IKBKG (inhibitor of nuclear factor kappa B kinase regulatory subunit gamma) - Rat Genome Database

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Gene: IKBKG (inhibitor of nuclear factor kappa B kinase regulatory subunit gamma) Pan paniscus
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Symbol: IKBKG
Name: inhibitor of nuclear factor kappa B kinase regulatory subunit gamma
RGD ID: 11864449
Description: ENCODES a protein that exhibits peroxisome proliferator activated receptor binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN anoikis (ortholog); B cell homeostasis (ortholog); negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN FasL mediated signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myocardial infarction (ortholog); adrenoleukodystrophy (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog); IkappaB kinase complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma; inhibitor of nuclear factor kappa B kinase subunit gamma; NF-kappa-B essential modulator
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X154,521,470 - 154,539,144 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X154,524,964 - 154,546,311 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X143,988,720 - 144,010,078 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X153,869,352 - 153,876,677 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX153,854,493 - 153,876,092 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
IKBKG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X154,521,470 - 154,539,144 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X154,524,964 - 154,546,311 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X143,988,720 - 144,010,078 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X153,869,352 - 153,876,677 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX153,854,493 - 153,876,092 (+)Ensemblpanpan1.1panPan2
IKBKG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X154,541,238 - 154,565,046 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX154,541,199 - 154,565,046 (+)EnsemblGRCh38hg38GRCh38
GRCh37X153,769,453 - 153,793,261 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X153,423,653 - 153,446,455 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X153,339,765 - 153,356,964NCBI
CeleraX153,931,508 - 153,953,200 (+)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX142,346,885 - 142,356,952 (+)NCBIHuRef
CHM1_1X153,682,228 - 153,705,030 (+)NCBICHM1_1
T2T-CHM13v2.0X152,777,621 - 152,801,428 (+)NCBIT2T-CHM13v2.0
Ikbkg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X73,436,883 - 73,498,013 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX73,436,896 - 73,497,460 (+)EnsemblGRCm39 Ensembl
GRCm38X74,393,233 - 74,456,792 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX74,393,290 - 74,453,854 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X71,638,630 - 71,699,117 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X70,682,424 - 70,704,240 (+)NCBIMGSCv36mm8
CeleraX65,647,484 - 65,706,592 (+)NCBICelera
Cytogenetic MapXA7.3NCBI
cM MapX38.0NCBI
Ikbkg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X157,358,279 - 157,397,563 (+)NCBIGRCr8
mRatBN7.2X152,216,485 - 152,241,476 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX152,216,596 - 152,239,499 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX154,366,048 - 154,379,411 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X157,928,859 - 157,942,222 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X155,601,075 - 155,614,438 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X156,254,187 - 156,280,046 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX156,257,173 - 156,270,748 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01151,994,689 - 152,019,874 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X160,386,558 - 160,420,190 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X160,483,372 - 160,496,394 (+)NCBI
Celera1135,659,513 - 135,672,876 (-)NCBICelera
Cytogenetic MapXq37NCBI
Ikbkg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555801,053,823 - 1,069,802 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555801,053,823 - 1,069,802 (+)NCBIChiLan1.0ChiLan1.0
IKBKG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X122,232,052 - 122,253,499 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX122,235,878 - 122,250,562 (+)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X125,373,537 - 125,395,176 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX125,373,743 - 125,395,172 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X121,142,500 - 121,164,137 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X123,657,571 - 123,679,200 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X123,419,351 - 123,440,993 (+)NCBIUU_Cfam_GSD_1.0
Ikbkg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X119,519,768 - 119,569,193 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049368091,257,654 - 1,301,813 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049368091,280,254 - 1,306,964 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IKBKG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX125,036,508 - 125,056,453 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X125,035,575 - 125,056,445 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X143,478,840 - 143,498,934 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IKBKG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X128,781,975 - 128,816,039 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX128,787,785 - 128,806,083 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606566,774,279 - 66,797,151 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ikbkg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624946996,814 - 1,013,379 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624946997,571 - 1,015,748 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000020891   ⟹   ENSPPAP00000004543
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX153,854,493 - 153,876,092 (+)Ensembl
RefSeq Acc Id: XM_008952821   ⟹   XP_008951069
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X154,521,524 - 154,539,144 (+)NCBI
NHGRI_mPanPan1X154,525,348 - 154,542,751 (+)NCBI
Mhudiblu_PPA_v0X143,989,234 - 144,006,530 (+)NCBI
PanPan1.1X153,869,352 - 153,876,677 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034950011   ⟹   XP_034805902
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X154,521,524 - 154,539,144 (+)NCBI
NHGRI_mPanPan1X154,525,211 - 154,542,751 (+)NCBI
Mhudiblu_PPA_v0X143,988,720 - 144,006,530 (+)NCBI
RefSeq Acc Id: XM_034950012   ⟹   XP_034805903
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X154,521,470 - 154,539,144 (+)NCBI
NHGRI_mPanPan1X154,525,211 - 154,542,751 (+)NCBI
Mhudiblu_PPA_v0X143,988,720 - 144,006,530 (+)NCBI
RefSeq Acc Id: XM_034950014   ⟹   XP_034805905
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X154,521,524 - 154,539,144 (+)NCBI
NHGRI_mPanPan1X154,525,198 - 154,542,751 (+)NCBI
Mhudiblu_PPA_v0X143,988,720 - 144,006,530 (+)NCBI
RefSeq Acc Id: XM_034950015   ⟹   XP_034805906
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X154,521,524 - 154,539,144 (+)NCBI
NHGRI_mPanPan1X154,525,195 - 154,542,751 (+)NCBI
Mhudiblu_PPA_v0X143,988,720 - 144,006,530 (+)NCBI
RefSeq Acc Id: XM_034950016   ⟹   XP_034805907
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X154,521,524 - 154,539,144 (+)NCBI
NHGRI_mPanPan1X154,525,196 - 154,542,751 (+)NCBI
Mhudiblu_PPA_v0X143,988,720 - 144,006,530 (+)NCBI
RefSeq Acc Id: XP_008951069   ⟸   XM_008952821
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZP21 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034805903   ⟸   XM_034950012
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZP21 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034805905   ⟸   XM_034950014
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034805902   ⟸   XM_034950011
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZP21 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034805906   ⟸   XM_034950015
- Peptide Label: isoform X4
RefSeq Acc Id: XP_034805907   ⟸   XM_034950016
- Peptide Label: isoform X5
Ensembl Acc Id: ENSPPAP00000004543   ⟸   ENSPPAT00000020891
Protein Domains
CCHC NOA-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000019041 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000020891.1 UniProtKB/TrEMBL
Gene3D-CATH L1 transposable element, trimerization domain UniProtKB/TrEMBL
  Nemo cc2-lz domain - 1d5 darpin complex UniProtKB/TrEMBL
InterPro CC2-LZ_dom UniProtKB/TrEMBL
  NEMO_ZF UniProtKB/TrEMBL
  Optineurin/NFkB_EssMod UniProtKB/TrEMBL
NCBI Gene IKBKG ENTREZGENE
PANTHER NF-KAPPA-B ESSENTIAL MODULATOR UniProtKB/TrEMBL
  NF-KAPPA-B ESSENTIAL MODULATOR UniProtKB/TrEMBL
Pfam CC2-LZ UniProtKB/TrEMBL
  zf_C2H2_10 UniProtKB/TrEMBL
PROSITE ZF_CCHC_NOA UniProtKB/TrEMBL
UniProt A0A2R8ZP21 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-02-19 IKBKG  inhibitor of nuclear factor kappa B kinase regulatory subunit gamma    inhibitor of nuclear factor kappa B kinase subunit gamma  Symbol and/or name change 5135510 APPROVED