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ONTOLOGY REPORT - ANNOTATIONS


Term:anatomical structure formation involved in morphogenesis
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Accession:GO:0048646 term browser browse the term
Definition:The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.
Comment:Note that, for example, the formation of a pseudopod in an amoeba would not be considered formation involved in morphogenesis because it would not be thought of as the formation of an anatomical structure that was part of the shaping of the amoeba during its development. The formation of an axon from a neuron would be considered the formation of an anatomical structure involved in morphogenesis because it contributes to the creation of the form of the neuron in a developmental sense.
Synonyms:exact_synonym: formation of an anatomical structure involved in morphogenesis



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anatomical structure formation involved in morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:104327 (PMID:16916379) RGD PMID:16916379 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:1857654|MGI:2136986 (PMID:10049573), (PMID:16854970), (PMID:17878916) RGD PMID:10049573 PMID:16854970 PMID:17878916 NCBI chr 3:182,059,318...182,135,273 JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101927 (PMID:17878916)
Ensembl
RGD
PMID:17878916 GO_REF:0000107 NCBI chr 4:35,965,579...35,969,973 JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO MGI:101926 (PMID:17878916) RGD PMID:17878916 NCBI chr 4:34,984,264...34,989,926 JBrowse link
G Foxa1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1347476 (PMID:23383217)
Ensembl
RGD
PMID:23383217 GO_REF:0000107 NCBI chr 6:75,099,907...75,136,534 JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347472|MGI:99783 (PMID:10498685), (PMID:23383217) RGD PMID:10498685 PMID:23383217 NCBI chr 3:135,470,123...135,474,326 JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:3720332 (PMID:16319112) RGD PMID:16319112 NCBI chr17:68,643,760...68,666,000 JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:95729 (PMID:9731531) RGD PMID:9731531 NCBI chr13:29,946,882...30,163,589 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:95728 (PMID:9731531) RGD PMID:9731531 NCBI chr17:54,134,064...54,405,198 JBrowse link
G Grb2 growth factor receptor bound protein 2 acts_upstream_of_or_within ISO MGI:2677457 (PMID:11369229) RGD PMID:11369229 NCBI chr10:101,380,354...101,448,138 JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:96182 (PMID:10529420) RGD PMID:10529420 NCBI chr 4:81,255,814...81,258,587 JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:96170 (PMID:10529420) RGD PMID:10529420 NCBI chr10:81,331,507...81,332,928 JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1347476|MGI:2385716|MGI:2675121 (PMID:10498685), (PMID:15930111)
UniProt
RGD
PMID:10498685 PMID:15930111 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617 JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO MGI:1890208 (PMID:11719201) RGD PMID:11719201 NCBI chr 3:22,113,619...22,143,909 JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857494 (PMID:17522155)
Ensembl
RGD
PMID:17522155 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483 JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:1856970 (PMID:7924997) RGD PMID:7924997 NCBI chr20:29,368,436...29,376,837 JBrowse link
G Nog noggin acts_upstream_of_or_within ISO MGI:88180 (PMID:16916379) RGD PMID:16916379 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934261 (PMID:9768363) RGD PMID:9768363 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2135304|MGI:3589809|MGI:3625175 (PMID:17522155), (PMID:9851841) RGD PMID:9851841 PMID:17522155 NCBI chr 2:117,536,929...117,539,340 JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO MGI:3714982 (PMID:19096026) RGD PMID:19096026 NCBI chr 8:97,531,960...97,559,988 JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1861713 (PMID:17878916) RGD PMID:17878916 NCBI chr11:88,343,647...88,554,543 JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2178826 (PMID:10431240) RGD PMID:10431240 NCBI chr10:89,180,224...89,224,195 JBrowse link
abducens nerve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,587 JBrowse link
G Mafb MAF bZIP transcription factor B involved_in ISS
ISO
GO_REF:0000024
(PMID:27181683)
UniProt
RGD
PMID:27181683 GO_REF:0000024 NCBI chr 3:169,417,890...169,419,810 JBrowse link
acrosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acrbp acrosin binding protein involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:27303034)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:27303034 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:157,851,149...157,864,211 JBrowse link
G Actl7a actin-like 7a involved_in ISS
ISO
GO_REF:0000024
(PMID:32923619), (PMID:36734600)
UniProt
RGD
PMID:32923619 PMID:36734600 GO_REF:0000024 NCBI chr 5:71,447,447...71,450,440 JBrowse link
G Actl9 actin-like 9 involved_in ISO (PMID:33626338) RGD PMID:33626338 NCBI chr 7:14,234,504...14,235,881 JBrowse link
G Actl9b actin-like 9b involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:63,830,481...63,831,818 JBrowse link
G Agfg1 ArfGAP with FG repeats 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2182772 (PMID:11711676), (PMID:14724135)
GO_Central
RGD
PMID:11711676 PMID:14724135 GO_REF:0000033 NCBI chr 9:84,124,845...84,182,615 JBrowse link
G Agfg1-ps1 ArfGAP with FG repeats 1, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Agfg2 ArfGAP with FG repeats 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:19,012,228...19,048,433 JBrowse link
G Ccdc136 coiled-coil domain containing 136 involved_in IBA
ISO
GO_REF:0000033
(PMID:27076447)
GO_Central
RGD
PMID:27076447 GO_REF:0000033 NCBI chr 4:57,997,825...58,027,598 JBrowse link
G Ccdc38 coiled-coil domain containing 38 involved_in ISO (PMID:37709195) RGD PMID:37709195 NCBI chr 7:28,055,883...28,129,938 JBrowse link
G Ccdc42 coiled-coil domain containing 42 acts_upstream_of_or_within ISO MGI:3800251 (PMID:26945718) RGD PMID:26945718 NCBI chr10:53,289,956...53,300,135 JBrowse link
G Chn2 chimerin 2 involved_in IEP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:8440677 GO_REF:0000033, RGD:724725 NCBI chr 4:84,478,989...84,738,068 JBrowse link
G Cylc1 cylicin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:38573307) RGD PMID:38573307 NCBI chr  X:76,108,111...76,197,431 JBrowse link
G Dcaf17 DDB1 and CUL4 associated factor 17 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:29907856)
GO_REF:0000107
RGD
Ensembl
PMID:29907856 GO_REF:0000107 NCBI chr 3:55,863,776...55,895,601 JBrowse link
G Fabp9 fatty acid binding protein 9 IEP RGD PMID:7958448 RGD:634410 NCBI chr 2:91,591,842...91,595,873 JBrowse link
G Fam209 family with sequence similarity 209 involved_in ISO (PMID:34471926) RGD PMID:34471926 NCBI chr 3:161,240,062...161,241,747 JBrowse link
G Fsip1 fibrous sheath interacting protein 1 acts_upstream_of_or_within ISO (PMID:33901807) RGD PMID:33901807 NCBI chr 3:105,074,584...105,217,180 JBrowse link
G Garin1a golgi associated RAB2 interactor 1A involved_in ISS
ISO
GO_REF:0000024
(PMID:34714330)
UniProt
RGD
PMID:34714330 GO_REF:0000024 NCBI chr 4:57,880,019...57,890,824 JBrowse link
G Garin1b golgi associated RAB2 interactor 1B involved_in ISS
ISO
GO_REF:0000024
(PMID:34714330)
UniProt
RGD
PMID:34714330 GO_REF:0000024 NCBI chr 4:58,880,537...58,903,966 JBrowse link
G Garin3 golgi associated RAB2 interactor family member 3 acts_upstream_of_or_within ISO (PMID:38935810) RGD PMID:38935810 NCBI chr10:30,829,877...30,833,115 JBrowse link
G Izumo3 IZUMO family member 3 involved_in ISO
IEA
(PMID:34114279)
GO_REF:0000107
RGD
Ensembl
PMID:34114279 GO_REF:0000107 NCBI chr 5:106,874,321...106,876,978 JBrowse link
G KIAA0319l KIAA0319 like acts_upstream_of_or_within ISO MGI:6111779 (PMID:29991750) RGD PMID:29991750 NCBI chr 5:139,047,847...139,140,709 JBrowse link
G Mfsd14a major facilitator superfamily domain containing 14A acts_upstream_of_or_within ISO MGI:5763015 (PMID:27107036) RGD PMID:27107036 NCBI chr 2:204,579,174...204,611,600 JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2183405 (PMID:10733589)
GO_Central
RGD
PMID:10733589 GO_REF:0000033 NCBI chr 1:79,372,123...79,407,379 JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:2683481 (PMID:13129914) RGD PMID:13129914 NCBI chr10:59,533,042...59,591,808 JBrowse link
G Pdcl2 phosducin-like 2 acts_upstream_of_or_within
involved_in
ISO MGI:7546801 (PMID:36278277) RGD PMID:36278277 NCBI chr14:31,874,563...31,895,265 JBrowse link
G Pfn4 profilin family, member 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:35950913)
UniProt
RGD
PMID:35950913 GO_REF:0000024 NCBI chr 6:27,786,619...27,796,710 JBrowse link
G Pla2g3 phospholipase A2, group III acts_upstream_of_or_within ISO MGI:4461174 (PMID:20424323) RGD PMID:20424323 NCBI chr14:82,589,908...82,597,542 JBrowse link
G Pln phospholamban involved_in ISS
ISO
GO_REF:0000024
(PMID:30733280)
UniProt
RGD
PMID:30733280 GO_REF:0000024 NCBI chr20:33,166,512...33,182,241 JBrowse link
G Poc1b POC1 centriolar protein B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30298696), (PMID:37070736)
GO_REF:0000107
RGD
Ensembl
PMID:30298696 PMID:37070736 GO_REF:0000107 NCBI chr 7:33,924,112...34,025,908 JBrowse link
G Rfx2 regulatory factor X2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:26162102)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26162102 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:1,604,636...1,671,220 JBrowse link
G Sec23ip SEC23 interacting protein acts_upstream_of_or_within ISO MGI:5085903 (PMID:21640725) RGD PMID:21640725 NCBI chr 1:183,320,950...183,363,944 JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:28476888)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28476888 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:156,147,855...156,198,497 JBrowse link
G Spaca1 sperm acrosome associated 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5439282 (PMID:22949614)
GO_Central
RGD
PMID:22949614 GO_REF:0000033 NCBI chr 5:48,525,406...48,540,676 JBrowse link
G Spink2 serine peptidase inhibitor, Kazal type 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:28554943)
UniProt
RGD
PMID:28554943 GO_REF:0000024 NCBI chr14:30,967,682...30,974,326 JBrowse link
G Sppl2c signal peptide peptidase like 2C involved_in ISO (PMID:30733280), (PMID:30733281) RGD PMID:30733280 PMID:30733281 NCBI chr10:89,095,279...89,097,487 JBrowse link
G Tbc1d20 TBC1 domain family, member 20 acts_upstream_of_or_within ISO MGI:1856684 (PMID:24239381) RGD PMID:24239381 NCBI chr 3:140,768,537...140,787,010 JBrowse link
G Tbpl1 TATA-box binding protein like 1 acts_upstream_of_or_within ISO MGI:2182539 (PMID:11861477) RGD PMID:11861477 NCBI chr 1:22,777,892...22,803,305 JBrowse link
G Tmf1 TATA element modulatory factor 1 acts_upstream_of_or_within ISO MGI:4867389|MGI:4867392 (PMID:20691678) RGD PMID:20691678 NCBI chr 4:131,316,630...131,345,666 JBrowse link
G Tmprss12 transmembrane serine protease 12 involved_in ISO (PMID:35547804) RGD PMID:35547804 NCBI chr 7:131,433,158...131,445,806 JBrowse link
G Txndc8 thioredoxin domain containing 8 IEP RGD PMID:15181017 RGD:1303999 NCBI chr 5:72,749,708...72,785,858 JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B involved_in ISO (PMID:31218450) RGD PMID:31218450 NCBI chr 7:66,557,862...67,128,429 JBrowse link
G Zpbp zona pellucida binding protein involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3762589 (PMID:17664285)
GO_Central
RGD
PMID:17664285 GO_REF:0000033 NCBI chr14:85,830,971...86,030,778 JBrowse link
G Zpbp2 zona pellucida binding protein 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3762590 (PMID:17664285)
GO_Central
RGD
PMID:17664285 GO_REF:0000033 NCBI chr10:84,055,184...84,063,776 JBrowse link
adrenal cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISO (PMID:17537799) RGD PMID:17537799 NCBI chr 1:12,312,426...12,314,869 JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:17537799)
UniProt
RGD
PMID:17537799 GO_REF:0000024 NCBI chr 3:112,019,721...112,068,454 JBrowse link
amelogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin, X-linked involved_in ISO (PMID:26403673) RGD PMID:26403673 NCBI chr  X:25,076,362...25,087,660 JBrowse link
G Ascl5 achaete-scute family bHLH transcription factor 5 involved_in ISO (PMID:30504223), (PMID:34812512) RGD PMID:30504223 PMID:34812512 NCBI chr13:47,491,799...47,493,269 JBrowse link
G Atf2 activating transcription factor 2 IDA RGD PMID:15218628 RGD:10053659 NCBI chr 3:79,125,814...79,202,896 JBrowse link
G Cftr CF transmembrane conductance regulator involved_in IEA
ISO
GO_REF:0000107
(PMID:26403673)
Ensembl
RGD
PMID:26403673 GO_REF:0000107 NCBI chr 4:47,422,084...47,694,646 JBrowse link
G Csf3r colony stimulating factor 3 receptor IEP RGD PMID:10206335 RGD:5134351 NCBI chr 5:138,298,605...138,318,224 JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (PMID:25027178) RGD PMID:25027178 NCBI chr14:5,870,232...5,876,339 JBrowse link
G Enam enamelin involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3055582|MGI:3055586|MGI:3055587|MGI:3796583 (PMID:15649948), (PMID:18252720), (PMID:22813216), (PMID:24603688)
GO_Central
RGD
PMID:15649948 PMID:18252720 PMID:22813216 PMID:24603688 GO_REF:0000033 NCBI chr14:19,556,729...19,581,433 JBrowse link
G Klk4 kallikrein-related peptidase 4 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:15235027)
MGI:4355346 (PMID:19578120), (PMID:21454549), (PMID:22243248)
GO_REF:0000033
RGD
GO_Central
PMID:15235027 PMID:19578120 PMID:21454549 PMID:22243248 GO_REF:0000033 NCBI chr 1:94,344,195...94,349,425 JBrowse link
G Klk5 kallikrein related-peptidase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:94,296,574...94,304,768 JBrowse link
G Mmp20 matrix metallopeptidase 20 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2447874 (PMID:15557396), (PMID:21454549), (PMID:22243248)
GO_Central
RGD
PMID:15557396 PMID:21454549 PMID:22243248 GO_REF:0000033 NCBI chr 8:4,789,415...4,830,035 JBrowse link
G Perp p53 apoptosis effector related to PMP22 acts_upstream_of_or_within ISO MGI:2683069 (PMID:21285247) RGD PMID:21285247 NCBI chr 1:15,361,784...15,374,230 JBrowse link
G Relt RELT, TNF receptor involved_in ISO
IBA
(PMID:30506946)
GO_REF:0000033
RGD
GO_Central
PMID:30506946 GO_REF:0000033 NCBI chr 1:155,206,976...155,224,609 JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) RGD PMID:38172607 NCBI chr10:10,567,834...10,572,453 JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in ISO (PMID:23375655), (PMID:27752731) RGD PMID:23375655 PMID:27752731 NCBI chr 6:121,279,590...121,419,811 JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (PMID:26403673) RGD PMID:26403673 NCBI chr 4:11,628,860...11,646,961 JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO (PMID:35181734) RGD PMID:35181734 NCBI chr 8:83,718,897...83,902,128 JBrowse link
angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr3 atypical chemokine receptor 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:98,247,300...98,258,877 JBrowse link
G Actg1 actin, gamma 1 acts_upstream_of_or_within_positive_effect
involved_in
ISO
IEA
(PMID:25705373)
GO_REF:0000107
RGD
Ensembl
PMID:25705373 GO_REF:0000107 NCBI chr10:106,118,106...106,120,951 JBrowse link
G Actg1l1 actin, gamma 1 like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:72,977,767...72,979,691 JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:16752392), (PMID:32082362)
MGI:2155980|MGI:2155981 (PMID:10716993), (PMID:11062473)
GO_REF:0000033
RGD
GO_Central
PMID:10716993 PMID:11062473 PMID:16752392 PMID:32082362 GO_REF:0000033 NCBI chr 7:134,117,917...134,135,306 JBrowse link
G Adam15 ADAM metallopeptidase domain 15 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:174,754,629...174,765,136 JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:19003792) RGD PMID:19003792 NCBI chr 1:194,776,559...194,789,330 JBrowse link
G Adgra2 adhesion G protein-coupled receptor A2 acts_upstream_of_or_within ISO MGI:4949903 (PMID:21421844) RGD PMID:21421844 NCBI chr16:64,932,964...64,971,433 JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21724588)
UniProt
Ensembl
RGD
PMID:21724588 GO_REF:0000024 GO_REF:0000107 NCBI chr19:10,003,963...10,041,122 JBrowse link
G Adm2 adrenomedullin 2 involved_in ISO (PMID:20596610) RGD PMID:20596610 NCBI chr 7:120,393,179...120,394,965 JBrowse link
G Adra2b adrenoceptor alpha 2B acts_upstream_of_or_within ISO MGI:1857118 (PMID:12068299) RGD PMID:12068299 NCBI chr 3:114,585,174...114,589,220 JBrowse link
G Amot angiomotin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:108,982,399...109,041,265 JBrowse link
G Amotl1 angiomotin-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:11,348,651...11,467,564 JBrowse link
G Amotl2 angiomotin like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:103,303,368...103,319,161 JBrowse link
G Ang angiogenin acts_upstream_of_or_within
involved_in
ISO (PMID:8448182)
(PMID:17125737), (PMID:2479414), (PMID:3470787), (PMID:4074709)
RGD PMID:2479414 PMID:3470787 PMID:4074709 PMID:8448182 PMID:17125737 NCBI chr15:24,312,711...24,323,361 JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,398,330...24,415,909 JBrowse link
G Angpt1 angiopoietin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:10617467), (PMID:18505784)
GO_Central
RGD
PMID:10617467 PMID:18505784 GO_REF:0000033 NCBI chr 7:75,415,959...75,668,696 JBrowse link
G Angpt2 angiopoietin 2 involved_in
acts_upstream_of_or_within
IEP
IBA
ISO
GO_REF:0000033
MGI:103178 (PMID:16778080)
GO_Central
RGD
PMID:16778080 PMID:16439712 GO_REF:0000033, RGD:2314218 NCBI chr16:71,088,364...71,138,805 JBrowse link
G Angptl4 angiopoietin-like 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:14,550,288...14,557,797 JBrowse link
G Anpep alanyl aminopeptidase, membrane involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:143,176,645...143,219,447 JBrowse link
G Anxa2 annexin A2 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:11866539)
MGI:3028929 (PMID:14702107)
GO_REF:0000107
RGD
Ensembl
PMID:11866539 PMID:14702107 GO_REF:0000107 NCBI chr 8:78,986,252...79,022,638 JBrowse link
G Apela apelin receptor early endogenous ligand involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:24,694,356...24,703,466 JBrowse link
G Apln apelin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:132,058,739...132,091,518 JBrowse link
G Aplnr apelin receptor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:70,217,407...70,221,052 JBrowse link
G Apold1 apolipoprotein L domain containing 1 involved_in IEP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:15102925 GO_REF:0000033, RGD:1303988 NCBI chr 4:169,499,728...169,557,075 JBrowse link
G Arhgap24 Rho GTPase activating protein 24 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:6,800,624...7,183,877 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in IEA
ISO
GO_REF:0000107
(PMID:17510399)
Ensembl
RGD
PMID:17510399 GO_REF:0000107 NCBI chr 7:515,454...521,858 JBrowse link
G Bcam basal cell adhesion molecule (Lutheran blood group) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:79,415,016...79,429,403 JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:3042751 (PMID:15070745) RGD PMID:15070745 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (PMID:24882581) RGD PMID:24882581 NCBI chr16:9,740,751...9,786,861 JBrowse link
G C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:17228361)
MGI:3531503 (PMID:14745002)
GO_REF:0000107
RGD
Ensembl
PMID:14745002 PMID:17228361 GO_REF:0000107 NCBI chr 4:36,894,440...36,932,434 JBrowse link
G Calcrl calcitonin receptor like receptor involved_in ISO
IBA
IEA
(PMID:20596610)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:20596610 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:89,835,071...89,932,616 JBrowse link
G Casp8 caspase 8 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:31748744)
MGI:3609638 (PMID:12404118)
UniProt
RGD
PMID:12404118 PMID:31748744 GO_REF:0000024 NCBI chr 9:67,747,109...67,806,699 JBrowse link
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95516 (PMID:12759260)
Ensembl
RGD
PMID:12759260 GO_REF:0000107 NCBI chr 4:46,606,538...46,639,616 JBrowse link
G Ccdc134 coiled-coil domain containing 134 acts_upstream_of_or_within ISO MGI:6117856 (PMID:29115376) RGD PMID:29115376 NCBI chr 7:113,644,557...113,659,050 JBrowse link
G Ccl12 C-C motif chemokine ligand 12 involved_in ISO (PMID:18334747) RGD PMID:18334747 NCBI chr10:67,567,876...67,569,426 JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within TAS
ISO
MGI:2663631 (PMID:10082563), (PMID:10446209), (PMID:12736220) RGD PMID:10082563 PMID:10446209 PMID:12736220 PMID:12193543 RGD:628364 NCBI chr 1:22,621,498...22,624,614 JBrowse link
G Ccn3 cellular communication network factor 3 involved_in ISO
ISS
(PMID:12695522)
GO_REF:0000024
RGD
UniProt
PMID:12695522 GO_REF:0000024 NCBI chr 7:87,983,788...87,990,810 JBrowse link
G Cd93 CD93 molecule involved_in ISO (PMID:28671670) RGD PMID:28671670 NCBI chr 3:135,891,859...135,898,378 JBrowse link
G Cfh complement factor H acts_upstream_of_or_within ISO (PMID:28057640) RGD PMID:28057640 NCBI chr13:51,512,376...51,613,829 JBrowse link
G Cib1 calcium and integrin binding 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:143,587,591...143,593,153 JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3838012 (PMID:19197003)
Ensembl
RGD
PMID:19197003 GO_REF:0000107 NCBI chr 5:147,453,702...147,513,455 JBrowse link
G Col12a1 collagen type XII alpha 1 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:80,547,592...80,665,665 JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2179134 (PMID:11927538), (PMID:15188432)
GO_Central
RGD
PMID:11927538 PMID:15188432 GO_REF:0000033 NCBI chr20:11,474,104...11,582,593 JBrowse link
G Cspg4 chondroitin sulfate proteoglycan 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:57,264,962...57,300,010 JBrowse link
G Cxcr3 C-X-C motif chemokine receptor 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:66,844,318...66,846,969 JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154690 (PMID:19005183)
Ensembl
RGD
PMID:19005183 GO_REF:0000107 NCBI chr 6:21,093,927...21,103,091 JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:18,915,290...19,086,282 JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3576927|MGI:3719397 (PMID:15613470), (PMID:17613256) RGD PMID:15613470 PMID:17613256 NCBI chr 6:123,627,529...123,692,278 JBrowse link
G Dll4 delta like canonical Notch ligand 4 acts_upstream_of_or_within ISO MGI:3056460|MGI:5302387 (PMID:15466160), (PMID:23918385) RGD PMID:15466160 PMID:23918385 NCBI chr 3:126,770,945...126,780,769 JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO MGI:3055139 (PMID:20724702) RGD PMID:20724702 NCBI chr 4:116,490,877...116,690,709 JBrowse link
G Ecm1 extracellular matrix protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:183,287,491...183,292,729 JBrowse link
G Edn2 endothelin 2 involved_in IEA
ISO
GO_REF:0000107
MGI:105923 (PMID:24043815)
Ensembl
RGD
PMID:24043815 GO_REF:0000107 NCBI chr 5:133,751,316...133,756,814 JBrowse link
G Ednra endothelin receptor type A involved_in ISO MGI:95284 (PMID:24043815) RGD PMID:24043815 NCBI chr19:47,137,360...47,207,961 JBrowse link
G Efna1 ephrin A1 NAS RGD PMID:12615978 RGD:1299268 NCBI chr 2:174,681,676...174,689,061 JBrowse link
G Egf epidermal growth factor involved_in ISO
IEA
(PMID:15611079)
GO_REF:0000107
RGD
Ensembl
PMID:15611079 GO_REF:0000107 NCBI chr 2:220,893,660...220,976,331 JBrowse link
G Egfl7 EGF-like-domain, multiple 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:29,802,481...29,814,966 JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:22915762) RGD PMID:22915762 NCBI chr 4:104,363,838...104,425,271 JBrowse link
G Elk3 ETS transcription factor ELK3 acts_upstream_of_or_within ISO MGI:2182950 (PMID:12975317) RGD PMID:12975317 NCBI chr 7:29,655,676...29,718,163 JBrowse link
G Emc10 ER membrane protein complex subunit 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:94,980,260...94,988,847 JBrowse link
G Emcn endomucin involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:11594763)
HGNC-UCL
Ensembl
RGD
PMID:11594763 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:228,564,445...228,644,370 JBrowse link
G Eng endoglin acts_upstream_of_or_within ISO MGI:2177822|MGI:2177823 (PMID:10625534), (PMID:12941632) RGD PMID:10625534 PMID:12941632 NCBI chr 3:36,332,190...36,370,324 JBrowse link
G Enpep glutamyl aminopeptidase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2182774 (PMID:14998491)
Ensembl
RGD
PMID:14998491 GO_REF:0000107 NCBI chr 2:217,781,985...217,851,947 JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861921|MGI:2386334|MGI:2663583 (PMID:12053176), (PMID:15728559), (PMID:15851592)
Ensembl
RGD
PMID:12053176 PMID:15728559 PMID:15851592 GO_REF:0000107 NCBI chr 6:13,543,252...13,626,147 JBrowse link
G Epgn epithelial mitogen involved_in ISO
ISS
(PMID:15611079)
GO_REF:0000024
RGD
HGNC-UCL
PMID:15611079 GO_REF:0000024 NCBI chr14:17,076,774...17,084,806 JBrowse link
G Epha1 Eph receptor A1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:72,213,022...72,227,543 JBrowse link
G Epha2 Eph receptor A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:158,888,629...158,917,100 JBrowse link
G Ephb1 Eph receptor B1 involved_in ISO
ISS
(PMID:9499402)
GO_REF:0000024
RGD
UniProt
PMID:9499402 GO_REF:0000024 NCBI chr 8:111,386,432...111,823,759 JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (PMID:9990854) RGD PMID:9990854 NCBI chr 5:154,179,065...154,360,459 JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (PMID:9990854) RGD PMID:9990854 NCBI chr11:93,345,098...93,363,775 JBrowse link
G Ephb4 EPH receptor B4 involved_in ISO
IBA
(PMID:10518221)
GO_REF:0000033
RGD
GO_Central
PMID:10518221 GO_REF:0000033 NCBI chr12:24,963,174...24,988,473 JBrowse link
G Ereg epiregulin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:17,311,485...17,325,260 JBrowse link
G Esm1 endothelial cell-specific molecule 1 involved_in ISO
IBA
(PMID:11866539)
GO_REF:0000033
RGD
GO_Central
PMID:11866539 GO_REF:0000033 NCBI chr 2:46,609,253...46,617,991 JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:30,937,670...31,023,786 JBrowse link
G Fgf10 fibroblast growth factor 10 IEP RGD PMID:12565793 RGD:727503 NCBI chr 2:50,801,171...50,878,218 JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2178751 (PMID:17014841)
Ensembl
RGD
PMID:17014841 GO_REF:0000107 NCBI chr10:17,706,011...17,737,702 JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO MGI:97306 (PMID:16648142) RGD PMID:16648142 NCBI chr 2:122,164,454...122,218,796 JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (PMID:16778080), (PMID:17544391) RGD PMID:16778080 PMID:17544391 NCBI chr15:32,208,993...32,254,952 JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:95523 (PMID:16778080) RGD PMID:16778080 NCBI chr16:73,194,631...73,249,855 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:95522 (PMID:16778080)
GO_REF:0000033
RGD
GO_Central
PMID:16778080 GO_REF:0000033 NCBI chr 1:194,175,703...194,280,914 JBrowse link
G Flna filamin A involved_in ISO (PMID:17172441) RGD PMID:17172441 NCBI chr  X:157,159,051...157,185,559 JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000043
MGI:1857717 (PMID:14982871)
UniProt
RGD
PMID:14982871 GO_REF:0000043 NCBI chr12:12,333,050...12,504,750 JBrowse link
G Flt4 Fms related receptor tyrosine kinase 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:34,414,834...34,455,878 JBrowse link
G Fn1 fibronectin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:80,645,507...80,714,200 JBrowse link
G Fzd4 frizzled class receptor 4 acts_upstream_of_or_within ISO MGI:102570|MGI:4412057 (PMID:27823583) RGD PMID:27823583 NCBI chr 1:143,279,934...143,288,799 JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177951 (PMID:11092808)
Ensembl
RGD
PMID:11092808 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276 JBrowse link
G Fzd8 frizzled class receptor 8 acts_upstream_of_or_within ISO (PMID:19129494) RGD PMID:19129494 NCBI chr17:57,312,924...57,320,551 JBrowse link
G Gab1 GRB2-associated binding protein 1 involved_in ISO (PMID:17178724) RGD PMID:17178724 NCBI chr19:27,131,262...27,239,236 JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of ISO MGI:1857743 (PMID:9043071) RGD PMID:9043071 NCBI chr 4:120,654,205...120,667,763 JBrowse link
G Gdf2 growth differentiation factor 2 involved_in ISO (PMID:23972370) RGD PMID:23972370 NCBI chr16:9,255,430...9,261,429 JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:11866539) RGD PMID:11866539 NCBI chr 2:187,291,227...187,310,770 JBrowse link
G Glul glutamate-ammonia ligase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:68,519,500...68,585,554 JBrowse link
G Gna13 G protein subunit alpha 13 acts_upstream_of_or_within ISO MGI:2151775 (PMID:8999798) RGD PMID:8999798 NCBI chr10:94,837,271...94,870,290 JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in ISO (PMID:28386128) RGD PMID:28386128 NCBI chr11:41,898,300...41,899,646 JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (PMID:18505784) RGD PMID:18505784 NCBI chr 3:100,512,317...100,524,001 JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:3042297 (PMID:15073150) RGD PMID:15073150 NCBI chr10:42,006,646...42,009,213 JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:37,928,145...37,931,488 JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:11866539) RGD PMID:11866539 NCBI chr 2:93,096,605...93,100,316 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2179429|MGI:2386679 (PMID:14659802), (PMID:15073147)
Ensembl
RGD
PMID:14659802 PMID:15073147 GO_REF:0000107 NCBI chr 6:98,357,788...98,405,068 JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:77,718,110...77,750,448 JBrowse link
G Hmox1 heme oxygenase 1 IDA RGD PMID:12593860 RGD:1598394 NCBI chr19:13,452,365...13,479,823 JBrowse link
G Hoxa3 homeobox A3 involved_in ISO (PMID:17972163) RGD PMID:17972163 NCBI chr 4:81,269,243...81,313,218 JBrowse link
G Hoxa7 homeobox A7 involved_in ISO
IEA
(PMID:17972163)
GO_REF:0000107
RGD
Ensembl
PMID:17972163 GO_REF:0000107 NCBI chr 4:81,315,730...81,317,629 JBrowse link
G Hoxb13 homeo box B13 involved_in ISO (PMID:17972163) RGD PMID:17972163 NCBI chr10:81,160,498...81,162,777 JBrowse link
G Hoxb3 homeo box B3 involved_in ISO (PMID:17972163) RGD PMID:17972163 NCBI chr10:81,258,739...81,314,134 JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:3715259 (PMID:17405882) RGD PMID:17405882 NCBI chr 9:38,283,502...38,322,684 JBrowse link
G Htatip2 HIV-1 Tat interactive protein 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:108,609,424...108,624,810 JBrowse link
G Igfbp7 insulin-like growth factor binding protein 7 involved_in ISO (PMID:38218180) RGD PMID:38218180 NCBI chr14:30,737,414...30,797,317 JBrowse link
G Il15 interleukin 15 TAS RGD PMID:14581351 RGD:1304452 NCBI chr19:42,536,160...42,611,349 JBrowse link
G Il18 interleukin 18 involved_in ISO
ISS
IEA
(PMID:11466388)
GO_REF:0000107
RGD
Ensembl
PMID:11466388 PMID:11466388 GO_REF:0000107, RGD:8553941 NCBI chr 8:59,802,072...59,829,275 JBrowse link
G Itga2b integrin subunit alpha 2b involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:87,408,532...87,426,055 JBrowse link
G Itga5 integrin subunit alpha 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:136,358,097...136,381,305 JBrowse link
G Itgav integrin subunit alpha V involved_in IEP
IBA
ISO
GO_REF:0000033
(PMID:11866539)
GO_Central
RGD
PMID:11866539 PMID:12926533 GO_REF:0000033, RGD:1582460 NCBI chr 3:89,245,382...89,333,512 JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (PMID:29763414) RGD PMID:29763414 NCBI chr19:73,602,277...73,650,271 JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in ISO
IEA
(PMID:20592283)
(PMID:15994945)
GO_REF:0000107
RGD
Ensembl
PMID:15994945 PMID:20592283 GO_REF:0000107 NCBI chr 8:25,508,461...25,569,306 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within IMP
ISO
VEGF-induced corneal neovascularization
(PMID:16847049)
RGD PMID:16847049 PMID:15126605 RGD:2290550 NCBI chr 5:115,009,900...115,012,993 JBrowse link
G Kctd10 potassium channel tetramerization domain containing 10 acts_upstream_of_or_within ISO MGI:5751542 (PMID:25401743) RGD PMID:25401743 NCBI chr12:42,230,159...42,248,792 JBrowse link
G Kdr kinase insert domain receptor involved_in IEA
IBA
GO_REF:0000043
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000043 NCBI chr14:32,572,031...32,615,204 JBrowse link
G Klf5 KLF transcription factor 5 acts_upstream_of_or_within ISO MGI:3038696 (PMID:12101409) RGD PMID:12101409 NCBI chr15:76,060,320...76,079,445 JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO MGI:3703328 (PMID:16943282) RGD PMID:16943282 NCBI chr 7:56,415,053...56,499,047 JBrowse link
G Lep leptin involved_in ISO (PMID:19910644), (PMID:21771332) RGD PMID:19910644 PMID:21771332 NCBI chr 4:58,626,529...58,640,663 JBrowse link
G Lepr leptin receptor involved_in IMP
IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21771332)
Ensembl
UniProt
RGD
PMID:21771332 PMID:12393625 GO_REF:0000024 GO_REF:0000107, RGD:729241 NCBI chr 5:121,409,735...121,593,201 JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO MGI:3608889 (PMID:16556914) RGD PMID:16556914 NCBI chr 5:51,149,524...51,212,012 JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177832 (PMID:10973481)
Ensembl
RGD
PMID:10973481 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294 JBrowse link
G Mcam melanoma cell adhesion molecule acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:23878390)
GO_REF:0000033
RGD
GO_Central
PMID:23878390 GO_REF:0000033 NCBI chr 8:44,479,391...44,487,575 JBrowse link
G Med1 mediator complex subunit 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:11724781)
UniProt
RGD
PMID:11724781 GO_REF:0000024 NCBI chr10:83,641,851...83,685,560 JBrowse link
G Meis1 Meis homeobox 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3029063 (PMID:14713950)
GO_Central
RGD
PMID:14713950 GO_REF:0000033 NCBI chr14:93,155,426...93,294,373 JBrowse link
G Meis3 Meis homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:76,861,267...76,872,691 JBrowse link
G Meox2 mesenchyme homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2674242 (PMID:16116430)
Ensembl
RGD
PMID:16116430 GO_REF:0000107 NCBI chr 6:53,856,760...53,917,467 JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:142,474,027...142,489,431 JBrowse link
G Minar2 membrane integral NOTCH2 associated receptor 2 involved_in ISO (PMID:35727972) RGD PMID:35727972 NCBI chr18:52,539,714...52,554,465 JBrowse link
G Mir126b microRNA 126b acts_upstream_of_or_within ISO MGI:109484 (PMID:29118970) RGD PMID:29118970 NCBI chr 3:9,415,087...9,415,159 JBrowse link
G Mmp14 matrix metallopeptidase 14 IEP RGD PMID:14766216 RGD:1582561 NCBI chr15:27,887,795...27,897,020 JBrowse link
G Mmp2 matrix metallopeptidase 2 IEP RGD PMID:12234794 RGD:625663 NCBI chr19:30,327,643...30,355,856 JBrowse link
G Mmrn2 multimerin 2 involved_in ISO (PMID:31138217) RGD PMID:31138217 NCBI chr16:9,705,925...9,727,405 JBrowse link
G Myh9 myosin, heavy chain 9 involved_in ISO
ISS
(PMID:16403913)
GO_REF:0000024
RGD
UniProt
PMID:16403913 GO_REF:0000024 NCBI chr 7:111,224,291...111,304,963 JBrowse link
G Ncl nucleolin involved_in ISO
IEA
(PMID:16403913)
GO_REF:0000107
RGD
Ensembl
PMID:16403913 GO_REF:0000107 NCBI chr 9:94,447,559...94,456,083 JBrowse link
G Ndnf neuron-derived neurotrophic factor involved_in ISO (PMID:24706764) RGD PMID:24706764 NCBI chr 4:94,944,392...94,981,871 JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO MGI:108520|MGI:4414644 (PMID:27823583) RGD PMID:27823583 NCBI chr  X:5,796,487...5,820,934 JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:95516 (PMID:16648142)
Ensembl
RGD
PMID:16648142 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086 JBrowse link
G Ninj1 ninjurin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:15,659,208...15,668,115 JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857229 (PMID:15016731)
Ensembl
RGD
PMID:15016731 GO_REF:0000107 NCBI chr 4:11,686,088...11,706,604 JBrowse link
G Notch1 notch receptor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:29,676,040...29,721,613 JBrowse link
G Nox1 NADPH oxidase 1 involved_in ISO
IEA
(PMID:11805326)
GO_REF:0000107
RGD
Ensembl
PMID:11805326 GO_REF:0000107 NCBI chr  X:97,279,058...97,332,291 JBrowse link
G Nppc natriuretic peptide C involved_in ISO MGI:5660304 (PMID:30586761) RGD PMID:30586761 NCBI chr 9:94,767,986...94,772,186 JBrowse link
G Npr3 natriuretic peptide receptor 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:30586761)
Ensembl
RGD
PMID:30586761 GO_REF:0000107 NCBI chr 2:60,865,483...60,933,432 JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of ISO MGI:2176560 (PMID:16424942) RGD PMID:16424942 NCBI chr20:46,050,134...46,071,257 JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in ISO (PMID:11866539) RGD PMID:11866539 NCBI chr 6:61,402,813...61,698,536 JBrowse link
G Nrp1 neuropilin 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:23639442)
UniProtKB:O14786 (PMID:23639442), (PMID:24401374)
GO_REF:0000043
MGI:1857853|MGI:2450311|MGI:3512101 (PMID:12852851), (PMID:15376331)
RGD
UniProt
PMID:12852851 PMID:15376331 PMID:23639442 PMID:24401374 GO_REF:0000043 NCBI chr19:73,256,557...73,411,705 JBrowse link
G Nrp2 neuropilin 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:71,616,602...71,731,869 JBrowse link
G Nrxn1 neurexin 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 6:3,177,788...4,323,848 JBrowse link
G Nrxn3 neurexin 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:107,641,760...109,272,849 JBrowse link
G Optc opticin acts_upstream_of ISO MGI:5462239 (PMID:22159013) RGD PMID:22159013 NCBI chr13:45,353,954...45,368,254 JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3777011 (PMID:17573777) RGD PMID:17573777 NCBI chr 3:131,677,391...131,707,123 JBrowse link
G Pank2 pantothenate kinase 2 involved_in ISO (PMID:30221726) RGD PMID:30221726 NCBI chr 3:138,936,448...138,974,196 JBrowse link
G Pdcd10 programmed cell death 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:160,303,465...160,346,086 JBrowse link
G Pdcd6 programmed cell death 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:28,966,518...28,982,188 JBrowse link
G Pdcl3 phosducin-like 3 involved_in ISO
IBA
IEA
(PMID:26059764)
GO_REF:0000033
GO_REF:0000043
GO_REF:0000107
RGD
GO_Central
UniProt
Ensembl
PMID:26059764 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr 9:48,730,083...48,738,554 JBrowse link
G Pde3b phosphodiesterase 3B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:168,606,762...168,770,078 JBrowse link
G Pdgfa platelet derived growth factor subunit A involved_in
acts_upstream_of_or_within
ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:12101409)
UniProt
GO_Central
Ensembl
RGD
PMID:12101409 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr12:15,645,549...15,667,056 JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:113,419,882...113,438,343 JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:56,770,348...56,809,228 JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2677448 (PMID:17563397) RGD PMID:17563397 NCBI chr10:92,090,263...92,152,002 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:117,103,643...117,177,411 JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3530910 (PMID:16847320)
GO_Central
RGD
PMID:16847320 GO_REF:0000033 NCBI chr20:9,662,866...9,705,030 JBrowse link
G Plau plasminogen activator, urokinase IMP RGD PMID:15854129 RGD:1581926 NCBI chr15:3,505,485...3,511,987 JBrowse link
G Plcd1 phospholipase C, delta 1 acts_upstream_of_or_within ISO MGI:107451 (PMID:16314520) RGD PMID:16314520 NCBI chr 8:118,795,196...118,818,186 JBrowse link
G Plcd3 phospholipase C, delta 3 acts_upstream_of_or_within ISO MGI:97614 (PMID:16314520) RGD PMID:16314520 NCBI chr10:88,026,707...88,048,080 JBrowse link
G Plxnd1 plexin D1 involved_in ISO (PMID:18992737) RGD PMID:18992737 NCBI chr 4:149,002,786...149,043,097 JBrowse link
G Pnpla6 patatin-like phospholipase domain containing 6 acts_upstream_of_or_within ISO MGI:3028797 (PMID:14749382) RGD PMID:14749382 NCBI chr12:1,574,387...1,603,735 JBrowse link
G Pofut1 protein O-fucosyltransferase 1 acts_upstream_of_or_within ISO MGI:2662305 (PMID:12697902) RGD PMID:12697902 NCBI chr 3:141,708,618...141,735,558 JBrowse link
G Prkca protein kinase C, alpha involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:93,388,991...93,787,617 JBrowse link
G Prkd1 protein kinase D1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:73,460,640...73,774,433 JBrowse link
G Prkd2 protein kinase D2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:86,640,095...86,670,476 JBrowse link
G Prkx protein kinase cAMP-dependent X-linked catalytic subunit involved_in ISO (PMID:21684272) RGD PMID:21684272 NCBI chr  X:45,701,747...45,745,210 JBrowse link
G Prok1 prokineticin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:194,850,539...194,859,343 JBrowse link
G Prok2 prokineticin 2 involved_in ISO (PMID:12604792) RGD PMID:12604792 NCBI chr 4:132,346,681...132,361,754 JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO MGI:2136412|MGI:2182005 (PMID:16107612) RGD PMID:16107612 NCBI chr 1:240,043,707...240,110,330 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:21273371 RGD:5135049 NCBI chr13:64,714,063...64,722,320 JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000043
MGI:2137691|MGI:3583806 (PMID:15967814)
UniProt
RGD
PMID:15967814 GO_REF:0000043 NCBI chr 7:107,015,730...107,220,865 JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in IMP
IEA
GO_REF:0000043 UniProt
RGD
PMID:11739395 GO_REF:0000043, RGD:70597 NCBI chr15:44,536,275...44,656,754 JBrowse link
G Ptprb protein tyrosine phosphatase, receptor type, B involved_in IBA
ISO
GO_REF:0000033
(PMID:16514057), (PMID:17360632), (PMID:19451274)
GO_Central
RGD
PMID:16514057 PMID:17360632 PMID:19451274 GO_REF:0000033 NCBI chr 7:51,953,375...52,034,751 JBrowse link
G Pxdn peroxidasin acts_upstream_of ISO (PMID:29982533) RGD PMID:29982533 NCBI chr 6:46,580,749...46,658,345 JBrowse link
G Ramp1 receptor activity modifying protein 1 involved_in ISO
IEA
(PMID:20596610)
GO_REF:0000107
RGD
Ensembl
PMID:20596610 GO_REF:0000107 NCBI chr 9:99,213,031...99,263,696 JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:20596610)
UniProt
GO_Central
RGD
PMID:20596610 GO_REF:0000024 GO_REF:0000033 NCBI chr10:86,689,148...86,690,956 JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:128,875,772...128,898,203 JBrowse link
G Rasip1 Ras interacting protein 1 involved_in ISO
IBA
(PMID:19272373)
GO_REF:0000033
RGD
GO_Central
PMID:19272373 GO_REF:0000033 NCBI chr 1:105,233,599...105,246,028 JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:1857411 (PMID:15466160) RGD PMID:15466160 NCBI chr14:57,338,493...57,523,330 JBrowse link
G Rhob ras homolog family member B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:31,363,752...31,365,926 JBrowse link
G Rnf213 ring finger protein 213 involved_in ISO (PMID:26126547), (PMID:26278786) RGD PMID:26126547 PMID:26278786 NCBI chr10:105,154,873...105,254,148 JBrowse link
G Robo4 roundabout guidance receptor 4 involved_in IEA GO_REF:0000107
GO_REF:0000043
Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr 8:37,119,953...37,133,887 JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (PMID:18658046) RGD PMID:18658046 NCBI chr 8:78,182,710...78,915,730 JBrowse link
G Rspo3 R-spondin 3 acts_upstream_of_or_within ISO MGI:5609537 (PMID:18842812) RGD PMID:18842812 NCBI chr 1:28,283,914...28,368,661 JBrowse link
G Rtl1 retrotransposon-like 1 acts_upstream_of_or_within ISO MGI:3776873 (PMID:28111885) RGD PMID:28111885 NCBI chr 6:128,543,904...128,549,384 JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:15371328)
GO_Central
RGD
PMID:15371328 GO_REF:0000033 NCBI chr 2:206,309,715...206,314,070 JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 involved_in ISO (PMID:11866539) RGD PMID:11866539 NCBI chr  X:44,008,089...44,011,376 JBrowse link
G Scg2 secretogranin II involved_in ISO
IBA
IEA
ISS
(PMID:14970115)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
HGNC-UCL
PMID:14970115 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:80,803,074...80,808,646 JBrowse link
G Serpine1 serpin family E member 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:21119013)
(PMID:11866539)
Ensembl
RGD
PMID:11866539 PMID:21119013 GO_REF:0000107 NCBI chr12:25,237,977...25,248,356 JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (PMID:20133625) RGD PMID:20133625 NCBI chr 8:119,390,207...119,475,863 JBrowse link
G Shc1 SHC adaptor protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2384189 (PMID:10809671)
Ensembl
RGD
PMID:10809671 GO_REF:0000107 NCBI chr 2:177,135,649...177,147,257 JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796|MGI:95516 (PMID:16778080), (PMID:17187775) RGD PMID:16778080 PMID:17187775 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA
(PMID:20620956)
GO_REF:0000107
(PMID:22315447)
RGD
Ensembl
PMID:20620956 PMID:22315447 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000 JBrowse link
G Slc31a1 solute carrier family 31 member 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:35027734)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:35027734 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:75,814,744...75,844,241 JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:103559 (PMID:16895970)
GO_Central
RGD
PMID:16895970 GO_REF:0000033 NCBI chr 5:15,016,660...15,022,228 JBrowse link
G Sox18 SRY-box transcription factor 18 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:16882943)
MGI:107543 (PMID:16895970)
GO_REF:0000033
RGD
GO_Central
PMID:16882943 PMID:16895970 GO_REF:0000033 NCBI chr 3:168,785,488...168,787,290 JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:19906640) RGD PMID:19906640 NCBI chr 4:12,356,983...12,548,345 JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:97,106,455...97,132,197 JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:12,756,493...12,830,927 JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO MGI:1857254|MGI:2450311|MGI:2661471 (PMID:15677556), (PMID:9472016) RGD PMID:9472016 PMID:15677556 NCBI chr 5:128,586,776...128,600,976 JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179136 (PMID:11971873)
UniProt
RGD
PMID:11971873 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058 JBrowse link
G Tbx4 T-box transcription factor 4 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2663716 (PMID:12736212)
GO_Central
RGD
PMID:12736212 GO_REF:0000033 NCBI chr10:71,228,145...71,258,222 JBrowse link
G Tek TEK receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:7596437)
MGI:2159357 (PMID:9846489)
GO_Central
RGD
PMID:7596437 PMID:9846489 GO_REF:0000033 NCBI chr 5:114,722,815...114,849,535 JBrowse link
G Tgfa transforming growth factor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:14998491)
Ensembl
RGD
PMID:14998491 GO_REF:0000107 NCBI chr 4:120,175,549...120,258,342 JBrowse link
G Tgfbi transforming growth factor, beta induced involved_in ISO (PMID:11866539) RGD PMID:11866539 NCBI chr17:7,960,885...7,990,234 JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:2388050 (PMID:11285230) RGD PMID:11285230 NCBI chr 5:66,449,348...66,506,371 JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISS
ISO
GO_REF:0000024
(PMID:9576104)
UniProt
RGD
PMID:9576104 GO_REF:0000024 NCBI chr 8:53,286,396...53,291,541 JBrowse link
G Tmem100 transmembrane protein 100 acts_upstream_of_or_within ISO MGI:5432904|MGI:5432905 (PMID:22783020) RGD PMID:22783020 NCBI chr10:74,854,779...74,861,147 JBrowse link
G Tmem201 transmembrane protein 201 involved_in ISO (PMID:35311970) RGD PMID:35311970 NCBI chr 5:160,166,240...160,188,874 JBrowse link
G Tmem215 transmembrane protein 215 acts_upstream_of_or_within ISO (PMID:30370660) RGD PMID:30370660 NCBI chr 5:55,612,568...55,615,828 JBrowse link
G Tspan12 tetraspanin 12 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:50,313,768...50,389,246 JBrowse link
G Ubp1 upstream binding protein 1 acts_upstream_of_or_within ISO MGI:3052819 (PMID:15282311) RGD PMID:15282311 NCBI chr 8:113,869,771...113,915,625 JBrowse link
G Vash1 vasohibin 1 acts_upstream_of_or_within ISO (PMID:15467828) RGD PMID:15467828 NCBI chr 6:106,330,374...106,345,740 JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
TAS
IEA
ISO
IMP
GO_REF:0000043
MGI:1202890|MGI:1926815|MGI:1931048|MGI:2383985|MGI:2386592|MGI:2386595 (PMID:10617467), (PMID:12890722), (PMID:12975317), (PMID:14722611), (PMID:14998491), (PMID:15073147), (PMID:16778080), (PMID:17625068)
(PMID:11427521), (PMID:21771332)
UniProt
RGD
PMID:10617467 PMID:11427521 PMID:12890722 PMID:12975317 PMID:14722611 More... GO_REF:0000043, RGD:625593, RGD:1580552 NCBI chr 9:22,452,854...22,468,194 JBrowse link
G Vegfb vascular endothelial growth factor B IEP RGD PMID:12230324 RGD:1580574 NCBI chr 1:213,601,570...213,607,254 JBrowse link
G Vegfc vascular endothelial growth factor C IMP RGD PMID:12706123 RGD:1580593 NCBI chr16:44,445,293...44,560,887 JBrowse link
G Vegfd vascular endothelial growth factor D involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:30,073,122...30,108,413 JBrowse link
G Vezf1 vascular endothelial zinc finger 1 acts_upstream_of_or_within ISO MGI:3583268 (PMID:15882861) RGD PMID:15882861 NCBI chr10:73,341,666...73,373,320 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO MGI:2136645|MGI:2450311 (PMID:16537898) RGD PMID:16537898 NCBI chr 4:146,772,483...146,779,376 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B acts_upstream_of_or_within ISO (PMID:28675177) RGD PMID:28675177 NCBI chr13:22,907,105...22,932,200 JBrowse link
G Wars1 tryptophanyl-tRNA synthetase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:127,776,088...127,807,273 JBrowse link
G Wasf2 WASP family member 2 acts_upstream_of_or_within ISO MGI:2670134 (PMID:12879075) RGD PMID:12879075 NCBI chr 5:150,620,733...150,685,943 JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI:98962 (PMID:19129494) RGD PMID:19129494 NCBI chr 4:123,863,108...123,908,981 JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:2387443|MGI:98961 (PMID:19129494) RGD PMID:19129494 NCBI chr 7:118,514,684...118,559,316 JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23529610)
UniProt
Ensembl
RGD
PMID:23529610 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707 JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5562755 (PMID:29118970)
Ensembl
RGD
PMID:29118970 GO_REF:0000107 NCBI chr 7:69,826,404...69,848,702 JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:142,661,193...142,670,051 JBrowse link
G Zfp354c zinc finger protein 354C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:35,630,738...35,647,176 JBrowse link
angiogenesis involved in coronary vascular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme IMP RGD PMID:22123369 RGD:6893472 NCBI chr10:91,410,129...91,430,246 JBrowse link
G Fgf2 fibroblast growth factor 2 IMP RGD PMID:11397779 RGD:8655634 NCBI chr 2:122,164,454...122,218,796 JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:24401374) RGD PMID:24401374 NCBI chr19:73,256,557...73,411,705 JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:18718461)
Ensembl
RGD
PMID:18718461 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371 JBrowse link
G Vegfa vascular endothelial growth factor A IMP RGD PMID:11397779 RGD:8655634 NCBI chr 9:22,452,854...22,468,194 JBrowse link
angiogenesis involved in wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2450889 (PMID:15039218)
Ensembl
RGD
PMID:15039218 GO_REF:0000107 NCBI chr 5:55,935,614...55,982,461 JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3608773 (PMID:18097059)
GO_REF:0000107
RGD
Ensembl
PMID:18097059 GO_REF:0000107 NCBI chr19:10,233,326...10,244,856 JBrowse link
G Dag1 dystroglycan 1 IEP RGD PMID:21192954 RGD:11541061 NCBI chr 8:117,769,517...117,834,347 JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor IEP RGD PMID:9600079 RGD:2313680 NCBI chr 8:39,303,936...39,426,022 JBrowse link
G Gpr4 G protein-coupled receptor 4 acts_upstream_of_or_within ISO (PMID:17145776) RGD PMID:17145776 NCBI chr 1:78,865,376...78,877,126 JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158814 (PMID:16373599)
Ensembl
RGD
PMID:16373599 GO_REF:0000107 NCBI chr 8:117,905,462...117,906,588 JBrowse link
G Hpse heparanase involved_in IBA
ISO
GO_REF:0000033
(PMID:15793281)
GO_Central
RGD
PMID:15793281 GO_REF:0000033 NCBI chr14:9,200,971...9,241,377 JBrowse link
G Mir222 microRNA 222 IMP RGD PMID:27545451 RGD:151893485 NCBI chr  X:6,022,621...6,022,723 JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3795849 (PMID:25139353)
Ensembl
RGD
PMID:25139353 GO_REF:0000107 NCBI chr 8:108,474,017...108,579,140 JBrowse link
G Prcp prolylcarboxypeptidase involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4123993 (PMID:23744584)
GO_Central
RGD
PMID:23744584 GO_REF:0000033 NCBI chr 1:146,931,487...146,983,891 JBrowse link
G Stard13 StAR-related lipid transfer domain containing 13 NOT|acts_upstream_of_or_within ISO MGI:4363733 (PMID:20208559) RGD PMID:20208559 NCBI chr12:566,282...959,372 JBrowse link
animal organ formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3716756 (PMID:17317769)
Ensembl
RGD
PMID:17317769 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934 JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (PMID:11062007) RGD PMID:11062007 NCBI chr 2:50,801,171...50,878,218 JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16887115)
Ensembl
RGD
PMID:16887115 GO_REF:0000107 NCBI chr18:2,460,909...2,492,322 JBrowse link
G Hoxa3 homeobox A3 acts_upstream_of_or_within ISO MGI:1857992 (PMID:7635047) RGD PMID:7635047 NCBI chr 4:81,269,243...81,313,218 JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO MGI:1931319 (PMID:10449756) RGD PMID:10449756 NCBI chr14:69,183,795...69,186,182 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (PMID:15013801)
Ensembl
RGD
PMID:15013801 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Tlx1 T-cell leukemia, homeobox 1 acts_upstream_of_or_within ISO MGI:3581680 (PMID:11356032) RGD PMID:11356032 NCBI chr 1:244,005,057...244,011,318 JBrowse link
anterior neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 acts_upstream_of_or_within ISO MGI:5056374 (PMID:21515572) RGD PMID:21515572 NCBI chr16:52,395,539...52,413,794 JBrowse link
G Folr1 folate receptor alpha involved_in ISO (PMID:17286298) RGD PMID:17286298 NCBI chr 1:165,631,462...165,650,430 JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:5056365 (PMID:21515572) RGD PMID:21515572 NCBI chr 7:68,400,287...68,530,269 JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1-like acts_upstream_of_or_within ISO MGI:4124253|MGI:4128888 (PMID:26787558) RGD PMID:26787558 NCBI chr20:13,337,983...13,443,665 JBrowse link
anterior neuropore closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) RGD PMID:17565372 NCBI chr16:19,463,500...19,553,497 JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:1888387 (PMID:8622765) RGD PMID:8622765 NCBI chr17:24,230,064...24,253,219 JBrowse link
aortic valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh11 cadherin 11 involved_in ISO UniProtKB:P61586 (PMID:26188246) RGD PMID:26188246 NCBI chr19:2,148,447...2,305,754 JBrowse link
G Rhoa ras homolog family member A involved_in ISO
IEA
UniProtKB:F1RFU7 (PMID:26188246)
GO_REF:0000107
RGD
Ensembl
PMID:26188246 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303 JBrowse link
atrioventricular valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 involved_in ISO UniProtKB:P97471 (PMID:21330551) RGD PMID:21330551 NCBI chr15:41,635,572...41,707,252 JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:17259303) RGD PMID:17259303 NCBI chr 2:93,096,605...93,100,316 JBrowse link
G Olfm1 olfactomedin 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 3:11,520,522...11,558,240 JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q08369 (PMID:21330551)
Ensembl
RGD
PMID:21330551 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684 JBrowse link
axial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857546 (PMID:9230313)
Ensembl
RGD
PMID:9230313 GO_REF:0000107 NCBI chr10:15,163,477...15,215,615 JBrowse link
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:2448472 (PMID:11287184) RGD PMID:11287184 NCBI chr 5:158,888,629...158,917,100 JBrowse link
axial mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:14511481) RGD PMID:14511481 NCBI chr20:29,368,436...29,376,837 JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98956 (PMID:11029008) RGD PMID:11029008 NCBI chr 4:167,269,856...167,400,364 JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839484 (PMID:20630950) RGD PMID:20630950 NCBI chr  X:66,404,807...66,427,775 JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1298218 (PMID:11029008) RGD PMID:11029008 NCBI chr10:44,533,734...44,577,919 JBrowse link
blastocyst formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 2:117,413,206...117,436,758 JBrowse link
G Bysl bystin-like acts_upstream_of_or_within ISO (PMID:17242206) RGD PMID:17242206 NCBI chr 9:13,382,806...13,392,557 JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within ISO MGI:3050548 (PMID:17784788) RGD PMID:17784788 NCBI chr15:24,014,905...24,031,357 JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q61139 (PMID:26416966)
Ensembl
RGD
PMID:26416966 GO_REF:0000107 NCBI chr 1:143,757,389...143,770,430 JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr11:23,888,586...23,917,612 JBrowse link
G Kdm4c lysine demethylase 4C acts_upstream_of_or_within ISO (PMID:19696013) RGD PMID:19696013 NCBI chr 5:88,100,710...88,306,821 JBrowse link
G Matr3 matrin 3 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr18:27,428,190...27,474,421 JBrowse link
G Mfn2 mitofusin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16083859)
Ensembl
RGD
PMID:16083859 GO_REF:0000107 NCBI chr 5:158,304,285...158,335,502 JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 7:110,310,810...110,328,653 JBrowse link
G Mxi1 MAX interactor 1, dimerization protein acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:252,323,915...252,383,682 JBrowse link
G Nop2 NOP2 nucleolar protein acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 4:157,932,731...157,944,462 JBrowse link
G Pbrm1 polybromo 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr16:6,219,933...6,319,336 JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:47,843,224...47,861,675 JBrowse link
G Ptpn18 protein tyrosine phosphatase, non-receptor type 18 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 9:36,672,325...36,689,963 JBrowse link
G Rpl7l1 ribosomal protein L7-like 1 acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 9:14,198,101...14,206,119 JBrowse link
G Rrp7a ribosomal RNA processing 7 homolog A acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 7:116,142,976...116,152,874 JBrowse link
G Rtn4 reticulon 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27869233)
Ensembl
RGD
PMID:27869233 GO_REF:0000107 NCBI chr14:103,450,074...103,497,687 JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 9:56,492,403...56,532,300 JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 6:33,545,495...33,554,537 JBrowse link
G Skil SKI-like proto-oncogene acts_upstream_of_or_within ISO MGI:2387096 (PMID:10811619) RGD PMID:10811619 NCBI chr 2:114,175,534...114,203,663 JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr10:63,103,920...63,140,780 JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO MGI:3763362 (PMID:18804437) RGD PMID:18804437 NCBI chr 4:161,474,122...161,572,837 JBrowse link
G Tjp1 tight junction protein 1 acts_upstream_of_or_within ISO (PMID:18423437) RGD PMID:18423437 NCBI chr 1:128,260,330...128,505,018 JBrowse link
G Tm4sf1 transmembrane 4 L six family member 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 2:141,456,950...141,466,146 JBrowse link
G Txnrd3 thioredoxin reductase 3 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 4:122,072,548...122,112,493 JBrowse link
G Uspl1 ubiquitin specific peptidase like 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr12:5,823,460...5,850,470 JBrowse link
G Wdr74 WD repeat domain 74 acts_upstream_of_or_within ISO (PMID:21799883), (PMID:27869233) RGD PMID:21799883 PMID:27869233 NCBI chr 1:205,631,769...205,636,558 JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:20382503)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20382503 GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,690,547...20,697,513 JBrowse link
blood vessel endothelial cell migration involved in intussusceptive angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO MGI:3703328 (PMID:16943282) RGD PMID:16943282 NCBI chr 7:56,415,053...56,499,047 JBrowse link
blood vessel endothelial cell proliferation involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18787191)
UniProt
Ensembl
RGD
PMID:18787191 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Bmper BMP-binding endothelial regulator involved_in ISO (PMID:18787191) RGD PMID:18787191 NCBI chr 8:30,008,049...30,253,201 JBrowse link
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:3040415 (PMID:19443703) RGD PMID:19443703 NCBI chr 5:158,888,629...158,917,100 JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (PMID:20616313) RGD PMID:20616313 NCBI chr 6:46,549,994...46,564,735 JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3833551 (PMID:19154719)
GO_REF:0000033
RGD
GO_Central
PMID:19154719 GO_REF:0000033 NCBI chr 3:28,390,745...28,393,299 JBrowse link
G Sema5a semaphorin 5A involved_in ISS
ISO
GO_REF:0000024
(PMID:19850054)
UniProt
RGD
PMID:19850054 GO_REF:0000024 NCBI chr 2:83,309,843...83,741,084 JBrowse link
bone trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO MGI:97009 (PMID:17440987) RGD PMID:17440987 NCBI chr10:80,380,458...80,397,461 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079 (PMID:22359666) RGD PMID:22359666 NCBI chr 1:22,518,051...22,583,044 JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (PMID:20855508) RGD PMID:20855508 NCBI chr18:51,499,670...51,703,976 JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88467 (PMID:17440987)
Ensembl
RGD
PMID:17440987 GO_REF:0000107 NCBI chr19:30,327,643...30,355,856 JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926381 (PMID:10742104)
Ensembl
RGD
PMID:10742104 GO_REF:0000107 NCBI chr17:11,097,214...11,102,879 JBrowse link
G Ppargc1b PPARG coactivator 1 beta involved_in IEA
ISO
GO_REF:0000107
(PMID:19252502)
Ensembl
RGD
PMID:19252502 GO_REF:0000107 NCBI chr18:54,758,891...54,861,103 JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3045799 (PMID:14976225)
Ensembl
RGD
PMID:14976225 GO_REF:0000107 NCBI chr16:75,278,325...75,316,736 JBrowse link
G Thbs3 thrombospondin 3 acts_upstream_of_or_within ISO MGI:3581964 (PMID:15964815) RGD PMID:15964815 NCBI chr 2:176,919,549...176,931,357 JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931048 (PMID:22886301) RGD PMID:22886301 NCBI chr 9:22,452,854...22,468,194 JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (PMID:15728361) RGD PMID:15728361 NCBI chr 7:129,922,088...129,927,892 JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO MGI:2386570|MGI:2651395 (PMID:17078885) RGD PMID:17078885 NCBI chr 3:63,387,378...63,506,980 JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (PMID:10973493) RGD PMID:10973493 NCBI chr 6:57,961,423...57,998,901 JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:20818663) RGD PMID:20818663 NCBI chr16:84,885,597...84,996,482 JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1858008|MGI:2148567 (PMID:12975353), (PMID:19154719)
Ensembl
RGD
PMID:12975353 PMID:19154719 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO MGI:1934384 (PMID:15626744) RGD PMID:15626744 NCBI chr 4:152,060,781...152,073,628 JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO MGI:1934442 (PMID:15626744) RGD PMID:15626744 NCBI chr13:42,630,383...42,634,288 JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:15466159)
Ensembl
RGD
PMID:15466159 GO_REF:0000107 NCBI chr 3:126,770,945...126,780,769 JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within
involved_in
ISO MGI:1857637 (PMID:7615798)
MGI:1857637 (PMID:23933587)
RGD PMID:7615798 PMID:23933587 NCBI chr17:22,660,799...22,666,687 JBrowse link
G Ednra endothelin receptor type A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3773698|MGI:4867385 (PMID:23933587)
MGI:1347481 (PMID:15664398)
Ensembl
RGD
PMID:15664398 PMID:23933587 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961 JBrowse link
G Eng endoglin involved_in ISO (PMID:10348742) RGD PMID:10348742 NCBI chr 3:36,332,190...36,370,324 JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:95668 (PMID:15996652) RGD PMID:15996652 NCBI chr 1:244,584,477...244,590,578 JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO MGI:1857717 (PMID:14982871) RGD PMID:14982871 NCBI chr12:12,333,050...12,504,750 JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:105923 (PMID:15664398) RGD PMID:15664398 NCBI chr19:66,094,718...66,097,420 JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634|MGI:99604 (PMID:15996652) RGD PMID:15996652 NCBI chr 9:90,509,633...90,512,212 JBrowse link
G Gdf2 growth differentiation factor 2 involved_in ISO (PMID:20406889) RGD PMID:20406889 NCBI chr16:9,255,430...9,261,429 JBrowse link
G Gna13 G protein subunit alpha 13 acts_upstream_of_or_within ISO MGI:2450311|MGI:3583876 (PMID:15919816) RGD PMID:15919816 NCBI chr10:94,837,271...94,870,290 JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (PMID:15689378) RGD PMID:15689378 NCBI chr 9:76,504,315...76,510,532 JBrowse link
G Kdr kinase insert domain receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23688497)
Ensembl
RGD
PMID:23688497 GO_REF:0000107 NCBI chr14:32,572,031...32,615,204 JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926601 (PMID:19154719)
Ensembl
RGD
PMID:19154719 GO_REF:0000107 NCBI chr 2:222,340,541...222,453,931 JBrowse link
G Mir15b microRNA 15b acts_upstream_of ISO (PMID:23688497) RGD PMID:23688497 NCBI chr 2:153,245,200...153,245,297 JBrowse link
G Mir16-2 microRNA 16-2 acts_upstream_of ISO (PMID:23083510) RGD PMID:23083510 NCBI chr 2:153,245,349...153,245,443 JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO MGI:1920431 (PMID:11439183) RGD PMID:11439183 NCBI chr19:50,870,464...50,944,992 JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 acts_upstream_of_or_within ISO MGI:103296 (PMID:11439183) RGD PMID:11439183 NCBI chr15:33,256,912...33,284,522 JBrowse link
G Notch4 notch receptor 4 involved_in ISO (PMID:11344305) RGD PMID:11344305 NCBI chr20:4,160,362...4,184,466 JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3833551 (PMID:19154719)
GO_REF:0000033
RGD
GO_Central
PMID:19154719 GO_REF:0000033 NCBI chr 3:28,390,745...28,393,299 JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within
involved_in
ISO MGI:3512099 (PMID:17428830)
(PMID:21852397), (PMID:23315162), (PMID:24401374)
RGD PMID:17428830 PMID:21852397 PMID:23315162 PMID:24401374 NCBI chr19:73,256,557...73,411,705 JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:2445428 (PMID:12397115) RGD PMID:12397115 NCBI chr 2:220,391,417...220,411,588 JBrowse link
G Plxnd1 plexin D1 acts_upstream_of_or_within ISO MGI:3050678|MGI:5544786 (PMID:15239958), (PMID:23918385) RGD PMID:15239958 PMID:23918385 NCBI chr 4:149,002,786...149,043,097 JBrowse link
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha acts_upstream_of_or_within ISO MGI:3043986 (PMID:11439183) RGD PMID:11439183 NCBI chr14:95,758,333...95,808,015 JBrowse link
G Rbm15 RNA binding motif protein 15 acts_upstream_of_or_within ISO MGI:3706995 (PMID:18981216) RGD PMID:18981216 NCBI chr 2:197,634,174...197,642,697 JBrowse link
G Sema3e semaphorin 3E involved_in ISO (PMID:15550623) RGD PMID:15550623 NCBI chr 4:20,297,534...20,555,287 JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO MGI:3577050 (PMID:15743826) RGD PMID:15743826 NCBI chr 2:83,309,843...83,741,084 JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO (PMID:19458075) RGD PMID:19458075 NCBI chr 2:169,089,517...169,097,064 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1857796 (PMID:15936751)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15936751 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:18804439) RGD PMID:18804439 NCBI chr 9:21,924,050...21,933,338 JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO MGI:1928487 (PMID:19786569) RGD PMID:19786569 NCBI chr 3:173,165,238...173,247,135 JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within ISO MGI:3579836 (PMID:15843414) RGD PMID:15843414 NCBI chr 8:23,200,104...23,258,218 JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2384513|MGI:2386570 (PMID:17078885)
Ensembl
RGD
PMID:17078885 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741 JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23688497)
GO_REF:0000107
(PMID:23083510), (PMID:23688497)
RGD
Ensembl
PMID:23083510 PMID:23688497 GO_REF:0000107 NCBI chr 9:22,452,854...22,468,194 JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:2181762 (PMID:19233265) RGD PMID:19233265 NCBI chr18:76,321,386...76,430,997 JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 involved_in ISO (PMID:20223757) RGD PMID:20223757 NCBI chr 5:137,285,408...137,305,047 JBrowse link
cardiac atrium formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16730346)
Ensembl
RGD
PMID:16730346 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416 JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (PMID:18297060) RGD PMID:18297060 NCBI chr 1:143,147,671...143,149,189 JBrowse link
cardiac chamber formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednra endothelin receptor type A involved_in IEA
ISO
GO_REF:0000107
MGI:3773698|MGI:4867385 (PMID:20929948)
Ensembl
RGD
PMID:20929948 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961 JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:20890042) RGD PMID:20890042 NCBI chr 3:29,676,040...29,721,613 JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within
involved_in
ISO MGI:3580099 (PMID:19661464)
(PMID:15901664)
RGD PMID:15901664 PMID:19661464 NCBI chr 8:23,200,104...23,258,218 JBrowse link
cardiac left ventricle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 involved_in ISO (PMID:18276607) RGD PMID:18276607 NCBI chr10:42,006,646...42,009,213 JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO
IBA
GO_REF:0000107
(PMID:19727199)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:19727199 GO_REF:0000033 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723 JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neb nebulin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:36,613,677...36,811,618 JBrowse link
G Nebl nebulette involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:11822876), (PMID:18823973)
UniProt
GO_Central
RGD
PMID:11822876 PMID:18823973 GO_REF:0000024 GO_REF:0000033 NCBI chr17:85,022,953...85,374,848 JBrowse link
G Nrap nebulin-related anchoring protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:255,350,113...255,427,704 JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 acts_upstream_of_or_within ISO MGI:2180072 (PMID:9114002) RGD PMID:9114002 NCBI chr 3:100,811,987...100,817,523 JBrowse link
G Adprhl1 ADP-ribosylhydrolase like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr16:76,283,186...76,315,075 JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:12507422)
Ensembl
RGD
PMID:12507422 GO_REF:0000107 NCBI chr 1:98,528,067...98,546,647 JBrowse link
G Fhod3 formin homology 2 domain containing 3 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5440613 (PMID:23213483)
GO_Central
RGD
PMID:23213483 GO_REF:0000033 NCBI chr18:15,993,079...16,425,796 JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386445 (PMID:9356462) RGD PMID:9356462 NCBI chr10:53,393,901...53,525,174 JBrowse link
G Myl2 myosin light chain 2 acts_upstream_of_or_within ISO MGI:2385922 (PMID:9422794) RGD PMID:9422794 NCBI chr12:34,454,223...34,468,554 JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in IMP
IBA
PMID:17885681
GO_REF:0000033
GO_Central PMID:17885681 GO_REF:0000033, RGD:8554371 NCBI chr19:37,858,298...37,916,805 JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in IEA
ISO
ISS
GO_REF:0000107
UniProtKB:P05622 (PMID:11239463)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11239463 GO_REF:0000024 GO_REF:0000107 NCBI chr14:33,360,027...33,408,604 JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO
GO_REF:0000024
UniProtKB:P26618 (PMID:11239463)
UniProt
RGD
PMID:11239463 GO_REF:0000024 NCBI chr18:56,770,348...56,809,228 JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:3522206|MGI:3522214 (PMID:15569937) RGD PMID:15569937 NCBI chr 9:21,924,050...21,933,338 JBrowse link
G Tcap titin-cap involved_in ISO
IBA
(PMID:9817758)
GO_REF:0000033
RGD
GO_Central
PMID:9817758 GO_REF:0000033 NCBI chr10:83,381,719...83,382,887 JBrowse link
G Ttn titin involved_in
acts_upstream_of_or_within
ISO (PMID:11846417), (PMID:9817758)
MGI:3654306 (PMID:16702235)
RGD PMID:9817758 PMID:11846417 PMID:16702235 NCBI chr 3:82,059,648...82,332,130 JBrowse link
cardiac right ventricle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 involved_in ISO (PMID:18276607) RGD PMID:18276607 NCBI chr10:42,006,646...42,009,213 JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:11076755)
Ensembl
RGD
PMID:11076755 GO_REF:0000107 NCBI chr16:37,928,145...37,931,488 JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1933835|MGI:2447758 (PMID:19620969) RGD PMID:19620969 NCBI chr 3:29,676,040...29,721,613 JBrowse link
G Smarcd3 SWI/SNF related BAF chromatin remodeling complex subunit D3 acts_upstream_of_or_within ISO MGI:2148567 (PMID:17519332) RGD PMID:17519332 NCBI chr 4:11,441,142...11,472,781 JBrowse link
cardiac ventricle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within
involved_in
ISO MGI:97350 (PMID:19035347)
(PMID:16680724)
RGD PMID:16680724 PMID:19035347 NCBI chr 2:15,708,732...15,871,639 JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (PMID:18297060) RGD PMID:18297060 NCBI chr 1:143,147,671...143,149,189 JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:99458 (PMID:19035347)
Ensembl
RGD
PMID:19035347 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458 JBrowse link
cardioblast anterior-lateral migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (PMID:10393122) RGD PMID:10393122 NCBI chr 1:143,147,671...143,149,189 JBrowse link
cardioblast migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2182080 (PMID:10393122) RGD PMID:10393122 NCBI chr 1:143,147,671...143,149,189 JBrowse link
cardioblast migration to the midline involved in heart field formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (PMID:10393122) RGD PMID:10393122 NCBI chr 1:143,147,671...143,149,189 JBrowse link
cell adhesion involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtn4 reticulon 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:15034570)
UniProt
RGD
PMID:15034570 GO_REF:0000024 NCBI chr14:103,450,074...103,497,687 JBrowse link
cell fate commitment involved in formation of primary germ layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) RGD PMID:19736317 NCBI chr20:3,227,836...3,232,598 JBrowse link
cell migration involved in coronary angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO
GO_REF:0000024
(PMID:14624252)
UniProt
RGD
PMID:14624252 GO_REF:0000024 NCBI chr18:56,770,348...56,809,228 JBrowse link
cell migration involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dchs1 dachsous cadherin-related 1 involved_in ISO (PMID:26258302) RGD PMID:26258302 NCBI chr 1:160,104,931...160,138,958 JBrowse link
G Eng endoglin acts_upstream_of_or_within ISO MGI:2177824 (PMID:19703439) RGD PMID:19703439 NCBI chr 3:36,332,190...36,370,324 JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:20890042) RGD PMID:20890042 NCBI chr 3:29,676,040...29,721,613 JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:18663143) RGD PMID:18663143 NCBI chr11:99,686,934...99,690,349 JBrowse link
cell migration involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO (PMID:28341552) RGD PMID:28341552 NCBI chr17:22,907,758...22,993,834 JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA
(PMID:28341552)
GO_REF:0000107
RGD
Ensembl
PMID:28341552 GO_REF:0000107 NCBI chr 6:137,534,810...137,555,131 JBrowse link
G Clec14a C-type lectin domain containing 14A involved_in ISO MGI:5292853 (PMID:25745997) RGD PMID:25745997 NCBI chr 6:75,881,470...75,884,612 JBrowse link
G Cripto cripto, EGF-CFC family member involved_in ISO (PMID:17720976) RGD PMID:17720976 NCBI chr 8:110,924,774...110,938,545 JBrowse link
G Efnb2 ephrin B2 involved_in ISO (PMID:12734395) RGD PMID:12734395 NCBI chr16:80,783,389...80,827,420 JBrowse link
G Egr3 early growth response 3 involved_in ISO
IEA
(PMID:18059339)
GO_REF:0000107
RGD
Ensembl
PMID:18059339 GO_REF:0000107 NCBI chr15:51,560,482...51,565,778 JBrowse link
G Ephb4 EPH receptor B4 involved_in ISO (PMID:12734395) RGD PMID:12734395 NCBI chr12:24,963,174...24,988,473 JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO UniProtKB:Q9UQL6 (PMID:18059339), (PMID:19351956) RGD PMID:18059339 PMID:19351956 NCBI chr 2:122,164,454...122,218,796 JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17720976)
UniProt
Ensembl
RGD
PMID:17720976 GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,084,427...40,132,035 JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:17077323), (PMID:20660291) RGD PMID:17077323 PMID:20660291 NCBI chr 3:100,512,317...100,524,001 JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16424942)
Ensembl
RGD
PMID:16424942 GO_REF:0000107 NCBI chr19:73,602,277...73,650,271 JBrowse link
G Kdr kinase insert domain receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:20660291)
Ensembl
RGD
PMID:20660291 GO_REF:0000107 NCBI chr14:32,572,031...32,615,204 JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 involved_in ISO (PMID:28341552) RGD PMID:28341552 NCBI chr13:94,970,421...95,012,071 JBrowse link
G Mmrn2 multimerin 2 involved_in ISO (PMID:25745997) RGD PMID:25745997 NCBI chr16:9,705,925...9,727,405 JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 involved_in ISO (PMID:18059339) RGD PMID:18059339 NCBI chr 7:132,368,399...132,389,300 JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:23315162) RGD PMID:23315162 NCBI chr19:73,256,557...73,411,705 JBrowse link
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 involved_in ISO
IEA
UniProtKB:P31749|UniProtKB:Q96IZ2 (PMID:28341552)
GO_REF:0000107
RGD
Ensembl
PMID:28341552 GO_REF:0000107 NCBI chr 5:134,936,790...135,009,303 JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO UniProtKB:Q9UQL6 (PMID:19351956) RGD PMID:19351956 NCBI chr11:24,067,869...25,108,694 JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO
IEA
(PMID:19351956)
GO_REF:0000107
RGD
Ensembl
PMID:19351956 GO_REF:0000107 NCBI chr14:66,829,661...67,168,517 JBrowse link
G Srf serum response factor involved_in
acts_upstream_of_or_within
ISO (PMID:15180964)
(PMID:18804439)
RGD PMID:15180964 PMID:18804439 NCBI chr 9:21,924,050...21,933,338 JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IEA
ISO
GO_REF:0000107
(PMID:20660291)
Ensembl
RGD
PMID:20660291 GO_REF:0000107 NCBI chr 9:22,452,854...22,468,194 JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptbn1 spectrin, beta, non-erythrocytic 1 involved_in ISO (PMID:34211179) RGD PMID:34211179 NCBI chr14:103,841,713...104,016,900 JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within
IDA
ISO
PMID:12210128
(PMID:17060448)
RGD PMID:17060448 PMID:12210128 RGD:631995 NCBI chr 3:28,642,660...28,662,689 JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO MGI:3051635|MGI:5570192 (PMID:28063167) RGD PMID:28063167 NCBI chr 3:97,946,966...98,049,050 JBrowse link
G Cntn1 contactin 1 involved_in IEA
ISO
GO_REF:0000107
MGI:96912 (PMID:31641127)
Ensembl
RGD
PMID:31641127 GO_REF:0000107 NCBI chr 7:123,263,146...123,560,896 JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (PMID:17952069) RGD PMID:17952069 NCBI chr 1:88,161,342...88,175,102 JBrowse link
G Mag myelin-associated glycoprotein involved_in ISO MGI:105980 (PMID:31641127) RGD PMID:31641127 NCBI chr 1:86,148,227...86,163,726 JBrowse link
G Mios meiosis regulator for oocyte development involved_in ISO (PMID:35022234) RGD PMID:35022234 NCBI chr 4:37,229,533...37,255,862 JBrowse link
G Mobp myelin-associated oligodendrocyte basic protein IEP RGD PMID:9306245 RGD:27226697 NCBI chr 8:119,869,504...119,899,605 JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in ISO (PMID:26188006)
(PMID:22915103)
RGD PMID:22915103 PMID:26188006 NCBI chr 1:149,895,097...151,263,315 JBrowse link
G Tlr2 toll-like receptor 2 IDA RGD PMID:21971760 RGD:7241097 NCBI chr 2:171,499,189...171,504,831 JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861809 (PMID:10407039)
Ensembl
RGD
PMID:10407039 GO_REF:0000107 NCBI chr 4:11,647,098...11,651,606 JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:99511 (PMID:24431450)
Ensembl
RGD
PMID:24431450 GO_REF:0000107 NCBI chr 8:73,578,747...73,650,184 JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346866|MGI:4868451 (PMID:24431450)
Ensembl
RGD
PMID:24431450 GO_REF:0000107 NCBI chr12:41,026,079...41,085,577 JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (PMID:9668038) RGD PMID:9668038 NCBI chr 4:146,894,602...147,208,060 JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q61625 (PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 NCBI chr19:19,608,763...19,612,572 JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q9R171 (PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 NCBI chr 4:92,415,019...93,892,472 JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (PMID:17984326) RGD PMID:17984326 NCBI chr 1:194,689,962...194,738,353 JBrowse link
G Mtpn myotrophin IEP RGD PMID:8144589 RGD:632797 NCBI chr 4:64,159,273...64,186,686 JBrowse link
G Nfix nuclear factor I X involved_in
acts_upstream_of_or_within
ISO MGI:3802571 (PMID:23042739)
MGI:3802571 (PMID:21800304)
RGD PMID:21800304 PMID:23042739 NCBI chr19:23,355,388...23,450,360 JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q61625|UniProtKB:Q9R171 (PMID:20537373)
BHF-UCL
RGD
PMID:20537373 GO_REF:0000024 NCBI chr 6:3,177,788...4,323,848 JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) RGD PMID:27160703 NCBI chr  X:63,599,746...63,976,678 JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:20808958) RGD PMID:20808958 NCBI chr13:104,196,615...104,251,007 JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:84,441,954...84,473,093 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) RGD PMID:10624947 NCBI chr12:51,511,492...51,537,746 JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (PMID:9405095) RGD PMID:9405095 NCBI chr 4:123,863,108...123,908,981 JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:23688253)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23688253 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:64,985,161...64,993,274 JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within
involved_in
ISO MGI:1856535|MGI:1857523|MGI:2443047|MGI:6270378 (PMID:10630211), (PMID:30420556)
(PMID:11884758), (PMID:16465590), (PMID:21074048)
RGD PMID:10630211 PMID:11884758 PMID:16465590 PMID:21074048 PMID:30420556 NCBI chr17:5,120,540...5,238,874 JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (PMID:9668038) RGD PMID:9668038 NCBI chr 4:146,894,602...147,208,060 JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856466 (PMID:2473662) RGD PMID:2473662 NCBI chr  X:75,159,635...75,267,094 JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within ISO MGI:3505741 (PMID:10973246) RGD PMID:10973246 NCBI chr12:40,413,657...40,509,895 JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (PMID:10630211), (PMID:1306163), (PMID:7834360) RGD PMID:1306163 PMID:7834360 PMID:10630211 NCBI chr19:40,425,560...40,724,810 JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4831137 (PMID:20153830)
GO_Central
RGD
PMID:20153830 GO_REF:0000033 NCBI chr 1:205,954,713...205,957,710 JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21957071)
UniProt
Ensembl
RGD
PMID:21957071 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:130,632,368...130,659,353 JBrowse link
G Foxp2 forkhead box P2 involved_in ISO MGI:3778383 (PMID:22133810) RGD PMID:22133810 NCBI chr 4:44,099,848...44,677,700 JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:3613033 (PMID:20041218) RGD PMID:20041218 NCBI chr 8:75,796,347...75,965,347 JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:3719683 (PMID:17664423) RGD PMID:17664423 NCBI chr 1:244,864,168...244,890,007 JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:107792 (PMID:17664423)
UniProt
RGD
PMID:17664423 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617 JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (PMID:17664423) RGD PMID:17664423 NCBI chr12:36,126,186...36,134,625 JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:3521746 (PMID:15345707) RGD PMID:15345707 NCBI chr20:28,756,951...28,783,422 JBrowse link
G Rora RAR-related orphan receptor A acts_upstream_of_or_within ISO MGI:1857035 (PMID:8996814) RGD PMID:8996814 NCBI chr 8:78,182,710...78,915,730 JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (PMID:21937600), (PMID:24491816) RGD PMID:21937600 PMID:24491816 NCBI chr18:70,404,431...70,446,330 JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO MGI:6358090 (PMID:28934388) RGD PMID:28934388 NCBI chr18:23,215,954...23,244,917 JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:84,441,954...84,473,093 JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2137515|MGI:2152544|MGI:2179048|MGI:5587034 (PMID:29615573) RGD PMID:29615573 NCBI chr 3:71,269,425...71,343,936 JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO MGI:1918244 (PMID:30420556) RGD PMID:30420556 NCBI chr 7:114,619,509...114,648,850 JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) RGD PMID:17954912 NCBI chr 2:176,902,141...176,916,015 JBrowse link
G Whrn whirlin involved_in IEA
ISO
GO_REF:0000107
(PMID:24011083)
Ensembl
RGD
PMID:24011083 GO_REF:0000107 NCBI chr 5:76,828,308...76,911,945 JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in ISO (PMID:2202907) RGD PMID:2202907 NCBI chr 7:131,817,558...131,821,605 JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 involved_in ISO (PMID:17609112) RGD PMID:17609112 NCBI chr 5:144,549,350...144,621,259 JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO
GO_REF:0000024
(PMID:18423449)
UniProt
RGD
PMID:18423449 GO_REF:0000024 NCBI chr 6:44,008,333...44,010,354 JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108078|MGI:1860298 (PMID:18257070)
Ensembl
RGD
PMID:18257070 GO_REF:0000107 NCBI chr16:75,278,325...75,316,736 JBrowse link
dentin mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (PMID:23174213) RGD PMID:23174213 NCBI chr 1:210,556,270...210,568,021 JBrowse link
dentinogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:29396644 RGD:408427365 NCBI chr 8:109,841,729...109,843,543 JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within
involved_in
IEP
ISO
IBA
MGI:2653208 (PMID:25027178)
GO_REF:0000033
RGD
GO_Central
PMID:25027178 PMID:24502800 GO_REF:0000033, RGD:12911210 NCBI chr14:5,870,232...5,876,339 JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase acts_upstream_of_or_within ISO MGI:5432377 (PMID:22732358) RGD PMID:22732358 NCBI chr12:20,940,654...20,999,072 JBrowse link
G Fpr2 formyl peptide receptor 2 IEP RGD PMID:29396644 RGD:408427365 NCBI chr 1:58,776,592...58,785,227 JBrowse link
G Htra1 HtrA serine peptidase 1 IEP RGD PMID:22595117 RGD:7394756 NCBI chr 1:185,497,815...185,547,380 JBrowse link
G Serpine1 serpin family E member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:27046084)
Ensembl
RGD
PMID:27046084 GO_REF:0000107 NCBI chr12:25,237,977...25,248,356 JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP RGD PMID:12369784 RGD:7243151 NCBI chr17:9,224,010...9,238,983 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856877 (PMID:16025116)
Ensembl
RGD
PMID:16025116 GO_REF:0000107 NCBI chr19:34,162,337...34,245,786 JBrowse link
ectoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:99783 (PMID:10498685) RGD PMID:10498685 NCBI chr 3:135,470,123...135,474,326 JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1347476 (PMID:10498685)
UniProt
RGD
PMID:10498685 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617 JBrowse link
ectodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO MGI:95456 (PMID:25446535) RGD PMID:25446535 NCBI chr 3:89,808,837...89,836,977 JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor acts_upstream_of_or_within ISO MGI:1335079 (PMID:25446535) RGD PMID:25446535 NCBI chr11:48,491,057...48,507,843 JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) RGD PMID:10742100 NCBI chr20:3,227,836...3,232,598 JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:58,548,899...58,568,861 JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17070479) RGD PMID:17070479 NCBI chr 6:50,674,910...50,676,904 JBrowse link
embryonic epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ret ret proto-oncogene acts_upstream_of_or_within ISO MGI:1930016 (PMID:15569713) RGD PMID:15569713 NCBI chr 4:152,998,344...153,040,556 JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:97902 (PMID:15569713)
Ensembl
RGD
PMID:15569713 GO_REF:0000107 NCBI chr 7:120,568,707...120,630,796 JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16546160)
GO_REF:0000107
RGD
Ensembl
PMID:16546160 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565 JBrowse link
embryonic heart tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO (PMID:11076684) RGD PMID:11076684 NCBI chr10:42,006,646...42,009,213 JBrowse link
enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin, X-linked involved_in ISO
IBA
(PMID:1916828)
(PMID:26403673)
GO_REF:0000033
(PMID:21653221)
RGD
GO_Central
PMID:1916828 PMID:21653221 PMID:26403673 GO_REF:0000033 NCBI chr  X:25,076,362...25,087,660 JBrowse link
G Cftr CF transmembrane conductance regulator IMP RGD PMID:31942562 RGD:126928119 NCBI chr 4:47,422,084...47,694,646 JBrowse link
G Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24339795)
Ensembl
RGD
PMID:24339795 GO_REF:0000107 NCBI chr 9:38,711,726...38,750,942 JBrowse link
G Fam20a FAM20A, golgi associated secretory pathway pseudokinase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:21549343), (PMID:21990045), (PMID:23468644)
MGI:5432376 (PMID:22732358)
GO_REF:0000033
RGD
GO_Central
PMID:21549343 PMID:21990045 PMID:22732358 PMID:23468644 GO_REF:0000033 NCBI chr10:95,136,799...95,197,176 JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5432377 (PMID:22732358)
GO_Central
RGD
PMID:22732358 GO_REF:0000033 NCBI chr12:20,940,654...20,999,072 JBrowse link
G Foxo1 forkhead box O1 IEP RGD PMID:25183529 RGD:10044263 NCBI chr 2:138,462,974...138,541,420 JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO MGI:1926484 (PMID:23264742) RGD PMID:23264742 NCBI chr 3:45,046,295...45,170,532 JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926381 (PMID:10742104)
Ensembl
RGD
PMID:10742104 GO_REF:0000107 NCBI chr17:11,097,214...11,102,879 JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3814719 (PMID:18703497) RGD PMID:18703497 NCBI chr 8:44,101,776...44,164,863 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO MGI:1857774 (PMID:19320717) RGD PMID:19320717 NCBI chr 7:118,712,261...118,780,723 JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) RGD PMID:38172607 NCBI chr10:10,567,834...10,572,453 JBrowse link
G Stim1 stromal interaction molecule 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:24621671)
UniProt
RGD
PMID:24621671 GO_REF:0000024 NCBI chr 1:156,656,246...156,818,777 JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179136 (PMID:19233155)
UniProt
RGD
PMID:19233155 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058 JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (PMID:23174213) RGD PMID:23174213 NCBI chr 1:210,556,270...210,568,021 JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO MGI:4363147|MGI:5913851 (PMID:25008349), (PMID:26247047) RGD PMID:25008349 PMID:26247047 NCBI chr 8:83,718,897...83,902,128 JBrowse link
endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO (PMID:16140292) RGD PMID:16140292 NCBI chr 3:63,387,378...63,506,980 JBrowse link
G Aplnr apelin receptor involved_in ISO (PMID:23603510) RGD PMID:23603510 NCBI chr 3:70,217,407...70,221,052 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16730346)
Ensembl
RGD
PMID:16730346 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416 JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO UniProtKB:P23359 (PMID:10079236) RGD PMID:10079236 NCBI chr 8:76,517,164...76,639,925 JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO UniProtKB:P49003 (PMID:10079236) RGD PMID:10079236 NCBI chr 3:182,059,318...182,135,273 JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:16314491) RGD PMID:16314491 NCBI chr16:9,740,751...9,786,861 JBrowse link
G Nog noggin involved_in IEA
ISO
GO_REF:0000107
(PMID:17218603)
Ensembl
RGD
PMID:17218603 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO UniProtKB:Q7TPD3 (PMID:25691540) RGD PMID:25691540 NCBI chr11:24,067,869...25,108,694 JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO UniProtKB:O89026 (PMID:25691540) RGD PMID:25691540 NCBI chr11:26,015,919...27,583,750 JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (PMID:22130515) RGD PMID:22130515 NCBI chr10:71,177,082...71,186,275 JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO (PMID:15843409), (PMID:21983003) RGD PMID:15843409 PMID:21983003 NCBI chr 8:23,200,104...23,258,218 JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO (PMID:22130515) RGD PMID:22130515 NCBI chr12:42,540,378...42,555,490 JBrowse link
endocardial cushion to mesenchymal transition involved in heart valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 involved_in ISO (PMID:20960543) RGD PMID:20960543 NCBI chr 2:174,681,676...174,689,061 JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:1341884 (PMID:15680351) RGD PMID:15680351 NCBI chr 2:93,096,605...93,100,316 JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:1341800 (PMID:15680351) RGD PMID:15680351 NCBI chr 1:26,822,131...26,832,218 JBrowse link
endocardium formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3777011 (PMID:17573777) RGD PMID:17573777 NCBI chr 3:131,677,391...131,707,123 JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:19091769) RGD PMID:19091769 NCBI chr13:104,196,615...104,251,007 JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:103559 (PMID:17610846) RGD PMID:17610846 NCBI chr 5:15,016,660...15,022,228 JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within ISO MGI:107543 (PMID:17610846) RGD PMID:17610846 NCBI chr 3:168,785,488...168,787,290 JBrowse link
endoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:1858007|MGI:2148567|MGI:4418897 (PMID:12194849), (PMID:23824574) RGD PMID:12194849 PMID:23824574 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 1:237,794,969...237,798,650 JBrowse link
G Dusp1 dual specificity phosphatase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:17,184,853...17,187,646 JBrowse link
G Dusp4 dual specificity phosphatase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:64,079,893...64,101,396 JBrowse link
G Dusp5 dual specificity phosphatase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:262,543,774...262,557,201 JBrowse link
G ENSRNOG00000069024 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Eomes eomesodermin acts_upstream_of_or_within
involved_in
ISO MGI:3774028 (PMID:21245162), (PMID:21822279)
(PMID:18171685)
RGD PMID:18171685 PMID:21245162 PMID:21822279 NCBI chr 8:127,059,215...127,067,070 JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2179511 (PMID:8582296) RGD PMID:8582296 NCBI chr15:41,635,572...41,707,252 JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857848 (PMID:15355796)
UniProt
RGD
PMID:15355796 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617 JBrowse link
G Mixl1 Mix paired-like homeobox 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2387829 (PMID:17151016)
GO_Central
RGD
PMID:17151016 GO_REF:0000033 NCBI chr13:92,422,031...92,426,065 JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18462699)
Ensembl
RGD
PMID:18462699 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501 JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO (PMID:21822279) RGD PMID:21822279 NCBI chr18:72,124,792...72,193,345 JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO
IBA
(PMID:18682240)
GO_REF:0000033
RGD
GO_Central
PMID:18682240 GO_REF:0000033 NCBI chr 5:15,016,660...15,022,228 JBrowse link
G Sox7 SRY-box transcription factor 7 involved_in ISO (PMID:18682240) RGD PMID:18682240 NCBI chr15:38,180,503...38,187,264 JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C acts_upstream_of_or_within ISO MGI:4124681 (PMID:22187428) RGD PMID:22187428 NCBI chr10:102,908,958...102,979,543 JBrowse link
endodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd3 bromodomain containing 3 involved_in ISO (PMID:32895492) RGD PMID:32895492 NCBI chr 3:10,773,163...10,829,675 JBrowse link
G Col11a1 collagen type XI alpha 1 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 2:201,820,715...202,013,853 JBrowse link
G Col12a1 collagen type XII alpha 1 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 8:80,547,592...80,665,665 JBrowse link
G Col4a2 collagen type IV alpha 2 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr16:78,047,591...78,183,360 JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr20:11,905,690...11,924,111 JBrowse link
G Col7a1 collagen type VII alpha 1 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 8:109,604,877...109,637,249 JBrowse link
G Col8a1 collagen type VIII alpha 1 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr11:42,776,851...42,906,432 JBrowse link
G Fn1 fibronectin 1 involved_in ISO
IEA
(PMID:23154389)
GO_REF:0000107
RGD
Ensembl
PMID:23154389 GO_REF:0000107 NCBI chr 9:80,645,507...80,714,200 JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within ISO MGI:2177785 (PMID:9832509) RGD PMID:9832509 NCBI chr18:2,460,909...2,492,322 JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16908534)
Ensembl
RGD
PMID:16908534 GO_REF:0000107 NCBI chr10:101,380,354...101,448,138 JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS
(PMID:17624332)
GO_REF:0000024
RGD
UniProt
PMID:17624332 GO_REF:0000024 NCBI chr 7:57,762,710...57,884,555 JBrowse link
G Hsbp1 heat shock factor binding protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24380799)
Ensembl
RGD
PMID:24380799 GO_REF:0000107 NCBI chr19:64,309,703...64,314,035 JBrowse link
G Inhba inhibin subunit beta A involved_in ISO (PMID:21828274) RGD PMID:21828274 NCBI chr17:53,787,159...53,810,942 JBrowse link
G Itga4 integrin subunit alpha 4 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 3:84,569,487...84,646,276 JBrowse link
G Itga5 integrin subunit alpha 5 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 7:136,358,097...136,381,305 JBrowse link
G Itga7 integrin subunit alpha 7 involved_in ISO
IEA
(PMID:23154389)
GO_REF:0000107
RGD
Ensembl
PMID:23154389 GO_REF:0000107 NCBI chr 7:1,360,125...1,388,886 JBrowse link
G Itgav integrin subunit alpha V involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 3:89,245,382...89,333,512 JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr20:11,061,009...11,097,242 JBrowse link
G Itgb5 integrin subunit beta 5 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr11:66,828,428...66,944,231 JBrowse link
G Lama3 laminin subunit alpha 3 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr18:3,523,168...3,751,722 JBrowse link
G Lamb1 laminin subunit beta 1 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 6:47,835,492...47,902,585 JBrowse link
G Lamb3 laminin subunit beta 3 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr13:104,833,810...104,875,405 JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:16908534)
Ensembl
RGD
PMID:16908534 GO_REF:0000107 NCBI chr 8:73,578,747...73,650,184 JBrowse link
G Mixl1 Mix paired-like homeobox 1 involved_in ISO (PMID:19038793) RGD PMID:19038793 NCBI chr13:92,422,031...92,426,065 JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr15:27,887,795...27,897,020 JBrowse link
G Mmp15 matrix metallopeptidase 15 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr19:9,663,449...9,684,943 JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in ISO
IEA
(PMID:23154389)
GO_REF:0000107
RGD
Ensembl
PMID:23154389 GO_REF:0000107 NCBI chr19:30,327,643...30,355,856 JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:23154389)
Ensembl
RGD
PMID:23154389 GO_REF:0000107 NCBI chr 8:4,724,009...4,733,864 JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in IEA
ISO
GO_REF:0000107
(PMID:23154389)
Ensembl
RGD
PMID:23154389 GO_REF:0000107 NCBI chr 3:174,103,474...174,111,434 JBrowse link
G Myh9 myosin, heavy chain 9 involved_in IEA
ISO
GO_REF:0000107
MGI:3522434 (PMID:15292239)
Ensembl
RGD
PMID:15292239 GO_REF:0000107 NCBI chr 7:111,224,291...111,304,963 JBrowse link
G Nodal nodal growth differentiation factor involved_in ISO (PMID:21741376) RGD PMID:21741376 NCBI chr20:29,368,436...29,376,837 JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16466956)
Ensembl
RGD
PMID:16466956 GO_REF:0000107 NCBI chr  X:50,756,886...50,761,014 JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:25242323) RGD PMID:25242323 NCBI chr 8:119,390,207...119,475,863 JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of ISO (PMID:17940068) RGD PMID:17940068 NCBI chr 5:15,016,660...15,022,228 JBrowse link
G Vtn vitronectin involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr10:63,394,732...63,397,812 JBrowse link
endodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc73 cell division cycle 73 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:19345177)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19345177 GO_REF:0000024 GO_REF:0000107 NCBI chr13:55,357,226...55,449,690 JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1858007|MGI:2148567 (PMID:12194849)
Ensembl
RGD
PMID:12194849 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:19345177) RGD PMID:19345177 NCBI chr 1:174,571,952...174,601,974 JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in ISS
ISO
GO_REF:0000024
(PMID:19345177)
UniProt
RGD
PMID:19345177 GO_REF:0000024 NCBI chr 8:76,199,547...76,223,983 JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISS
ISO
GO_REF:0000024
(PMID:19345177)
UniProt
RGD
PMID:19345177 GO_REF:0000024 NCBI chr 1:83,683,654...83,689,233 JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) RGD PMID:10742100 NCBI chr20:3,227,836...3,232,598 JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) involved_in ISO (PMID:19345177) RGD PMID:19345177 NCBI chr 3:106,659,363...106,718,956 JBrowse link
endodermal cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:20308546)
Ensembl
RGD
PMID:20308546 GO_REF:0000107 NCBI chr18:2,460,909...2,492,322 JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO (PMID:20308546) RGD PMID:20308546 NCBI chr 5:15,016,660...15,022,228 JBrowse link
endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3774028 (PMID:21245162)
GO_Central
RGD
PMID:21245162 GO_REF:0000033 NCBI chr 8:127,059,215...127,067,070 JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857856 (PMID:18635606)
Ensembl
RGD
PMID:18635606 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888 JBrowse link
G Nanog Nanog homeobox acts_upstream_of_or_within ISO (PMID:20713518) RGD PMID:20713518 NCBI chr 4:155,943,737...155,951,116 JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:207135