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Gene: Synj2bp (synaptojanin 2 binding protein) Rattus norvegicus
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Symbol: Synj2bp
Name: synaptojanin 2 binding protein
Description: Exhibits protein C-terminus binding activity. Involved in intracellular distribution of mitochondria. Localizes to the integral component of mitochondrial outer membrane. Predicted to colocalize with the ionotropic glutamate receptor complex. Orthologous to several human genes including SYNJ2BP (synaptojanin 2 binding protein); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: mitochondrial outer membrane protein 25; NPW16; Omp25; outer membrane protein; synaptojanin-2-binding protein
Orthologs:
Homo sapiens (human) : SYNJ2BP (synaptojanin 2 binding protein)  HGNC  Alliance
Mus musculus (house mouse) : Synj2bp (synaptojanin 2 binding protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Synj2bp (synaptojanin 2 binding protein)
Canis lupus familiaris (dog) : SYNJ2BP (synaptojanin 2 binding protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Synj2bp (synaptojanin 2 binding protein)
Sus scrofa (pig) : SYNJ2BP (synaptojanin 2 binding protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06105,224,166 - 105,261,549 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6105,224,166 - 105,261,549 (-)Ensembl
Rnor_5.06113,370,333 - 113,407,716 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46105,352,102 - 105,389,779 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16105,356,721 - 105,393,256 (-)NCBI
Celera699,029,620 - 99,067,302 (-)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Synj2bp
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 69400
Created: 2001-11-27
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.