KIF2C (kinesin family member 2C) - Rat Genome Database

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Gene: KIF2C (kinesin family member 2C) Pan paniscus
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Symbol: KIF2C
Name: kinesin family member 2C
RGD ID: 12036512
Description: ENCODES a protein that exhibits ATP binding (inferred); cytoskeletal motor activity (inferred); microtubule binding (inferred); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (inferred); cell division (inferred); chromosome segregation (inferred); ASSOCIATED WITH Charcot-Marie-Tooth disease dominant intermediate C (ortholog); colorectal cancer (ortholog); contact dermatitis (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: kinesin-like protein KIF2C
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21182,040,600 - 182,075,678 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11181,182,021 - 181,212,021 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0144,042,565 - 44,070,922 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1145,408,736 - 45,436,844 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl145,408,734 - 45,436,844 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
KIF2C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21182,040,600 - 182,075,678 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11181,182,021 - 181,212,021 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0144,042,565 - 44,070,922 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1145,408,736 - 45,436,844 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl145,408,734 - 45,436,844 (+)Ensemblpanpan1.1panPan2
KIF2C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38144,739,837 - 44,767,767 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl144,739,818 - 44,767,767 (+)EnsemblGRCh38hg38GRCh38
GRCh37145,205,509 - 45,233,439 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36144,978,138 - 45,006,003 (+)NCBINCBI36Build 36hg18NCBI36
Build 34144,874,643 - 44,902,506NCBI
Celera143,488,387 - 43,516,329 (+)NCBICelera
Cytogenetic Map1p34.1NCBI
HuRef143,319,109 - 43,346,516 (+)NCBIHuRef
CHM1_1145,321,397 - 45,349,350 (+)NCBICHM1_1
T2T-CHM13v2.0144,610,697 - 44,638,762 (+)NCBIT2T-CHM13v2.0
Kif2c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394117,016,830 - 117,039,821 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4117,016,836 - 117,039,836 (-)EnsemblGRCm39 Ensembl
GRCm384117,159,633 - 117,182,624 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4117,159,639 - 117,182,639 (-)EnsemblGRCm38mm10GRCm38
MGSCv374116,832,239 - 116,855,229 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364116,657,593 - 116,680,496 (-)NCBIMGSCv36mm8
MGSCv364114,927,056 - 114,944,901 (-)NCBIMGSCv36mm8
Celera4115,898,246 - 115,917,726 (-)NCBICelera
Cytogenetic Map4D1NCBI
cM Map453.42NCBI
Kif2c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85135,873,925 - 135,899,267 (-)NCBIGRCr8
mRatBN7.25130,637,347 - 130,662,680 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5130,637,347 - 130,662,637 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5133,262,014 - 133,287,314 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05135,016,618 - 135,041,922 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05135,039,049 - 135,064,353 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05136,027,923 - 136,053,268 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5136,027,934 - 136,053,210 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05139,820,990 - 139,846,611 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45137,473,698 - 137,498,974 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15137,479,397 - 137,500,542 (-)NCBI
Celera5129,158,808 - 129,184,100 (-)NCBICelera
Cytogenetic Map5q36NCBI
Kif2c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546413,453,217 - 13,475,322 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546413,453,637 - 13,475,447 (-)NCBIChiLan1.0ChiLan1.0
KIF2C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11515,558,024 - 15,579,371 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1515,558,021 - 15,579,217 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1515,678,810 - 15,699,980 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01515,709,388 - 15,730,544 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1515,709,385 - 15,730,393 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11515,511,198 - 15,532,391 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01515,577,722 - 15,598,980 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01515,651,928 - 15,673,111 (-)NCBIUU_Cfam_GSD_1.0
Kif2c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505860,141,752 - 60,175,391 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647425,978,707 - 26,000,140 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647425,967,095 - 26,000,678 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF2C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6166,556,776 - 166,577,904 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16166,556,765 - 166,577,904 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26154,001,824 - 154,022,498 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIF2C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12088,023,250 - 88,054,715 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2088,023,207 - 88,055,176 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603328,883,901 - 28,912,000 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kif2c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624906633,754 - 660,254 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624906633,635 - 660,149 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000066112   ⟹   ENSPPAP00000043177
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl145,408,734 - 45,436,844 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000066113   ⟹   ENSPPAP00000043178
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl145,415,955 - 45,436,844 (+)Ensembl
RefSeq Acc Id: XM_003812801   ⟹   XP_003812849
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21182,040,600 - 182,075,658 (-)NCBI
NHGRI_mPanPan11181,182,021 - 181,212,021 (-)NCBI
Mhudiblu_PPA_v0144,042,565 - 44,070,922 (+)NCBI
PanPan1.1145,408,736 - 45,436,844 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003812802   ⟹   XP_003812850
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21182,040,600 - 182,062,348 (-)NCBI
NHGRI_mPanPan11181,182,021 - 181,203,799 (-)NCBI
Mhudiblu_PPA_v0144,049,166 - 44,070,899 (+)NCBI
PanPan1.1145,415,955 - 45,436,844 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008965272   ⟹   XP_008963520
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21182,040,600 - 182,075,678 (-)NCBI
NHGRI_mPanPan11181,182,021 - 181,210,466 (-)NCBI
Mhudiblu_PPA_v0144,042,565 - 44,070,334 (+)NCBI
PanPan1.1145,408,736 - 45,436,791 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034963499   ⟹   XP_034819390
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21182,040,600 - 182,075,651 (-)NCBI
NHGRI_mPanPan11181,182,021 - 181,210,463 (-)NCBI
Mhudiblu_PPA_v0144,042,805 - 44,070,899 (+)NCBI
RefSeq Acc Id: XM_055093872   ⟹   XP_054949847
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21182,040,600 - 182,062,352 (-)NCBI
NHGRI_mPanPan11181,182,021 - 181,203,810 (-)NCBI
RefSeq Acc Id: XP_003812849   ⟸   XM_003812801
- Peptide Label: isoform X1
- UniProtKB: A0A2R9CTM1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008963520   ⟸   XM_008965272
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_003812850   ⟸   XM_003812802
- Peptide Label: isoform X4
- UniProtKB: A0A2R9CP97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034819390   ⟸   XM_034963499
- Peptide Label: isoform X2
Ensembl Acc Id: ENSPPAP00000043178   ⟸   ENSPPAT00000066113
Ensembl Acc Id: ENSPPAP00000043177   ⟸   ENSPPAT00000066112
RefSeq Acc Id: XP_054949847   ⟸   XM_055093872
- Peptide Label: isoform X5
Protein Domains
Kinesin motor


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000044120 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000066112.1 UniProtKB/TrEMBL
  ENSPPAT00000066113.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.850.10 UniProtKB/TrEMBL
InterPro KIF2A-like_N UniProtKB/TrEMBL
  Kinesin-like_fam UniProtKB/TrEMBL
  Kinesin_motor_CS UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report pps:100971992 UniProtKB/TrEMBL
NCBI Gene KIF2C ENTREZGENE
PANTHER KINESIN-LIKE PROTEIN KIF2C UniProtKB/TrEMBL
  KINESIN-RELATED PROTEIN 6 UniProtKB/TrEMBL
Pfam KIF2A-like_1st UniProtKB/TrEMBL
  Kinesin UniProtKB/TrEMBL
PRINTS KINESINHEAVY UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_1 UniProtKB/TrEMBL
  KINESIN_MOTOR_2 UniProtKB/TrEMBL
SMART KISc UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A2R9CP97 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9CTM1 ENTREZGENE, UniProtKB/TrEMBL