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Gene: ARID1A (AT-rich interaction domain 1A) Pan paniscus

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Symbol:

ARID1A

Name:

AT-rich interaction domain 1A

RGD ID:

11761117

Description:

ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); nucleosome binding (ortholog); INVOLVED IN cardiac chamber development (ortholog); cardiac muscle cell differentiation (ortholog); chromatin organization (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; pancreatic cancer pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH Acute Hepatitis (ortholog); adenocarcinoma (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN npBAF complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

AT rich interactive domain 1A (SWI-like); AT-rich interactive domain-containing protein 1A; LOC100988406

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	200,085,631 - 200,171,818 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	199,189,927 - 199,276,131 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	25,960,868 - 26,047,057 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	27,019,596 - 27,103,239 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	27,018,616 - 27,103,239 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID1A	Bonobo	Acute Hepatitis	exacerbates	ISO	Arid1a (Mus musculus)	9068941		RGD	PMID:26569409 and REF_RGD_ID:11344640
ARID1A	Bonobo	breast cancer	treatment	ISO	ARID1A (Homo sapiens)	9068941	human cells in mouse model	RGD	PMID:26069190 and REF_RGD_ID:11072938
ARID1A	Bonobo	colon adenocarcinoma	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:colorectum (human)	RGD	PMID:26980037 and REF_RGD_ID:126790569
ARID1A	Bonobo	colon cancer	treatment	ISO	ARID1A (Homo sapiens)	9068941	human cells in mouse model	RGD	PMID:26069190 and REF_RGD_ID:11072938
ARID1A	Bonobo	colorectal cancer	exacerbates	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:colorectum (human)	RGD	PMID:31263894 and REF_RGD_ID:126777686
ARID1A	Bonobo	colorectal cancer	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:colorectum (human)	RGD	PMID:25561809 and REF_RGD_ID:126779574
ARID1A	Bonobo	colorectal carcinoma	onset	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:colorectum (human)	RGD	PMID:24925223 and REF_RGD_ID:126790632
ARID1A	Bonobo	endometrial adenocarcinoma	treatment	ISO	ARID1A (Homo sapiens)	9068941	human cell in mouse model	RGD	PMID:21900401 and REF_RGD_ID:126725086
ARID1A	Bonobo	endometrial cancer	onset	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:endometrium (human)	RGD	PMID:23887303 and REF_RGD_ID:126779522
ARID1A	Bonobo	esophagus adenocarcinoma	disease_progression	ISO	ARID1A (Homo sapiens)	9068941		RGD	PMID:31906887 and REF_RGD_ID:127285649
ARID1A	Bonobo	Experimental Liver Neoplasms	disease_progression	ISO	Arid1a (Mus musculus)	9068941		RGD	PMID:26569409 and REF_RGD_ID:11344640
ARID1A	Bonobo	gastric adenocarcinoma	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:stomach (human)	RGD	PMID:25717252 and REF_RGD_ID:126848753
ARID1A	Bonobo	gastric adenocarcinoma	exacerbates	ISO	ARID1A (Homo sapiens)	9068941	mRNA and protein:decreased expression:mucosa of stomach (human)	RGD	PMID:22808142 and REF_RGD_ID:125097488
ARID1A	Bonobo	gastric adenocarcinoma	severity	ISO	ARID1A (Homo sapiens)	9068941	mRNA:decreased expression:mucosa of stomach (human)	RGD	PMID:24293408 and REF_RGD_ID:125097521
ARID1A	Bonobo	hepatocellular carcinoma	exacerbates	ISO	Arid1a (Mus musculus)	9068941	associated with non-alcoholic steatohepatitis	RGD	PMID:26569409 and REF_RGD_ID:11344640
ARID1A	Bonobo	hepatocellular carcinoma		ISO	ARID1A (Homo sapiens)	9068941	mRNA and protein:decreased expression:liver (human)	RGD	PMID:25975202 and REF_RGD_ID:125097495
ARID1A	Bonobo	hepatocellular carcinoma		ISO	ARID1A (Homo sapiens)	9068941	mRNA and protein:increased expression:liver (human)	RGD	PMID:26589513 and REF_RGD_ID:125097485
ARID1A	Bonobo	hepatocellular carcinoma	treatment	ISO	Arid1a (Mus musculus)	9068941		RGD	PMID:29113912 and REF_RGD_ID:125097519
ARID1A	Bonobo	hepatocellular carcinoma	exacerbates	ISO	Arid1a (Mus musculus)	9068941		RGD	PMID:29136504 and REF_RGD_ID:126790634
ARID1A	Bonobo	hepatocellular carcinoma	exacerbates	ISO	ARID1A (Homo sapiens)	9068941	human gene in mouse model	RGD	PMID:29136504 and REF_RGD_ID:126790634
ARID1A	Bonobo	intrahepatic cholangiocarcinoma	exacerbates	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:intrahepatic bile duct (human)	RGD	PMID:31665232 and REF_RGD_ID:126781775
ARID1A	Bonobo	intrahepatic cholangiocarcinoma	disease_progression	ISO	ARID1A (Homo sapiens)	9068941		RGD	PMID:30849962 and REF_RGD_ID:14974231
ARID1A	Bonobo	intrahepatic cholangiocarcinoma	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	mRNA and protein:decreased expression:intrahepatic bile duct (human)	RGD	PMID:27433094 and REF_RGD_ID:126775257
ARID1A	Bonobo	Klatskin's tumor	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	DNA:deletions	RGD	PMID:33387086 and REF_RGD_ID:126848756
ARID1A	Bonobo	lung non-small cell carcinoma	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:lung (human)	RGD	PMID:24566899 and REF_RGD_ID:126848781
ARID1A	Bonobo	lung non-small cell carcinoma	treatment	ISO	ARID1A (Homo sapiens)	9068941	DNA:mutations	RGD	PMID:32791957 and REF_RGD_ID:126848874
ARID1A	Bonobo	lung squamous cell carcinoma	exacerbates	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:lung (human)	RGD	PMID:32823232 and REF_RGD_ID:126848760
ARID1A	Bonobo	nasopharynx carcinoma	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:nasopharynx(human)	RGD	PMID:31213911 and REF_RGD_ID:126781707
ARID1A	Bonobo	Neoplasm Metastasis	disease_progression	ISO	Arid1a (Mus musculus)	9068941	in lung and associated with hepatocellular carcinoma	RGD	PMID:25975202 and REF_RGD_ID:125097495
ARID1A	Bonobo	neuroblastoma		ISO	ARID1A (Homo sapiens)	9068941	DNA:mutations and loss of heterozygosity: :	RGD	PMID:23202128 and REF_RGD_ID:13439724
ARID1A	Bonobo	non-functioning pancreatic endocrine tumor	exacerbates	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:endocrine pancreas (human)	RGD	PMID:32282764 and REF_RGD_ID:126790640
ARID1A	Bonobo	ovarian clear cell carcinoma	treatment	ISO	ARID1A (Homo sapiens)	9068941	human cell in mouse model	RGD	PMID:21900401 and REF_RGD_ID:126725086
ARID1A	Bonobo	pre-eclampsia	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	associated with Fetal Growth Retardation more ...	RGD	PMID:32529396 and REF_RGD_ID:243065143
ARID1A	Bonobo	small intestine carcinoma	exacerbates	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:small intestine (human)	RGD	PMID:25400081 and REF_RGD_ID:126781719
ARID1A	Bonobo	stomach cancer	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	associated with Epstein-Barr Virus Infections and protein:decreased expression:stomach (human)	RGD	PMID:22915242 and REF_RGD_ID:126781706
ARID1A	Bonobo	stomach cancer	treatment	ISO	ARID1A (Homo sapiens)	9068941	human gene in mouse model	RGD	PMID:27323812 and REF_RGD_ID:125097523
ARID1A	Bonobo	stomach cancer		ISO	ARID1A (Homo sapiens)	9068941	mRNA:decreased expression:stomach (human)	RGD	PMID:29317648 and REF_RGD_ID:126781705
ARID1A	Bonobo	stomach cancer	exacerbates	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:stomach (human)	RGD	PMID:26637902 more ...
ARID1A	Bonobo	stomach cancer	exacerbates	ISO	ARID1A (Homo sapiens)	9068941	associated with Epstein-Barr Virus Infections and protein:decreased expression:stomach (human)	RGD	PMID:30664822 and REF_RGD_ID:126848733
ARID1A	Bonobo	stomach cancer	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:stomach (human)	RGD	PMID:26067140 more ...
ARID1A	Bonobo	stomach cancer	susceptibility	ISO	ARID1A (Homo sapiens)	9068941	DNA:missense mutation and nonsense mutation:exon 9: Pro912Thr (C>A), Gln920Ter (C >T) (Human)	RGD	PMID:32377988 and REF_RGD_ID:126848772
ARID1A	Bonobo	stomach cancer		ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:stomach (human)	RGD	PMID:28031120 and REF_RGD_ID:125097489
ARID1A	Bonobo	stomach carcinoma	disease_progression	ISO	ARID1A (Homo sapiens)	9068941	protein:decreased expression:stomach (human)	RGD	PMID:24767857 and REF_RGD_ID:125097484

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID1A	Bonobo	autism spectrum disorder		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism spectrum disorder	ClinVar	PMID:25741868 and PMID:28492532
ARID1A	Bonobo	cerebellar hypoplasia		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital cerebellar hypoplasia	ClinVar	PMID:25741868 and PMID:28492532
ARID1A	Bonobo	Coffin-Siris syndrome		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Coffin-Siris syndrome	ClinVar	PMID:25741868
ARID1A	Bonobo	Coffin-Siris syndrome 1		ISO	ARID1A (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:22426308 more ...
ARID1A	Bonobo	Coffin-Siris syndrome 2		ISO	ARID1A (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:18414213 more ...
ARID1A	Bonobo	colorectal cancer		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Colorectal cancer	ClinVar
ARID1A	Bonobo	endometrial carcinoma		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Endometrial carcinoma	ClinVar
ARID1A	Bonobo	epilepsy		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Seizure	ClinVar	PMID:25741868 and PMID:28492532
ARID1A	Bonobo	genetic disease		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:22009941 more ...
ARID1A	Bonobo	hepatoblastoma		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hepatoblastoma	ClinVar	PMID:26822237
ARID1A	Bonobo	Hydrops Fetalis		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Non-immune hydrops fetalis	ClinVar	PMID:25741868
ARID1A	Bonobo	intellectual disability		ISO	ARID1A (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 and PMID:28492532
ARID1A	Bonobo	intellectual disability		ISO	ARID1A (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868
ARID1A	Bonobo	Marfanoid Mental Retardation Syndrome, Autosomal		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Marfanoid habitus and intellectual disability	ClinVar	PMID:25741868 more ...
ARID1A	Bonobo	medulloblastoma		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Medulloblastoma	ClinVar	PMID:26822237
ARID1A	Bonobo	microcephaly		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Microcephaly	ClinVar	PMID:25741868 and PMID:28492532
ARID1A	Bonobo	Neurodevelopmental Disorders		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
ARID1A	Bonobo	ovary serous adenocarcinoma		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary	ClinVar
ARID1A	Bonobo	periventricular leukomalacia		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Periventricular leukomalacia	ClinVar	PMID:25741868 and PMID:28492532
ARID1A	Bonobo	retinitis pigmentosa 59		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Retinitis pigmentosa 59	ClinVar	PMID:28492532
ARID1A	Bonobo	septooptic dysplasia		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Septo-optic dysplasia sequence	ClinVar	PMID:25741868 and PMID:35885948
ARID1A	Bonobo	urinary bladder cancer		ISO	ARID1A (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 more ...
ARID1A	Bonobo	Urinary Bladder Neoplasm		ISO	ARID1A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Urinary Bladder Neoplasms	ClinVar	PMID:25741868 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID1A	Bonobo	adenocarcinoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:22484628
ARID1A	Bonobo	adenoid cystic carcinoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:23685749
ARID1A	Bonobo	Breast Neoplasms		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:31932695
ARID1A	Bonobo	Burkitt lymphoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:23143597
ARID1A	Bonobo	cholangiocarcinoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:24185509
ARID1A	Bonobo	Colorectal Neoplasms		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:27941798
ARID1A	Bonobo	embryonal rhabdomyosarcoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:29376028
ARID1A	Bonobo	Endometrial Neoplasms		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:23104009
ARID1A	Bonobo	esophagus adenocarcinoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:23525077
ARID1A	Bonobo	hepatocellular carcinoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:22561517 more ...
ARID1A	Bonobo	Microsatellite Instability		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:25701956
ARID1A	Bonobo	nephroblastoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:28825729
ARID1A	Bonobo	neuroblastoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:23202128
ARID1A	Bonobo	primary cutaneous T-cell non-Hodgkin lymphoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:26192916
ARID1A	Bonobo	Prostatic Neoplasms		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:29610475 and PMID:29662167
ARID1A	Bonobo	Sezary's disease		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:26551670
ARID1A	Bonobo	Stomach Neoplasms		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:22037554 more ...
ARID1A	Bonobo	T-cell non-Hodgkin lymphoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:26192917
ARID1A	Bonobo	transitional cell carcinoma		ISO	ARID1A (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:21822268

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID1A	Bonobo	Coffin-Siris syndrome 2		ISO	ARID1A (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID1A	Bonobo	cardiac chamber development	acts_upstream_of_or_within	ISO	MGI:5469314	9068941	PMID:23129809	MGI	PMID:23129809
ARID1A	Bonobo	cardiac muscle cell differentiation	acts_upstream_of_or_within	ISO	Arid1a (Mus musculus)	9068941	PMID:24335282	MGI	PMID:24335282
ARID1A	Bonobo	chromatin organization	acts_upstream_of_or_within	ISO	PR:Q6DIC0	9068941	PMID:11318604	MGI	PMID:11318604
ARID1A	Bonobo	chromatin remodeling	involved_in	IEA	UniProtKB:O14497 and ensembl:ENSP00000320485	150520179		Ensembl	GO_REF:0000107
ARID1A	Bonobo	chromatin remodeling	acts_upstream_of_or_within	ISO	MGI:3796520	9068941	PMID:18448678	MGI	PMID:18448678
ARID1A	Bonobo	chromatin remodeling	involved_in	IEA	InterPro:IPR021906	150520179		InterPro	GO_REF:0000002
ARID1A	Bonobo	embryo implantation	acts_upstream_of_or_within	ISO	MGI:3796520	9068941	PMID:18448678	MGI	PMID:18448678
ARID1A	Bonobo	forebrain development	acts_upstream_of_or_within	ISO	MGI:5469314	9068941	PMID:23129809	MGI	PMID:23129809
ARID1A	Bonobo	formation of primary germ layer	acts_upstream_of_or_within	ISO	MGI:3796520	9068941	PMID:18448678	MGI	PMID:18448678
ARID1A	Bonobo	gastrulation	acts_upstream_of_or_within	ISO	MGI:3796520	9068941	PMID:18448678	MGI	PMID:18448678
ARID1A	Bonobo	negative regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	ISO	Arid1a (Mus musculus)	9068941	PMID:23129809	MGI	PMID:23129809
ARID1A	Bonobo	negative regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	ISO	Arid1a (Mus musculus)	9068941	PMID:24335282	MGI	PMID:24335282
ARID1A	Bonobo	neural tube closure	acts_upstream_of_or_within	ISO	MGI:5469314	9068941	PMID:23129809	MGI	PMID:23129809
ARID1A	Bonobo	nucleosome disassembly	involved_in	IEA	UniProtKB:O14497 and ensembl:ENSP00000320485	150520179		Ensembl	GO_REF:0000107
ARID1A	Bonobo	optic cup formation involved in camera-type eye development	acts_upstream_of_or_within	ISO	MGI:5469314	9068941	PMID:23129809	MGI	PMID:23129809
ARID1A	Bonobo	placenta blood vessel development	acts_upstream_of_or_within	ISO	MGI:5469314	9068941	PMID:23129809	MGI	PMID:23129809
ARID1A	Bonobo	positive regulation of DNA-templated transcription	involved_in	IEA	UniProtKB:O14497 and ensembl:ENSP00000320485	150520179		Ensembl	GO_REF:0000107
ARID1A	Bonobo	positive regulation of DNA-templated transcription	involved_in	IEA	PANTHER:PTN000291923	150520179		TreeGrafter	GO_REF:0000118
ARID1A	Bonobo	regulation of transcription by RNA polymerase II	involved_in	IEA	PANTHER:PTN000291923	150520179		TreeGrafter	GO_REF:0000118
ARID1A	Bonobo	stem cell population maintenance	acts_upstream_of_or_within	ISO	MGI:3796520	9068941	PMID:18448678	MGI	PMID:18448678

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID1A	Bonobo	brahma complex	part_of	IEA	InterPro:IPR021906	150520179		InterPro	GO_REF:0000002
ARID1A	Bonobo	chromatin	located_in	IEA	UniProtKB:O14497 and ensembl:ENSP00000320485	150520179		Ensembl	GO_REF:0000107
ARID1A	Bonobo	nBAF complex	part_of	IEA	PANTHER:PTN000291923	150520179		TreeGrafter	GO_REF:0000118
ARID1A	Bonobo	npBAF complex	part_of	ISO	Arid1a (Mus musculus)	9068941	PMID:17640523	UniProt	PMID:17640523
ARID1A	Bonobo	nucleoplasm	located_in	IEA	UniProtKB:O14497 and ensembl:ENSP00000320485	150520179		Ensembl	GO_REF:0000107
ARID1A	Bonobo	nucleoplasm	located_in	IEA	PANTHER:PTN000291923	150520179		TreeGrafter	GO_REF:0000118
ARID1A	Bonobo	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044
ARID1A	Bonobo	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	150520179		UniProt	GO_REF:0000043
ARID1A	Bonobo	SWI/SNF complex	part_of	IEA	UniProtKB:O14497 and ensembl:ENSP00000320485	150520179		Ensembl	GO_REF:0000107
ARID1A	Bonobo	SWI/SNF complex	part_of	IEA	InterPro:IPR021906	150520179		InterPro	GO_REF:0000002
ARID1A	Bonobo	SWI/SNF complex	part_of	IEA	PANTHER:PTN000291923	150520179		TreeGrafter	GO_REF:0000118

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID1A	Bonobo	ATP-dependent chromatin remodeler activity	enables	ISO	Arid1a (Mus musculus)	9068941	PMID:23129809	MGI	PMID:23129809
ARID1A	Bonobo	DNA binding	enables	IEA	UniProtKB:O14497 and ensembl:ENSP00000320485	150520179		Ensembl	GO_REF:0000107
ARID1A	Bonobo	DNA binding	enables	IEA	InterPro:IPR001606 more ...	150520179		InterPro	GO_REF:0000002
ARID1A	Bonobo	nuclear receptor binding	enables	IEA	UniProtKB:O14497 and ensembl:ENSP00000320485	150520179		Ensembl	GO_REF:0000107
ARID1A	Bonobo	nucleosome binding	enables	IEA	PANTHER:PTN000291923	150520179		TreeGrafter	GO_REF:0000118
ARID1A	Bonobo	nucleosome binding	contributes_to	ISO	Arid1a (Mus musculus)	9068941	PMID:23129809	MGI	PMID:23129809
ARID1A	Bonobo	protein binding	enables	ISO	UniProtKB:P11388	9068941	PMID:23698369	IntAct	PMID:23698369
ARID1A	Bonobo	protein binding	enables	ISO	PR:O09106 more ...	9068941	PMID:24335282	MGI	PMID:24335282
ARID1A	Bonobo	protein binding	enables	ISO	PR:O54941 more ...	9068941	PMID:16287714	MGI	PMID:16287714
ARID1A	Bonobo	protein binding	enables	ISO	UniProtKB:P51532	9068941	PMID:11780067 more ...	IntAct	PMID:11780067 more ...
ARID1A	Bonobo	protein binding	enables	ISO	UniProtKB:P51531 and UniProtKB:P51532	9068941	PMID:12200431	IntAct	PMID:12200431
ARID1A	Bonobo	protein binding	enables	ISO	UniProtKB:Q92925	9068941	PMID:30021884	IntAct	PMID:30021884
ARID1A	Bonobo	protein binding	enables	ISO	UniProtKB:P50553	9068941	PMID:36931659	IntAct	PMID:36931659
ARID1A	Bonobo	protein binding	enables	ISO	UniProtKB:Q15788	9068941	PMID:17363140	BHF-UCL	PMID:17363140
ARID1A	Bonobo	protein binding	enables	ISO	UniProtKB:O35845	9068941	PMID:11988099	IntAct	PMID:11988099
ARID1A	Bonobo	protein binding	enables	ISO	UniProtKB:Q3TKT4	9068941	PMID:23540691 and PMID:23698369	IntAct	PMID:23540691 and PMID:23698369
ARID1A	Bonobo	protein binding	enables	ISO	UniProtKB:P51531 more ...	9068941	PMID:34591612 and PMID:35271311	IntAct	PMID:34591612 and PMID:35271311
ARID1A	Bonobo	protein binding	enables	ISO	UniProtKB:Q14526	9068941	PMID:19486893	IntAct	PMID:19486893
ARID1A	Bonobo	transcription coactivator activity	enables	IEA	UniProtKB:O14497 and ensembl:ENSP00000320485	150520179		Ensembl	GO_REF:0000107

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID1A	Bonobo	altered SWI/SNF family mediated chromatin remodeling pathway		ISO	ARID1A (Homo sapiens)	9068941		RGD	PMID:23355908 and REF_RGD_ID:8694154
ARID1A	Bonobo	pancreatic cancer pathway		ISO	ARID1A (Homo sapiens)	9068941		RGD	PMID:23355908 and REF_RGD_ID:8694154
ARID1A	Bonobo	SWI/SNF family mediated chromatin remodeling pathway		ISO	ARID1A (Homo sapiens)	9068941		RGD	PMID:21358755 more ...

PMID:22301074	PMID:30032202

ARID1A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	200,085,631 - 200,171,818 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	199,189,927 - 199,276,131 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	25,960,868 - 26,047,057 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	27,019,596 - 27,103,239 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	27,018,616 - 27,103,239 (+)	Ensembl	panpan1.1		panPan2

ARID1A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	26,696,015 - 26,782,104 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	26,693,236 - 26,782,104 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	27,022,506 - 27,108,595 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	26,895,109 - 26,981,188 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	26,706,666 - 26,792,737	NCBI
Celera	1	25,419,777 - 25,505,606 (+)	NCBI		Celera
Cytogenetic Map	1	p36.11	NCBI
HuRef	1	25,309,350 - 25,361,809 (+)	NCBI		HuRef
CHM1_1	1	27,135,825 - 27,221,852 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	26,533,960 - 26,620,059 (+)	NCBI		T2T-CHM13v2.0

Arid1a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	133,406,319 - 133,484,682 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	133,406,319 - 133,484,080 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	133,679,008 - 133,756,769 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	133,679,008 - 133,756,769 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	133,234,923 - 133,309,526 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	132,951,084 - 133,029,633 (-)	NCBI		MGSCv36	mm8
Celera	4	131,854,780 - 131,931,113 (-)	NCBI		Celera
Cytogenetic Map	4	D2.3	NCBI
cM Map	4	66.25	NCBI

Arid1a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	151,192,014 - 151,269,291 (-)	NCBI		GRCr8
mRatBN7.2	5	145,908,173 - 145,981,552 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	145,908,181 - 145,985,564 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	148,610,576 - 148,683,764 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	150,380,181 - 150,453,373 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	150,366,738 - 150,439,933 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	151,904,687 - 151,977,973 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	151,904,684 - 151,977,636 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	155,592,617 - 155,665,889 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	151,355,617 - 151,398,647 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	151,335,330 - 151,408,688 (+)	NCBI
Celera	5	144,329,185 - 144,372,216 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Arid1a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	6,068,631 - 6,120,759 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	6,068,631 - 6,120,759 (+)	NCBI	ChiLan1.0	ChiLan1.0

ARID1A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	73,331,606 - 73,401,151 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	73,324,852 - 73,401,102 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	69,909,026 - 69,978,542 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	73,894,794 - 73,964,327 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	73,895,984 - 73,965,235 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	70,719,680 - 70,789,191 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	71,725,226 - 71,794,735 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	72,728,646 - 72,798,165 (-)	NCBI		UU_Cfam_GSD_1.0

Arid1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	45,325,365 - 45,372,530 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936474	11,148,857 - 11,197,312 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARID1A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	84,049,087 - 84,123,349 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	84,049,729 - 84,124,302 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	77,607,507 - 77,623,800 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ARID1A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	105,981,549 - 106,066,093 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	105,981,290 - 106,065,672 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	10,365,063 - 10,448,898 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Arid1a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	10,672,735 - 10,759,634 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	10,672,673 - 10,759,634 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_008961658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014344091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000047127 ⟹ ENSPPAP00000024302

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	27,018,616 - 27,101,893 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000047130 ⟹ ENSPPAP00000024305

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	27,049,412 - 27,103,239 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000047132 ⟹ ENSPPAP00000024307

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	27,049,849 - 27,101,893 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000047137 ⟹ ENSPPAP00000024312

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	27,051,368 - 27,099,885 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000047140 ⟹ ENSPPAP00000024315

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	27,051,368 - 27,099,625 (+)	Ensembl

RefSeq Acc Id:

XM_008961658 ⟹ XP_008959906

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	200,085,631 - 200,171,818 (-)	NCBI
NHGRI_mPanPan1	1	199,189,927 - 199,276,131 (-)	NCBI
Mhudiblu_PPA_v0	1	25,960,868 - 26,047,057 (+)	NCBI
PanPan1.1	1	27,019,596 - 27,103,239 (+)	NCBI

Sequence:

show sequence

TGCGGCGGCGGCAGCTGCGGCGGCGGCCGCCTCGGAGGGCCCAACAAAGGAGCCACCACGCGCCCATGAGCCCCGGGAGCAGCGGCGGCGGGGGCAGCCGCTCGCCCGGACCCCTCAGCCATCCAGTC
CAATGGATCAGATGGGCAAGATGAGACCTCAGCCATATGGCGGGACTAACCCATACTCGCAGCAACAGGGACCTCCGTCAGGACCGCAGCAAGGACATGGGTACCCAGGGCAGCCATATGGGTCACAG
ACCCCGCAGCGGTACCCGATGACCATGCAGGGCCGGGCGCAGAGTGCCATGGGCGGCCTCTCTTATACACAGCAGATTCCTCCTTATGGACAACAAGGCCCCAGCGGGTATGGTCAACAGGGCCAGAC
TCCATATTACAACCAGCAAAGTCCTCACCCTCAGCAGCAGCAGCCACCCTACTCCCAGCAACCACCGTCCCAGACCCCTCATGCCCAACCTTCGTATCAGCAGCAGCCACAGTCTCAACCACCACAGC
TCCAGTCCTCTCAGCCTCCATACTCCCAGCAGCCATCCCAGCCTCCACATCAGCAGTCCCCGGCTCCATACCCCTCCCAGCAGTCCACGACACAGCAGCACCCCCAGAGCCAGCCCCCCTACTCACAG
CCACAGGCTCAGTCTCCTTACCAGCAGCAGCAACCTCAGCAGCCAGCACCCTCGACGCTCTCCCAGCAGGCTGCGTATCCTCAGCCCCAGTCTCAGCAGTCCCAGCAAACTGCCTATTCCCAGCAGCG
CTTCCCTCCACCGCAGGAGCTATCTCAAGATTCATTTGGGTCTCAGGCATCCTCAGCCCCCTCAATGACCTCCAGTAAGGGAGGGCAAGAAGATATGAACCTGAGCCTTCAGTCAAGACCCTCCAGCT
TGCCTGATCTATCTGGTTCAATAGATGACCTCCCCATGGGGACAGAAGGAGCTCTGAGTCCTGGAGTGAGCACATCAGGGATTTCCAGCAGCCAAGGAGAGCAGAGTAATCCAGCTCAGTCTCCTTTC
TCTCCTCATACCTCCCCTCACCTGCCTGGCATCCGAGGCCCTTCCCCGTCCCCTGTTGGCTCTCCCGCCAGTGTTGCTCAGTCTCGCTCAGGACCACTCTCGCCTGCTGCAGTGCCAGGCAACCAGAT
GCCACCTCGGCCACCCAGTGGCCAGTCGGACAGCATCATGCATCCTTCCATGAACCAATCAAGCATTGCCCAAGATCGAGGTTATATGCAGAGGAACCCCCAGATGCCCCAGTACAGTTCCCCCCAGC
CCGGCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATACACACAGGCATGGGCTCCTACCAGCAGAACTCCATGGGGAGCTATGGTCCCCAGGGGGGTCAGTATGGCCCACAAGGTGGCTAC
CCCAGGCAGCCAAACTATAATGCCTTGCCCAATGCCAACTACCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTGCCGGAGGTCAAATGCATGGACAGCCTGGCATCCCACCTTATGGCAC
ACTCCCTCCAGGGAGGATGAGTCACGCCTCCATGGGCAACCGGCCTTATGGCCCTAACATGGCCAATATGCCACCTCAGGTTGGGTCAGGGATGTGTCCCCCACCAGGGGGCATGAACCGGAAAACCC
AAGAAACTGCTGTCGCCATGCATGTTGCTGCCAACTCTATCCAAAACAGGCCGCCAGGCTACCCCAATATGAATCAAGGGGGCATGATGGGAACTGGACCTCCTTATGGACAAGGGATTAATAGTATG
GCTGGCATGATCAACCCTCAGGGACCCCCATATTCCATGGGTGGAACCATGGCCAACAATTCTGCAGGGATGGCAGCCAGCCCAGAGATGATGGGCCTTGGGGATGTAAAGTTAACTCCAGCCCCCAA
AATGAACAACAAGGCAGATGGGACACCCAAGACAGAATCCAAATCCAAGAAATCCAGTTCTTCTACTACAACCAATGAGAAGATCACCAAGTTGTATGAGCTGGGTGGTGAGCCTGAGAGGAAGATGT
GGGTGGACCGTTATCTGGCCTTCACTGAGGAGAAGGCCATGGGCATGACAAATCTGCCTGCTGTGGGTAGGAAACCTCTGGACCTCTATCGCCTCTATGTGTCTGTGAAGGAGATTGGTGGATTGACT
CAGGTCAACAAGAACAAAAAATGGCGGGAACTTGCAACCAACCTCAATGTGGGCACATCAAGCAGTGCTGCCAGCTCCTTGAAAAAGCAGTATATCCAGTGTCTCTATGCCTTTGAATGCAAGATTGA
ACGGGGAGAAGACCCTCCCCCAGACATCTTTGCAGCTGCTGATTCCAAGAAGTCCCAGCCCAAGATCCAGCCTCCCTCTCCTGCGGGATCAGGATCTATGCAGGGGCCCCAGACTCCCCAGTCAACCA
GCAGTTCCATGGCAGAAGGAGGAGACTTAAAGCCACCAACTCCAGCATCCACACCACACAGTCAGATCCCCCCATTGCCAGGCATGAGCAGGAGCAATTCAGTTGGGATCCAGGATGCCTTTAATGAT
GGAAGTGACTCCACATTCCAGAAGCGGAATTCCATGACTCCAAACCCTGGGTATCAGCCCAGTATGAATACCTCTGACATGATGGGGCGCATGTCCTATGAGCCAAATAAGGATCCTTATGGCAGCAT
GAGGAAAGCTCCAGGGAGTGATCCCTTCATGTCCTCAGGGCAGGGCCCCAACGGCGGGATGGGTGACCCCTACAGTCGTGCTGCCGGCCCTGGGCTAGGAAATGTGGCGATGGGACCACGACAGCACT
ATCCCTATGGAGGTCCTTATGACAGAGTGAGGACGGAGCCTGGAATAGGGCCTGAGGGAAACATGAGCACTGGGGCCCCACAGCCGAATCTCATGCCTTCCAACCCAGACTCGGGGATGTATTCTCCT
AGCCGCTACCCCCCGCAGCAGCAGCAGCAGCAGCAGCAGCAACGACATGATTCCTATGGCAATCAGTTCTCCACCCAAGGCACCCCTTCTGGCAGCCCCTTCCCCAGCCAGCAGACTACAATGTATCA
ACAGCAACAGCAGAATTACAAGCGGCCAATGGATGGCACATATGGCCCTCCTGCCAAGCGGCACGAAGGGGAGATGTACAGCGTGCCATACAGCACTGGGCAGGGGCAGCCTCAGCAGCAGCAGTTGC
CCCCAGCCCAGCCCCAGCCTGCCAGCCAGCAACAAGCTGCCCAGCCTTCCCCTCAGCAAGATGTATACAACCAGTATGGCAATGCCTATCCTGCCACTGCCACAGCTGCTACTGAGCGCCGACCAGCA
GGCGGCCCCCAGAACCAATTTCCATTCCAGTTTGGCCGAGACCGTGTCTCTGCACCCCCTGGCACCAATGCCCAGCAAAACATGCCACCACAAATGATGGGCGGCCCCATACAGGCATCAGCTGAGGT
TGCTCAGCAAGGCACCATGTGGCAGGGGCGTAATGACATGACCTATAATTATGCCAACAGGCAGAGCACGGGCTCTGCCCCCCAGGGCCCCGCCTATCATGGCGTGAACCGAACAGATGAAATGCTGC
ACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGGTCCCTCTGCCCCTGTGCCCCCCATGACAAGGCCCCCTCCATCTAACTACCAGCCCCCGCCA
AGCATGCAGAATCACATTCCTCAGGTATCCAGCCCTGCTCCCCTGCCCCGGCCAATGGAGAACCGCACCTCTCCTAGCAAGTCTCCATTCCTGCACTCTGGGATGAAAATGCAGAAGGCAGGTCCCCC
AGTACCTGCCTCACACATAGCACCTGCCCCTGTGCAGCCCCCCATGATTCGGCGGGATATCACCTTCCCACCTGGCTCTGTTGAAGCCACACAGCCTGTGTTGAAGCAGAGGAGGCGGCTCACAATGA
AAGACATTGGAACCCCGGAGGCATGGCGGGTAATGATGTCCCTCAAGTCTGGTCTCCTGGCAGAGAGCACATGGGCATTAGATACCATCAACATCCTGCTGTATGATGACAACAGCATCATGACCTTT
AACCTCAGTCAGCTCCCAGGGTTGCTAGAGCTCCTTGTAGAATATTTCCGACGATGCCTGATTGAGATCTTTGGCATTTTAAAGGAGTATGAGGTGGGTGACCCAGGACAGAGAACGCTACTGGATCC
TGGGAGGTTCAGCAAGGTGTCTAGTCCAGCTCCCATGGAGGGTGGGGAAGAAGAAGAAGAACTTCTAGGTCCTAAACTAGAAGAGGAAGAAGAAGAGGAAGTAGTTGAAAATGATGAGGAGATAGCCT
TTTCAGGCAAGGACAAGCCAGCTTCAGAGAATAGTGAGGAGAAGCTGATCAGTAAGTTTGACAAGCTTCCAGTAAAGATCGTACAGAAGAATGACCCATTTGTGGTGGACTGCTCAGATAAGCTTGGG
CGTGTGCAGGAGTTTGACAGTGGCCTGCTGCACTGGCGGATTGGTGGGGGGGACACCACTGAGCATATCCAGACCCACTTTGAGAGCAAGACAGAGCTGCTGCCTTCCCGGCCTCACGCACCCTGCCC
ACCAGCCCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGAGGGGCCCCCACCTGATGGACCTCCAGAAAAACGGATCACAGCCACTATGGATGACATGTTGTCTACTC
GGTCTAGCACCTTGACCGAGGATGGAGCTAAGAGTTCAGAGGCCATCAAGGAGAGCAGCAAGTTTCCATTTGGCATTAGCCCAGCACAGAGCCACCGGAACATCAAGATCCTAGAGGACGAACCCCAC
AGTAAGGATGAGACCCCACTGTGTACCCTTCTGGACTGGCAGGATTCTCTTGCCAAGCGCTGCGTCTGTGTCTCCAATACCATTCGAAGCCTGTCATTTGTGCCAGGCAATGACTTTGAGATGTCCAA
ACACCCAGGGCTGCTGCTCATCCTGGGCAAGCTGATCCTGCTGCACCACAAGCACCCAGAACGGAAGCAGGCACCACTAACTTATGAAAAGGAGGAGGAACAGGACCAAGGGGTGAGCTGCAACAAAG
TGGAGTGGTGGTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATCTCGGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCCTGTCCTGGACGGACTC
CTACACTGGGCAGTTTGCCCTTCAGCTGAAGCCCAGGACCCCTTTTCCACCCTGGGCCCCAATGCCGTCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCTCAGCAAACTCAGCATCCAGGACAACAA
TGTGGACCTGATTCTGGCCACACCCCCCTTCAGCCGCCTGGAGAAGTTGTATAGCACTATGGTGCGCTTCCTCAGTGACCGAAAGAACCCGGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACC
TGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTC
CACATGCAGAACCCACCCTTTGAGCCAACTAGTGTGGACATGATGCGGCGGGCTGCCCGCGCGCTGCTTGCCTTGGCCAAGGTGGACGAGAACCACTCAGAGTTTACTCTGTACGAATCACGGCTGTT
GGACATCTCGGTATCACCGTTGATGAACTCATTGGTTTCACAAGTCATTTGTGATGTACTGTTTTTGATTGGCCAGTCATGACAGCCGTGGGACACCTCCCCCCCCGTGTGTGTGTGCGTGTGTGGAG
AACTTAGAAACTGACTGTTGCCCTTTATTTATGCAAAACCACCTCAGAATCCAGTTTACCCTGTGCTGTCCAGCTTCTCCCTTGGGAAAAAGTCTCTCCTGTTTCTCTTTCCTCCTTCCACCTCCCCT
CCCTCCATCACCTCACGCCTTTCTGTTCCTTGTCCTCACCTTACTCCCCTCAGGACCCTACCCCACCCTCTTTGAAAAGACAAAGCTCTGCCTACATAGAAGACTTTTTTTATTTTAACCAAAGTTAC
TGTTGTTTACAGTGAGTTTGGGGAAAAAAAATAAAATAAAAATGGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTTTAATGGTAAAAAAAAAAAAAGAAAAATACAAAAAA
AAAATTCTGAAGGACAAAAAAGGTGACTGCTGAACTGTGTGTGGTTTATTGTTGTACATTCACAATCTTGCAGGAGCCAAGAAGTTCGCAGTTGTGAACAGACCCTGTTCACTGGAGAGGCCTGTGCA
GTAGAGTGTAGACCCTTTCATGTACTGTACTGTACACCTGATACTGTAAACATACTGTAATAATAATGTCTCACATGGAAACAGAAAACGCTGGGTCAGCAGCAAGCTGTAGTTTTTAAAAATGTTTT
TAGTTAAACGTTGAGGAGAAAAAAAAAAGGCTTTTCCCCCAAAGTATCATGTGTGAACCTACAACACCCTGACCTCTTTCTCTCCTCCTTGATTGTATGAATAACCCTGAGATCACCTCTTAGAACTG
GTTTTAACCTTTAGCTGCAGCGGCTACGCTGCCACGTGTGTATATATATGACGTTGTACATTGCACATACCCTTGGATCCCCACAGTTTGGTCCTCCTCCCAGCTACCCCTTTATAGTATGACGAGTT
AACAAGTTGGTGACCTGCACAAAGCGAGACACAGCTATTTAATCTCTTGCCAGACATCGCCCCTCTTGGTGCGATGCTGTACAGGTCTCTGTAAAAAGTCCATGCTGTCTCAGCAGCCAATCAACTTA
TAGTTTATTTTTTTCTGGGTTTTTGTTTTGTTTTGTTTTCTTTCTAATCGAGGTGTGAAAAAGTTCTAGGTTCAGTTGAAGTTCTGATGAAGAAACACAATTGAGATTTTTTCAGTGATAAAATCTGC
ATATTTGTATTTCAACAATGTAGCTAAAACTTGATGTAAATTCCTCCTTTTTTCCTTTTTTGGCTTAATGAATATCATTTATTCAGTATGAAATCTTTATACTATATGTTCCACGTGTTAAGAATAAA
TGTACATTAAATCTTGGTAA

hide sequence

RefSeq Acc Id:

XM_014344091 ⟹ XP_014199577

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	200,085,631 - 200,171,497 (-)	NCBI
NHGRI_mPanPan1	1	199,189,927 - 199,275,803 (-)	NCBI
Mhudiblu_PPA_v0	1	25,961,189 - 26,046,071 (+)	NCBI
PanPan1.1	1	27,019,596 - 27,101,893 (+)	NCBI

Sequence:

show sequence

TGCGGCGGCGGCAGCTGCGGCGGCGGCCGCCTCGGAGGGCCCAACAAAGGAGCCACCACGCGCC
CATGAGCCCCGGGAGCAGCGGCGGCGGGGGCAGCCGCTCGCCCGGACCCCTCAGCCATCCAGTCCAATGGATCAGATGGGCAAGATGAGACCTCAGCCATATGGCGGGACTAACCCATACTCGCAGCA
ACAGGGACCTCCGTCAGGACCGCAGCAAGGACATGGGTACCCAGGGCAGCCATATGGGTCACAGACCCCGCAGCGGTACCCGATGACCATGCAGGGCCGGGCGCAGAGTGCCATGGGCGGCCTCTCTT
ATACACAGCAGATTCCTCCTTATGGACAACAAGGCCCCAGCGGGTATGGTCAACAGGGCCAGACTCCATATTACAACCAGCAAAGTCCTCACCCTCAGCAGCAGCAGCCACCCTACTCCCAGCAACCA
CCGTCCCAGACCCCTCATGCCCAACCTTCGTATCAGCAGCAGCCACAGTCTCAACCACCACAGCTCCAGTCCTCTCAGCCTCCATACTCCCAGCAGCCATCCCAGCCTCCACATCAGCAGTCCCCGGC
TCCATACCCCTCCCAGCAGTCCACGACACAGCAGCACCCCCAGAGCCAGCCCCCCTACTCACAGCCACAGGCTCAGTCTCCTTACCAGCAGCAGCAACCTCAGCAGCCAGCACCCTCGACGCTCTCCC
AGCAGGCTGCGTATCCTCAGCCCCAGTCTCAGCAGTCCCAGCAAACTGCCTATTCCCAGCAGCGCTTCCCTCCACCGCAGGAGCTATCTCAAGATTCATTTGGGTCTCAGGCATCCTCAGCCCCCTCA
ATGACCTCCAGTAAGGGAGGGCAAGAAGATATGAACCTGAGCCTTCAGTCAAGACCCTCCAGCTTGCCTGATCTATCTGGTTCAATAGATGACCTCCCCATGGGGACAGAAGGAGCTCTGAGTCCTGG
AGTGAGCACATCAGGGATTTCCAGCAGCCAAGGAGAGCAGAGTAATCCAGCTCAGTCTCCTTTCTCTCCTCATACCTCCCCTCACCTGCCTGGCATCCGAGGCCCTTCCCCGTCCCCTGTTGGCTCTC
CCGCCAGTGTTGCTCAGTCTCGCTCAGGACCACTCTCGCCTGCTGCAGTGCCAGGCAACCAGATGCCACCTCGGCCACCCAGTGGCCAGTCGGACAGCATCATGCATCCTTCCATGAACCAATCAAGC
ATTGCCCAAGATCGAGGTTATATGCAGAGGAACCCCCAGATGCCCCAGTACAGTTCCCCCCAGCCCGGCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATACACACAGGCATGGGCTCCTA
CCAGCAGAACTCCATGGGGAGCTATGGTCCCCAGGGGGGTCAGTATGGCCCACAAGGTGGCTACCCCAGGCAGCCAAACTATAATGCCTTGCCCAATGCCAACTACCCCAGTGCAGGCATGGCTGGAG
GCATAAACCCCATGGGTGCCGGAGGTCAAATGCATGGACAGCCTGGCATCCCACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACGCCTCCATGGGCAACCGGCCTTATGGCCCTAACATGGCC
AATATGCCACCTCAGGTTGGGTCAGGGATGTGTCCCCCACCAGGGGGCATGAACCGGAAAACCCAAGAAACTGCTGTCGCCATGCATGTTGCTGCCAACTCTATCCAAAACAGGCCGCCAGGCTACCC
CAATATGAATCAAGGGGGCATGATGGGAACTGGACCTCCTTATGGACAAGGGATTAATAGTATGGCTGGCATGATCAACCCTCAGGGACCCCCATATTCCATGGGTGGAACCATGGCCAACAATTCTG
CAGGGATGGCAGCCAGCCCAGAGATGATGGGCCTTGGGGATGTAAAGTTAACTCCAGCCCCCAAAATGAACAACAAGGCAGATGGGACACCCAAGACAGAATCCAAATCCAAGAAATCCAGTTCTTCT
ACTACAACCAATGAGAAGATCACCAAGTTGTATGAGCTGGGTGGTGAGCCTGAGAGGAAGATGTGGGTGGACCGTTATCTGGCCTTCACTGAGGAGAAGGCCATGGGCATGACAAATCTGCCTGCTGT
GGGTAGGAAACCTCTGGACCTCTATCGCCTCTATGTGTCTGTGAAGGAGATTGGTGGATTGACTCAGGTCAACAAGAACAAAAAATGGCGGGAACTTGCAACCAACCTCAATGTGGGCACATCAAGCA
GTGCTGCCAGCTCCTTGAAAAAGCAGTATATCCAGTGTCTCTATGCCTTTGAATGCAAGATTGAACGGGGAGAAGACCCTCCCCCAGACATCTTTGCAGCTGCTGATTCCAAGAAGTCCCAGCCCAAG
ATCCAGCCTCCCTCTCCTGCGGGATCAGGATCTATGCAGGGGCCCCAGACTCCCCAGTCAACCAGCAGTTCCATGGCAGAAGGAGGAGACTTAAAGCCACCAACTCCAGCATCCACACCACACAGTCA
GATCCCCCCATTGCCAGGCATGAGGAGCAATTCAGTTGGGATCCAGGATGCCTTTAATGATGGAAGTGACTCCACATTCCAGAAGCGGAATTCCATGACTCCAAACCCTGGGTATCAGCCCAGTATGA
ATACCTCTGACATGATGGGGCGCATGTCCTATGAGCCAAATAAGGATCCTTATGGCAGCATGAGGAAAGCTCCAGGGAGTGATCCCTTCATGTCCTCAGGGCAGGGCCCCAACGGCGGGATGGGTGAC
CCCTACAGTCGTGCTGCCGGCCCTGGGCTAGGAAATGTGGCGATGGGACCACGACAGCACTATCCCTATGGAGGTCCTTATGACAGAGTGAGGACGGAGCCTGGAATAGGGCCTGAGGGAAACATGAG
CACTGGGGCCCCACAGCCGAATCTCATGCCTTCCAACCCAGACTCGGGGATGTATTCTCCTAGCCGCTACCCCCCGCAGCAGCAGCAGCAGCAGCAGCAGCAACGACATGATTCCTATGGCAATCAGT
TCTCCACCCAAGGCACCCCTTCTGGCAGCCCCTTCCCCAGCCAGCAGACTACAATGTATCAACAGCAACAGCAGAATTACAAGCGGCCAATGGATGGCACATATGGCCCTCCTGCCAAGCGGCACGAA
GGGGAGATGTACAGCGTGCCATACAGCACTGGGCAGGGGCAGCCTCAGCAGCAGCAGTTGCCCCCAGCCCAGCCCCAGCCTGCCAGCCAGCAACAAGCTGCCCAGCCTTCCCCTCAGCAAGATGTATA
CAACCAGTATGGCAATGCCTATCCTGCCACTGCCACAGCTGCTACTGAGCGCCGACCAGCAGGCGGCCCCCAGAACCAATTTCCATTCCAGTTTGGCCGAGACCGTGTCTCTGCACCCCCTGGCACCA
ATGCCCAGCAAAACATGCCACCACAAATGATGGGCGGCCCCATACAGGCATCAGCTGAGGTTGCTCAGCAAGGCACCATGTGGCAGGGGCGTAATGACATGACCTATAATTATGCCAACAGGCAGAGC
ACGGGCTCTGCCCCCCAGGGCCCCGCCTATCATGGCGTGAACCGAACAGATGAAATGCTGCACACAGATCAGAGGGCCAACCACGAAGGCTCGTGGCCTTCCCATGGCACACGCCAGCCCCCATATGG
TCCCTCTGCCCCTGTGCCCCCCATGACAAGGCCCCCTCCATCTAACTACCAGCCCCCGCCAAGCATGCAGAATCACATTCCTCAGGTATCCAGCCCTGCTCCCCTGCCCCGGCCAATGGAGAACCGCA
CCTCTCCTAGCAAGTCTCCATTCCTGCACTCTGGGATGAAAATGCAGAAGGCAGGTCCCCCAGTACCTGCCTCACACATAGCACCTGCCCCTGTGCAGCCCCCCATGATTCGGCGGGATATCACCTTC
CCACCTGGCTCTGTTGAAGCCACACAGCCTGTGTTGAAGCAGAGGAGGCGGCTCACAATGAAAGACATTGGAACCCCGGAGGCATGGCGGGTAATGATGTCCCTCAAGTCTGGTCTCCTGGCAGAGAG
CACATGGGCATTAGATACCATCAACATCCTGCTGTATGATGACAACAGCATCATGACCTTTAACCTCAGTCAGCTCCCAGGGTTGCTAGAGCTCCTTGTAGAATATTTCCGACGATGCCTGATTGAGA
TCTTTGGCATTTTAAAGGAGTATGAGGTGGGTGACCCAGGACAGAGAACGCTACTGGATCCTGGGAGGTTCAGCAAGGTGTCTAGTCCAGCTCCCATGGAGGGTGGGGAAGAAGAAGAAGAACTTCTA
GGTCCTAAACTAGAAGAGGAAGAAGAAGAGGAAGTAGTTGAAAATGATGAGGAGATAGCCTTTTCAGGCAAGGACAAGCCAGCTTCAGAGAATAGTGAGGAGAAGCTGATCAGTAAGTTTGACAAGCT
TCCAGTAAAGATCGTACAGAAGAATGACCCATTTGTGGTGGACTGCTCAGATAAGCTTGGGCGTGTGCAGGAGTTTGACAGTGGCCTGCTGCACTGGCGGATTGGTGGGGGGGACACCACTGAGCATA
TCCAGACCCACTTTGAGAGCAAGACAGAGCTGCTGCCTTCCCGGCCTCACGCACCCTGCCCACCAGCCCCTCGGAAGCATGTGACAACAGCAGAGGGTACACCAGGGACAACAGACCAGGAGGGGCCC
CCACCTGATGGACCTCCAGAAAAACGGATCACAGCCACTATGGATGACATGTTGTCTACTCGGTCTAGCACCTTGACCGAGGATGGAGCTAAGAGTTCAGAGGCCATCAAGGAGAGCAGCAAGTTTCC
ATTTGGCATTAGCCCAGCACAGAGCCACCGGAACATCAAGATCCTAGAGGACGAACCCCACAGTAAGGATGAGACCCCACTGTGTACCCTTCTGGACTGGCAGGATTCTCTTGCCAAGCGCTGCGTCT
GTGTCTCCAATACCATTCGAAGCCTGTCATTTGTGCCAGGCAATGACTTTGAGATGTCCAAACACCCAGGGCTGCTGCTCATCCTGGGCAAGCTGATCCTGCTGCACCACAAGCACCCAGAACGGAAG
CAGGCACCACTAACTTATGAAAAGGAGGAGGAACAGGACCAAGGGGTGAGCTGCAACAAAGTGGAGTGGTGGTGGGACTGCTTGGAGATGCTCCGGGAAAACACCTTGGTTACACTCGCCAACATCTC
GGGGCAGTTGGACCTATCTCCATACCCCGAGAGCATTTGCCTGCCTGTCCTGGACGGACTCCTACACTGGGCAGTTTGCCCTTCAGCTGAAGCCCAGGACCCCTTTTCCACCCTGGGCCCCAATGCCG
TCCTTTCCCCGCAGAGACTGGTCTTGGAAACCCTCAGCAAACTCAGCATCCAGGACAACAATGTGGACCTGATTCTGGCCACACCCCCCTTCAGCCGCCTGGAGAAGTTGTATAGCACTATGGTGCGC
TTCCTCAGTGACCGAAAGAACCCGGTGTGCCGGGAGATGGCTGTGGTACTGCTGGCCAACCTGGCTCAGGGGGACAGCCTGGCAGCTCGTGCCATTGCAGTGCAGAAGGGCAGTATCGGCAACCTCCT
GGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCAGGCCAGCCTCCTCCACATGCAGAACCCACCCTTTGAGCCAACTAGTGTGGACATGATGCGGCGGGCTGCCCGCGCGCTGC
TTGCCTTGGCCAAGGTGGACGAGAACCACTCAGAGTTTACTCTGTACGAATCACGGCTGTTGGACATCTCGGTATCACCGTTGATGAACTCATTGGTTTCACAAGTCATTTGTGATGTACTGTTTTTG
ATTGGCCAGTCATGA

hide sequence


Protein RefSeqs	XP_008959906	(Get FASTA)	NCBI Sequence Viewer
	XP_014199577	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000024302.1
	ENSPPAP00000024305.1
	ENSPPAP00000024307.1
	ENSPPAP00000024312.1
	ENSPPAP00000024315.1

RefSeq Acc Id:	XP_008959906 ⟸ XM_008961658
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9B7U2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQL QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSL PDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQP GSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQ ETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEMMGLGDVKLTPAPKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMW VDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTS SSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHY PYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLP PAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLH TDQRANHEGSWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMK DIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVVENDEEIAF SGKDKPASENSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTR SSTLTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV EWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANL AQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS hide sequence

RefSeq Acc Id:	XP_014199577 ⟸ XM_014344091
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9B7U2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQL QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSL PDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQP GSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQ ETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEMMGLGDVKLTPAPKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMW VDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTS SSMAEGGDLKPPTPASTPHSQIPPLPGMRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYP YGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPP AQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHT DQRANHEGSWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKD IGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVVENDEEIAFS GKDKPASENSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRS STLTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVE WWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLA QGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS hide sequence

Ensembl Acc Id:

ENSPPAP00000024302 ⟸ ENSPPAT00000047127

Ensembl Acc Id:

ENSPPAP00000024305 ⟸ ENSPPAT00000047130

Ensembl Acc Id:

ENSPPAP00000024307 ⟸ ENSPPAT00000047132

Protein Domains

ARID

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000035294	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000047127.1	UniProtKB/TrEMBL
	ENSPPAT00000047130.1	UniProtKB/TrEMBL
	ENSPPAT00000047132.1	UniProtKB/TrEMBL
	ENSPPAT00000047137.1	UniProtKB/TrEMBL
	ENSPPAT00000047140.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.60	UniProtKB/TrEMBL
	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARID_dom	UniProtKB/TrEMBL
	ARID_dom_sf	UniProtKB/TrEMBL
	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	BAF250/Osa	UniProtKB/TrEMBL
	BAF250_C	UniProtKB/TrEMBL
	BAF250a	UniProtKB/TrEMBL
KEGG Report	pps:100988406	UniProtKB/TrEMBL
NCBI Gene	LOC100988406	ENTREZGENE
PANTHER	PTHR12656	UniProtKB/TrEMBL
	PTHR12656:SF12	UniProtKB/TrEMBL
Pfam	ARID	UniProtKB/TrEMBL
	BAF250_C	UniProtKB/TrEMBL
PROSITE	ARID	UniProtKB/TrEMBL
SMART	ARID	UniProtKB/TrEMBL
	BRIGHT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46774	UniProtKB/TrEMBL
	SSF48371	UniProtKB/TrEMBL
UniProt	A0A2R9B3Y7_PANPA	UniProtKB/TrEMBL
	A0A2R9B3Z5_PANPA	UniProtKB/TrEMBL
	A0A2R9B3Z8_PANPA	UniProtKB/TrEMBL
	A0A2R9B7U2	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9B7V2_PANPA	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-07-01	ARID1A	AT-rich interaction domain 1A	LOC100988406	AT-rich interactive domain-containing protein 1A	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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