Gene: Pdx1 (pancreatic and duodenal homeobox 1) Rattus norvegicus
Symbol: Pdx1
Name: pancreatic and duodenal homeobox 1
Description: ENCODES a protein that exhibits DNA binding transcription factor activity; promoter-specific chromatin binding; protein complex binding; INVOLVED IN animal organ regeneration; animal organ senescence; cell differentiation; PARTICIPATES IN forkhead class A signaling pathway; maturity onset diabetes of the young pathway; type 2 diabetes mellitus pathway; ASSOCIATED WITH Diabetes Mellitus, Experimental; Diabetes Mellitus, Type 2; Fetal Growth Retardation; FOUND IN cytoplasm; nucleus; intracellular (ortholog); INTERACTS WITH 17beta-estradiol; 9-cis-retinoic acid; aldehydo-D-glucose
Type: protein-coding
Also known as: IDX-1; Idx1; Insulin promoter factor 1; insulin promotor factor 1; IPF-1; Ipf1; islet/duodenum homeobox 1; islet/duodenum homeobox-1; pancreas/duodenum homeobox protein 1; pancreatic and duodenal homeobox gene 1; somatostatin transactivating factor 1; somatostatin-transactivating factor 1; STF-1; Stf1
Homo sapiens (human) : PDX1 (pancreatic and duodenal homeobox 1)  HGNC  AGR
Mus musculus (house mouse) : Pdx1 (pancreatic and duodenal homeobox 1)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Pdx1 (pancreatic and duodenal homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PDX1 (pancreatic and duodenal homeobox 1)
Canis lupus familiaris (dog) : PDX1 (pancreatic and duodenal homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdx1 (pancreatic and duodenal homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0129,496,044 - 9,501,211 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01211,609,488 - 11,614,655 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera129,495,501 - 9,500,668 (-)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
More on Pdx1
AGR Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 62387
Created: 2001-04-26
Species: Rattus norvegicus
Last Modified: 2017-10-31
Status: ACTIVE