ONTOLOGY REPORT - ANNOTATIONS |
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Term: | blood vessel endothelial cell migration |
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Accession: | GO:0043534
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browse the term
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Definition: | The orderly movement of an endothelial cell into the extracellular matrix in order to form new blood vessels during angiogenesis. |
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Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G |
Amot |
angiomotin |
acts_upstream_of_or_within |
ISO IEA |
MGI:2656627 (PMID:17699752) GO_REF:0000107 |
RGD Ensembl |
PMID:17699752 |
GO_REF:0000107 |
NCBI chr X:108,982,399...109,041,265
Ensembl chr X:108,984,022...109,041,272
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Amotl1 |
angiomotin-like 1 |
acts_upstream_of |
ISO |
(PMID:19590046) |
RGD |
PMID:19590046 |
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NCBI chr 8:11,348,651...11,467,564
Ensembl chr 8:11,353,674...11,467,573
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G |
Apoa1 |
apolipoprotein A1 |
acts_upstream_of_or_within |
ISO |
MGI:1857127 (PMID:16339487) |
RGD |
PMID:16339487 |
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NCBI chr 8:55,423,945...55,425,729
Ensembl chr 8:46,527,144...46,529,035
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Cdh5 |
cadherin 5 |
involved_in |
ISO IEA |
(PMID:31934175) GO_REF:0000107 |
RGD Ensembl |
PMID:31934175 |
GO_REF:0000107 |
NCBI chr19:815,415...854,478
Ensembl chr19:815,411...854,368
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Cln3 |
CLN3 lysosomal/endosomal transmembrane protein, battenin |
acts_upstream_of_or_within |
ISO IEA |
MGI:3759415 (PMID:24792215) GO_REF:0000107 |
RGD Ensembl |
PMID:24792215 |
GO_REF:0000107 |
NCBI chr 1:190,586,649...190,600,034
Ensembl chr 1:181,156,073...181,167,434
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Col18a1 |
collagen type XVIII alpha 1 chain |
acts_upstream_of |
ISO |
(PMID:15188432) |
RGD |
PMID:15188432 |
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NCBI chr20:11,473,645...11,582,111
Ensembl chr20:11,474,104...11,582,593
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Cxcl12 |
C-X-C motif chemokine ligand 12 |
acts_upstream_of_or_within |
ISO |
MGI:1934384 (PMID:15626744) |
RGD |
PMID:15626744 |
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NCBI chr 4:152,060,781...152,073,628
Ensembl chr 4:150,388,325...150,401,168
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Cxcr4 |
C-X-C motif chemokine receptor 4 |
acts_upstream_of_or_within |
ISO |
MGI:1934442 (PMID:15626744) |
RGD |
PMID:15626744 |
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NCBI chr13:42,630,383...42,634,288
Ensembl chr13:40,077,976...40,081,883
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Cyp1b1 |
cytochrome P450, family 1, subfamily b, polypeptide 1 |
acts_upstream_of_or_within |
ISO IEA |
MGI:2154690 (PMID:19005183) GO_REF:0000107 |
RGD Ensembl |
PMID:19005183 |
GO_REF:0000107 |
NCBI chr 6:21,093,927...21,103,091
Ensembl chr 6:15,342,344...15,350,917
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Emp2 |
epithelial membrane protein 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:23439602) |
UniProt RGD |
PMID:23439602 |
GO_REF:0000024 |
NCBI chr10:5,866,869...5,901,533
Ensembl chr10:5,360,073...5,394,733
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G |
Gpx1 |
glutathione peroxidase 1 |
acts_upstream_of_or_within |
ISO IEA |
MGI:2158814 (PMID:16373599) GO_REF:0000107 |
RGD Ensembl |
PMID:16373599 |
GO_REF:0000107 |
NCBI chr 8:117,905,462...117,906,588
Ensembl chr 8:109,026,905...109,028,024
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Myh9 |
myosin, heavy chain 9 |
involved_in |
ISO ISS |
(PMID:16403913) GO_REF:0000024 |
RGD UniProt |
PMID:16403913 |
GO_REF:0000024 |
NCBI chr 7:111,224,291...111,304,963
Ensembl chr 7:109,343,706...109,424,457
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G |
Nrp1 |
neuropilin 1 |
acts_upstream_of_or_within |
ISO IEA |
MGI:1857853 (PMID:15376331) GO_REF:0000107 |
RGD Ensembl |
PMID:15376331 |
GO_REF:0000107 |
NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
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Prl7d1 |
prolactin family 7, subfamily D, member 1 |
acts_upstream_of |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr17:36,982,746...37,053,328
Ensembl chr17:37,046,834...37,053,691
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Ptk2b |
protein tyrosine kinase 2 beta |
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IMP |
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RGD |
PMID:11739395 |
RGD:70597 |
NCBI chr15:44,536,275...44,656,754
Ensembl chr15:40,360,723...40,481,282
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Robo4 |
roundabout guidance receptor 4 |
acts_upstream_of |
ISO IEA |
(PMID:12941633) GO_REF:0000107 |
RGD Ensembl |
PMID:12941633 |
GO_REF:0000107 |
NCBI chr 8:37,119,953...37,133,887
Ensembl chr 8:37,119,988...37,132,519
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Scarb1 |
scavenger receptor class B, member 1 |
acts_upstream_of_or_within |
ISO IEA |
MGI:1888384 (PMID:16339487) GO_REF:0000107 |
RGD Ensembl |
PMID:16339487 |
GO_REF:0000107 |
NCBI chr12:36,957,302...37,023,982
Ensembl chr12:31,296,156...31,362,647
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Sox18 |
SRY-box transcription factor 18 |
involved_in |
ISO IEA |
(PMID:16882943) GO_REF:0000107 |
RGD Ensembl |
PMID:16882943 |
GO_REF:0000107 |
NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
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Vhl |
von Hippel-Lindau tumor suppressor |
acts_upstream_of_or_within |
ISO IEA |
MGI:2136645|MGI:2450311 (PMID:16537898) GO_REF:0000107 |
RGD Ensembl |
PMID:16537898 |
GO_REF:0000107 |
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
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Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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Lemd3 |
LEM domain containing 3 |
acts_upstream_of_or_within |
ISO |
MGI:3703328 (PMID:16943282) |
RGD |
PMID:16943282 |
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NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
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Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G |
Adtrp |
androgen-dependent TFPI-regulating protein |
involved_in |
ISO IEA |
(PMID:28341552) GO_REF:0000107 |
RGD Ensembl |
PMID:28341552 |
GO_REF:0000107 |
NCBI chr17:23,113,578...23,199,616
Ensembl chr17:22,930,740...22,993,826
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Akt1 |
AKT serine/threonine kinase 1 |
involved_in |
ISO IEA |
(PMID:28341552) GO_REF:0000107 |
RGD Ensembl |
PMID:28341552 |
GO_REF:0000107 |
NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921
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G |
Cdh5 |
cadherin 5 |
involved_in |
ISO IEA |
(PMID:33972531) GO_REF:0000107 |
RGD Ensembl |
PMID:33972531 |
GO_REF:0000107 |
NCBI chr19:815,415...854,478
Ensembl chr19:815,411...854,368
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G |
Clec14a |
C-type lectin domain containing 14A |
involved_in |
ISO IEA |
MGI:5292853 (PMID:25745997) GO_REF:0000107 |
RGD Ensembl |
PMID:25745997 |
GO_REF:0000107 |
NCBI chr 6:75,881,470...75,884,612
Ensembl chr 6:75,881,473...75,884,612
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Cripto |
cripto, EGF-CFC family member |
involved_in |
ISO |
(PMID:17720976) |
RGD |
PMID:17720976 |
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NCBI chr 8:119,803,182...119,808,714
Ensembl chr 8:110,925,024...110,930,308
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G |
Ctnnd1 |
catenin delta 1 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:33972531) |
RGD |
PMID:33972531 |
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NCBI chr 3:90,090,025...90,141,247
Ensembl chr 3:69,683,313...69,734,516
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G |
Efnb2 |
ephrin B2 |
involved_in |
ISO IEA |
(PMID:12734395) GO_REF:0000107 |
RGD Ensembl |
PMID:12734395 |
GO_REF:0000107 |
NCBI chr16:87,485,215...87,529,224
Ensembl chr16:80,783,417...80,824,391
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G |
Egr3 |
early growth response 3 |
involved_in |
ISO IEA |
(PMID:18059339) GO_REF:0000107 |
RGD Ensembl |
PMID:18059339 |
GO_REF:0000107 |
NCBI chr15:45,150,335...45,156,052
Ensembl chr15:45,150,567...45,154,627
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Ehd4 |
EH-domain containing 4 |
involved_in acts_upstream_of_or_within |
ISO IEA |
(PMID:33972531) GO_REF:0000107 |
RGD Ensembl |
PMID:33972531 |
GO_REF:0000107 |
NCBI chr 3:107,058,191...107,121,985
Ensembl chr 3:107,058,958...107,122,002
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G |
Ephb4 |
EPH receptor B4 |
involved_in |
ISO IEA |
(PMID:12734395) GO_REF:0000107 |
RGD Ensembl |
PMID:12734395 |
GO_REF:0000107 |
NCBI chr12:24,963,174...24,988,473
Ensembl chr12:19,326,427...19,351,314
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G |
Fgf2 |
fibroblast growth factor 2 |
involved_in |
ISO IEA |
UniProtKB:Q9UQL6 (PMID:18059339), (PMID:19351956) GO_REF:0000107 |
RGD Ensembl |
PMID:18059339 PMID:19351956 |
GO_REF:0000107 |
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
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Gpld1 |
glycosylphosphatidylinositol specific phospholipase D1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:17720976) |
UniProt Ensembl RGD |
PMID:17720976 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr17:40,512,659...40,560,483
Ensembl chr17:40,084,617...40,126,939
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Grem1 |
gremlin 1, DAN family BMP antagonist |
involved_in |
ISO |
(PMID:17077323), (PMID:20660291) |
RGD |
PMID:17077323 PMID:20660291 |
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NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082
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G |
Itgb1 |
integrin subunit beta 1 |
acts_upstream_of_or_within |
ISO |
(PMID:16424942) |
RGD |
PMID:16424942 |
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NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195
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G |
Kdr |
kinase insert domain receptor |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:20660291) |
Ensembl RGD |
PMID:20660291 |
GO_REF:0000107 |
NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,217,871...32,261,018
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G |
Mia3 |
MIA SH3 domain ER export factor 3 |
involved_in |
ISO |
(PMID:28341552) |
RGD |
PMID:28341552 |
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NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
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G |
Micall1 |
MICAL-like 1 |
involved_in acts_upstream_of_or_within |
ISO IEA |
(PMID:33972531) GO_REF:0000107 |
RGD Ensembl |
PMID:33972531 |
GO_REF:0000107 |
NCBI chr 7:110,676,706...110,707,171
Ensembl chr 7:110,676,775...110,707,177
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G |
Mmrn2 |
multimerin 2 |
involved_in |
ISO |
(PMID:25745997) |
RGD |
PMID:25745997 |
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NCBI chr16:9,712,181...9,733,653
Ensembl chr16:9,705,892...9,727,405
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G |
Nr4a1 |
nuclear receptor subfamily 4, group A, member 1 |
involved_in |
ISO IEA |
(PMID:18059339) GO_REF:0000107 |
RGD Ensembl |
PMID:18059339 |
GO_REF:0000107 |
NCBI chr 7:134,247,153...134,268,044
Ensembl chr 7:132,374,840...132,389,297
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G |
Nrp1 |
neuropilin 1 |
involved_in |
ISO IEA |
(PMID:23315162) GO_REF:0000107 |
RGD Ensembl |
PMID:23315162 |
GO_REF:0000107 |
NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
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Pacsin2 |
protein kinase C and casein kinase substrate in neurons 2 |
involved_in acts_upstream_of_or_within |
ISO IEA |
(PMID:33972531) GO_REF:0000107 |
RGD Ensembl |
PMID:33972531 |
GO_REF:0000107 |
NCBI chr 7:114,505,525...114,599,087
Ensembl chr 7:114,505,152...114,598,546
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Pik3r3 |
phosphoinositide-3-kinase regulatory subunit 3 |
involved_in |
ISO |
UniProtKB:P31749|UniProtKB:Q96IZ2 (PMID:28341552) |
RGD |
PMID:28341552 |
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NCBI chr 5:134,936,790...135,009,303
Ensembl chr 5:129,701,229...129,772,583
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Robo1 |
roundabout guidance receptor 1 |
involved_in |
ISO IEA |
UniProtKB:Q9UQL6 (PMID:19351956) GO_REF:0000107 |
RGD Ensembl |
PMID:19351956 |
GO_REF:0000107 |
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
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G |
Slit2 |
slit guidance ligand 2 |
involved_in |
ISO IEA |
(PMID:19351956) GO_REF:0000107 |
RGD Ensembl |
PMID:19351956 |
GO_REF:0000107 |
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Srf |
serum response factor |
involved_in acts_upstream_of_or_within |
ISO IEA |
(PMID:15180964) GO_REF:0000107 (PMID:18804439) |
RGD Ensembl |
PMID:15180964 PMID:18804439 |
GO_REF:0000107 |
NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733
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G |
Vegfa |
vascular endothelial growth factor A |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:20660291) |
Ensembl RGD |
PMID:20660291 |
GO_REF:0000107 |
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
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Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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Acvrl1 |
activin A receptor like type 1 |
involved_in |
ISO |
(PMID:19592636) |
RGD |
PMID:19592636 |
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NCBI chr 7:134,117,917...134,135,306
Ensembl chr 7:132,239,729...132,256,591
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G |
Angpt2 |
angiopoietin 2 |
involved_in |
ISO IEA |
(PMID:9660821) GO_REF:0000107 |
RGD Ensembl |
PMID:9660821 |
GO_REF:0000107 |
NCBI chr16:77,790,760...77,841,241
Ensembl chr16:71,088,364...71,138,804
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Angpt4 |
angiopoietin 4 |
involved_in |
ISO IEA |
(PMID:16790085) GO_REF:0000107 |
RGD Ensembl |
PMID:16790085 |
GO_REF:0000107 |
NCBI chr 3:140,420,389...140,454,213
Ensembl chr 3:140,420,389...140,453,583
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G |
Apoe |
apolipoprotein E |
involved_in |
ISO IEA |
(PMID:9685360) GO_REF:0000107 |
RGD Ensembl |
PMID:9685360 |
GO_REF:0000107 |
NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932
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Atp2b4 |
ATPase plasma membrane Ca2+ transporting 4 |
involved_in |
ISO IEA |
(PMID:25147342) GO_REF:0000107 |
RGD Ensembl |
PMID:25147342 |
GO_REF:0000107 |
NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246
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G |
Csnk2b |
casein kinase 2 beta |
involved_in |
ISO |
(PMID:19592636) |
RGD |
PMID:19592636 |
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NCBI chr20:3,704,833...3,709,999
Ensembl chr20:3,698,733...3,707,133
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G |
Dll4 |
delta like canonical Notch ligand 4 |
acts_upstream_of_or_within |
ISO IEA |
(PMID:18559979) GO_REF:0000107 |
RGD Ensembl |
PMID:18559979 |
GO_REF:0000107 |
NCBI chr 3:126,770,945...126,780,769
Ensembl chr 3:106,316,986...106,326,931
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G |
Fgf2 |
fibroblast growth factor 2 |
involved_in |
ISO IEA |
(PMID:18555217) GO_REF:0000107 |
RGD Ensembl |
PMID:18555217 |
GO_REF:0000107 |
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
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Gadd45a |
growth arrest and DNA-damage-inducible, alpha |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:23329839) |
Ensembl RGD |
PMID:23329839 |
GO_REF:0000107 |
NCBI chr 4:97,484,497...97,486,799
Ensembl chr 4:96,154,789...96,157,115
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G |
Hmgb1 |
high mobility group box 1 |
involved_in |
ISO |
(PMID:23148224) |
RGD |
PMID:23148224 |
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NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Hrg |
histidine-rich glycoprotein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22348394) |
UniProt RGD |
PMID:22348394 |
GO_REF:0000024 |
NCBI chr11:91,559,087...91,573,982
Ensembl chr11:78,054,498...78,069,389
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G |
Hrgl1 |
histidine-rich glycoprotein like 1 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr11:91,543,964...91,553,946
Ensembl chr11:78,039,376...78,049,353
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Jup |
junction plakoglobin |
involved_in |
ISO IEA |
RNAcentral:URS00005A31EB_9606 (PMID:28115160) GO_REF:0000107 |
RGD Ensembl |
PMID:28115160 |
GO_REF:0000107 |
NCBI chr10:85,800,812...85,827,881
Ensembl chr10:85,300,440...85,327,057
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G |
Mecp2 |
methyl CpG binding protein 2 |
involved_in |
ISO IEA |
(PMID:23960241) GO_REF:0000107 |
RGD Ensembl |
PMID:23960241 |
GO_REF:0000107 |
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
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Mef2c |
myocyte enhancer factor 2C |
involved_in |
ISO |
RNAcentral:URS000001C659_9606|RNAcentral:URS000075BB59_9606 (PMID:26184978) |
RGD |
PMID:26184978 |
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NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
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Mir101-2 |
microRNA 101-2 |
acts_upstream_of |
ISO |
(PMID:31934175) |
RGD |
PMID:31934175 |
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NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467
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G |
Mir101a |
microRNA 101a |
acts_upstream_of |
ISO |
(PMID:31934175) |
RGD |
PMID:31934175 |
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NCBI chr 5:115,966,332...115,966,406
Ensembl chr 5:115,966,328...115,966,410
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G |
Mir129-1 |
microRNA 129-1 |
involved_in |
ISO |
(PMID:26790441) |
RGD |
PMID:26790441 |
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NCBI chr 4:58,589,711...58,589,782
Ensembl chr 4:57,624,295...57,624,366
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G |
Mir129-2 |
microRNA 129-2 |
involved_in |
ISO |
(PMID:26790441) |
RGD |
PMID:26790441 |
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NCBI chr 3:100,657,390...100,657,486
Ensembl chr 3:80,202,044...80,202,140
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G |
Mir132 |
microRNA 132 |
involved_in |
ISO |
(PMID:24924687) |
RGD |
PMID:24924687 |
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NCBI chr10:60,522,033...60,522,133
Ensembl chr10:60,023,696...60,023,796
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G |
Mir133b |
microRNA 133b |
involved_in |
ISO |
(PMID:26790441) |
RGD |
PMID:26790441 |
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NCBI chr 9:30,594,582...30,594,665
Ensembl chr 9:23,098,134...23,098,217
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G |
Mir137 |
microRNA 137 |
involved_in |
ISO |
(PMID:24927112) |
RGD |
PMID:24927112 |
|
NCBI chr 2:209,165,709...209,165,810
Ensembl chr 2:206,480,884...206,480,985
|
|
G |
Mir152 |
microRNA 152 |
involved_in |
ISO |
(PMID:24813629) |
RGD |
PMID:24813629 |
|
NCBI chr10:82,329,383...82,329,467
Ensembl chr10:81,832,936...81,833,020
|
|
G |
Mir15b |
microRNA 15b |
involved_in acts_upstream_of |
ISO |
(PMID:28254819) (PMID:23688497) |
RGD |
PMID:23688497 PMID:28254819 |
|
NCBI chr 2:155,555,178...155,555,275
Ensembl chr 2:153,245,200...153,245,297
|
|
G |
Mir200b |
microRNA 200b |
acts_upstream_of involved_in |
ISO |
(PMID:22499991) (PMID:21081489) |
RGD |
PMID:21081489 PMID:22499991 |
|
NCBI chr 5:171,931,495...171,931,589
Ensembl chr 5:166,649,272...166,649,366
|
|
G |
Mir204 |
microRNA 204 |
involved_in |
ISO |
(PMID:28901393) |
RGD |
PMID:28901393 |
|
NCBI chr 1:229,743,461...229,743,570
Ensembl chr 1:220,316,931...220,317,040
|
|
G |
Mir212 |
microRNA 212 |
involved_in |
ISO |
(PMID:25217442) |
RGD |
PMID:25217442 |
|
NCBI chr10:60,023,403...60,023,513
Ensembl chr10:60,023,403...60,023,513
|
|
G |
Mir24-2 |
microRNA 24-2 |
acts_upstream_of |
ISO |
(PMID:21788589) |
RGD |
PMID:21788589 |
|
NCBI chr19:40,859,455...40,859,562
Ensembl chr19:23,954,683...23,954,790
|
|
G |
Mir322 |
microRNA 322 |
involved_in |
ISO |
RNAcentral:URS00000F6E49_9606 (PMID:23263626) |
RGD |
PMID:23263626 |
|
NCBI chr X:137,726,147...137,726,241
Ensembl chr X:132,806,594...132,806,688
|
|
G |
Mir503 |
microRNA 503 |
involved_in |
ISO |
RNAcentral:URS00000F0F49_9606 (PMID:23263626) |
RGD |
PMID:23263626 |
|
NCBI chr X:137,725,856...137,725,926
Ensembl chr X:132,806,303...132,806,373
|
|
G |
Mir92a1 |
microRNA 92a-1 |
involved_in |
ISO |
(PMID:19460962) |
RGD |
PMID:19460962 |
|
NCBI chr15:98,588,555...98,588,632
Ensembl chr15:92,181,336...92,181,413
|
|
G |
Mir92a2 |
microRNA 92a-2 |
involved_in |
ISO |
(PMID:19460962) |
RGD |
PMID:19460962 |
|
NCBI chr X:137,342,928...137,343,019
Ensembl chr X:132,421,942...132,422,033
|
|
G |
Mirlet7b |
microRNA let-7b |
acts_upstream_of |
ISO |
(PMID:24978044) |
RGD |
PMID:24978044 |
|
NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
|
|
G |
Pparg |
peroxisome proliferator-activated receptor gamma |
involved_in |
ISO |
(PMID:28566713) |
RGD |
PMID:28566713 |
|
NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468
|
|
G |
Prl7d1 |
prolactin family 7, subfamily D, member 1 |
acts_upstream_of_or_within |
IEA |
GO_REF:0000107 |
Ensembl |
|
GO_REF:0000107 |
NCBI chr17:36,982,746...37,053,328
Ensembl chr17:37,046,834...37,053,691
|
|
G |
Rgcc |
regulator of cell cycle |
involved_in |
ISO |
(PMID:19652095) |
RGD |
PMID:19652095 |
|
NCBI chr15:61,071,574...61,084,408
Ensembl chr15:54,662,483...54,681,141
|
|
G |
Robo4 |
roundabout guidance receptor 4 |
acts_upstream_of_or_within |
ISO IEA |
(PMID:12941633) GO_REF:0000107 |
RGD Ensembl |
PMID:12941633 |
GO_REF:0000107 |
NCBI chr 8:37,119,953...37,133,887
Ensembl chr 8:37,119,988...37,132,519
|
|
G |
Tgfb1 |
transforming growth factor, beta 1 |
involved_in |
ISO IEA ISS |
(PMID:18555217) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:18555217 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
|
|
G |
Thbs1 |
thrombospondin 1 |
involved_in |
ISO IEA |
(PMID:18555217) GO_REF:0000107 |
RGD Ensembl |
PMID:18555217 |
GO_REF:0000107 |
NCBI chr 3:125,510,250...125,525,402
Ensembl chr 3:105,056,292...105,071,440
|
|
G |
Tnf |
tumor necrosis factor |
involved_in |
ISO IEA |
(PMID:22499991) GO_REF:0000107 |
RGD Ensembl |
PMID:22499991 |
GO_REF:0000107 |
NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
|
|
G |
Vash1 |
vasohibin 1 |
involved_in |
ISO IEA |
(PMID:15467828) GO_REF:0000107 |
RGD Ensembl |
PMID:15467828 |
GO_REF:0000107 |
NCBI chr 6:112,060,086...112,076,689
Ensembl chr 6:106,329,123...106,345,726
|
|
|
|
Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G |
Card10 |
caspase recruitment domain family, member 10 |
involved_in |
ISO IEA |
(PMID:24863965) GO_REF:0000107 |
RGD Ensembl |
PMID:24863965 |
GO_REF:0000107 |
NCBI chr 7:110,330,460...110,371,551
Ensembl chr 7:110,330,408...110,359,224
|
|
G |
Dll4 |
delta like canonical Notch ligand 4 |
involved_in |
ISO IEA |
(PMID:20616313), (PMID:23388056) GO_REF:0000107 |
RGD Ensembl |
PMID:20616313 PMID:23388056 |
GO_REF:0000107 |
NCBI chr 3:126,770,945...126,780,769
Ensembl chr 3:106,316,986...106,326,931
|
|
G |
Hdac5 |
histone deacetylase 5 |
involved_in |
ISO IEA |
(PMID:19351956) GO_REF:0000107 |
RGD Ensembl |
PMID:19351956 |
GO_REF:0000107 |
NCBI chr10:87,653,139...87,688,078
Ensembl chr10:87,152,978...87,188,235
|
|
G |
Itgb1bp1 |
integrin subunit beta 1 binding protein 1 |
involved_in |
ISO |
(PMID:20616313) |
RGD |
PMID:20616313 |
|
NCBI chr 6:46,549,994...46,564,735
Ensembl chr 6:40,821,339...40,836,037
|
|
G |
Klf4 |
KLF transcription factor 4 |
involved_in |
ISO IEA |
(PMID:20551324) GO_REF:0000107 |
RGD Ensembl |
PMID:20551324 |
GO_REF:0000107 |
NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
|
|
G |
Map2k5 |
mitogen activated protein kinase kinase 5 |
involved_in |
IMP |
PMID:20551324 |
BHF-UCL |
PMID:20551324 |
RGD:8553940 |
NCBI chr 8:63,625,220...63,852,090
Ensembl chr 8:63,625,221...63,851,983
|
|
G |
Meox2 |
mesenchyme homeobox 2 |
involved_in |
ISO IEA |
RNAcentral:URS0000170CF4_9606 (PMID:20516212) GO_REF:0000107 |
RGD Ensembl |
PMID:20516212 |
GO_REF:0000107 |
NCBI chr 6:59,584,025...59,644,722
Ensembl chr 6:53,856,758...53,917,467
|
|
G |
Mir146a |
microRNA 146a |
involved_in |
ISO |
(PMID:28727754) |
RGD |
PMID:28727754 |
|
NCBI chr10:28,349,996...28,350,090
Ensembl chr10:27,848,516...27,848,610
|
|
G |
Mir16-2 |
microRNA 16-2 |
involved_in acts_upstream_of |
ISO |
(PMID:27748453) (PMID:23083510) |
RGD |
PMID:23083510 PMID:27748453 |
|
NCBI chr 2:155,555,327...155,555,421
Ensembl chr 2:153,245,349...153,245,443
|
|
G |
Mir193a |
microRNA 193a |
involved_in |
ISO |
(PMID:28276476) |
RGD |
PMID:28276476 |
|
NCBI chr10:65,170,306...65,170,417
Ensembl chr10:64,672,343...64,672,454
|
|
G |
Mir196a1 |
microRNA 196a-1 |
involved_in |
ISO |
(PMID:22773844) |
RGD |
PMID:22773844 |
|
NCBI chr10:81,727,551...81,727,630
Ensembl chr10:81,231,006...81,231,085
|
|
G |
Mir196a2 |
microRNA 196a-2 |
involved_in |
ISO |
(PMID:22773844) |
RGD |
PMID:22773844 |
|
NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509
|
|
G |
Mir199a2 |
microRNA 199a-2 |
acts_upstream_of |
ISO |
(PMID:28358369) |
RGD |
PMID:28358369 |
|
NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063
|
|
G |
Mir19b1 |
microRNA 19b-1 |
involved_in |
ISO |
(PMID:22197821) |
RGD |
PMID:22197821 |
|
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
|
|
G |
Mir19b2 |
microRNA 19b-2 |
involved_in |
ISO |
(PMID:22197821) |
RGD |
PMID:22197821 |
|
NCBI chr X:132,422,072...132,422,167
Ensembl chr X:132,422,072...132,422,167
|
|
G |
Mir200c |
microRNA 200c |
acts_upstream_of |
ISO |
(PMID:24205206) |
RGD |
PMID:24205206 |
|
NCBI chr 4:157,523,679...157,523,747
|
|
G |
Mir205 |
microRNA 205 |
acts_upstream_of |
ISO |
(PMID:23800974) |
RGD |
PMID:23800974 |
|
NCBI chr13:107,564,535...107,564,642
Ensembl chr13:105,035,878...105,035,985
|
|
G |
Mir206 |
microRNA 206 |
involved_in |
ISO |
(PMID:26175229) |
RGD |
PMID:26175229 |
|
NCBI chr 9:30,590,697...30,590,780
Ensembl chr 9:23,094,249...23,094,332
|
|
G |
Mir20a |
microRNA 20a |
involved_in |
ISO |
(PMID:22696064) |
RGD |
PMID:22696064 |
|
NCBI chr15:98,588,303...98,588,387
Ensembl chr15:92,181,084...92,181,168
|
|
G |
Mir22 |
microRNA 22 |
involved_in |
ISO |
(PMID:25323119) |
RGD |
PMID:25323119 |
|
NCBI chr10:60,805,331...60,805,425
Ensembl chr10:60,307,039...60,307,133
|
|
G |
Mir221 |
microRNA 221 |
involved_in |
ISO |
UniProtKB:P50222 (PMID:20516212) |
RGD |
PMID:20516212 |
|
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
|
|
G |
Mir26a |
microRNA 26a |
involved_in |
ISO |
(PMID:24047927), (PMID:25613580), (PMID:28602162) |
RGD |
PMID:24047927 PMID:25613580 PMID:28602162 |
|
NCBI chr 8:127,633,048...127,633,137
Ensembl chr 8:118,755,289...118,755,378
|
|
G |
Mir322 |
microRNA 322 |
involved_in |
ISO |
RNAcentral:URS00000F6E49_9606 (PMID:28566713) |
RGD |
PMID:28566713 |
|
NCBI chr X:137,726,147...137,726,241
Ensembl chr X:132,806,594...132,806,688
|
|
G |
Mir361 |
microRNA 361 |
involved_in |
ISO |
(PMID:24865854) |
RGD |
PMID:24865854 |
|
NCBI chr X:82,438,463...82,438,532
Ensembl chr X:78,246,206...78,246,275
|
|
G |
Mir410 |
microRNA 410 |
involved_in |
ISO |
(PMID:28122380) |
RGD |
PMID:28122380 |
|
NCBI chr 6:134,579,763...134,579,838
Ensembl chr 6:128,758,354...128,758,434
|
|
G |
Mir494 |
microRNA 494 |
involved_in |
ISO |
(PMID:28124060) |
RGD |
PMID:28124060 |
|
NCBI chr 6:134,550,115...134,550,197
Ensembl chr 6:128,728,709...128,728,793
|
|
G |
Mir497 |
microRNA 497 |
involved_in |
ISO |
(PMID:28122380) |
RGD |
PMID:28122380 |
|
NCBI chr10:55,450,171...55,450,239
Ensembl chr10:54,951,505...54,951,584
|
|
G |
Mir503 |
microRNA 503 |
involved_in |
ISO |
RNAcentral:URS00000F0F49_9606 (PMID:28566713) |
RGD |
PMID:28566713 |
|
NCBI chr X:137,725,856...137,725,926
Ensembl chr X:132,806,303...132,806,373
|
|
G |
Mirlet7a1 |
microRNA let-7a-1 |
acts_upstream_of |
ISO |
(PMID:30467960) |
RGD |
PMID:30467960 |
|
NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867
|
|
G |
Mirlet7c2 |
microRNA let7c-2 |
acts_upstream_of |
ISO |
(PMID:30467960) |
RGD |
PMID:30467960 |
|
NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865
|
|
G |
Mmrn1 |
multimerin 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:89,875,408...89,950,814
Ensembl chr 4:89,903,174...89,950,474
|
|
G |
Mmrn2 |
multimerin 2 |
involved_in |
ISO IBA IEA |
(PMID:22020326) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:22020326 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr16:9,712,181...9,733,653
Ensembl chr16:9,705,892...9,727,405
|
|
G |
Notch1 |
notch receptor 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:20616313) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:20616313 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
|
|
G |
Pdcd10 |
programmed cell death 10 |
involved_in |
ISO IEA |
(PMID:23388056) GO_REF:0000107 |
RGD Ensembl |
PMID:23388056 |
GO_REF:0000107 |
NCBI chr 2:162,602,516...162,644,690
Ensembl chr 2:160,303,449...160,346,018
|
|
G |
Pik3r2 |
phosphoinositide-3-kinase regulatory subunit 2 |
involved_in |
IMP |
PMID:25652288 |
BHF-UCL |
PMID:25652288 |
RGD:11053232 |
NCBI chr16:18,699,389...18,708,045
Ensembl chr16:18,665,457...18,674,065
|
|
G |
Rhoa |
ras homolog family member A |
acts_upstream_of_or_within |
ISO IEA |
UniProtKB:Q9Y3M8 (PMID:20208559) GO_REF:0000107 |
RGD Ensembl |
PMID:20208559 |
GO_REF:0000107 |
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
|
|
G |
Spred1 |
sprouty-related, EVH1 domain containing 1 |
involved_in |
ISO IEA |
(PMID:18694565) GO_REF:0000107 |
RGD Ensembl |
PMID:18694565 |
GO_REF:0000107 |
NCBI chr 3:103,983,120...104,050,321
Ensembl chr 3:103,983,072...104,049,718
|
|
G |
Stard13 |
StAR-related lipid transfer domain containing 13 |
acts_upstream_of_or_within |
ISO IEA |
UniProtKB:P61586 (PMID:20208559) GO_REF:0000107 |
RGD Ensembl |
PMID:20208559 |
GO_REF:0000107 |
NCBI chr12:566,282...959,372
Ensembl chr12:566,310...959,421
|
|
G |
Tbxa2r |
thromboxane A2 receptor |
involved_in |
ISO IEA |
RNAcentral:URS00005416E3_9606 (PMID:24558106) GO_REF:0000107 |
RGD Ensembl |
PMID:24558106 |
GO_REF:0000107 |
NCBI chr 7:8,383,347...8,390,753
Ensembl chr 7:8,383,378...8,388,176
|
|
G |
Thbs1 |
thrombospondin 1 |
involved_in |
ISO IEA |
(PMID:25660232) GO_REF:0000107 |
RGD Ensembl |
PMID:25660232 |
GO_REF:0000107 |
NCBI chr 3:125,510,250...125,525,402
Ensembl chr 3:105,056,292...105,071,440
|
|
|
|
Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G |
Adam17 |
ADAM metallopeptidase domain 17 |
involved_in |
ISO IEA |
(PMID:24813629) GO_REF:0000107 |
RGD Ensembl |
PMID:24813629 |
GO_REF:0000107 |
NCBI chr 6:40,872,936...40,920,700
Ensembl chr 6:40,872,856...40,920,639
|
|
G |
Akt1 |
AKT serine/threonine kinase 1 |
involved_in |
ISO IEA |
(PMID:20011604) GO_REF:0000107 |
RGD Ensembl |
PMID:20011604 |
GO_REF:0000107 |
NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921
|
|
G |
Akt3 |
AKT serine/threonine kinase 3 |
involved_in |
ISO |
(PMID:28254819) |
RGD |
PMID:28254819 |
|
NCBI chr13:91,475,839...91,758,060
Ensembl chr13:88,946,091...89,225,708
|
|
G |
Alox12 |
arachidonate 12-lipoxygenase, 12S type |
|
IMP |
|
RGD |
PMID:10733500 |
RGD:2313864 |
NCBI chr10:55,456,923...55,469,239
Ensembl chr10:54,958,271...54,970,542
|
|
G |
Amot |
angiomotin |
involved_in |
ISO |
(PMID:16043488) |
RGD |
PMID:16043488 |
|
NCBI chr X:108,982,399...109,041,265
Ensembl chr X:108,984,022...109,041,272
|
|
G |
Amotl1 |
angiomotin-like 1 |
acts_upstream_of_or_within |
ISO |
(PMID:19590046) |
RGD |
PMID:19590046 |
|
NCBI chr 8:11,348,651...11,467,564
Ensembl chr 8:11,353,674...11,467,573
|
|
G |
Angpt1 |
angiopoietin 1 |
involved_in |
ISO IEA |
(PMID:9660821) GO_REF:0000107 |
RGD Ensembl |
PMID:9660821 |
GO_REF:0000107 |
NCBI chr 7:75,415,959...75,668,696
Ensembl chr 7:73,531,486...73,784,067
|
|
G |
Angpt4 |
angiopoietin 4 |
involved_in |
ISO IEA |
(PMID:15284220) GO_REF:0000107 |
RGD Ensembl |
PMID:15284220 |
GO_REF:0000107 |
NCBI chr 3:140,420,389...140,454,213
Ensembl chr 3:140,420,389...140,453,583
|
|
G |
Atp5f1a |
ATP synthase F1 subunit alpha |
involved_in |
ISO IEA |
UniProtKB:P62328 (PMID:21106936) GO_REF:0000107 |
RGD Ensembl |
PMID:21106936 |
GO_REF:0000107 |
NCBI chr18:73,567,537...73,575,473
Ensembl chr18:71,292,374...71,300,794
|
|
G |
Atp5f1b |
ATP synthase F1 subunit beta |
involved_in |
ISO IEA |
UniProtKB:P62328 (PMID:21106936) GO_REF:0000107 |
RGD Ensembl |
PMID:21106936 |
GO_REF:0000107 |
NCBI chr 7:1,100,058...1,106,461
Ensembl chr 7:515,460...567,273
|
|
G |
Cd40 |
CD40 molecule |
involved_in |
ISO IEA |
(PMID:28566713) GO_REF:0000107 |
RGD Ensembl |
PMID:28566713 |
GO_REF:0000107 |
NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:153,790,449...153,805,534
|
|
G |
Col18a1 |
collagen type XVIII alpha 1 chain |
acts_upstream_of_or_within |
ISO |
(PMID:15188432) |
RGD |
PMID:15188432 |
|
NCBI chr20:11,473,645...11,582,111
Ensembl chr20:11,474,104...11,582,593
|
|
G |
Ets1 |
ETS proto-oncogene 1, transcription factor |
involved_in |
ISO IEA |
(PMID:21081489) GO_REF:0000107 |
RGD Ensembl |
PMID:21081489 |
GO_REF:0000107 |
NCBI chr 8:39,303,936...39,426,022
Ensembl chr 8:31,045,945...31,168,010
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|
G |
Fgf18 |
fibroblast growth factor 18 |
involved_in |
ISO |
RNAcentral:URS00004A5A07_9606 (PMID:25449503) |
RGD |
PMID:25449503 |
|
NCBI chr10:17,706,011...17,737,702
Ensembl chr10:17,706,174...17,736,818
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|
G |
Fgf2 |
fibroblast growth factor 2 |
involved_in |
ISO IEA ISS |
RNAcentral:URS00000F0F49_9606|RNAcentral:URS00000F6E49_9606|UniProtKB:P11362 (PMID:18555217), (PMID:20011604), (PMID:23263626), (PMID:28302677) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:18555217 PMID:20011604 PMID:23263626 PMID:28302677 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
|
|
G |
Fgfr1 |
Fibroblast growth factor receptor 1 |
involved_in |
ISO |
RNAcentral:URS00000F0F49_9606|RNAcentral:URS00000F6E49_9606|UniProtKB:P09038 (PMID:23263626) |
RGD |
PMID:23263626 |
|
NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350
|
|
G |
Gab1 |
GRB2-associated binding protein 1 |
involved_in |
ISO |
(PMID:17178724) |
RGD |
PMID:17178724 |
|
NCBI chr19:44,035,693...44,143,617
Ensembl chr19:27,131,262...27,239,236
|
|
G |
Gata2 |
GATA binding protein 2 |
involved_in |
ISO IEA |
(PMID:22499991) GO_REF:0000107 |
RGD Ensembl |
PMID:22499991 |
GO_REF:0000107 |
NCBI chr 4:122,211,501...122,225,058
Ensembl chr 4:120,658,986...120,667,761
|
|
G |
Hif1a |
hypoxia inducible factor 1 subunit alpha |
involved_in |
ISO IEA |
(PMID:26879375) GO_REF:0000107 |
RGD Ensembl |
PMID:26879375 |
GO_REF:0000107 |
NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261
|
|
G |
Hmgb1 |
high mobility group box 1 |
involved_in |
ISO |
(PMID:28276476) |
RGD |
PMID:28276476 |
|
NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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|
G |
Hspb1 |
heat shock protein family B (small) member 1 |
involved_in |
ISO IEA |
(PMID:18440775) GO_REF:0000107 |
RGD Ensembl |
PMID:18440775 |
GO_REF:0000107 |
NCBI chr12:26,430,640...26,432,301
Ensembl chr12:20,794,028...20,795,743
|
|
G |
Igf1 |
insulin-like growth factor 1 |
involved_in |
IGI |
PMID:28315330 |
BHF-UCL |
PMID:28315330 |
RGD:13506274 |
NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296
|
|
G |
Igf2 |
insulin-like growth factor 2 |
involved_in |
IGI |
PMID:28735866 |
BHF-UCL |
PMID:28735866 |
RGD:13506264 |
NCBI chr 1:207,243,873...207,261,263
Ensembl chr 1:197,814,410...197,823,018
|
|
G |
Kdr |
kinase insert domain receptor |
involved_in |
ISO IEA |
(PMID:22499991), (PMID:23688497), (PMID:26879375) GO_REF:0000107 |
RGD Ensembl |
PMID:22499991 PMID:23688497 PMID:26879375 |
GO_REF:0000107 |
NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,217,871...32,261,018
|
|
G |
Map2k3 |
mitogen activated protein kinase kinase 3 |
involved_in |
ISO IEA |
(PMID:22696064) GO_REF:0000107 |
RGD Ensembl |
PMID:22696064 |
GO_REF:0000107 |
NCBI chr10:46,107,639...46,128,986
Ensembl chr10:45,607,163...45,629,492
|
|
G |
Mapk14 |
mitogen activated protein kinase 14 |
NOT|involved_in |
ISO |
(PMID:18440775) |
RGD |
PMID:18440775 |
|
NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,749,670...6,810,589
|
|
G |
Mir126a |
microRNA 126a |
involved_in |
ISO |
(PMID:18694566) |
RGD |
PMID:18694566 |
|
NCBI chr 3:29,813,150...29,813,267
Ensembl chr 3:9,415,063...9,415,180
|
|
G |
Mir135b |
microRNA 135b |
involved_in |
ISO |
(PMID:26184978) |
RGD |
PMID:26184978 |
|
NCBI chr13:43,638,857...43,638,953
Ensembl chr13:43,638,857...43,638,953
|
|
G |
Mir143 |
microRNA 143 |
involved_in |
ISO |
(PMID:26311719) |
RGD |
PMID:26311719 |
|
NCBI chr18:57,371,349...57,371,453
Ensembl chr18:55,101,006...55,101,110
|
|
G |
Mir200a |
microRNA 200a |
involved_in |
ISO |
(PMID:21698760) |
RGD |
PMID:21698760 |
|
NCBI chr 5:171,930,717...171,930,805
|
|
G |
Mir210 |
microRNA 210 |
involved_in |
ISO |
(PMID:18417479) |
RGD |
PMID:18417479 |
|
NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454
|
|
G |
Mir221 |
microRNA 221 |
involved_in |
ISO |
(PMID:19351599) |
RGD |
PMID:19351599 |
|
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
|
|
G |
Mir30a |
microRNA 30a |
involved_in |
ISO |
(PMID:23960241) |
RGD |
PMID:23960241 |
|
NCBI chr 9:25,737,600...25,737,670
Ensembl chr 9:25,737,600...25,737,670
|
|
G |
Mir31 |
microRNA 31 |
involved_in |
ISO |
(PMID:26933040) |
RGD |
PMID:26933040 |
|
NCBI chr 5:103,599,038...103,599,143
|
|
G |
Mir342 |
microRNA 342 |
involved_in |
ISO |
(PMID:26857067) |
RGD |
PMID:26857067 |
|
NCBI chr 6:133,329,655...133,329,753
Ensembl chr 6:127,565,269...127,565,367
|
|
G |
Mir499a |
microRNA 499a |
involved_in |
ISO |
(PMID:26184978) |
RGD |
PMID:26184978 |
|
NCBI chr 3:144,110,469...144,110,533
Ensembl chr 3:144,110,469...144,110,533
|
|
G |
Nfe2l2 |
NFE2 like bZIP transcription factor 2 |
|
IMP |
|
RGD |
PMID:23904790 |
RGD:10412703 |
NCBI chr 3:81,001,529...81,031,165
Ensembl chr 3:60,594,242...60,621,737
|
|
G |
Nos3 |
nitric oxide synthase 3 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:23802567) |
Ensembl RGD |
PMID:23802567 |
GO_REF:0000107 |
NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166
|
|
G |
Nus1 |
NUS1 dehydrodolichyl diphosphate synthase subunit |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
|
GO_REF:0000107 |
NCBI chr20:31,811,817...31,838,562
Ensembl chr20:31,811,817...31,838,561
|
|
G |
P2rx4 |
purinergic receptor P2X 4 |
involved_in |
ISO |
(PMID:21106936) |
RGD |
PMID:21106936 |
|
NCBI chr12:39,505,438...39,523,349
Ensembl chr12:33,844,396...33,862,253
|
|
G |
Pdgfb |
platelet derived growth factor subunit B |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:9685360) |
UniProt Ensembl RGD |
PMID:9685360 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984
|
|
G |
Pdpk1 |
3-phosphoinositide dependent protein kinase-1 |
involved_in |
ISO IEA |
(PMID:23802567) GO_REF:0000107 |
RGD Ensembl |
PMID:23802567 |
GO_REF:0000107 |
NCBI chr10:13,610,000...13,687,226
Ensembl chr10:13,105,498...13,174,623
|
|
G |
Plcg1 |
phospholipase C, gamma 1 |
involved_in |
ISO IEA |
(PMID:20011604) GO_REF:0000107 |
RGD Ensembl |
PMID:20011604 |
GO_REF:0000107 |
NCBI chr 3:169,805,299...169,836,040
Ensembl chr 3:149,385,587...149,416,330
|
|
G |
Plg |
plasminogen |
involved_in |
ISO |
UniProtKB:P62328 (PMID:21106936) |
RGD |
PMID:21106936 |
|
NCBI chr 1:50,872,927...50,915,406
Ensembl chr 1:48,325,185...48,367,786
|
|
G |
Prkca |
protein kinase C, alpha |
involved_in |
ISO IEA |
(PMID:20011604) GO_REF:0000107 |
RGD Ensembl |
PMID:20011604 |
GO_REF:0000107 |
NCBI chr10:93,388,991...93,787,617
Ensembl chr10:92,894,012...93,288,012
|
|
G |
Prkd1 |
protein kinase D1 |
involved_in |
ISO IEA |
UniProtKB:Q9BZL6 (PMID:18440775), (PMID:20497126) GO_REF:0000107 |
RGD Ensembl |
PMID:18440775 PMID:20497126 |
GO_REF:0000107 |
NCBI chr 6:73,460,640...73,774,433
Ensembl chr 6:67,725,905...68,039,042
|
|
G |
Prkd2 |
protein kinase D2 |
involved_in |
ISO IEA |
UniProtKB:Q15139 (PMID:18440775), (PMID:20497126) GO_REF:0000107 |
RGD Ensembl |
PMID:18440775 PMID:20497126 |
GO_REF:0000107 |
NCBI chr 1:86,640,095...86,670,476
Ensembl chr 1:77,513,986...77,542,376
|
|
G |
Sirt1 |
sirtuin 1 |
involved_in |
ISO IEA |
(PMID:23960241) GO_REF:0000107 |
RGD Ensembl |
PMID:23960241 |
GO_REF:0000107 |
NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
|
|
G |
Sp1 |
Sp1 transcription factor |
involved_in |
ISO IEA |
(PMID:23802567) GO_REF:0000107 |
RGD Ensembl |
PMID:23802567 |
GO_REF:0000107 |
NCBI chr 7:135,419,864...135,450,513
Ensembl chr 7:133,541,491...133,571,961
|
|
G |
Stat5a |
signal transducer and activator of transcription 5A |
involved_in |
ISO IEA |
(PMID:20489169) GO_REF:0000107 |
RGD Ensembl |
PMID:20489169 |
GO_REF:0000107 |
NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866
|
|
G |
Tgfb1 |
transforming growth factor, beta 1 |
involved_in |
ISO IEA ISS |
(PMID:18555217) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:18555217 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
|
|
G |
Thbs1 |
thrombospondin 1 |
involved_in |
ISO IEA |
(PMID:18555217) GO_REF:0000107 |
RGD Ensembl |
PMID:18555217 |
GO_REF:0000107 |
NCBI chr 3:125,510,250...125,525,402
Ensembl chr 3:105,056,292...105,071,440
|
|
G |
Tmsb4x |
thymosin beta 4, X-linked |
involved_in |
ISO |
UniProtKB:P00747-PRO_0000028057|UniProtKB:P06576|UniProtKB:P25705 (PMID:21106936) |
RGD |
PMID:21106936 |
|
NCBI chr X:30,761,611...30,763,612
Ensembl chr X:27,128,610...27,146,667 Ensembl chr10:27,128,610...27,146,667
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|
G |
Vegfa |
vascular endothelial growth factor A |
involved_in |
ISO IEA |
(PMID:18440775), (PMID:20497126), (PMID:23688497), (PMID:9202027) GO_REF:0000107 |
RGD Ensembl |
PMID:9202027 PMID:18440775 PMID:20497126 PMID:23688497 |
GO_REF:0000107 |
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
|
|
G |
Vegfc |
vascular endothelial growth factor C |
|
IMP |
|
RGD |
PMID:12706123 |
RGD:1580593 |
NCBI chr16:44,445,293...44,560,887
Ensembl chr16:37,712,262...37,827,848
|
|
|
|
Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G |
Abl1 |
ABL proto-oncogene 1, non-receptor tyrosine kinase |
involved_in |
ISO IEA |
(PMID:24863063) GO_REF:0000107 |
RGD Ensembl |
PMID:24863063 |
GO_REF:0000107 |
NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065
|
|
G |
Akt3 |
AKT serine/threonine kinase 3 |
involved_in |
ISO |
(PMID:25323119) |
RGD |
PMID:25323119 |
|
NCBI chr13:91,475,839...91,758,060
Ensembl chr13:88,946,091...89,225,708
|
|
G |
Anxa1 |
annexin A1 |
involved_in |
ISO IEA |
(PMID:22773844) GO_REF:0000107 |
RGD Ensembl |
PMID:22773844 |
GO_REF:0000107 |
NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343
|
|
G |
Cib1 |
calcium and integrin binding 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:17975111) |
UniProt RGD |
PMID:17975111 |
GO_REF:0000024 |
NCBI chr 1:143,587,591...143,593,153
Ensembl chr 1:134,178,331...134,213,423
|
|
G |
Fgf2 |
fibroblast growth factor 2 |
involved_in |
ISO ISS IEA |
(PMID:28302677) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:28302677 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
|
|
G |
Fgfbp1 |
fibroblast growth factor binding protein 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:27121396) |
Ensembl RGD |
PMID:27121396 |
GO_REF:0000107 |
NCBI chr14:67,103,686...67,107,492
Ensembl chr14:67,104,545...67,107,496
|
|
G |
Foxc2 |
forkhead box C2 |
involved_in |
ISO |
(PMID:18579532) |
RGD |
PMID:18579532 |
|
NCBI chr19:66,094,718...66,097,420
Ensembl chr19:49,185,662...49,188,737
|
|
G |
Gata2 |
GATA binding protein 2 |
involved_in |
ISO IEA |
(PMID:27780851) GO_REF:0000107 |
RGD Ensembl |
PMID:27780851 |
GO_REF:0000107 |
NCBI chr 4:122,211,501...122,225,058
Ensembl chr 4:120,658,986...120,667,761
|
|
G |
Hdac7 |
histone deacetylase 7 |
involved_in |
ISO IEA |
(PMID:19351956) GO_REF:0000107 |
RGD Ensembl |
PMID:19351956 |
GO_REF:0000107 |
NCBI chr 7:128,923,918...128,961,926
Ensembl chr 7:128,923,920...128,962,072
|
|
G |
Hdac9 |
histone deacetylase 9 |
involved_in |
ISO |
(PMID:19351956) |
RGD |
PMID:19351956 |
|
NCBI chr 6:56,489,472...57,351,654
Ensembl chr 6:50,763,590...51,625,333
|
|
G |
Hmox1 |
heme oxygenase 1 |
involved_in |
ISO IEA |
RNAcentral:URS00001230A0_9606 (PMID:24844779) GO_REF:0000107 |
RGD Ensembl |
PMID:24844779 |
GO_REF:0000107 |
NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,467,244...13,474,079
|
|
G |
Jcad |
junctional cadherin 5 associated |
involved_in |
ISO |
(PMID:28705794) |
RGD |
PMID:28705794 |
|
NCBI chr17:53,089,382...53,130,996
Ensembl chr17:53,089,382...53,130,967
|
|
G |
Kdr |
kinase insert domain receptor |
involved_in |
ISO IEA |
(PMID:18977327), (PMID:24205206) GO_REF:0000107 |
RGD Ensembl |
PMID:18977327 PMID:24205206 |
GO_REF:0000107 |
NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,217,871...32,261,018
|
|
G |
Mir101-2 |
microRNA 101-2 |
involved_in |
ISO |
(PMID:24844779) |
RGD |
PMID:24844779 |
|
NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467
|
|
G |
Mir101a |
microRNA 101a |
involved_in |
ISO |
(PMID:24844779) |
RGD |
PMID:24844779 |
|
NCBI chr 5:115,966,332...115,966,406
Ensembl chr 5:115,966,328...115,966,410
|
|
G |
Mir10a |
microRNA 10a |
involved_in |
ISO |
RNAcentral:URS000058760A_9606 (PMID:22955733) |
RGD |
PMID:22955733 |
|
NCBI chr10:81,283,171...81,283,280
Ensembl chr10:81,283,171...81,283,280
|
|
G |
Mir10b |
microRNA 10b |
involved_in |
ISO |
RNAcentral:URS000016D2D4_9606 (PMID:22955733) |
RGD |
PMID:22955733 |
|
NCBI chr 3:59,628,438...59,628,546
Ensembl chr 3:59,628,438...59,628,546
|
|
G |
Mir126a |
microRNA 126a |
involved_in |
ISO |
(PMID:28065883), (PMID:28124060) |
RGD |
PMID:28065883 PMID:28124060 |
|
NCBI chr 3:29,813,150...29,813,267
Ensembl chr 3:9,415,063...9,415,180
|
|
G |
Mir132 |
microRNA 132 |
involved_in |
ISO |
(PMID:28065883) |
RGD |
PMID:28065883 |
|
NCBI chr10:60,522,033...60,522,133
Ensembl chr10:60,023,696...60,023,796
|
|
G |
Mir146a |
microRNA 146a |
involved_in |
ISO |
(PMID:24863965), (PMID:27121396) |
RGD |
PMID:24863965 PMID:27121396 |
|
NCBI chr10:28,349,996...28,350,090
Ensembl chr10:27,848,516...27,848,610
|
|
G |
Mir23a |
microRNA 23a |
involved_in |
ISO |
RNAcentral:URS0000183BED_9606 (PMID:21536891) |
RGD |
PMID:21536891 |
|
NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
|
|
G |
Mir27a |
microRNA 27a |
involved_in |
ISO |
RNAcentral:URS000059311D_9606 (PMID:21536891) |
RGD |
PMID:21536891 |
|
NCBI chr19:40,859,603...40,859,689
Ensembl chr19:23,954,831...23,954,917
|
|
G |
Mir27b |
microRNA 27b |
involved_in |
ISO |
RNAcentral:URS00003B95DA_9606 (PMID:21536891), (PMID:22184411) |
RGD |
PMID:21536891 PMID:22184411 |
|
NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
|
|
G |
Mir296 |
microRNA 296 |
involved_in |
ISO |
(PMID:18977327) |
RGD |
PMID:18977327 |
|
NCBI chr 3:183,470,069...183,470,146
Ensembl chr 3:163,051,838...163,051,915
|
|
G |
Mir31 |
microRNA 31 |
involved_in |
ISO |
(PMID:24558106) |
RGD |
PMID:24558106 |
|
NCBI chr 5:103,599,038...103,599,143
|
|
G |
Mir487b |
microRNA 487b |
involved_in |
ISO |
(PMID:25660232) |
RGD |
PMID:25660232 |
|
NCBI chr 6:134,562,890...134,562,971
Ensembl chr 6:128,741,485...128,741,566
|
|
G |
Mirlet7f-1 |
microRNA let7f-1 |
involved_in |
ISO |
(PMID:28345812) |
RGD |
PMID:28345812 |
|
NCBI chr17:16,114,130...16,114,226
Ensembl chr17:16,114,130...16,114,226
|
|
G |
Mirlet7f2 |
microRNA let-7f-2 |
involved_in |
ISO |
(PMID:28345812) |
RGD |
PMID:28345812 |
|
NCBI chr X:20,980,632...20,980,714
Ensembl chr X:20,980,632...20,980,714
|
|
G |
Nrp1 |
neuropilin 1 |
involved_in |
ISO IEA |
(PMID:26051942) GO_REF:0000107 |
RGD Ensembl |
PMID:26051942 |
GO_REF:0000107 |
NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633
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G |
Nus1 |
NUS1 dehydrodolichyl diphosphate synthase subunit |
acts_upstream_of |
ISO |
(PMID:28602162) |
RGD |
PMID:28602162 |
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NCBI chr20:31,811,817...31,838,562
Ensembl chr20:31,811,817...31,838,561
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G |
Pik3c2a |
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha |
involved_in |
ISO |
(PMID:26175229) |
RGD |
PMID:26175229 |
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NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
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G |
Plk2 |
polo-like kinase 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:27908889) |
Ensembl RGD |
PMID:27908889 |
GO_REF:0000107 |
NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
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G |
Ptgs2 |
prostaglandin-endoperoxide synthase 2 |
involved_in |
IMP |
PMID:9630216 |
RGD BHF-UCL |
PMID:9630216 PMID:9630216 |
RGD:5135054, RGD:5135054 |
NCBI chr13:64,714,063...64,722,320
Ensembl chr13:62,163,932...62,172,188
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Rhoj |
ras homolog family member J |
involved_in |
ISO IEA |
(PMID:28727754) GO_REF:0000107 |
RGD Ensembl |
PMID:28727754 |
GO_REF:0000107 |
NCBI chr 6:94,035,307...94,117,642
Ensembl chr 6:94,035,483...94,118,275
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G |
Srpx2 |
sushi-repeat-containing protein, X-linked 2 |
involved_in |
ISS IEA ISO IBA |
GO_REF:0000024 GO_REF:0000107 (PMID:19667118) GO_REF:0000033 |
UniProt Ensembl RGD GO_Central |
PMID:19667118 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr X:97,106,455...97,132,197
Ensembl chr X:97,106,561...97,132,195
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Tgfbr3 |
transforming growth factor beta receptor 3 |
involved_in |
ISO IEA |
(PMID:30467960) GO_REF:0000107 |
RGD Ensembl |
PMID:30467960 |
GO_REF:0000107 |
NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341
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G |
Vegfa |
vascular endothelial growth factor A |
involved_in |
IEA ISO |
GO_REF:0000107 RNAcentral:URS00001230A0_9606 (PMID:18059339), (PMID:20551324), (PMID:23083510), (PMID:24844779), (PMID:24865854) |
Ensembl RGD |
PMID:18059339 PMID:20551324 PMID:23083510 PMID:24844779 PMID:24865854 |
GO_REF:0000107 |
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
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Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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Efna1 |
ephrin A1 |
involved_in |
ISO |
(PMID:16782872) |
RGD |
PMID:16782872 |
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NCBI chr 2:176,979,434...176,988,675
Ensembl chr 2:174,681,682...174,690,866
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G |
Epha2 |
Eph receptor A2 |
involved_in |
ISO IEA |
(PMID:16782872) GO_REF:0000107 |
RGD Ensembl |
PMID:16782872 |
GO_REF:0000107 |
NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
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G |
Nf1 |
neurofibromin 1 |
involved_in |
ISO |
(PMID:17404841) |
RGD |
PMID:17404841 |
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NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
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Prcp |
prolylcarboxypeptidase |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
GO_REF:0000033 GO_REF:0000107 MGI:4123933 (PMID:23744584) |
GO_Central Ensembl RGD |
PMID:23744584 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:156,343,894...156,396,295
Ensembl chr 1:146,930,561...146,984,530
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G |
Sh3bp1 |
SH3-domain binding protein 1 |
involved_in |
ISO |
(PMID:24841563) |
RGD |
PMID:24841563 |
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NCBI chr 7:112,338,087...112,350,659
Ensembl chr 7:110,457,710...110,470,201
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Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G |
Fbxw7 |
F-box and WD repeat domain containing 7 |
involved_in |
ISO |
(PMID:23507969) |
RGD |
PMID:23507969 |
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NCBI chr 2:172,447,738...172,609,591
Ensembl chr 2:170,149,694...170,309,941
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Nr2e1 |
nuclear receptor subfamily 2, group E, member 1 |
acts_upstream_of_or_within |
ISO IEA |
MGI:2176560 (PMID:16424942) GO_REF:0000107 |
RGD Ensembl |
PMID:16424942 |
GO_REF:0000107 |
NCBI chr20:47,632,347...47,653,464
Ensembl chr20:46,050,414...46,073,949
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Term paths to the root
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