1 JBrowse link 18 3,317,724 3,421,721 RGD:11554173
G Cabyr calcium binding tyrosine phosphorylation regulated JBrowse link 18 4,082,175 4,096,650 RGD:11554173
G Cacul1 CDK2-associated, cullin domain 1 JBrowse link 1 281,814,226 281,874,675 RGD:11554173
G Calcoco2 calcium binding and coiled-coil domain 2 JBrowse link 10 83,935,087 83,963,750 RGD:11554173
G Calr calreticulin JBrowse link 19 25,956,771 25,961,666 RGD:11554173
G Casp8 caspase 8 JBrowse link 9 65,614,142 65,662,624 RGD:11554173
G Cbx5 chromobox 5 JBrowse link 7 144,819,673 144,865,014 RGD:11554173
G Ccl20 C-C motif chemokine ligand 20 JBrowse link 9 88,918,359 88,921,017 RGD:7483600
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:7240710
RGD:8554872
G Ccnd2 cyclin D2 JBrowse link 4 159,674,885 159,697,207 RGD:11554173
G Cd109 CD109 molecule JBrowse link 8 85,951,420 86,065,411 RGD:11554173
G Cd226 CD226 molecule JBrowse link 18 86,299,392 86,394,772 RGD:11554173
G Cd9 CD9 molecule JBrowse link 4 157,977,163 158,010,091 RGD:11554173
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:11554173
G Cdh22 cadherin 22 JBrowse link 3 161,574,993 161,971,102 RGD:11554173
G Cdh5 cadherin 5 JBrowse link 19 1,025,122 1,074,333 RGD:11554173
G Cdh7 cadherin 7 JBrowse link 13 31,081,064 31,228,884 RGD:11554173
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:8554872
G Cftr CF transmembrane conductance regulator JBrowse link 4 42,693,263 42,860,679 RGD:11554173
G Chd1 chromodomain helicase DNA binding protein 1 JBrowse link 1 57,692,828 57,756,762 RGD:11554173
G Chd5 chromodomain helicase DNA binding protein 5 JBrowse link 5 169,519,212 169,572,059 RGD:11554173
G Chek2 checkpoint kinase 2 JBrowse link 12 51,845,574 51,878,098 RGD:11554173
RGD:8554872
G Cnppd1 cyclin Pas1/PHO80 domain containing 1 JBrowse link 9 82,338,865 82,345,262 RGD:11554173
G Col7a1 collagen type VII alpha 1 chain JBrowse link 8 117,694,441 117,726,844 RGD:11554173
G Crebbp CREB binding protein JBrowse link 10 11,590,994 11,721,039 RGD:8554872
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:11554173
G Ctbp1 C-terminal binding protein 1 JBrowse link 14 82,762,109 82,789,350 RGD:11554173
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:2293188
RGD:8554872
RGD:11554173
RGD:7240710
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:11554173
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 JBrowse link 6 2,308,179 2,316,739 RGD:11554173
G Dact1 dishevelled-binding antagonist of beta-catenin 1 JBrowse link 6 93,740,440 93,751,003 RGD:11554173
G Dcc DCC netrin 1 receptor JBrowse link 18 66,518,213 67,629,801 RGD:7240710
RGD:11554173
G Dclk1 doublecortin-like kinase 1 JBrowse link 2 144,646,255 144,939,389 RGD:11554173
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:11554173
G Dlc1 DLC1 Rho GTPase activating protein JBrowse link 16 58,776,489 59,247,752 RGD:7240710
G Dnmt1 DNA methyltransferase 1 JBrowse link 8 21,922,515 21,968,495 RGD:9588299
G Dnmt3b DNA methyltransferase 3 beta JBrowse link 3 149,131,541 149,170,061 RGD:9589079
RGD:9589147
G Donson downstream neighbor of SON JBrowse link 11 31,834,608 31,847,751 RGD:11554173
G Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 JBrowse link 8 48,657,779 48,664,531 RGD:11554173
G Dpyd dihydropyrimidine dehydrogenase JBrowse link 2 221,823,692 222,694,627 RGD:11554173
G Efemp1 EGF containing fibulin extracellular matrix protein 1 JBrowse link 14 113,202,382 113,294,993 RGD:11554173
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:11554173
RGD:8554872
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link 20 4,576,033 4,592,980 RGD:9589147
G Eif3h eukaryotic translation initiation factor 3, subunit H JBrowse link 6 10,151,732 10,236,677 RGD:11554173
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:7240710
G Epha1 Eph receptor A1 JBrowse link 4 71,749,100 71,763,681 RGD:11554173
G Ephb2 Eph receptor B2 JBrowse link 5 155,024,478 155,143,539 RGD:8554872
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:8554872
G Erbb3 erb-b2 receptor tyrosine kinase 3 JBrowse link 7 2,989,202 3,010,610 RGD:8554872
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 80,256,973 80,268,198 RGD:13207315
RGD:13207423
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit JBrowse link 1 80,293,574 80,307,334 RGD:11554173
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:11554173
G Etv1 ETS variant transcription factor 1 JBrowse link 6 58,467,215 58,558,640 RGD:11554173
G Evl Enah/Vasp-like JBrowse link 6 132,470,283 132,590,242 RGD:11554173
G Exo1 exonuclease 1 JBrowse link 13 93,936,989 93,962,749 RGD:11554173
G Eya4 EYA transcriptional coactivator and phosphatase 4 JBrowse link 1 23,237,617 23,611,580 RGD:11554173
G F7 coagulation factor VII JBrowse link 16 81,824,610 81,834,923 RGD:11049522
G Fads1 fatty acid desaturase 1 JBrowse link 1 226,234,034 226,249,118 RGD:11554173
G Fads2 fatty acid desaturase 2 JBrowse link 1 225,906,582 226,152,568 RGD:11554173
G Fat1 FAT atypical cadherin 1 JBrowse link 16 50,372,150 50,501,716 RGD:11554173
G Fbln2 fibulin 2 JBrowse link 4 122,835,237 122,895,127 RGD:11554173
G Fbn2 fibrillin 2 JBrowse link 18 53,068,495 53,272,254 RGD:11554173
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:8554872
G Fen1 flap structure-specific endonuclease 1 JBrowse link 1 226,251,516 226,256,160 RGD:11554173
G Fgfr3 fibroblast growth factor receptor 3 JBrowse link 14 82,272,322 82,287,739 RGD:7240710
G Fhl3 four and a half LIM domains 3 JBrowse link 5 142,688,962 142,696,330 RGD:11554173
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:7240710
G Flnc filamin C JBrowse link 4 56,710,934 56,738,779 RGD:11554173
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:13210756
RGD:13210758
G Foxl2 forkhead box L2 JBrowse link 8 107,194,492 107,197,644 RGD:11554173
G Fpgs folylpolyglutamate synthase JBrowse link 3 11,717,667 11,729,694 RGD:11554173
G Galnt12 polypeptide N-acetylgalactosaminyltransferase 12 JBrowse link 5 62,718,733 62,751,345 RGD:8554872
RGD:11554173
RGD:7240710
G Gapdh glyceraldehyde-3-phosphate dehydrogenase JBrowse link 4 157,676,336 157,680,322 RGD:11554173
G Gata4 GATA binding protein 4 JBrowse link 15 46,386,703 46,458,679 RGD:11554173
G Gata5 GATA binding protein 5 JBrowse link 3 175,701,278 175,709,465 RGD:11554173
G Ggh gamma-glutamyl hydrolase JBrowse link 5 34,040,258 34,063,369 RGD:11554173
G Gnas GNAS complex locus JBrowse link 3 172,374,957 172,434,988 RGD:8554872
G Gnb4 G protein subunit beta 4 JBrowse link 2 118,978,965 119,007,877 RGD:11554173
G Gnb5 G protein subunit beta 5 JBrowse link 8 82,248,951 82,286,493 RGD:11554173
G Gpnmb glycoprotein nmb JBrowse link 4 78,694,447 78,715,685 RGD:11554173
G Gpx4 glutathione peroxidase 4 JBrowse link 7 12,516,357 12,519,154 RGD:11554173
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 3 105,203,309 105,214,989 RGD:11554173
G Grid1 glutamate ionotropic receptor delta type subunit 1 JBrowse link 16 11,170,831 11,932,197 RGD:11554173
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:11554173
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:11554173
RGD:12798518
RGD:12798517
G Gstm3 glutathione S-transferase mu 3 JBrowse link 2 210,685,204 210,688,273 RGD:11554173
G Gstm5 glutathione S-transferase, mu 5 JBrowse link 2 210,685,338 210,688,133 RGD:11554173
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:8554872
G Gucy1a2 guanylate cyclase 1 soluble subunit alpha 2 JBrowse link 8 408,001 899,851 RGD:11554173
G Gucy2c guanylate cyclase 2C JBrowse link 4 170,659,993 170,740,274 RGD:11554173
G Hapln1 hyaluronan and proteoglycan link protein 1 JBrowse link 2 18,354,542 18,419,077 RGD:11554173
G Hhip Hedgehog-interacting protein JBrowse link 19 31,525,134 31,614,487 RGD:11554173
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 7 144,865,302 144,871,592 RGD:9999439
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 JBrowse link 10 35,872,619 35,879,911 RGD:9999439
G Hoxd1 homeo box D1 JBrowse link 3 61,685,619 61,687,758 RGD:11554173
G Hoxd9 homeo box D9 JBrowse link 3 61,620,192 61,622,360 RGD:11554173
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:8554872
G Icam5 intercellular adhesion molecule 5 JBrowse link 8 22,050,222 22,057,209 RGD:11554173
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 JBrowse link 9 71,882,108 71,911,645 RGD:8554872
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 JBrowse link 1 141,874,354 141,893,674 RGD:8554872
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:11554173
G Igfbp3 insulin-like growth factor binding protein 3 JBrowse link 14 87,457,647 87,465,374 RGD:11554173
G Il6st interleukin 6 signal transducer JBrowse link 2 44,279,199 44,319,427 RGD:11554173
G Ing4 inhibitor of growth family, member 4 JBrowse link 4 157,554,729 157,563,353 RGD:11554173
G Ipp intracisternal A particle-promoted polypeptide JBrowse link 5 135,351,767 135,390,363 RGD:11554173
G Jph3 junctophilin 3 JBrowse link 19 54,553,419 54,613,477 RGD:11554173
G Kdm2a lysine demethylase 2A JBrowse link 1 219,566,130 219,642,294 RGD:11554173
G Kdm4b lysine demethylase 4B JBrowse link 9 10,656,035 10,734,127 RGD:9586735
G Kdm5b lysine demethylase 5B JBrowse link 13 51,384,371 51,455,392 RGD:9587777
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:11554173
G Klf2 Kruppel-like factor 2 JBrowse link 16 19,223,087 19,225,037 RGD:11554173
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:11554173
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:11060146
RGD:8554872
RGD:11568690
RGD:11554173
G Lama1 laminin subunit alpha 1 JBrowse link 9 115,916,907 116,042,123 RGD:11554173
G Lgr5 leucine rich repeat containing G protein coupled receptor 5 JBrowse link 7 58,447,097 58,587,787 RGD:11554173
G Lgr6 leucine-rich repeat-containing G protein-coupled receptor 6 JBrowse link 13 51,811,904 51,931,193 RGD:11554173
G Lpar1 lysophosphatidic acid receptor 1 JBrowse link 5 75,557,038 75,678,067 RGD:11554173
G Lrrc3b leucine rich repeat containing 3B JBrowse link 15 11,221,161 11,299,563 RGD:11554173
G Lrrc56 leucine rich repeat containing 56 JBrowse link 1 214,182,232 214,197,184 RGD:8554872
G Ly96 lymphocyte antigen 96 JBrowse link 5 1,972,212 1,989,448 RGD:11554173
G Maf MAF bZIP transcription factor JBrowse link 19 48,179,826 48,200,995 RGD:11554173
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:8554872
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:13210794
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:13210794
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase JBrowse link 4 147,744,673 147,756,462 RGD:2316846
RGD:9588979
G Mcc MCC regulator of WNT signaling pathway JBrowse link 18
1
35,683,185
12,006,663
35,817,117
12,128,849
RGD:7240710
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:2317534
G Mir106b microRNA 106b JBrowse link 12 19,307,752 19,307,833 RGD:11554173
G Mir130b microRNA 130b JBrowse link 11 88,129,773 88,129,854 RGD:11554173
G Mir26b microRNA 26b JBrowse link 9 81,675,275 81,675,359 RGD:11554173
G Mir93 microRNA 93 JBrowse link 12 19,307,543 19,307,629 RGD:11554173
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:11554173
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:2306714
RGD:11554173
G Mlh3 mutL homolog 3 JBrowse link 6 109,059,386 109,095,876 RGD:7240710
RGD:11554173
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:7207022
RGD:11554173
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:8657112
RGD:11554173
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:7207065
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:8657112
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:2306714
RGD:11554173
G Msh6 mutS homolog 6 JBrowse link 6 11,644,565 11,662,389 RGD:2306714
G Mtdh metadherin JBrowse link 7 72,771,018 72,830,599 RGD:11554173
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:11554173
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:8554872
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:11554173
G Mug2 murinoglobulin 2 JBrowse link 4 154,215,262 154,282,608 RGD:11554173
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:11554173
G Nampt nicotinamide phosphoribosyltransferase JBrowse link 6 52,122,085 52,156,473 RGD:11554173
G Nap1l1 nucleosome assembly protein 1-like 1 JBrowse link 7 54,213,305 54,237,880 RGD:9590076
G Neurl1 neuralized E3 ubiquitin protein ligase 1 JBrowse link 1 266,953,006 267,038,879 RGD:11554173
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 JBrowse link 10 81,657,152 81,666,542 RGD:11554173
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 JBrowse link 10 81,648,216 81,653,717 RGD:11554173
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:11554173
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:11554173
G Nras NRAS proto-oncogene, GTPase JBrowse link 2 205,553,119 205,563,716 RGD:7240710
RGD:8554872
G Nrcam neuronal cell adhesion molecule JBrowse link 6 64,297,843 64,867,408 RGD:11554173
G Nt5c 5', 3'-nucleotidase, cytosolic JBrowse link 10 104,052,807 104,054,805 RGD:11554173
G Ntng1 netrin G1 JBrowse link 2 212,695,464 213,073,046 RGD:11554173
G Nusap1 nucleolar and spindle associated protein 1 JBrowse link 3 111,422,267 111,452,600 RGD:11554173
G Nxn nucleoredoxin JBrowse link 10 64,411,710 64,550,147 RGD:11554173
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:7240710
RGD:11554173
G Paip2 poly(A) binding protein interacting protein 2 JBrowse link 18 28,397,320 28,415,911 RGD:11554173
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:11554173
G Pax8 paired box 8 JBrowse link 3 1,527,316 1,586,019 RGD:11554173
G Pdcd1 programmed cell death 1 JBrowse link 9 101,305,742 101,319,937 RGD:9589083
G Pdgfrl platelet-derived growth factor receptor-like JBrowse link 16 54,386,269 54,450,426 RGD:7240710
G Pecam1 platelet and endothelial cell adhesion molecule 1 JBrowse link 10 94,850,971 94,913,202 RGD:6771214
G Pgm1 phosphoglucomutase 1 JBrowse link 5 118,743,632 118,803,055 RGD:11554173
G Pheta1 PH domain containing endocytic trafficking adaptor 1 JBrowse link 12 40,225,316 40,230,573 RGD:11554173
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:7240710
RGD:8554872
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma JBrowse link 6 51,465,696 51,501,234 RGD:6482694
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 2 31,742,326 31,826,882 RGD:8554872
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 JBrowse link 5 135,069,972 135,145,633 RGD:13432046
G Pla2g2a phospholipase A2 group IIA JBrowse link 5 157,282,650 157,285,295 RGD:619597
RGD:7240710
G Pmm2 phosphomannomutase 2 JBrowse link 10 7,056,258 7,077,443 RGD:11554173
G Pms1 PMS1 homolog 1, mismatch repair system component JBrowse link 9 53,120,656 53,206,520 RGD:2306714
G Pms2 PMS1 homolog 2, mismatch repair system component JBrowse link 12 12,714,394 12,738,654 RGD:2306714
G Pold1 DNA polymerase delta 1, catalytic subunit JBrowse link 1 100,538,066 100,554,105 RGD:11554173
G Pold3 DNA polymerase delta 3, accessory subunit JBrowse link 1 165,085,142 165,122,385 RGD:11554173
G Pole DNA polymerase epsilon, catalytic subunit JBrowse link 12 52,403,533 52,452,075 RGD:8554872
RGD:7240710
RGD:11554173
G Postn periostin JBrowse link 2 143,656,820 143,688,087 RGD:11554173
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:11554173
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent, 1E JBrowse link 10 74,548,270 74,679,858 RGD:11554173
G Ppox protoporphyrinogen oxidase JBrowse link 13 89,650,094 89,654,998 RGD:11554173
G Ppp1r14a protein phosphatase 1, regulatory (inhibitor) subunit 14A JBrowse link 1 87,224,683 87,232,842 RGD:11554173
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B JBrowse link 10 82,800,704 82,816,735 RGD:9999401
G Ppp2r1a protein phosphatase 2 scaffold subunit A alpha JBrowse link 1 60,717,386 60,736,629 RGD:8554872
G Prkcb protein kinase C, beta JBrowse link 1 192,233,569 192,575,339 RGD:11554173
G Prkce protein kinase C, epsilon JBrowse link 6 9,483,400 9,973,396 RGD:11554173
G Prkd1 protein kinase D1 JBrowse link 6 71,035,017 71,349,531 RGD:11554173
G Prom1 prominin 1 JBrowse link 14 71,532,321 71,637,400 RGD:11554173
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:8554872
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:11554173
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 JBrowse link 12 40,895,515 40,955,999 RGD:8554872
G Ptpn12 protein tyrosine phosphatase, non-receptor type 12 JBrowse link 4 10,631,129 10,702,390 RGD:7240710
G Ptprd protein tyrosine phosphatase, receptor type, D JBrowse link 5 92,862,229 93,514,071 RGD:11554173
G Ptprj protein tyrosine phosphatase, receptor type, J JBrowse link 3 79,233,519 79,390,956 RGD:7240710
G Pycard PYD and CARD domain containing JBrowse link 1 199,438,029 199,439,062 RGD:11554173
G Rad54b RAD54 homolog B JBrowse link 5 25,140,531 25,214,469 RGD:7240710
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 4 147,532,040 147,592,769 RGD:8554872
G Rasl11a RAS-like family 11 member A JBrowse link 12 9,986,150 9,990,284 RGD:11554173
G Ret ret proto-oncogene JBrowse link 4 150,202,170 150,249,196 RGD:11554173
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:8554872
G Rhpn2 rhophilin, Rho GTPase binding protein 2 JBrowse link 1 91,596,344 91,657,395 RGD:11554173
G Rnf182 ring finger protein 182 JBrowse link 17 24,242,640 24,292,975 RGD:11554173
G Rnf43 ring finger protein 43 JBrowse link 10 74,956,411 75,028,951 RGD:11554173
G Rrm2 ribonucleotide reductase regulatory subunit M2 JBrowse link 6 43,884,627 43,890,818 RGD:11554173
G Runx3 RUNX family transcription factor 3 JBrowse link 5 153,507,093 153,531,137 RGD:2302552
G Satb2 SATB homeobox 2 JBrowse link 9 63,456,877 63,642,193 RGD:11554173
G Scg5 secretogranin V JBrowse link 3 105,235,065 105,279,475 RGD:11554173
G Selenbp1 selenium binding protein 1 JBrowse link 2 196,105,592 196,146,474 RGD:11554173
G Selenop selenoprotein P JBrowse link 2 53,105,912 53,116,198 RGD:11554173
G Serpinb5 serpin family B member 5 JBrowse link 13 26,903,052 26,923,250 RGD:11554173
G Sesn2 sestrin 2 JBrowse link 5 150,684,891 150,703,846 RGD:11554173
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 16 73,372,007 73,410,777 RGD:11554173
G Sfrp2 secreted frizzled-related protein 2 JBrowse link 2 182,723,732 182,731,277 RGD:11554173
G Sfrp4 secreted frizzled-related protein 4 JBrowse link 17 47,383,983 47,394,065 RGD:11554173
G Sfrp5 secreted frizzled-related protein 5 JBrowse link 1 261,442,108 261,446,570 RGD:11554173
G Sfxn1 sideroflexin 1 JBrowse link 17 11,046,588 11,082,219 RGD:11554173
G Sh3tc1 SH3 domain and tetratricopeptide repeats 1 JBrowse link 14 80,184,814 80,229,207 RGD:11554173
G Slc19a1 solute carrier family 19 member 1 JBrowse link 20 12,334,675 12,354,517 RGD:11554173
G Slc22a15 solute carrier family 22, member 15 JBrowse link 2 204,281,638 204,344,026 RGD:11554173
G Slco1b2 solute carrier organic anion transporter family, member 1B2 JBrowse link 4 175,814,118 175,881,775 RGD:11554173
G Slco2a1 solute carrier organic anion transporter family, member 2a1 JBrowse link 8 111,495,443 111,577,320 RGD:11554173
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:11554173
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:8554872
RGD:11554173
G Smad7 SMAD family member 7 JBrowse link 18 71,395,830 71,424,164 RGD:8554872
RGD:7240710
RGD:11554173
G Smad9 SMAD family member 9 JBrowse link 2 143,951,725 144,002,025 RGD:11554173
G Snrpf small nuclear ribonucleoprotein polypeptide F JBrowse link 7 34,478,331 34,485,034 RGD:10768838
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:1581258
RGD:11554173
G Sox17 SRY-box transcription factor 17 JBrowse link 5 14,890,318 14,895,907 RGD:11554173
G Sparc secreted protein acidic and cysteine rich JBrowse link 10 40,742,390 40,764,232 RGD:11554173
G Spint1 serine peptidase inhibitor, Kunitz type 1 JBrowse link 3 111,049,132 111,061,991 RGD:1581311
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:7240710
G Stard8 StAR-related lipid transfer domain containing 8 JBrowse link X 68,713,157 68,785,046 RGD:11554173
G Strap serine/threonine kinase receptor associated protein JBrowse link 4 171,730,629 171,744,877 RGD:11554173
G Sult1a1 sulfotransferase family 1A member 1 JBrowse link 1 198,100,586 198,104,106 RGD:1581449
G Sult2b1 sulfotransferase family 2B member 1 JBrowse link 1 101,712,254 101,774,683 RGD:11554173
G Syne1 spectrin repeat containing nuclear envelope protein 1 JBrowse link 1
1
41,608,287
41,844,840
41,763,591
42,086,662
RGD:11554173
G Tcerg1l transcription elongation regulator 1-like JBrowse link 1 210,550,668 210,739,600 RGD:11554173
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:11554173
G Tcn2 transcobalamin 2 JBrowse link 14 84,173,992 84,189,299 RGD:11554173
G Tet2 tet methylcytosine dioxygenase 2 JBrowse link 2 238,719,389 238,802,975 RGD:11554173
G Tfpi2 tissue factor pathway inhibitor 2 JBrowse link 4 28,947,951 28,953,261 RGD:11554173
G Tfrc transferrin receptor JBrowse link 11 71,397,423 71,419,263 RGD:11554173
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:11554173
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:13432077
G Tgfbr1 transforming growth factor, beta receptor 1 JBrowse link 5 63,056,071 63,119,635 RGD:11554173
G Tk1 thymidine kinase 1 JBrowse link 10 106,817,556 106,828,888 RGD:11554173
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:7240710
RGD:11554173
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Tnfsf10 TNF superfamily member 10 JBrowse link 2 113,008,008 113,026,899 RGD:11554173
G Tnfsf13 TNF superfamily member 13 JBrowse link 10 56,286,964 56,290,680 RGD:11554173
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1331525
RGD:8554872
RGD:11554173
RGD:7240710
G Tp63 tumor protein p63 JBrowse link 11 78,234,853 78,456,559 RGD:11554173
G Trim28 tripartite motif-containing 28 JBrowse link 1 65,544,369 65,551,043 RGD:11554173
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 JBrowse link 3 119,258,189 119,347,084 RGD:11554173
G Txnrd1 thioredoxin reductase 1 JBrowse link 7 26,946,124 26,984,400 RGD:11554173
G Tymp thymidine phosphorylase JBrowse link 7 130,342,481 130,347,845 RGD:11554173
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:5133433
RGD:11554173
G Umps uridine monophosphate synthetase JBrowse link 11 70,034,181 70,044,590 RGD:11554173
G Ung uracil-DNA glycosylase JBrowse link 12 48,246,593 48,255,547 RGD:11554173
G Vti1a vesicle transport through interaction with t-SNAREs 1A JBrowse link 1 276,310,072 276,508,635 RGD:11554173
G Wif1 Wnt inhibitory factor 1 JBrowse link 7 63,094,955 63,165,158 RGD:11554173
G Xaf1 XIAP associated factor 1 JBrowse link 10 58,860,647 58,872,782 RGD:11554173
G Xpo1 exportin 1 JBrowse link 14 108,007,421 108,049,088 RGD:8554872
G Yap1 yes-associated protein 1 JBrowse link 8 6,133,014 6,204,240 RGD:11554173
G Zfp292 zinc finger protein 292 JBrowse link 5 50,282,084 50,362,344 RGD:11554173
G Zfp36l2 zinc finger protein 36, C3H type-like 2 JBrowse link 6 7,417,416 7,423,447 RGD:11554173
G Zfp74 zinc finger protein 74 JBrowse link 1 88,231,016 88,257,565 RGD:11554173
G Zkscan3 zinc finger with KRAB and SCAN domains 3 JBrowse link 17 45,247,724 45,263,422 RGD:11554173
G Zmiz1 zinc finger, MIZ-type containing 1 JBrowse link 16 1,749,191 1,954,633 RGD:11554173
common bile duct neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apob apolipoprotein B JBrowse link 6 33,176,826 33,216,381 RGD:2325763
G Fscn1 fascin actin-bundling protein 1 JBrowse link 12 13,655,459 13,668,595 RGD:2317789
G Msln mesothelin JBrowse link 10 15,119,700 15,129,129 RGD:2326064
G Mtap methylthioadenosine phosphorylase JBrowse link 5 107,711,077 107,777,530 RGD:2317954