Tspan18 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 99,615,465 - 99,755,270 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 79,160,060 - 79,299,907 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 79,161,662 - 79,299,852 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 82,634,272 - 82,774,000 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 91,233,326 - 91,373,052 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 89,085,209 - 89,224,609 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 82,097,068 - 82,236,694 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 82,097,068 - 82,236,664 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 88,799,484 - 88,939,072 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 77,602,718 - 77,742,512 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 3 | 78,363,376 - 78,502,825 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q31 | NCBI | | | | |
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TSPAN18 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 44,726,310 - 44,932,423 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 44,726,465 - 44,932,423 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 44,748,512 - 44,953,974 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 44,837,628 - 44,909,463 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 44,932,703 - 45,100,673 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | p11.2 | NCBI | | | | | HuRef | 11 | 44,496,710 - 44,664,644 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 44,785,142 - 44,953,229 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 44,883,873 - 45,089,263 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Tspan18 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 93,032,105 - 93,164,898 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 93,032,105 - 93,164,850 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 93,201,760 - 93,334,551 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 93,201,760 - 93,334,505 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 93,041,917 - 93,174,644 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 93,002,599 - 93,135,289 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 94,597,454 - 94,729,881 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | E1 | NCBI | | | | | cM Map | 2 | 51.37 | NCBI | | | | |
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Tspan18 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955422 | 2,833,130 - 2,871,460 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 2,833,124 - 2,871,460 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TSPAN18 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 46,940,695 - 47,144,819 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 46,947,103 - 47,148,202 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 44,686,159 - 44,890,196 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 45,180,395 - 45,384,114 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 45,349,629 - 45,384,101 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TSPAN18 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 18 | 44,386,676 - 44,539,859 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 44,388,761 - 44,445,847 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 43,116,656 - 43,302,513 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 45,045,146 - 45,231,055 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 45,045,225 - 45,105,837 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 44,528,315 - 44,714,214 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 44,081,829 - 44,267,706 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 44,815,088 - 45,000,937 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tspan18 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 21,730,017 - 21,776,978 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936562 | 3,843,780 - 3,857,679 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936562 | 3,842,035 - 3,968,555 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TSPAN18 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 17,465,633 - 17,634,715 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 17,465,624 - 17,671,737 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 19,000,959 - 19,021,135 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TSPAN18 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 20,418,064 - 20,628,756 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 20,419,131 - 20,442,651 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 117,663,040 - 117,866,186 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tspan18 (Heterocephalus glaber - naked mole-rat) |
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