ONTOLOGY REPORT - ANNOTATIONS
Term: endocrine system development
Accession: GO:0035270
browse the term
Definition: Progression of the endocrine system over time, from its formation to a mature structure. The endocrine system is a system of hormones and ductless glands, where the glands release hormones directly into the blood, lymph or other intercellular fluid, and the hormones circulate within the body to affect distant organs. The major glands that make up the human endocrine system are the hypothalamus, pituitary, thyroid, parathryoids, adrenals, pineal body, and the reproductive glands which include the ovaries and testes.
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Insm1
INSM transcriptional repressor 1
acts_upstream_of_or_within
ISO
MGI:3656035 (PMID:16951258)
RGD
PMID:16951258
NCBI chr 3:133,640,030...133,642,963
Ensembl chr 3:133,639,580...133,643,003
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Drd2
dopamine receptor D2
acts_upstream_of_or_within
ISO
MGI:3576789 (PMID:9140068)
RGD
PMID:9140068
NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875
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Ghrh
growth hormone releasing hormone
acts_upstream_of_or_within
TAS ISO
MGI:3051561 (PMID:15985453)
RGD
PMID:15985453 PMID:12511850
RGD:1601329
NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889
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Ghrhr
growth hormone releasing hormone receptor
acts_upstream_of_or_within
ISO
MGI:1856425 (PMID:1270792), (PMID:1329576), (PMID:1504465)
RGD
PMID:1270792 PMID:1329576 PMID:1504465
NCBI chr 4:84,498,159...84,532,851
Ensembl chr 4:84,500,212...84,532,776
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Gsx1
GS homeobox 1
acts_upstream_of_or_within
ISO
MGI:2154448 (PMID:8631293)
RGD
PMID:8631293
NCBI chr12:7,880,663...7,882,947
Ensembl chr12:7,881,460...7,882,753
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Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3808031 (PMID:18996108)
Ensembl RGD
PMID:18996108
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Pou1f1
POU class 1 homeobox 1
IMP
RGD
PMID:16216912
RGD:1601440
NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801
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Prop1
PROP paired-like homeobox 1
acts_upstream_of_or_within
ISO
(PMID:18996108)
RGD
PMID:18996108
NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434
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Slc6a3
solute carrier family 6 member 3
acts_upstream_of_or_within
ISO
MGI:2386303 (PMID:9247269)
RGD
PMID:9247269
NCBI chr 1:29,709,443...29,750,413
Ensembl chr 1:29,709,443...29,750,413
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Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
IEP ISO
MGI:2449045 (PMID:16932809)
RGD
PMID:16932809 PMID:21815952
RGD:8661681
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
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Duox2
dual oxidase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3712359 (PMID:17440044)
Ensembl RGD
PMID:17440044
GO_REF:0000107
NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902
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Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:12361965)
RGD
PMID:12361965
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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Insm1
INSM transcriptional repressor 1
involved_in
ISO
(PMID:18094025)
RGD
PMID:18094025
NCBI chr 3:133,640,030...133,642,963
Ensembl chr 3:133,639,580...133,643,003
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Armc5
armadillo repeat containing 5
acts_upstream_of_or_within
ISO
MGI:6157645 (PMID:28911199)
RGD
PMID:28911199
NCBI chr 1:182,820,141...182,826,913
Ensembl chr 1:182,820,141...182,826,907
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
involved_in
ISO
(PMID:17537799)
RGD
PMID:17537799
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
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Wt1
WT1 transcription factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:17537799)
UniProt RGD
PMID:17537799
GO_REF:0000024
NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
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Acvr2a
activin A receptor type 2A
IEP
RGD
PMID:12844345
RGD:728125
NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
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Acvr2b
activin A receptor type 2B
IEP
RGD
PMID:12844345
RGD:728125
NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
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Apoa1
apolipoprotein A1
acts_upstream_of_or_within
ISO
MGI:2180783 (PMID:8647961)
RGD
PMID:8647961
NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
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Arid5b
AT-rich interaction domain 5B
acts_upstream_of_or_within
ISO
MGI:2445941 (PMID:11483573)
RGD
PMID:11483573
NCBI chr20:20,307,731...20,490,746
Ensembl chr20:20,307,731...20,487,433
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Cdkn1c
cyclin-dependent kinase inhibitor 1C
acts_upstream_of_or_within
ISO
MGI:1933758|MGI:3840687 (PMID:19276117)
RGD
PMID:19276117
NCBI chr 1:198,655,394...198,658,097
Ensembl chr 1:198,655,407...198,658,048
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2179740 (PMID:11694877), (PMID:15615595)
RGD
PMID:11694877 PMID:15615595
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
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Crh
corticotropin releasing hormone
acts_upstream_of_or_within
ISO
MGI:1857392 (PMID:10861000)
RGD
PMID:10861000
NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
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Crhr1
corticotropin releasing hormone receptor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:9655498)
Ensembl RGD
PMID:9655498
GO_REF:0000107
NCBI chr10:89,040,186...89,083,481
Ensembl chr10:89,040,203...89,083,481
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Cyp11b3
cytochrome P450, family 11, subfamily b, polypeptide 3
IEP
RGD
PMID:7829497
RGD:1299585
NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
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Cyp17a1
cytochrome P450, family 17, subfamily a, polypeptide 1
IEP
RGD
PMID:17065412
RGD:4889133
NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573
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Cyp19a1
cytochrome P450, family 19, subfamily a, polypeptide 1
IEP
RGD
PMID:8097866
RGD:4145970
NCBI chr 8:54,552,978...54,580,375
Ensembl chr 8:54,553,165...54,580,758
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Cyp1b1
cytochrome P450, family 1, subfamily b, polypeptide 1
IEP
RGD
PMID:10098502
RGD:7829725
NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
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Dkk3
dickkopf WNT signaling pathway inhibitor 3
involved_in
ISO
(PMID:12844346)
RGD
PMID:12844346
NCBI chr 1:166,237,969...166,281,271
Ensembl chr 1:166,238,238...166,280,590
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Fdx1
ferredoxin 1
IEP
RGD
PMID:8097866
RGD:4145970
NCBI chr 8:52,268,536...52,287,344
Ensembl chr 8:52,268,536...52,287,414
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Fstl3
follistatin like 3
IEP
RGD
PMID:14692692
RGD:1302294
NCBI chr 7:9,923,574...9,929,223
Ensembl chr 7:9,923,576...9,939,639
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Hmga2
high mobility group AT-hook 2
acts_upstream_of_or_within
ISO
MGI:1858044 (PMID:7958830)
RGD
PMID:7958830
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
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Hsd3b1
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
IEP
RGD
PMID:1935797
RGD:4889583
NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
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Igf1r
insulin-like growth factor 1 receptor
involved_in
ISO
UniProtKB:P15208 (PMID:23300479)
RGD
PMID:23300479
NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777
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Insr
insulin receptor
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q60751 (PMID:23300479)
Ensembl RGD
PMID:23300479
GO_REF:0000107
NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
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Ly6e
lymphocyte antigen 6 family member E
acts_upstream_of_or_within
ISO
MGI:2429638 (PMID:11784869)
RGD
PMID:11784869
NCBI chr 7:106,935,530...106,939,689
Ensembl chr 7:106,935,761...106,939,689
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Mdk
midkine
involved_in
IDA
PMID:11136554
UniProt
PMID:11136554
RGD:62414
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
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Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:1857444 (PMID:16906226) GO_REF:0000107
HGNC-UCL RGD Ensembl
PMID:16906226
GO_REF:0000024 GO_REF:0000107
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
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Nr0b1
nuclear receptor subfamily 0, group B, member 1
involved_in acts_upstream_of_or_within
ISS ISO IBA IEA
GO_REF:0000024 MGI:1346833 (PMID:11796523) GO_REF:0000033 GO_REF:0000107 (PMID:7990953)
HGNC-UCL RGD GO_Central Ensembl
PMID:7990953 PMID:11796523
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr X:50,756,886...50,761,014
Ensembl chr X:50,756,886...50,761,011
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Nr3c1
nuclear receptor subfamily 3, group C, member 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857745 (PMID:7628695)
Ensembl RGD
PMID:7628695
GO_REF:0000107
NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
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Nr5a1
nuclear receptor subfamily 5, group A, member 1
acts_upstream_of_or_within
ISO
MGI:1352460|MGI:1857391|MGI:5292676 (PMID:11796523), (PMID:16176945), (PMID:21820362)
RGD
PMID:11796523 PMID:16176945 PMID:21820362
NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328
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Pbx1
PBX homeobox 1
acts_upstream_of_or_within
ISO
MGI:2155612 (PMID:14595835)
RGD
PMID:14595835
NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594
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Pdgfra
platelet derived growth factor receptor alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97531 (PMID:19056881)
Ensembl RGD
PMID:19056881
GO_REF:0000107
NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
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Pdgfrb
platelet derived growth factor receptor beta
acts_upstream_of_or_within
ISO
MGI:97530 (PMID:19056881)
RGD
PMID:19056881
NCBI chr18:54,499,962...54,538,840
Ensembl chr18:54,499,964...54,538,843
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Pnmt
phenylethanolamine-N-methyltransferase
IEP
RGD
PMID:16140489
RGD:5130728
NCBI chr10:83,383,019...83,386,557
Ensembl chr10:83,384,923...83,386,556
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Sall1
spalt-like transcription factor 1
involved_in
ISO
(PMID:12065233)
RGD
PMID:12065233
NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
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Smad2
SMAD family member 2
IDA
RGD
PMID:12844345
RGD:728125
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
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Smad3
SMAD family member 3
IDA
RGD
PMID:12844345
RGD:728125
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
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Smad4
SMAD family member 4
IEP
RGD
PMID:12844345
RGD:728125
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
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Stra6
signaling receptor and transporter of retinol STRA6
involved_in
ISO IEA
(PMID:17273977) GO_REF:0000107
RGD Ensembl
PMID:17273977
GO_REF:0000107
NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
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Thra
thyroid hormone receptor alpha
IEP
RGD
PMID:17496154
RGD:2314319
NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
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Thra_v1
thyroid hormone receptor alpha, variant 1
IEP
RGD
PMID:17496154
RGD:2314319
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Thra_v2
thyroid hormone receptor alpha, variant 2
IEP
RGD
PMID:17496154
RGD:2314319
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Tspo
translocator protein
IEP
RGD
PMID:9927316
RGD:2317174
NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
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Wnt11
Wnt family member 11
involved_in
ISO
(PMID:9757009)
RGD
PMID:9757009
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
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Wnt4
Wnt family member 4
involved_in
ISO IEA
(PMID:12844346) GO_REF:0000107
RGD Ensembl
PMID:12844346
GO_REF:0000107
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
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Wt1
WT1 transcription factor
involved_in
ISO IEA ISS
UniProtKB:P22561 (PMID:10101119) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:10101119
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
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Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:9463347)
Ensembl RGD
PMID:9463347
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
(PMID:9463347)
RGD
PMID:9463347
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
(PMID:9463347)
RGD
PMID:9463347
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
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Anxa1
annexin A1
IEP
RGD
PMID:7527053
RGD:2306957
NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
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Bak1
BCL2-antagonist/killer 1
IEP
RGD
PMID:11000281
RGD:2315710
NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
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Clu
clusterin
IMP
RGD
PMID:16411126
RGD:1582421
NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
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Eif2ak3
eukaryotic translation initiation factor 2 alpha kinase 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:12086964)
UniProt RGD
PMID:12086964
GO_REF:0000024
NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
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Foxa2
forkhead box A2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2177337|MGI:2664968 (PMID:15680365) (PMID:12124776)
Ensembl RGD
PMID:12124776 PMID:15680365
GO_REF:0000107
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
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Gip
gastric inhibitory polypeptide
acts_upstream_of_or_within
ISO
(PMID:21270265)
RGD
PMID:21270265
NCBI chr10:80,968,360...80,976,506
Ensembl chr10:80,968,352...80,976,503
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Gipr
gastric inhibitory polypeptide receptor
acts_upstream_of_or_within
ISO
(PMID:21270265)
RGD
PMID:21270265
NCBI chr 1:78,804,287...78,814,462
Ensembl chr 1:78,805,593...78,814,462
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Hnf1b
HNF1 homeobox B
involved_in
ISO ISS
(PMID:16801329) PMID:1677179
RGD
PMID:16801329 PMID:1677179
RGD:8554679
NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
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Il6
interleukin 6
involved_in
ISO
(PMID:18719127)
RGD
PMID:18719127
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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Il6r
interleukin 6 receptor
involved_in
ISO IEA
(PMID:18719127) GO_REF:0000107
RGD Ensembl
PMID:18719127
GO_REF:0000107
NCBI chr 2:175,289,157...175,347,719
Ensembl chr 2:175,298,686...175,347,536
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Insm1
INSM transcriptional repressor 1
acts_upstream_of_or_within
ISO
(PMID:16511571)
RGD
PMID:16511571
NCBI chr 3:133,640,030...133,642,963
Ensembl chr 3:133,639,580...133,643,003
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Mnx1
motor neuron and pancreas homeobox 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2182358 (PMID:10471501)
GO_Central RGD
PMID:10471501
GO_REF:0000033
NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
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Myt1
myelin transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:17928203)
RGD
PMID:17928203
NCBI chr 3:168,890,466...168,950,341
Ensembl chr 3:168,886,089...168,950,341
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Neurod1
neuronal differentiation 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:10639171), (PMID:9308961)
UniProt RGD
PMID:9308961 PMID:10639171
GO_REF:0000024
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (PMID:9584121)
RGD
PMID:9584121
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
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Nkx6-1
NK6 homeobox 1
acts_upstream_of_or_within
ISO
MGI:1352738|MGI:2386119 (PMID:15944193)
RGD
PMID:15944193
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
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Nkx6-2
NK6 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1206039 (PMID:15944193)
RGD
PMID:15944193
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
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Onecut1
one cut homeobox 1
acts_upstream_of_or_within
ISO
MGI:1891408 (PMID:17400205)
RGD
PMID:17400205
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
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Onecut2
one cut homeobox 2
acts_upstream_of_or_within
ISO
MGI:1196423 (PMID:17400205)
RGD
PMID:17400205
NCBI chr18:57,831,647...57,890,884
Ensembl chr18:57,832,111...57,879,629
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Pde3b
phosphodiesterase 3B
acts_upstream_of_or_within
ISO
(PMID:14736883)
RGD
PMID:14736883
NCBI chr 1:168,606,762...168,770,078
Ensembl chr 1:168,607,022...168,769,334
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Pdx1
pancreatic and duodenal homeobox 1
acts_upstream_of_or_within
ISO
MGI:2181360 (PMID:18155690)
RGD
PMID:18155690
NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
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Rfx3
regulatory factor X3
involved_in
ISO
(PMID:17229940)
RGD
PMID:17229940
NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
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Rfx6
regulatory factor X, 6
involved_in
ISO
(PMID:20148032)
RGD
PMID:20148032
NCBI chr20:31,019,784...31,073,266
Ensembl chr20:31,019,829...31,073,147
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Sox4
SRY-box transcription factor 4
acts_upstream_of_or_within
ISO
MGI:2182092 (PMID:16306355)
RGD
PMID:16306355
NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2385469 (PMID:18723011)
RGD
PMID:18723011
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Zfp800
zinc finger protein 800
acts_upstream_of_or_within
ISO
MGI:6716236 (PMID:33653874)
RGD
PMID:33653874
NCBI chr 4:56,798,326...56,849,766
Ensembl chr 4:56,826,997...56,849,791
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Prop1
PROP paired-like homeobox 1
acts_upstream_of_or_within
ISO
MGI:3690463 (PMID:16678101)
RGD
PMID:16678101
NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434
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Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857617 (PMID:15037319)
Ensembl RGD
PMID:15037319
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2149672 (PMID:10615124)
Ensembl RGD
PMID:10615124
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Mir7-1
microRNA 7-1
acts_upstream_of_or_within
ISO
(PMID:22764048)
RGD
PMID:22764048
NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
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Mir1
microRNA 1
IDA
RGD
PMID:21816899
RGD:10059418
NCBI chr18:1,887,537...1,887,623
G
Mir28
microRNA 28
IDA
RGD
PMID:21816899
RGD:10059418
NCBI chr11:75,975,523...75,975,608
Ensembl chr11:75,975,523...75,975,608
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Mir290
microRNA 290
IDA
RGD
PMID:21816899
RGD:10059418
NCBI chr 1:65,964,648...65,964,728
Ensembl chr 1:65,964,648...65,964,728
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Mir296
microRNA 296
IDA
RGD
PMID:21816899
RGD:10059418
NCBI chr 3:163,051,838...163,051,915
Ensembl chr 3:163,051,838...163,051,915
G
Mir297
microRNA 297
IDA
RGD
PMID:21816899
RGD:10059418
NCBI chr10:98,216,479...98,216,544
G
Rap1gap
Rap1 GTPase-activating protein
IMP
RGD
PMID:17646383
RGD:9835038
NCBI chr 5:149,873,987...149,939,254
Ensembl chr 5:149,892,019...149,939,253
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Cftr
CF transmembrane conductance regulator
IMP
RGD
PMID:23178930
RGD:11567224
NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
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Otp
orthopedia homeobox
acts_upstream_of_or_within
ISO
MGI:2180541 (PMID:10557207)
RGD
PMID:10557207
NCBI chr 2:26,108,158...26,116,359
Ensembl chr 2:26,108,163...26,116,359
G
Pou3f2
POU class 3 homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857996 (PMID:8543156)
Ensembl RGD
PMID:8543156
GO_REF:0000107
NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
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Pax6
paired box 6
involved_in
IMP ISO IEA
PMID:20592023 (PMID:20592023) GO_REF:0000107
RGD Ensembl
PMID:20592023 PMID:20592023
GO_REF:0000107, RGD:8552352
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16887115)
Ensembl RGD
PMID:16887115
GO_REF:0000107
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:2149672 (PMID:10615124)
Ensembl RGD
PMID:10615124
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Insm1
INSM transcriptional repressor 1
acts_upstream_of_or_within involved_in
ISO
(PMID:16511571)
RGD
PMID:16511571
NCBI chr 3:133,640,030...133,642,963
Ensembl chr 3:133,639,580...133,643,003
G
Nkx6-1
NK6 homeobox 1
acts_upstream_of_or_within
ISO
MGI:1352738 (PMID:15944193)
RGD
PMID:15944193
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
G
Nkx6-2
NK6 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1206039 (PMID:15944193)
RGD
PMID:15944193
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
G
Onecut1
one cut homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179340 (PMID:10825208)
Ensembl RGD
PMID:10825208
GO_REF:0000107
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
G
Pax6
paired box 6
IMP
RGD
PMID:20592023
RGD:8552352
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Rfx6
regulatory factor X, 6
involved_in
ISO
(PMID:20148032)
RGD
PMID:20148032
NCBI chr20:31,019,784...31,073,266
Ensembl chr20:31,019,829...31,073,147
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Vhl
von Hippel-Lindau tumor suppressor
acts_upstream_of_or_within
ISO
MGI:2136645|MGI:3608931 (PMID:25186293)
RGD
PMID:25186293
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
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Neurod1
neuronal differentiation 1
acts_upstream_of_or_within
ISO
MGI:97347 (PMID:17988662)
RGD
PMID:17988662
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1339708|MGI:1932100 (PMID:17202186), (PMID:17988662)
RGD
PMID:17202186 PMID:17988662
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Onecut1
one cut homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179340 (PMID:10825208)
Ensembl RGD
PMID:10825208
GO_REF:0000107
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
G
Rfx6
regulatory factor X, 6
involved_in
ISO
(PMID:20148032)
RGD
PMID:20148032
NCBI chr20:31,019,784...31,073,266
Ensembl chr20:31,019,829...31,073,147
G
Rfx6
regulatory factor X, 6
involved_in
ISO
(PMID:20148032)
RGD
PMID:20148032
NCBI chr20:31,019,784...31,073,266
Ensembl chr20:31,019,829...31,073,147
G
Neurod1
neuronal differentiation 1
acts_upstream_of_or_within
ISO
MGI:97347 (PMID:17988662)
RGD
PMID:17988662
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1339708 (PMID:17988662)
RGD
PMID:17988662
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Crkl
CRK like proto-oncogene, adaptor protein
acts_upstream_of_or_within
ISO
MGI:98493 (PMID:16399080)
RGD
PMID:16399080
NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
G
Foxi3
forkhead box I3
involved_in
ISO
(PMID:31412026)
RGD
PMID:31412026
NCBI chr 4:102,933,487...102,937,655
Ensembl chr 4:102,933,409...102,937,655
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
MGI:2181201 (PMID:20484821)
RGD
PMID:20484821
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
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Gcm2
glial cells missing transcription factor 2
involved_in acts_upstream_of_or_within
ISO
(PMID:15728199), (PMID:27745835) MGI:1889069 (PMID:19968565)
RGD
PMID:15728199 PMID:19968565 PMID:27745835
NCBI chr17:23,652,637...23,661,754
Ensembl chr17:23,652,637...23,661,754
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Hoxa3
homeobox A3
acts_upstream_of_or_within
ISO
MGI:97485 (PMID:11476574)
RGD
PMID:11476574
NCBI chr 4:81,269,243...81,313,218
Ensembl chr 4:81,269,243...81,313,218
G
Pax1
paired box 1
acts_upstream_of_or_within
ISO
MGI:96175 (PMID:11476574)
RGD
PMID:11476574
NCBI chr 3:134,792,330...134,801,637
Ensembl chr 3:134,789,182...134,801,636
G
Tbx1
T-box transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:31412026) (PMID:14585638)
UniProt RGD
PMID:14585638 PMID:31412026
GO_REF:0000024
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
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Tgfbr1
transforming growth factor, beta receptor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386570|MGI:2388050 (PMID:17078885)
Ensembl RGD
PMID:17078885
GO_REF:0000107
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Adcyap1
adenylate cyclase activating polypeptide 1
IEP
RGD
PMID:18160680
RGD:2325274
NCBI chr 9:113,102,632...113,122,500
Ensembl chr 9:113,103,718...113,109,773
G
Aldh1a2
aldehyde dehydrogenase 1 family, member A2
IEP
RGD
PMID:17180597
RGD:2306413
NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
G
Aldh1a3
aldehyde dehydrogenase 1 family, member A3
IEP
RGD
PMID:17180597
RGD:2306413
NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
G
Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857137 (PMID:9806931)
Ensembl RGD
PMID:9806931
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
MGI:2158342|MGI:2158390 (PMID:17359964)
RGD
PMID:17359964
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Cdh1
cadherin 1
IEP
RGD
PMID:17373711
RGD:2289637
NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
G
Creb1
cAMP responsive element binding protein 1
acts_upstream_of_or_within
ISO
MGI:2176173|MGI:2181395 (PMID:16141355)
RGD
PMID:16141355
NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
G
Ets1
ETS proto-oncogene 1, transcription factor
IEP
RGD
PMID:8946059
RGD:2313681
NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647 (PMID:11062007)
RGD
PMID:11062007
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
MGI:2179995|MGI:3628639 (PMID:16543408)
RGD
PMID:16543408
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Gli1
GLI family zinc finger 1
acts_upstream_of_or_within
ISO
MGI:95728 (PMID:10725236)
RGD
PMID:10725236
NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:95727 (PMID:10725236)
RGD
PMID:10725236
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
G
Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:104876|MGI:2149672 (PMID:17015435), (PMID:17426285)
RGD
PMID:17015435 PMID:17426285
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Hesx1
HESX homeobox 1
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:26781211) MGI:102764|MGI:1931124|MGI:3822474|MGI:3822475 (PMID:11731482), (PMID:18775421), (PMID:19093031), (PMID:20181723), (PMID:9620767) GO_REF:0000033
RGD GO_Central
PMID:9620767 PMID:11731482 PMID:18775421 PMID:19093031 PMID:20181723 PMID:26781211 More...
GO_REF:0000033
NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957
G
Hmga2
high mobility group AT-hook 2
acts_upstream_of_or_within
ISO
MGI:1856426 (PMID:504232)
RGD
PMID:504232
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
G
Inhbb
inhibin subunit beta B
IEP
RGD
PMID:18160680
RGD:2325274
NCBI chr13:30,530,860...30,536,566
Ensembl chr13:30,530,860...30,537,832
G
Isl1
ISL LIM homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2182246 (PMID:9806931)
Ensembl RGD
PMID:9806931
GO_REF:0000107
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Kdm1a
lysine demethylase 1A
acts_upstream_of_or_within
ISO
MGI:3711561 (PMID:17392792)
RGD
PMID:17392792
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Lhx3
LIM homeobox 3
acts_upstream_of_or_within
ISO
MGI:2385819 (PMID:18037398)
RGD
PMID:18037398
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
G
Msx1
msh homeobox 1
IEP
RGD
PMID:16451220
RGD:5132608
NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966
G
Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857494 (PMID:9806931)
Ensembl RGD
PMID:9806931
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
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Nog
noggin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1862000 (PMID:17359964)
Ensembl RGD
PMID:17359964
GO_REF:0000107
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856155|MGI:1934347 (PMID:10588713)
Ensembl RGD
PMID:10588713
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Pcsk1
proprotein convertase subtilisin/kexin type 1
IEP
RGD
PMID:15208361
RGD:2308902
NCBI chr 2:4,395,543...4,442,434
Ensembl chr 2:4,395,543...4,442,434
G
Pitx1
paired-like homeodomain 1
acts_upstream_of_or_within
ISO
MGI:1934200 (PMID:10049363)
RGD
PMID:10049363
NCBI chr17:8,794,134...8,800,292
Ensembl chr17:8,794,134...8,800,291
G
Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:1857844|MGI:1857846|MGI:2384494 (PMID:10498698), (PMID:10499586)
RGD
PMID:10498698 PMID:10499586
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
G
Pou1f1
POU class 1 homeobox 1
acts_upstream_of_or_within
ISO
MGI:1856024 (PMID:16556738)
RGD
PMID:16556738
NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801
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Prop1
PROP paired-like homeobox 1
acts_upstream_of_or_within
ISO
MGI:1856842 (PMID:11731482)
RGD
PMID:11731482
NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:3583755 (PMID:17015435)
RGD
PMID:17015435
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Sall1
spalt-like transcription factor 1
involved_in
ISO
(PMID:12065233)
RGD
PMID:12065233
NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
G
Six3
SIX homeobox 3
acts_upstream_of_or_within involved_in
ISO
MGI:96071 (PMID:18775421)
RGD
PMID:18775421
NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
G
Sox2
SRY-box transcription factor 2
involved_in
ISO
(PMID:18285410)
RGD
PMID:18285410
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Sox3
SRY-box transcription factor 3
involved_in
ISO
(PMID:14981518)
RGD
PMID:14981518
NCBI chr X:139,308,608...139,310,687
Ensembl chr X:139,309,329...139,310,678
G
Srd5a1
steroid 5 alpha-reductase 1
IEP
RGD
PMID:8770891
RGD:4892048
NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
G
Tbx19
T-box transcription factor 19
acts_upstream_of_or_within
ISO
(PMID:11447259)
RGD
PMID:11447259
NCBI chr13:77,450,848...77,484,475
Ensembl chr13:77,450,849...77,504,163
G
Tcf7l2
transcription factor 7 like 2
acts_upstream_of_or_within
ISO
MGI:1926344 (PMID:17919533)
RGD
PMID:17919533
NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
G
Bad
BCL2-associated agonist of cell death
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:18223655) GO_REF:0000107
UniProt RGD Ensembl
PMID:18223655
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
G
Rfx3
regulatory factor X3
involved_in
ISO
(PMID:20413507)
RGD
PMID:20413507
NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
G
Lhx3
LIM homeobox 3
acts_upstream_of_or_within
ISO
MGI:2385819 (PMID:8638120)
RGD
PMID:8638120
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
G
Bmal1
basic helix-loop-helix ARNT like 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:20562852)
UniProt RGD
PMID:20562852
GO_REF:0000024
NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
G
Clock
clock circadian regulator
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:20562852) GO_REF:0000107
UniProt RGD Ensembl
PMID:20562852
GO_REF:0000024 GO_REF:0000107
NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
G
Rheb
Ras homolog, mTORC1 binding
involved_in
ISO IEA
(PMID:19258434) GO_REF:0000107
RGD Ensembl
PMID:19258434
GO_REF:0000107
NCBI chr 4:10,278,970...10,320,160
Ensembl chr 4:10,279,370...10,320,160
G
Ghrhr
growth hormone releasing hormone receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856425 (PMID:6116352), (PMID:6194978)
Ensembl RGD
PMID:6116352 PMID:6194978
GO_REF:0000107
NCBI chr 4:84,498,159...84,532,851
Ensembl chr 4:84,500,212...84,532,776
G
Pou1f1
POU class 1 homeobox 1
acts_upstream_of_or_within
ISO
MGI:2158737 (PMID:17015435)
RGD
PMID:17015435
NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801
G
Lhx3
LIM homeobox 3
acts_upstream_of_or_within
ISO
MGI:2385819 (PMID:8638120)
RGD
PMID:8638120
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
G
Pou1f1
POU class 1 homeobox 1
acts_upstream_of_or_within
ISO
MGI:1856024 (PMID:1334535), (PMID:6194978)
RGD
PMID:1334535 PMID:6194978
NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801
G
Prop1
PROP paired-like homeobox 1
acts_upstream_of_or_within
ISO
MGI:1856842 (PMID:6194978)
RGD
PMID:6194978
NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434
G
Wnt4
Wnt family member 4
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1857453 (PMID:18351662) GO_REF:0000107
RGD Ensembl
PMID:18351662
GO_REF:0000107
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
G
Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:97847 (PMID:18952847)
RGD
PMID:18952847
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
G
Cga
glycoprotein hormones, alpha polypeptide
acts_upstream_of_or_within
ISO
MGI:1857152 (PMID:12114718)
RGD
PMID:12114718
NCBI chr 5:49,486,915...49,499,192
Ensembl chr 5:49,487,068...49,499,191
G
Ctns
cystinosin, lysosomal cystine transporter
IMP
RGD
PMID:35695380
RGD:155630629
NCBI chr10:57,801,551...57,817,213
Ensembl chr10:57,801,456...57,817,120
G
Duox2
dual oxidase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3712359 (PMID:17440044)
Ensembl RGD
PMID:17440044
GO_REF:0000107
NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637 (PMID:26506449)
RGD
PMID:26506449
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:4867385 (PMID:26506449)
Ensembl RGD
PMID:26506449
GO_REF:0000107
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647 (PMID:11062007)
RGD
PMID:11062007
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:2150347|MGI:3757964|MGI:98493 (PMID:19389367)
RGD
PMID:19389367
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Foxe1
forkhead box E1
involved_in acts_upstream_of_or_within
ISO
(PMID:15494458), (PMID:9697705) MGI:2181780 (PMID:9697704)
RGD
PMID:9697704 PMID:9697705 PMID:15494458
NCBI chr 5:60,630,027...60,632,835
Ensembl chr 5:60,630,027...60,632,835
G
Hesx1
HESX homeobox 1
acts_upstream_of_or_within
ISO
MGI:102764 (PMID:18775421)
RGD
PMID:18775421
NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957
G
Hhex
hematopoietically expressed homeobox
acts_upstream_of_or_within
ISO
MGI:2177762 (PMID:10804184), (PMID:15581879)
RGD
PMID:10804184 PMID:15581879
NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
G
Hipk2
homeodomain interacting protein kinase 2
acts_upstream_of_or_within
ISO
MGI:96160 (PMID:31582725)
RGD
PMID:31582725
NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
G
Hmga1
high mobility group AT-hook 1
acts_upstream_of_or_within
ISO
MGI:1314872 (PMID:31582725)
RGD
PMID:31582725
NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752
G
Hoxa3
homeobox A3
acts_upstream_of_or_within
ISO
MGI:1857992|MGI:96184|MGI:96207 (PMID:7635047), (PMID:9520319), (PMID:9524238)
RGD
PMID:7635047 PMID:9520319 PMID:9524238
NCBI chr 4:81,269,243...81,313,218
Ensembl chr 4:81,269,243...81,313,218
G
Hoxa5
homeo box A5
acts_upstream_of_or_within
ISO
MGI:2150397 (PMID:12815622)
RGD
PMID:12815622
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
G
Hoxb3
homeo box B3
acts_upstream_of_or_within
ISO
MGI:96175 (PMID:9520319)
RGD
PMID:9520319
NCBI chr10:81,258,739...81,314,134
Ensembl chr10:81,299,357...81,313,107
G
Hoxd3
homeo box D3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:96175 (PMID:9520319)
Ensembl RGD
PMID:9520319
GO_REF:0000107
NCBI chr 3:59,638,708...59,650,282
Ensembl chr 3:59,638,708...59,650,282
G
Map2k1
mitogen activated protein kinase kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346867 (PMID:18952847)
Ensembl RGD
PMID:18952847
GO_REF:0000107
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
G
Map2k2
mitogen activated protein kinase kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346866 (PMID:18952847)
Ensembl RGD
PMID:18952847
GO_REF:0000107
NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
G
Mapk1
mitogen activated protein kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346859 (PMID:18952847)
Ensembl RGD
PMID:18952847
GO_REF:0000107
NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (PMID:18952847)
RGD
PMID:18952847
NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
G
Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:11854319), (PMID:15494458) MGI:1857494|MGI:3653644|MGI:3653645|MGI:97492 (PMID:15581879), (PMID:16150900), (PMID:16601074) GO_REF:0000107
RGD Ensembl
PMID:11854319 PMID:15494458 PMID:15581879 PMID:16150900 PMID:16601074
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Nkx2-5
NK2 homeobox 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:16418214)
Ensembl RGD
PMID:16418214
GO_REF:0000107
NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
G
Pax8
paired box 8
involved_in acts_upstream_of_or_within
ISO ISS
(PMID:1337742), (PMID:15494458), (PMID:9590296) (PMID:1723950) MGI:2156985|MGI:98742 (PMID:11773436), (PMID:9590297) GO_REF:0000024
RGD UniProt
PMID:1337742 PMID:1723950 PMID:9590296 PMID:9590297 PMID:11773436 PMID:15494458 More...
GO_REF:0000024
NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
G
Raf1
Raf-1 proto-oncogene, serine/threonine kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:88190 (PMID:18952847)
Ensembl RGD
PMID:18952847
GO_REF:0000107
NCBI chr 4:148,679,534...148,740,265
Ensembl chr 4:148,679,530...148,740,317
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861186 (PMID:16968815)
Ensembl RGD
PMID:16968815
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Six1
SIX homeobox 1
acts_upstream_of_or_within
ISO
MGI:2655195 (PMID:16530750)
RGD
PMID:16530750
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
G
Six3
SIX homeobox 3
acts_upstream_of_or_within
ISO
MGI:96071 (PMID:18775421)
RGD
PMID:18775421
NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
G
Smad3
SMAD family member 3
acts_upstream_of_or_within
ISO
MGI:108051 (PMID:15183723)
RGD
PMID:15183723
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
G
Srf
serum response factor
acts_upstream_of_or_within
ISO
MGI:3522206 (PMID:18952847)
RGD
PMID:18952847
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179136|MGI:2179191|MGI:99604 (PMID:15190012), (PMID:17164259), (PMID:19389367)
UniProt RGD
PMID:15190012 PMID:17164259 PMID:19389367
GO_REF:0000024
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Tg
thyroglobulin
involved_in
ISO IEA
(PMID:15494458) GO_REF:0000107
RGD Ensembl
PMID:15494458
GO_REF:0000107
NCBI chr 7:98,418,293...98,603,210
Ensembl chr 7:98,418,293...98,603,210
G
Tgfb2
transforming growth factor, beta 2
IEP
RGD
PMID:18554691
RGD:2302084
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Thra
thyroid hormone receptor alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97492 (PMID:11773436)
Ensembl RGD
PMID:11773436
GO_REF:0000107
NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
G
Tubb1
tubulin, beta 1 class VI
involved_in
ISO
(PMID:30446499)
RGD
PMID:30446499
NCBI chr 3:163,247,990...163,257,460
Ensembl chr 3:163,247,967...163,256,063
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:9463347)
Ensembl RGD
PMID:9463347
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
(PMID:9463347)
RGD
PMID:9463347
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
(PMID:9463347)
RGD
PMID:9463347
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
MGI:2179995|MGI:3628639 (PMID:16543408)
RGD
PMID:16543408
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Lhx3
LIM homeobox 3
acts_upstream_of_or_within
ISO
MGI:2385819 (PMID:8638120)
RGD
PMID:8638120
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
G
Wnt4
Wnt family member 4
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1857453 (PMID:18351662) GO_REF:0000107
RGD Ensembl
PMID:18351662
GO_REF:0000107
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO IEA ISS
(PMID:11865031) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:11865031
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp5
bone morphogenetic protein 5
involved_in
ISO
(PMID:11865031)
RGD
PMID:11865031
NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
G
Bmp6
bone morphogenetic protein 6
involved_in
ISO
(PMID:11865031)
RGD
PMID:11865031
NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365
G
Cdh2
cadherin 2
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:26750727) GO_REF:0000024
Ensembl RGD UniProt
PMID:26750727
GO_REF:0000024 GO_REF:0000107
NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
G
Cdk6
cyclin-dependent kinase 6
involved_in
ISO
(PMID:20668294)
RGD
PMID:20668294
NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
G
Dll1
delta like canonical Notch ligand 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:22529374) GO_REF:0000024
Ensembl RGD UniProt
PMID:22529374
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Insm1
INSM transcriptional repressor 1
acts_upstream_of_or_within
ISO
MGI:3656035 (PMID:16951258)
RGD
PMID:16951258
NCBI chr 3:133,640,030...133,642,963
Ensembl chr 3:133,639,580...133,643,003
G
Mir214
microRNA 214
acts_upstream_of_or_within
ISO
(PMID:17804764)
RGD
PMID:17804764
NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
G
Mir375
microRNA 375
acts_upstream_of_or_within
ISO
(PMID:17804764)
RGD
PMID:17804764
NCBI chr 9:76,457,911...76,457,985
Ensembl chr 9:76,457,911...76,457,985
G
Mir503
microRNA 503
acts_upstream_of_or_within
ISO
(PMID:17804764)
RGD
PMID:17804764
NCBI chr X:132,806,303...132,806,373
Ensembl chr X:132,806,303...132,806,373
G
Mir541
microRNA 541
acts_upstream_of_or_within
ISO
(PMID:17804764)
RGD
PMID:17804764
NCBI chr 6:128,757,016...128,757,105
Ensembl chr 6:128,757,016...128,757,105
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (PMID:17202186), (PMID:17456846)
RGD
PMID:17202186 PMID:17456846
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Nkx6-1
NK6 homeobox 1
IEP
RGD
PMID:9603781
RGD:2326025
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
G
Pdpk1
3-phosphoinositide dependent protein kinase-1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19635472)
Ensembl RGD
PMID:19635472
GO_REF:0000107
NCBI chr10:13,105,435...13,182,664
Ensembl chr10:13,105,498...13,174,623
G
Sidt2
SID1 transmembrane family, member 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5532825 (PMID:23776622)
Ensembl RGD
PMID:23776622
GO_REF:0000107
NCBI chr 8:46,232,379...46,248,913
Ensembl chr 8:46,232,383...46,248,700
G
Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176256|MGI:2684317 (PMID:20185815)
Ensembl RGD
PMID:20185815
GO_REF:0000107
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857617 (PMID:16246260)
Ensembl RGD
PMID:16246260
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16887115)
Ensembl RGD
PMID:16887115
GO_REF:0000107
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
G
Insm1
INSM transcriptional repressor 1
acts_upstream_of_or_within involved_in
ISO
(PMID:16511571)
RGD
PMID:16511571
NCBI chr 3:133,640,030...133,642,963
Ensembl chr 3:133,639,580...133,643,003
G
Men1
menin 1
IMP
RGD
PMID:24157940
RGD:9589069
NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
G
Mir7-1
microRNA 7-1
acts_upstream_of_or_within
ISO
(PMID:22764048)
RGD
PMID:22764048
NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of
ISO
MGI:1932100 (PMID:14729487)
RGD
PMID:14729487
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Nkx6-1
NK6 homeobox 1
acts_upstream_of_or_within
ISO
MGI:2386119 (PMID:15944193)
RGD
PMID:15944193
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
G
Onecut1
one cut homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179340 (PMID:10825208)
Ensembl RGD
PMID:10825208
GO_REF:0000107
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
G
Pax4
paired box 4
acts_upstream_of involved_in
ISO IBA
MGI:2182122 (PMID:14729487) GO_REF:0000033
RGD GO_Central
PMID:14729487
GO_REF:0000033
NCBI chr 4:57,058,453...57,065,995
Ensembl chr 4:57,058,462...57,063,408
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IMP IBA ISO IEA
GO_REF:0000033 MGI:1934347 (PMID:22764048) GO_REF:0000107
GO_Central RGD Ensembl
PMID:22764048 PMID:22403172
GO_REF:0000033 GO_REF:0000107, RGD:8552355
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Pdx1
pancreatic and duodenal homeobox 1
involved_in acts_upstream_of_or_within
IMP ISO IBA
PMID:21108535 MGI:2181362 (PMID:16418487) GO_REF:0000033 (PMID:12124776), (PMID:24567802)
RGD GO_Central
PMID:12124776 PMID:16418487 PMID:24567802 PMID:21108535
GO_REF:0000033, RGD:8553608
NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
G
Reg1a
regenerating family member 1 alpha
involved_in
ISO
MGI:2446480 (PMID:16405968)
RGD
PMID:16405968
NCBI chr 4:110,892,451...110,895,115
Ensembl chr 4:110,892,453...110,895,570
G
Rfx6
regulatory factor X, 6
involved_in
ISO
(PMID:20148032)
RGD
PMID:20148032
NCBI chr20:31,019,784...31,073,266
Ensembl chr20:31,019,829...31,073,147
G
Vhl
von Hippel-Lindau tumor suppressor
acts_upstream_of_or_within
ISO
MGI:2136645|MGI:3608931 (PMID:25186293)
RGD
PMID:25186293
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (PMID:17202186), (PMID:17988662)
RGD
PMID:17202186 PMID:17988662
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Bhlha15
basic helix-loop-helix family, member a15
acts_upstream_of_or_within
ISO
MGI:2182768 (PMID:16423820)
RGD
PMID:16423820
NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
G
Gdf11
growth differentiation factor 11
acts_upstream_of_or_within
ISO
MGI:2449672 (PMID:15548585)
RGD
PMID:15548585
NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
G
Rfx3
regulatory factor X3
involved_in
ISO
(PMID:20413507)
RGD
PMID:20413507
NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all