ONTOLOGY REPORT - ANNOTATIONS
Term: sprouting angiogenesis
Accession: GO:0002040
browse the term
Definition: The extension of new blood vessels from existing vessels into avascular tissues, this process includes the specialization of endothelial cells into leading tip and stalk cells, proliferation and migration of the endothelial cells and cell adhesion resulting in angiogenic sprout fusion or lumen formation.
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Adgra2
adhesion G protein-coupled receptor A2
involved_in acts_upstream_of_or_within
ISO IBA
(MGI:4839817|PMID:21071672) MGI:5544776 (PMID:23918385) GO_REF:0000033
RGD GO_Central
PMID:21071672 PMID:23918385
GO_REF:0000033 MGI:4839817
NCBI chr16:64,932,964...64,971,433
Ensembl chr16:64,933,315...64,971,483
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Angpt1
angiopoietin 1
involved_in
ISO IEA
(PMID:10218485), (PMID:9560344) GO_REF:0000107
RGD Ensembl
PMID:9560344 PMID:10218485
GO_REF:0000107
NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
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Cdc42
cell division cycle 42
IMP
RGD
PMID:18562481
RGD:5688290
NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
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Cdh13
cadherin 13
involved_in
ISO
(PMID:16873731)
RGD
PMID:16873731
NCBI chr19:46,349,562...47,387,462
Ensembl chr19:46,349,430...47,387,459
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Clec14a
C-type lectin domain containing 14A
acts_upstream_of_or_within
ISO
MGI:6404416 (PMID:27991863)
RGD
PMID:27991863
NCBI chr 6:75,881,470...75,884,612
Ensembl chr 6:75,881,473...75,884,612
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E2f7
E2F transcription factor 7
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5447251|PMID:22903062) (PMID:22903062)
UniProt Ensembl RGD
PMID:22903062
GO_REF:0000024 GO_REF:0000107 MGI:5447251
NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734
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E2f8
E2F transcription factor 8
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5447251|PMID:22903062) GO_REF:0000107 (PMID:22903062)
UniProt RGD Ensembl
PMID:22903062
GO_REF:0000024 GO_REF:0000107 MGI:5447251
NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098
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Eng
endoglin
NOT|involved_in
ISO
(MGI:4368063|PMID:19703439)
RGD
PMID:19703439
MGI:4368063
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
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Esm1
endothelial cell-specific molecule 1
involved_in
ISO
(PMID:20616313)
RGD
PMID:20616313
NCBI chr 2:44,876,067...44,884,805
Ensembl chr 2:44,876,067...44,884,804
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Flt1
Fms related receptor tyrosine kinase 1
acts_upstream_of_or_within
ISO
MGI:1857717 (PMID:19758562)
RGD
PMID:19758562
NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
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Flt4
Fms related receptor tyrosine kinase 4
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:3805424|PMID:18594512) GO_REF:0000107
UniProt RGD Ensembl
PMID:18594512
GO_REF:0000024 GO_REF:0000107 MGI:3805424
NCBI chr10:33,913,725...33,954,770
Ensembl chr10:33,913,608...33,954,770
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Flvcr2
FLVCR choline and putative heme transporter 2
acts_upstream_of_or_within
ISO
(PMID:32369453)
RGD
PMID:32369453
NCBI chr 6:105,408,355...105,472,355
Ensembl chr 6:105,408,339...105,472,353
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Jmjd6
jumonji domain containing 6, arginine demethylase and lysine hydroxylase
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:4940413|PMID:21300889)
UniProt Ensembl RGD
PMID:21300889
GO_REF:0000024 GO_REF:0000107 MGI:4940413
NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182
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Lef1
lymphoid enhancer binding factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1926601 (PMID:19154719)
Ensembl RGD
PMID:19154719
GO_REF:0000107
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
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Loxl2
lysyl oxidase-like 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:21835952)
UniProt Ensembl RGD
PMID:21835952
GO_REF:0000024 GO_REF:0000107
NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
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Naxe
NAD(P)HX epimerase
involved_in
ISO ISS
ZFIN:ZDB-MRPHLNO-130813-3 (PMID:23719382) GO_REF:0000024
RGD UniProt
PMID:23719382
GO_REF:0000024
NCBI chr 2:173,518,971...173,521,036
Ensembl chr 2:173,518,971...173,521,040
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Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:1933835|MGI:2450311 (PMID:15809373)
RGD
PMID:15809373
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Nrarp
Notch-regulated ankyrin repeat protein
acts_upstream_of_or_within
ISO
MGI:3833551 (PMID:19154719)
RGD
PMID:19154719
NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133
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Nrp1
neuropilin 1
involved_in
ISO IBA
(MGI:5562961|PMID:24401374) GO_REF:0000033
RGD GO_Central
PMID:24401374
GO_REF:0000033 MGI:5562961
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Otulin
OTU deubiquitinase with linear linkage specificity
involved_in
ISO
(MGI:5494328|PMID:23708998)
RGD
PMID:23708998
MGI:5494328
NCBI chr 2:78,290,437...78,316,633
Ensembl chr 2:78,290,959...78,316,422
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Parva
parvin, alpha
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:4368016|PMID:19798050) GO_REF:0000107
UniProt RGD Ensembl
PMID:19798050
GO_REF:0000024 GO_REF:0000107 MGI:4368016
NCBI chr 1:166,547,142...166,704,958
Ensembl chr 1:166,547,132...166,704,950
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Pgf
placental growth factor
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:21408222
GO_REF:0000033, RGD:6483775
NCBI chr 6:104,816,102...104,826,685
Ensembl chr 6:104,816,104...104,826,685
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Ptk2b
protein tyrosine kinase 2 beta
involved_in
ISS ISO
GO_REF:0000024 (MGI:5056252|PMID:21640103)
UniProt RGD
PMID:21640103
GO_REF:0000024 MGI:5056252
NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
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Ramp2
receptor activity modifying protein 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:3772552|PMID:18097473)
UniProt RGD
PMID:18097473
GO_REF:0000024 MGI:3772552
NCBI chr10:86,187,366...86,190,692
Ensembl chr10:86,188,812...86,231,829
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Reck
reversion-inducing-cysteine-rich protein with kazal motifs
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:58,102,961...58,169,516
Ensembl chr 5:58,102,981...58,169,502
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Rnf213
ring finger protein 213
involved_in
ISO IBA
(PMID:26766444) GO_REF:0000033
RGD GO_Central
PMID:26766444
GO_REF:0000033
NCBI chr10:104,656,329...104,755,669
Ensembl chr10:104,656,883...104,757,918
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Rspo3
R-spondin 3
involved_in
ISO
(MGI:5751613|PMID:26766444)
RGD
PMID:26766444
MGI:5751613
NCBI chr 1:28,283,914...28,368,661
Ensembl chr 1:28,283,914...28,367,061
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Sema3e
semaphorin 3E
involved_in
ISO
(MGI:4819325|PMID:20385769)
RGD
PMID:20385769
MGI:4819325
NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
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Tek
TEK receptor tyrosine kinase
involved_in
ISO
(PMID:14665640)
RGD
PMID:14665640
NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
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Tgfb1
transforming growth factor, beta 1
acts_upstream_of
ISO
(PMID:31368162)
RGD
PMID:31368162
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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Thbs1
thrombospondin 1
involved_in
ISO
(PMID:17879962)
RGD
PMID:17879962
NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
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Tmem215
transmembrane protein 215
acts_upstream_of_or_within
ISO
(PMID:30370660)
RGD
PMID:30370660
NCBI chr 5:55,612,568...55,615,828
Ensembl chr 5:55,612,568...55,615,828
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Vegfa
vascular endothelial growth factor A
involved_in
ISO IBA
(MGI:5562961|PMID:24401374) GO_REF:0000033
RGD GO_Central
PMID:24401374
GO_REF:0000033 MGI:5562961
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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Vegfb
vascular endothelial growth factor B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
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Vegfc
vascular endothelial growth factor C
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:37,712,251...37,827,845
Ensembl chr16:37,712,262...37,827,848
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Vegfd
vascular endothelial growth factor D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:30,073,122...30,108,413
Ensembl chr X:30,074,163...30,108,295
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Vstm4
V-set and transmembrane domain containing 4
acts_upstream_of_or_within
ISO
(PMID:31698979)
RGD
PMID:31698979
NCBI chr16:8,120,336...8,200,272
Ensembl chr16:8,120,336...8,200,269
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Bmp4
bone morphogenetic protein 4
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:18787191)
UniProt Ensembl RGD
PMID:18787191
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Bmper
BMP-binding endothelial regulator
involved_in
ISO
(PMID:18787191)
RGD
PMID:18787191
NCBI chr 8:21,732,225...21,977,261
Ensembl chr 8:21,732,225...21,977,256
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Epha2
Eph receptor A2
acts_upstream_of_or_within
ISO
MGI:3040415 (PMID:19443703)
RGD
PMID:19443703
NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
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Itgb1bp1
integrin subunit beta 1 binding protein 1
involved_in
ISO
(PMID:20616313)
RGD
PMID:20616313
NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
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Nrarp
Notch-regulated ankyrin repeat protein
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3833551 (PMID:19154719)
GO_Central RGD
PMID:19154719
GO_REF:0000033
NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133
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Sema5a
semaphorin 5A
involved_in
ISS ISO
GO_REF:0000024 (MGI:5526935|PMID:19850054)
UniProt RGD
PMID:19850054
GO_REF:0000024 MGI:5526935
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
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Rtn4
reticulon 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:15034570)
UniProt RGD
PMID:15034570
GO_REF:0000024
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
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Adtrp
androgen-dependent TFPI-regulating protein
involved_in
ISO
(PMID:28341552)
RGD
PMID:28341552
NCBI chr17:22,907,758...22,993,834
Ensembl chr17:22,930,740...22,993,826
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Akt1
AKT serine/threonine kinase 1
involved_in
ISO IEA
(PMID:28341552) GO_REF:0000107
RGD Ensembl
PMID:28341552
GO_REF:0000107
NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
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Clec14a
C-type lectin domain containing 14A
involved_in
ISO
MGI:5292853 (PMID:25745997)
RGD
PMID:25745997
NCBI chr 6:75,881,470...75,884,612
Ensembl chr 6:75,881,473...75,884,612
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Cripto
cripto, EGF-CFC family member
involved_in
ISO
(PMID:17720976)
RGD
PMID:17720976
NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
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Efnb2
ephrin B2
involved_in
ISO
(PMID:12734395)
RGD
PMID:12734395
NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
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Egr3
early growth response 3
involved_in
ISO IEA
(PMID:18059339) GO_REF:0000107
RGD Ensembl
PMID:18059339
GO_REF:0000107
NCBI chr15:45,150,335...45,156,052
Ensembl chr15:45,150,567...45,154,627
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Ephb4
EPH receptor B4
involved_in
ISO
(PMID:12734395)
RGD
PMID:12734395
NCBI chr12:19,326,411...19,351,667
Ensembl chr12:19,326,427...19,351,314
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Fgf2
fibroblast growth factor 2
involved_in
ISO
UniProtKB:Q9UQL6 (PMID:18059339), (PMID:19351956)
RGD
PMID:18059339 PMID:19351956
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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Gpld1
glycosylphosphatidylinositol specific phospholipase D1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:17720976)
UniProt Ensembl RGD
PMID:17720976
GO_REF:0000024 GO_REF:0000107
NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939
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Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(MGI:3834346|PMID:17077323), (MGI:4845816|PMID:20660291)
RGD
PMID:17077323 PMID:20660291
MGI:3834346 MGI:4845816
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
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Itgb1
integrin subunit beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16424942)
Ensembl RGD
PMID:16424942
GO_REF:0000107
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
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Kdr
kinase insert domain receptor
involved_in
ISO IEA
(MGI:4845816|PMID:20660291) GO_REF:0000107
RGD Ensembl
PMID:20660291
GO_REF:0000107 MGI:4845816
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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Mia3
MIA SH3 domain ER export factor 3
involved_in
ISO
(PMID:28341552)
RGD
PMID:28341552
NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
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Mmrn2
multimerin 2
involved_in
ISO
(PMID:25745997)
RGD
PMID:25745997
NCBI chr16:9,705,925...9,727,405
Ensembl chr16:9,705,892...9,727,405
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Nr4a1
nuclear receptor subfamily 4, group A, member 1
involved_in
ISO
(PMID:18059339)
RGD
PMID:18059339
NCBI chr 7:132,368,399...132,389,300
Ensembl chr 7:132,374,840...132,389,297
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Nrp1
neuropilin 1
involved_in
ISO
(MGI:5484470|PMID:23315162)
RGD
PMID:23315162
MGI:5484470
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Pik3r3
phosphoinositide-3-kinase regulatory subunit 3
involved_in
ISO IEA
UniProtKB:P31749|UniProtKB:Q96IZ2 (PMID:28341552) GO_REF:0000107
RGD Ensembl
PMID:28341552
GO_REF:0000107
NCBI chr 5:129,700,925...129,772,591
Ensembl chr 5:129,701,229...129,772,583
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Robo1
roundabout guidance receptor 1
involved_in
ISO
UniProtKB:Q9UQL6 (PMID:19351956)
RGD
PMID:19351956
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
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Slit2
slit guidance ligand 2
involved_in
ISO IEA
(PMID:19351956) GO_REF:0000107
RGD Ensembl
PMID:19351956
GO_REF:0000107
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Srf
serum response factor
involved_in acts_upstream_of_or_within
ISO
(PMID:15180964) (PMID:18804439)
RGD
PMID:15180964 PMID:18804439
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
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Vegfa
vascular endothelial growth factor A
involved_in
IEA ISO
GO_REF:0000107 (PMID:20660291)
Ensembl RGD
PMID:20660291
GO_REF:0000107
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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Dll1
delta like canonical Notch ligand 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5466218|PMID:22282195) GO_REF:0000024
Ensembl RGD UniProt
PMID:22282195
GO_REF:0000024 GO_REF:0000107 MGI:5466218
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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Flvcr2
FLVCR choline and putative heme transporter 2
acts_upstream_of_or_within
ISO
(PMID:32369453)
RGD
PMID:32369453
NCBI chr 6:105,408,355...105,472,355
Ensembl chr 6:105,408,339...105,472,353
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Dll4
delta like canonical Notch ligand 4
involved_in
ISO IEA
(PMID:23388056) GO_REF:0000107
RGD Ensembl
PMID:23388056
GO_REF:0000107
NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
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Il12a
interleukin 12A
acts_upstream_of involved_in
ISO IEA
UniProtKB:P29460 (PMID:30106099) GO_REF:0000107
RGD Ensembl
PMID:30106099
GO_REF:0000107
NCBI chr 2:152,965,769...152,973,035
Ensembl chr 2:152,965,769...152,972,734
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Il12b
interleukin 12B
acts_upstream_of
ISO
UniProtKB:P29459 (PMID:30106099)
RGD
PMID:30106099
NCBI chr10:28,888,832...28,903,802
Ensembl chr10:28,893,008...28,902,903
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Mir15b
microRNA 15b
involved_in
ISO
(PMID:27208409)
RGD
PMID:27208409
NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297
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Mir16
microRNA 16
involved_in
ISO
(PMID:21885851), (PMID:27748453)
RGD
PMID:21885851 PMID:27748453
NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443
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Mir193a
microRNA 193a
involved_in
ISO
(PMID:28276476)
RGD
PMID:28276476
NCBI chr10:64,672,343...64,672,454
Ensembl chr10:64,672,343...64,672,454
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Mir222
microRNA 222
involved_in
ISO
(PMID:20489169)
RGD
PMID:20489169
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
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Mir24-2
microRNA 24-2
involved_in
ISO
(PMID:21788589)
RGD
PMID:21788589
NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790
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Mir26a
microRNA 26a
involved_in
ISO
(PMID:25613580), (PMID:28602162)
RGD
PMID:25613580 PMID:28602162
NCBI chr 8:118,755,289...118,755,378
Ensembl chr 8:118,755,289...118,755,378
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Mir322
microRNA 322
involved_in
ISO
(PMID:21885851)
RGD
PMID:21885851
NCBI chr X:132,806,594...132,806,688
Ensembl chr X:132,806,594...132,806,688
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Mir342
microRNA 342
involved_in
ISO
(PMID:26857067)
RGD
PMID:26857067
NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
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Mir361
microRNA 361
involved_in
ISO
(PMID:24865854)
RGD
PMID:24865854
NCBI chr X:78,246,206...78,246,275
Ensembl chr X:78,246,206...78,246,275
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Mir410
microRNA 410
involved_in
ISO
(PMID:28122380)
RGD
PMID:28122380
NCBI chr 6:128,758,358...128,758,433
Ensembl chr 6:128,758,354...128,758,434
G
Mir494
microRNA 494
involved_in
ISO
(PMID:28124060)
RGD
PMID:28124060
NCBI chr 6:128,728,710...128,728,792
Ensembl chr 6:128,728,709...128,728,793
G
Mir497
microRNA 497
involved_in
ISO
(PMID:28122380)
RGD
PMID:28122380
NCBI chr10:54,951,514...54,951,582
Ensembl chr10:54,951,505...54,951,584
G
Mir503
microRNA 503
involved_in
ISO
(PMID:21220732)
RGD
PMID:21220732
NCBI chr X:132,806,303...132,806,373
Ensembl chr X:132,806,303...132,806,373
G
Mmrn2
multimerin 2
involved_in
ISO
(PMID:25745997) (MGI:5780028|PMID:25745997)
RGD
PMID:25745997
MGI:5780028
NCBI chr16:9,705,925...9,727,405
Ensembl chr16:9,705,892...9,727,405
G
Ngfr
nerve growth factor receptor
involved_in
ISO IEA
RNAcentral:URS00000F6E49_9606 (PMID:26268439) GO_REF:0000107
RGD Ensembl
PMID:26268439
GO_REF:0000107
NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
G
Pdcd10
programmed cell death 10
involved_in
ISO IEA
(PMID:23388056) GO_REF:0000107
RGD Ensembl
PMID:23388056
GO_REF:0000107
NCBI chr 2:160,303,465...160,346,086
Ensembl chr 2:160,303,449...160,346,018
G
Thbs1
thrombospondin 1
involved_in
ISO
(PMID:25660232)
RGD
PMID:25660232
NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
G
Sema6a
semaphorin 6A
involved_in
ISO
RNAcentral:URS000059311D_9606 (PMID:24177325)
RGD
PMID:24177325
NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
G
Card10
caspase recruitment domain family, member 10
involved_in
ISO
(PMID:24863965)
RGD
PMID:24863965
NCBI chr 7:110,330,460...110,371,551
Ensembl chr 7:110,330,408...110,359,224
G
Dll4
delta like canonical Notch ligand 4
involved_in
ISO IEA
(PMID:20616313), (PMID:23388056) GO_REF:0000107
RGD Ensembl
PMID:20616313 PMID:23388056
GO_REF:0000107
NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
G
Hdac5
histone deacetylase 5
involved_in
ISO
(PMID:19351956)
RGD
PMID:19351956
NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
G
Itgb1bp1
integrin subunit beta 1 binding protein 1
involved_in
ISO
(PMID:20616313)
RGD
PMID:20616313
NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
G
Klf4
KLF transcription factor 4
involved_in
ISO
(PMID:20551324)
RGD
PMID:20551324
NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
G
Map2k5
mitogen activated protein kinase kinase 5
involved_in
IMP
PMID:20551324
BHF-UCL
PMID:20551324
RGD:8553940
NCBI chr 8:63,625,220...63,852,090
Ensembl chr 8:63,625,221...63,851,983
G
Meox2
mesenchyme homeobox 2
involved_in
ISO IEA
RNAcentral:URS0000170CF4_9606 (PMID:20516212) GO_REF:0000107
RGD Ensembl
PMID:20516212
GO_REF:0000107
NCBI chr 6:53,856,760...53,917,467
Ensembl chr 6:53,856,758...53,917,467
G
Mir146a
microRNA 146a
involved_in
ISO
(PMID:28727754)
RGD
PMID:28727754
NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
G
Mir16
microRNA 16
involved_in acts_upstream_of
ISO
(PMID:27748453) (PMID:23083510)
RGD
PMID:23083510 PMID:27748453
NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443
G
Mir188
microRNA 188
involved_in
ISO
UniProtKB:Q99759 (PMID:28640956)
RGD
PMID:28640956
NCBI chr X:15,247,715...15,247,794
Ensembl chr X:15,247,715...15,247,794
G
Mir193a
microRNA 193a
involved_in
ISO
(PMID:28276476)
RGD
PMID:28276476
NCBI chr10:64,672,343...64,672,454
Ensembl chr10:64,672,343...64,672,454
G
Mir196a
microRNA 196a
involved_in
ISO
(PMID:22773844)
RGD
PMID:22773844
NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509
G
Mir196c
microRNA 196c
involved_in
ISO
(PMID:22773844)
RGD
PMID:22773844
NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085
G
Mir199a2
microRNA 199a-2
acts_upstream_of
ISO
(PMID:28358369)
RGD
PMID:28358369
NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063
G
Mir19b1
microRNA 19b-1
involved_in
ISO
(PMID:22197821)
RGD
PMID:22197821
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
G
Mir19b2
microRNA 19b-2
involved_in
ISO
(PMID:22197821)
RGD
PMID:22197821
NCBI chr X:132,422,072...132,422,167
Ensembl chr X:132,422,072...132,422,167
G
Mir200c
microRNA 200c
acts_upstream_of
ISO
(PMID:24205206)
RGD
PMID:24205206
NCBI chr 4:157,523,679...157,523,747
G
Mir205
microRNA 205
acts_upstream_of
ISO
(PMID:23800974)
RGD
PMID:23800974
NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985
G
Mir206
microRNA 206
involved_in
ISO
(PMID:26175229)
RGD
PMID:26175229
NCBI chr 9:23,094,249...23,094,332
Ensembl chr 9:23,094,249...23,094,332
G
Mir20a
microRNA 20a
involved_in
ISO
(PMID:22696064)
RGD
PMID:22696064
NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
G
Mir22
microRNA 22
involved_in
ISO
(PMID:25323119)
RGD
PMID:25323119
NCBI chr10:60,307,039...60,307,133
Ensembl chr10:60,307,039...60,307,133
G
Mir221
microRNA 221
involved_in
ISO
UniProtKB:P50222 (PMID:20516212)
RGD
PMID:20516212
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Mir26a
microRNA 26a
involved_in
ISO
(PMID:24047927), (PMID:25613580), (PMID:28602162)
RGD
PMID:24047927 PMID:25613580 PMID:28602162
NCBI chr 8:118,755,289...118,755,378
Ensembl chr 8:118,755,289...118,755,378
G
Mir322
microRNA 322
involved_in
ISO
RNAcentral:URS00000F6E49_9606 (PMID:28566713)
RGD
PMID:28566713
NCBI chr X:132,806,594...132,806,688
Ensembl chr X:132,806,594...132,806,688
G
Mir361
microRNA 361
involved_in
ISO
(PMID:24865854)
RGD
PMID:24865854
NCBI chr X:78,246,206...78,246,275
Ensembl chr X:78,246,206...78,246,275
G
Mir410
microRNA 410
involved_in
ISO
(PMID:28122380)
RGD
PMID:28122380
NCBI chr 6:128,758,358...128,758,433
Ensembl chr 6:128,758,354...128,758,434
G
Mir494
microRNA 494
involved_in
ISO
(PMID:28124060)
RGD
PMID:28124060
NCBI chr 6:128,728,710...128,728,792
Ensembl chr 6:128,728,709...128,728,793
G
Mir497
microRNA 497
involved_in
ISO
(PMID:28122380)
RGD
PMID:28122380
NCBI chr10:54,951,514...54,951,582
Ensembl chr10:54,951,505...54,951,584
G
Mir503
microRNA 503
involved_in
ISO
RNAcentral:URS00000F0F49_9606 (PMID:28566713)
RGD
PMID:28566713
NCBI chr X:132,806,303...132,806,373
Ensembl chr X:132,806,303...132,806,373
G
Mirlet7a1
microRNA let-7a-1
acts_upstream_of
ISO
(PMID:30467960)
RGD
PMID:30467960
NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867
G
Mirlet7c2
microRNA let7c-2
acts_upstream_of
ISO
(PMID:30467960)
RGD
PMID:30467960
NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865
G
Mmrn2
multimerin 2
involved_in
ISO IBA
(PMID:22020326) GO_REF:0000033
RGD GO_Central
PMID:22020326
GO_REF:0000033
NCBI chr16:9,705,925...9,727,405
Ensembl chr16:9,705,892...9,727,405
G
Notch1
notch receptor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:20616313)
UniProt RGD
PMID:20616313
GO_REF:0000024
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Pdcd10
programmed cell death 10
involved_in
ISO IEA
(PMID:23388056) GO_REF:0000107
RGD Ensembl
PMID:23388056
GO_REF:0000107
NCBI chr 2:160,303,465...160,346,086
Ensembl chr 2:160,303,449...160,346,018
G
Pik3r2
phosphoinositide-3-kinase regulatory subunit 2
involved_in
IMP
PMID:25652288
BHF-UCL
PMID:25652288
RGD:11053232
NCBI chr16:18,665,517...18,674,067
Ensembl chr16:18,665,457...18,674,065
G
Rhoa
ras homolog family member A
acts_upstream_of_or_within involved_in
ISO IEA
UniProtKB:Q9Y3M8 (PMID:20208559) GO_REF:0000107
RGD Ensembl
PMID:20208559
GO_REF:0000107
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
G
Spred1
sprouty-related, EVH1 domain containing 1
involved_in
ISO
(MGI:3809388|PMID:18694565)
RGD
PMID:18694565
MGI:3809388
NCBI chr 3:103,983,120...104,050,321
Ensembl chr 3:103,983,072...104,049,718
G
Stard13
StAR-related lipid transfer domain containing 13
acts_upstream_of_or_within
ISO
UniProtKB:P61586 (PMID:20208559)
RGD
PMID:20208559
NCBI chr12:566,282...959,372
Ensembl chr12:566,310...959,421
G
Tbxa2r
thromboxane A2 receptor
involved_in
ISO
RNAcentral:URS00005416E3_9606 (PMID:24558106)
RGD
PMID:24558106
NCBI chr 7:8,383,347...8,390,753
Ensembl chr 7:8,383,378...8,388,176
G
Thbs1
thrombospondin 1
involved_in
ISO
(PMID:25660232)
RGD
PMID:25660232
NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
G
Adamts9
ADAM metallopeptidase with thrombospondin type 1 motif, 9
involved_in
ISO
(MGI:4418720|PMID:20093484)
RGD
PMID:20093484
MGI:4418720
NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
G
Alox5
arachidonate 5-lipoxygenase
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:4948186|PMID:21307302) GO_REF:0000107
UniProt RGD Ensembl
PMID:21307302
GO_REF:0000024 GO_REF:0000107 MGI:4948186
NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
G
Creb3l1
cAMP responsive element binding protein 3-like 1
involved_in
ISO IEA
RNAcentral:URS000050B527_9606 (PMID:27121396) GO_REF:0000107
RGD Ensembl
PMID:27121396
GO_REF:0000107
NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456
G
E2f2
E2F transcription factor 2
involved_in
ISO
RNAcentral:URS0000338542_9606 (PMID:27731397)
RGD
PMID:27731397
NCBI chr 5:148,399,193...148,422,595
Ensembl chr 5:148,399,642...148,421,217
G
Epn1
Epsin 1
involved_in
ISO IEA
UniProtKB:O95208 (PMID:28717225) GO_REF:0000107
RGD Ensembl
PMID:28717225
GO_REF:0000107
NCBI chr 1:68,742,491...68,760,570
Ensembl chr 1:68,742,789...68,758,874
G
Epn2
epsin 2
involved_in
ISO IEA
(PMID:28717225) GO_REF:0000107
RGD Ensembl
PMID:28717225
GO_REF:0000107
NCBI chr10:46,197,785...46,259,673
Ensembl chr10:46,197,785...46,259,642
G
Flt1
Fms related receptor tyrosine kinase 1
IDA
RGD
PMID:23804076
RGD:10402115
NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
G
Klf2
KLF transcription factor 2
involved_in
ISO
(PMID:26299712)
RGD
PMID:26299712
NCBI chr16:17,521,107...17,523,739
Ensembl chr16:17,514,552...17,523,944
G
Mir138-1
microRNA 138-1
involved_in
ISO
(PMID:24244340)
RGD
PMID:24244340
NCBI chr 8:122,300,966...122,301,064
Ensembl chr 8:122,300,966...122,301,064
G
Mir138-2
microRNA 138-2
involved_in
ISO
(PMID:24244340)
RGD
PMID:24244340
NCBI chr19:10,674,193...10,674,274
Ensembl chr19:10,674,193...10,674,274
G
Mir17
microRNA 17
involved_in
ISO
(PMID:20299512)
RGD
PMID:20299512
NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
G
Mir18a
microRNA 18a
involved_in
ISO
(PMID:20299512)
RGD
PMID:20299512
NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860
G
Mir19a
microRNA 19a
involved_in
ISO
(PMID:20299512)
RGD
PMID:20299512
NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
G
Mir20a
microRNA 20a
involved_in
ISO
(PMID:20299512)
RGD
PMID:20299512
NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
G
Mir221
microRNA 221
involved_in
ISO
UniProtKB:P23769 (PMID:27780851)
RGD
PMID:27780851
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Mir30c1
microRNA 30c-1
acts_upstream_of
ISO
(PMID:27780851)
RGD
PMID:27780851
NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
G
Mir30c2
microRNA 30c-2
acts_upstream_of
ISO
(PMID:27780851)
RGD
PMID:27780851
NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
G
Mir30e
microRNA 30e
involved_in
ISO
(PMID:27780851)
RGD
PMID:27780851
NCBI chr 5:134,352,232...134,352,323
Ensembl chr 5:134,352,232...134,352,323
G
Mir34a
microRNA 34a
involved_in
ISO
(PMID:23426265)
RGD
PMID:23426265
NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
G
Mir375
microRNA 375
involved_in
ISO
UniProtKB:O15530 (PMID:26235810)
RGD
PMID:26235810
NCBI chr 9:76,457,911...76,457,985
Ensembl chr 9:76,457,911...76,457,985
G
Mir377
microRNA 377
involved_in
ISO
(PMID:25251394)
RGD
PMID:25251394
NCBI chr 6:128,755,051...128,755,122
G
Mir92a1
microRNA 92a-1
involved_in
ISO
(PMID:19460962)
RGD
PMID:19460962
NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413
G
Mir92a2
microRNA 92a-2
involved_in
ISO
(PMID:19460962)
RGD
PMID:19460962
NCBI chr X:132,421,942...132,422,033
Ensembl chr X:132,421,942...132,422,033
G
Pik3cb
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
involved_in
ISO
(PMID:30496354)
RGD
PMID:30496354
NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663
G
Sema6a
semaphorin 6A
involved_in
ISO
(PMID:22184411)
RGD
PMID:22184411
NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
G
Sh2b3
SH2B adaptor protein 3
IMP
RGD
PMID:25628389
RGD:12904914
NCBI chr12:34,731,934...34,753,617
Ensembl chr12:34,731,911...34,753,616
G
Stard13
StAR-related lipid transfer domain containing 13
acts_upstream_of_or_within
ISO
MGI:4363733 (PMID:20208559)
RGD
PMID:20208559
NCBI chr12:566,282...959,372
Ensembl chr12:566,310...959,421
G
Synj2bp
synaptojanin 2 binding protein
involved_in
ISO ISS
(PMID:24025447) GO_REF:0000024
RGD UniProt
PMID:24025447
GO_REF:0000024
NCBI chr 6:101,189,714...101,227,400
Ensembl chr 6:101,189,714...101,227,406
G
Thbs1
thrombospondin 1
involved_in
ISO
RNAcentral:URS00001D69F6_9606 (PMID:28124060)
RGD
PMID:28124060
NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
G
Zfp354c
zinc finger protein 354C
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:33154469) GO_REF:0000024
Ensembl RGD UniProt
PMID:33154469
GO_REF:0000024 GO_REF:0000107
NCBI chr10:35,129,720...35,145,717
Ensembl chr10:35,132,959...35,145,661
G
Agtr1a
angiotensin II receptor, type 1a
involved_in
ISO
RNAcentral:URS0000338542_9606 (PMID:25850724)
RGD
PMID:25850724
NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
G
Apela
apelin receptor early endogenous ligand
involved_in
ISO ISS
(MGI:5914956|PMID:28890073) GO_REF:0000024
RGD UniProt
PMID:28890073
GO_REF:0000024 MGI:5914956
NCBI chr16:24,694,356...24,703,466
Ensembl chr16:24,694,324...24,703,465
G
Aplnr
apelin receptor
involved_in
ISS ISO
GO_REF:0000024 (MGI:5914956|PMID:28890073)
UniProt RGD
PMID:28890073
GO_REF:0000024 MGI:5914956
NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
G
Fgfbp1
fibroblast growth factor binding protein 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:27121396)
Ensembl RGD
PMID:27121396
GO_REF:0000107
NCBI chr14:67,103,686...67,107,492
Ensembl chr14:67,104,545...67,107,496
G
Gata2
GATA binding protein 2
involved_in
ISO
(PMID:27780851)
RGD
PMID:27780851
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Hmox1
heme oxygenase 1
involved_in
ISO IEA
RNAcentral:URS00001230A0_9606 (PMID:24844779) GO_REF:0000107
RGD Ensembl
PMID:24844779
GO_REF:0000107
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
G
Jcad
junctional cadherin 5 associated
involved_in
ISO IBA
(PMID:28705794) GO_REF:0000033
RGD GO_Central
PMID:28705794
GO_REF:0000033
NCBI chr17:53,089,382...53,130,996
Ensembl chr17:53,089,382...53,130,967
G
Mir101-2
microRNA 101-2
involved_in
ISO
(PMID:24844779)
RGD
PMID:24844779
NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467
G
Mir101a
microRNA 101a
involved_in
ISO
(PMID:24844779)
RGD
PMID:24844779
NCBI chr 5:115,966,332...115,966,406
Ensembl chr 5:115,966,328...115,966,410
G
Mir10a
microRNA 10a
involved_in
ISO
RNAcentral:URS000058760A_9606 (PMID:22955733)
RGD
PMID:22955733
NCBI chr10:81,283,171...81,283,280
Ensembl chr10:81,283,171...81,283,280
G
Mir10b
microRNA 10b
involved_in
ISO
RNAcentral:URS000016D2D4_9606 (PMID:22955733)
RGD
PMID:22955733
NCBI chr 3:59,628,438...59,628,546
Ensembl chr 3:59,628,438...59,628,546
G
Mir126a
microRNA 126a
involved_in
ISO
(PMID:28065883), (PMID:28124060)
RGD
PMID:28065883 PMID:28124060
NCBI chr 3:9,415,063...9,415,180
Ensembl chr 3:9,415,063...9,415,180
G
Mir132
microRNA 132
involved_in
ISO
(PMID:28065883)
RGD
PMID:28065883
NCBI chr10:60,023,696...60,023,796
Ensembl chr10:60,023,696...60,023,796
G
Mir146a
microRNA 146a
involved_in
ISO
(PMID:27121396)
RGD
PMID:27121396
NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
G
Mir21
microRNA 21
acts_upstream_of
ISO
(PMID:30106099)
RGD
PMID:30106099
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir23a
microRNA 23a
involved_in
ISO
RNAcentral:URS0000183BED_9606 (PMID:21536891)
RGD
PMID:21536891
NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
G
Mir27a
microRNA 27a
involved_in
ISO
RNAcentral:URS000059311D_9606 (PMID:21536891)
RGD
PMID:21536891
NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917
G
Mir27b
microRNA 27b
involved_in
ISO
RNAcentral:URS00003B95DA_9606 (PMID:21536891), (PMID:22184411)
RGD
PMID:21536891 PMID:22184411
NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
G
Mir487b
microRNA 487b
involved_in
ISO
(PMID:25660232)
RGD
PMID:25660232
NCBI chr 6:128,741,485...128,741,566
Ensembl chr 6:128,741,485...128,741,566
G
Mir503
microRNA 503
involved_in
ISO
UniProtKB:P08138 (PMID:26268439)
RGD
PMID:26268439
NCBI chr X:132,806,303...132,806,373
Ensembl chr X:132,806,303...132,806,373
G
Mirlet7b
microRNA let-7b
acts_upstream_of
ISO
(PMID:28159509)
RGD
PMID:28159509
NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
G
Ppp1r16b
protein phosphatase 1, regulatory subunit 16B
involved_in
ISO
(PMID:25007873)
RGD
PMID:25007873
NCBI chr 3:147,323,652...147,419,658
Ensembl chr 3:147,324,126...147,418,937
G
Vegfa
vascular endothelial growth factor A
involved_in acts_upstream_of
ISO IEA
RNAcentral:URS00001230A0_9606 (PMID:24844779) GO_REF:0000107 (PMID:30106099)
RGD Ensembl
PMID:24844779 PMID:30106099
GO_REF:0000107
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Mir27b
microRNA 27b
involved_in
ISO
(PMID:24177325)
RGD
PMID:24177325
NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
G
Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
involved_in
ISO
(MGI:5588737|PMID:24863063)
RGD
PMID:24863063
MGI:5588737
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
G
Akt3
AKT serine/threonine kinase 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:25323119)
Ensembl RGD
PMID:25323119
GO_REF:0000107
NCBI chr13:88,943,708...89,225,831
Ensembl chr13:88,946,091...89,225,708
G
Anxa1
annexin A1
involved_in
ISO IEA
(PMID:22773844) GO_REF:0000107
RGD Ensembl
PMID:22773844
GO_REF:0000107
NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
G
Cib1
calcium and integrin binding 1
involved_in
ISO IEA ISS
(MGI:3818804|PMID:17975111) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:17975111
GO_REF:0000024 GO_REF:0000107 MGI:3818804
NCBI chr 1:134,178,331...134,183,895
Ensembl chr 1:134,178,331...134,213,423
G
Fgf2
fibroblast growth factor 2
involved_in
ISO ISS
(PMID:28302677) GO_REF:0000024
RGD UniProt
PMID:28302677
GO_REF:0000024
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Fgfbp1
fibroblast growth factor binding protein 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:27121396)
Ensembl RGD
PMID:27121396
GO_REF:0000107
NCBI chr14:67,103,686...67,107,492
Ensembl chr14:67,104,545...67,107,496
G
Foxc2
forkhead box C2
involved_in
ISO
(MGI:3813419|PMID:18579532)
RGD
PMID:18579532
MGI:3813419
NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
G
Gata2
GATA binding protein 2
involved_in
ISO
(PMID:27780851)
RGD
PMID:27780851
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Hdac7
histone deacetylase 7
involved_in
ISO IEA
(PMID:19351956) GO_REF:0000107
RGD Ensembl
PMID:19351956
GO_REF:0000107
NCBI chr 7:128,923,918...128,961,926
Ensembl chr 7:128,923,920...128,962,072
G
Hdac9
histone deacetylase 9
involved_in
ISO
(PMID:19351956)
RGD
PMID:19351956
NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333
G
Hmox1
heme oxygenase 1
involved_in
ISO IEA
RNAcentral:URS00001230A0_9606 (PMID:24844779) GO_REF:0000107
RGD Ensembl
PMID:24844779
GO_REF:0000107
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
G
Jcad
junctional cadherin 5 associated
involved_in
ISO
(PMID:28705794)
RGD
PMID:28705794
NCBI chr17:53,089,382...53,130,996
Ensembl chr17:53,089,382...53,130,967
G
Kdr
kinase insert domain receptor
involved_in
ISO IEA
(PMID:18977327), (PMID:24205206) GO_REF:0000107
RGD Ensembl
PMID:18977327 PMID:24205206
GO_REF:0000107
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
G
Map3k3
mitogen activated protein kinase kinase kinase 3
involved_in
ISO
RNAcentral:URS0000083D87_9606 (PMID:28640956)
RGD
PMID:28640956
NCBI chr10:91,020,174...91,088,852
Ensembl chr10:91,020,174...91,088,848
G
Mir101-2
microRNA 101-2
involved_in
ISO
(PMID:24844779)
RGD
PMID:24844779
NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467
G
Mir101a
microRNA 101a
involved_in
ISO
(PMID:24844779)
RGD
PMID:24844779
NCBI chr 5:115,966,332...115,966,406
Ensembl chr 5:115,966,328...115,966,410
G
Mir10a
microRNA 10a
involved_in
ISO
RNAcentral:URS000058760A_9606 (PMID:22955733)
RGD
PMID:22955733
NCBI chr10:81,283,171...81,283,280
Ensembl chr10:81,283,171...81,283,280
G
Mir10b
microRNA 10b
involved_in
ISO
RNAcentral:URS000016D2D4_9606 (PMID:22955733)
RGD
PMID:22955733
NCBI chr 3:59,628,438...59,628,546
Ensembl chr 3:59,628,438...59,628,546
G
Mir126a
microRNA 126a
involved_in
ISO
(PMID:28065883), (PMID:28124060)
RGD
PMID:28065883 PMID:28124060
NCBI chr 3:9,415,063...9,415,180
Ensembl chr 3:9,415,063...9,415,180
G
Mir132
microRNA 132
involved_in
ISO
(PMID:28065883)
RGD
PMID:28065883
NCBI chr10:60,023,696...60,023,796
Ensembl chr10:60,023,696...60,023,796
G
Mir146a
microRNA 146a
involved_in
ISO
(PMID:24863965), (PMID:27121396)
RGD
PMID:24863965 PMID:27121396
NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
G
Mir23a
microRNA 23a
involved_in
ISO
RNAcentral:URS0000183BED_9606 (PMID:21536891)
RGD
PMID:21536891
NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
G
Mir27a
microRNA 27a
involved_in
ISO
RNAcentral:URS000059311D_9606 (PMID:21536891)
RGD
PMID:21536891
NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917
G
Mir27b
microRNA 27b
involved_in
ISO
RNAcentral:URS00003B95DA_9606 (PMID:21536891), (PMID:22184411)
RGD
PMID:21536891 PMID:22184411
NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
G
Mir296
microRNA 296
involved_in
ISO
(PMID:18977327)
RGD
PMID:18977327
NCBI chr 3:163,051,838...163,051,915
Ensembl chr 3:163,051,838...163,051,915
G
Mir31
microRNA 31
involved_in
ISO
(PMID:24558106)
RGD
PMID:24558106
NCBI chr 5:103,599,038...103,599,143
G
Mir487b
microRNA 487b
involved_in
ISO
(PMID:25660232)
RGD
PMID:25660232
NCBI chr 6:128,741,485...128,741,566
Ensembl chr 6:128,741,485...128,741,566
G
Mirlet7f-1
microRNA let7f-1
involved_in
ISO
(PMID:28345812)
RGD
PMID:28345812
NCBI chr17:16,114,130...16,114,226
Ensembl chr17:16,114,130...16,114,226
G
Mirlet7f2
microRNA let-7f-2
involved_in
ISO
(PMID:28345812)
RGD
PMID:28345812
NCBI chr X:20,980,632...20,980,714
Ensembl chr X:20,980,632...20,980,714
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:5708477|PMID:26051942)
RGD
PMID:26051942
MGI:5708477
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Pik3c2a
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
involved_in
ISO
(PMID:26175229)
RGD
PMID:26175229
NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
G
Plk2
polo-like kinase 2
involved_in
ISO IEA
(MGI:6120300|PMID:27908889) GO_REF:0000107
RGD Ensembl
PMID:27908889
GO_REF:0000107 MGI:6120300
NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
G
Ptgs2
prostaglandin-endoperoxide synthase 2
involved_in
IMP
PMID:9630216
RGD BHF-UCL
PMID:9630216 PMID:9630216
RGD:5135054 , RGD:5135054
NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188
G
Rhoj
ras homolog family member J
involved_in
ISO
(PMID:28727754)
RGD
PMID:28727754
NCBI chr 6:94,035,307...94,117,642
Ensembl chr 6:94,035,483...94,118,275
G
Srpx2
sushi-repeat-containing protein, X-linked 2
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (MGI:4412425|PMID:19667118)
UniProt GO_Central RGD
PMID:19667118
GO_REF:0000024 GO_REF:0000033 MGI:4412425
NCBI chr X:97,106,455...97,132,197
Ensembl chr X:97,106,561...97,132,195
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:30467960)
RGD
PMID:30467960
NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
G
Vegfa
vascular endothelial growth factor A
involved_in
IEA ISO
GO_REF:0000107 RNAcentral:URS00001230A0_9606 (PMID:18059339), (PMID:20551324), (PMID:23083510), (PMID:24844779), (PMID:24865854)
Ensembl RGD
PMID:18059339 PMID:20551324 PMID:23083510 PMID:24844779 PMID:24865854
GO_REF:0000107
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Bmper
BMP-binding endothelial regulator
involved_in
ISO
RNAcentral:URS0000535FDD_9606 (PMID:28124060)
RGD
PMID:28124060
NCBI chr 8:21,732,225...21,977,261
Ensembl chr 8:21,732,225...21,977,256
G
Clic3
chloride intracellular channel 3
involved_in
ISO
(PMID:28198360)
RGD
PMID:28198360
NCBI chr 3:8,271,416...8,274,023
Ensembl chr 3:8,272,097...8,274,018
G
Dll1
delta like canonical Notch ligand 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5466218|PMID:22282195) GO_REF:0000107
UniProt RGD Ensembl
PMID:22282195
GO_REF:0000024 GO_REF:0000107 MGI:5466218
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Fgf1
fibroblast growth factor 1
involved_in
ISO ISS
(PMID:23469107) GO_REF:0000024
RGD UniProt
PMID:23469107
GO_REF:0000024
NCBI chr18:30,686,555...30,772,667
Ensembl chr18:30,686,581...30,772,357
G
Fgf2
fibroblast growth factor 2
involved_in
ISO ISS
(PMID:16756958), (PMID:23469107) GO_REF:0000024
RGD UniProt
PMID:16756958 PMID:23469107
GO_REF:0000024
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Fut1
fucosyltransferase 1
involved_in
ISO ISS
(PMID:18205178) GO_REF:0000024
RGD UniProt
PMID:18205178
GO_REF:0000024
NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616
G
Ghrl
ghrelin and obestatin prepropeptide
IDA
RGD
PMID:21642627
RGD:12904963
NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
G
Ghsr
growth hormone secretagogue receptor
IMP
RGD
PMID:21642627
RGD:12904963
NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865
G
Hif1a
hypoxia inducible factor 1 subunit alpha
IMP
RGD
PMID:30052311
RGD:155663378
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hmgb1
high mobility group box 1
involved_in
ISO
(MGI:3760906|PMID:16365390)
RGD
PMID:16365390
MGI:3760906
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
G
Il10
interleukin 10
involved_in
ISO
(MGI:5749333|PMID:26235810)
RGD
PMID:26235810
MGI:5749333
NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
G
Itga5
integrin subunit alpha 5
involved_in
ISO
(PMID:19460962)
RGD
PMID:19460962
NCBI chr 7:134,478,963...134,502,837
Ensembl chr 7:134,478,968...134,502,837
G
Jak1
Janus kinase 1
involved_in
ISO
RNAcentral:URS00002075FA_9606 (PMID:20299512)
RGD
PMID:20299512
NCBI chr 5:115,780,248...115,888,841
Ensembl chr 5:115,780,248...115,888,926
G
Jcad
junctional cadherin 5 associated
involved_in
ISO
(MGI:5927448|PMID:28705794)
RGD
PMID:28705794
MGI:5927448
NCBI chr17:53,089,382...53,130,996
Ensembl chr17:53,089,382...53,130,967
G
Jmjd8
jumonji domain containing 8
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:27199445)
UniProt Ensembl RGD
PMID:27199445
GO_REF:0000024 GO_REF:0000107
NCBI chr10:14,848,965...14,851,881
Ensembl chr10:14,848,980...14,851,879
G
Klf4
KLF transcription factor 4
involved_in
ISO
RNAcentral:URS0000591950_9606 (PMID:27431648)
RGD
PMID:27431648
NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
G
Mir1
microRNA 1
involved_in
ISO
(PMID:23625462)
RGD
PMID:23625462
NCBI chr18:1,887,537...1,887,623
G
Mir1224
microRNA 1224
involved_in
ISO
(PMID:28717225)
RGD
PMID:28717225
NCBI chr11:80,306,902...80,306,986
Ensembl chr11:80,306,902...80,306,986
G
Mir125a
microRNA 125a
involved_in
ISO
(PMID:27252357)
RGD
PMID:27252357
NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
G
Mir126a
microRNA 126a
involved_in
ISO
UniProtKB:P23769 (PMID:27780851), (PMID:28578351)
RGD
PMID:27780851 PMID:28578351
NCBI chr 3:9,415,063...9,415,180
Ensembl chr 3:9,415,063...9,415,180
G
Mir1b
microRNA 1b
involved_in
ISO
(PMID:23625462)
RGD
PMID:23625462
NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
G
Mir30b
microRNA 30b
involved_in
ISO
(PMID:23086751)
RGD
PMID:23086751
NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675
G
Mir31
microRNA 31
involved_in
ISO
(PMID:26933040)
RGD
PMID:26933040
NCBI chr 5:103,599,038...103,599,143
G
Mir92a1
microRNA 92a-1
involved_in
ISO
(PMID:26299712)
RGD
PMID:26299712
NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413
G
Mir92a2
microRNA 92a-2
involved_in
ISO
(PMID:26299712)
RGD
PMID:26299712
NCBI chr X:132,421,942...132,422,033
Ensembl chr X:132,421,942...132,422,033
G
Pdpk1
3-phosphoinositide dependent protein kinase-1
involved_in
ISO IEA
(PMID:26235810) GO_REF:0000107
RGD Ensembl
PMID:26235810
GO_REF:0000107
NCBI chr10:13,105,435...13,182,664
Ensembl chr10:13,105,498...13,174,623
G
Pkm
pyruvate kinase M1/2
involved_in
ISS ISO
GO_REF:0000024 (PMID:27199445)
UniProt RGD
PMID:27199445
GO_REF:0000024
NCBI chr 8:60,057,629...60,079,600
Ensembl chr 8:60,057,402...60,079,599
G
Pkm_v1
pyruvate kinase M1/2, variant 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
G
Pkm_v2
pyruvate kinase M1/2, variant 2
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
G
S100a1
S100 calcium binding protein A1
involved_in
ISO
(PMID:24244340)
RGD
PMID:24244340
NCBI chr 2:175,993,922...175,998,765
Ensembl chr 2:175,993,922...175,999,544
G
Shh
sonic hedgehog signaling molecule
IDA
RGD
PMID:20052412
RGD:12879408
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Slc39a12
solute carrier family 39 member 12
IMP
RGD
PMID:26258299
RGD:10401832
NCBI chr17:77,353,761...77,440,384
Ensembl chr17:77,353,805...77,440,353
G
Smad1
SMAD family member 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:24047927)
Ensembl RGD
PMID:24047927
GO_REF:0000107
NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
G
Tgm2
transglutaminase 2
involved_in
ISO
(PMID:28198360)
RGD
PMID:28198360
NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981
G
Tjp1
tight junction protein 1
involved_in
ISO
(PMID:25753039) (MGI:6206452|PMID:25753039)
RGD
PMID:25753039
MGI:6206452
NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
G
Tnn
tenascin N
involved_in
ISO
(PMID:19884327)
RGD
PMID:19884327
NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO IEA
RNAcentral:URS000007F792_9606 (PMID:25251394), (PMID:26299712) GO_REF:0000107
RGD Ensembl
PMID:25251394 PMID:26299712
GO_REF:0000107
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Fbxw7
F-box and WD repeat domain containing 7
involved_in
ISO
(MGI:5619435|PMID:23507969)
RGD
PMID:23507969
MGI:5619435
NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941
G
Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2176560 (PMID:16424942)
RGD
PMID:16424942
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
G
Ceacam1
CEA cell adhesion molecule 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3640069|PMID:16680193)
UniProt RGD
PMID:16680193
GO_REF:0000024 MGI:3640069
NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
G
Fgf16
fibroblast growth factor 16
NOT|involved_in
ISO
(PMID:16756958)
RGD
PMID:16756958
NCBI chr X:70,816,658...70,828,028
Ensembl chr X:70,817,433...70,878,717
G
Fgf18
fibroblast growth factor 18
NOT|involved_in
ISO
(PMID:16756958)
RGD
PMID:16756958
NCBI chr10:17,706,011...17,737,702
Ensembl chr10:17,706,174...17,736,818
G
Glul
glutamate-ammonia ligase
involved_in
ISO IEA ISS
(PMID:30158707) GO_REF:0000107 (MGI:6199315|PMID:30158707) GO_REF:0000024
RGD Ensembl UniProt
PMID:30158707
GO_REF:0000024 GO_REF:0000107 MGI:6199315
NCBI chr13:65,969,053...66,035,121
Ensembl chr13:66,025,630...66,035,108
G
Mir23a
microRNA 23a
NOT|involved_in
ISO
(PMID:27741223)
RGD
PMID:27741223
NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
G
Ppp1r16b
protein phosphatase 1, regulatory subunit 16B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:147,323,652...147,419,658
Ensembl chr 3:147,324,126...147,418,937
G
Rhoj
ras homolog family member J
involved_in
ISO
(PMID:21628409), (PMID:30158707)
RGD
PMID:21628409 PMID:30158707
NCBI chr 6:94,035,307...94,117,642
Ensembl chr 6:94,035,483...94,118,275
G
Tspan18
tetraspanin 18
involved_in
ISO
(PMID:32694189)
RGD
PMID:32694189
NCBI chr 3:79,160,060...79,299,907
Ensembl chr 3:79,161,662...79,299,852
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