 Gene-Chemical Interaction Annotations | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Analyze GeneStrainQTL List |
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Gene Ontology AnnotationsDisease AnnotationsGene-Chemical Interaction Annotations
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Gene Ontology AnnotationsBiological Process
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Cellular Component
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Molecular Function
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References - curated| 1. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
| 2. | GOA data from the GO Consortium |
| 3. | Houdart F, etal., Mol Vis. 2005 Dec 9;11:1061-70. |
| 4. | Kessels MM and Qualmann B, EMBO J 2002 Nov 15;21(22):6083-94. |
| 5. | Kim SH, etal., Genes Cells. 2006 Oct;11(10):1197-211. |
| 6. | MGD data from the GO Consortium |
| 7. | NCBI rat LocusLink and RefSeq merged data July 26, 2002 |
| 8. | Qualmann B and Kelly RB, J Cell Biol 2000 Mar 6;148(5):1047-62. |
| 9. | RGD automated import pipeline for gene-chemical interactions |
| 10. | Schwintzer L, etal., EMBO J. 2011 Jul 1;30(15):3147-59. doi: 10.1038/emboj.2011.207. |
| 11. | Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11. |
| 12. | Tentative Sequence Data IDs. TIGR Gene Index, Rat Data |
| 13. | Xu Y, etal., Mol Membr Biol. 2004 Jul-Aug;21(4):269-77. |
References - uncurated| PubMed | 10431838 11082044 15930129 16189514 19056867 20188097 21423176 21610094 23376485 23596323 23793062 23918399 24013648 25416956 25468996 28235806 31515488 |
Genomics
Comparative Map Data| Pacsin2 (Rattus norvegicus - Norway rat) |
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| PACSIN2 (Homo sapiens - human) |
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| Pacsin2 (Mus musculus - house mouse) |
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| Pacsin2 (Chinchilla lanigera - long-tailed chinchilla) |
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| PACSIN2 (Pan paniscus - bonobo/pygmy chimpanzee) |
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| PACSIN2 (Canis lupus familiaris - dog) |
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| Pacsin2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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| PACSIN2 (Sus scrofa - pig) |
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| PACSIN2 (Chlorocebus sabaeus - African green monkey) |
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| Pacsin2 (Heterocephalus glaber - naked mole-rat) |
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Position Markers| D7Rat128 |
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| RH127347 |
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| RH141067 |
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QTLs in Region (Rnor_6.0)| The following QTLs overlap with this region. |  | Full Report | | CSV | | TAB | | Printer | | Gviewer |
miRNA Target Status
Predicted Target Of
| The detailed report is available here: | | Full Report | | CSV | | TAB | | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
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Expression
RNA-SEQ ExpressionHigh: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM
| alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
| High | |||||||||||||
| Medium | 3 | 43 | 56 | 40 | 19 | 40 | 2 | 5 | 74 | 35 | 41 | 11 | 2 |
| Low | 1 | 1 | 1 | 6 | 6 | 6 | |||||||
| Below cutoff |
View RNA-SEQ Expression Data
Sequence
Nucleotide Sequences| RefSeq Transcripts | NM_130740 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| XM_006242050 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_006242051 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_006242052 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_006242053 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_006242055 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_006242058 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_006242060 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_008765660 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_008765661 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_008765662 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017594626 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017594627 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017594628 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017594629 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017594630 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | AABR07058549 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| AAHX01051916 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AAHX01051917 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AAHX01051918 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AF139492 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AF139493 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AF139494 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AF139495 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| BC070911 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| CH473950 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| FQ230278 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Reference Sequences
| RefSeq Acc Id: | ENSRNOT00000013398 ⟹ ENSRNOP00000013398 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENSRNOT00000013428 ⟹ ENSRNOP00000013428 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENSRNOT00000067913 ⟹ ENSRNOP00000060074 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENSRNOT00000088125 ⟹ ENSRNOP00000072822 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | NM_130740 ⟹ NP_570096 | ||||||||||||||||||||
| RefSeq Status: | PROVISIONAL | ||||||||||||||||||||
| Type: | CODING | ||||||||||||||||||||
| Position: |
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| Sequence: |
CAGGTACTGAGCAGATCTGCAAAGTTAGGCTGCTGCAGCCAGCGCTTGACAGAGAAACGTGAGThide sequence |
| RefSeq Acc Id: | XM_006242050 ⟹ XP_006242112 | ||||||||||||
| RefSeq Status: | |||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Sequence: |
CACTGAGCTAAATCCCCAACCCCATGGCTGTGCATTCTTGTGCACACACTATACCCAAAACTTThide sequence |
| RefSeq Acc Id: | XM_006242051 ⟹ XP_006242113 | ||||||||||||
| RefSeq Status: | |||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Sequence: |
CTGGGCAGGGCCGGGGTGCGCGACCGGAGCGGAACGGAAAGGGGTCGGAGTCGCATCCCGGCCGhide sequence |
| RefSeq Acc Id: | XM_006242052 ⟹ XP_006242114 | ||||||||||||
| RefSeq Status: | |||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Sequence: |
CACTGAGCTAAATCCCCAACCCCATGGCTGTGCATTCTTGTGCACACACTATACCCAAAACTTThide sequence |
| RefSeq Acc Id: | XM_006242053 ⟹ XP_006242115 | ||||||||||||
| RefSeq Status: | |||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Sequence: |
GGGTCTGGGCAGGGCCGGGGTGCGCGACCGGAGCGGAACGGAAAGGGGTCGGAGTCGCATCCCGhide sequence |
| RefSeq Acc Id: | XM_006242055 ⟹ XP_006242117 | ||||||||||||
| RefSeq Status: | |||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Sequence: |
CTGGGCAGGGCCGGGGTGCGCGACCGGAGCGGAACGGAAAGGGGTCGGAGTCGCATCCCGGCCGhide sequence |
| RefSeq Acc Id: | XM_006242058 ⟹ XP_006242120 | ||||||||||||
| RefSeq Status: | |||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Sequence: |
CTGGGCAGGGCCGGGGTGCGCGACCGGAGCGGAACGGAAAGGGGTCGGAGTCGCATCCCGGCCGhide sequence |
| RefSeq Acc Id: | XM_006242060 ⟹ XP_006242122 | ||||||||||||
| RefSeq Status: | |||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Sequence: |
CTGGGCAGGGCCGGGGTGCGCGACCGGAGCGGAACGGAAAGGGGTCGGAGTCGCATCCCGGCCGhide sequence |
| RefSeq Acc Id: | XM_008765660 ⟹ XP_008763882 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
ATGGTGCCATCCATGTAAGAAAGCAGGCTGAGCAGGGCCTGGAGAGCACGGTGCTGCTAACTGGhide sequence |
| RefSeq Acc Id: | XM_008765661 ⟹ XP_008763883 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
GTACTTTAAGGTAGACCTGTCTGAAAGGAGAATTTCTGCACTTTCGTTTTTTCTTGTTCGCGTGhide sequence |
| RefSeq Acc Id: | XM_008765662 ⟹ XP_008763884 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
GGGTCTGGGCAGGGCCGGGGTGCGCGACCGGAGCGGAACGGAAAGGGGTCGGAGTCGCATCCCGhide sequence |
| RefSeq Acc Id: | XM_017594626 ⟹ XP_017450115 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
ATGGTGCCATCCATGTAAGAAAGCAGGCTGAGCAGGGCCTGGAGAGCACGGTGCTGCTAACTGGhide sequence |
| RefSeq Acc Id: | XM_017594627 ⟹ XP_017450116 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
GGGAGGGAAGTCTCTGTCCTACAGTCCACGTGGCCATCTCTGATGCTGCCTTTCCAGGAGGAAThide sequence |
| RefSeq Acc Id: | XM_017594628 ⟹ XP_017450117 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
ATGGTGCCATCCATGTAAGAAAGCAGGCTGAGCAGGGCCTGGAGAGCACGGTGCTGCTAACTGGhide sequence |
| RefSeq Acc Id: | XM_017594629 ⟹ XP_017450118 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
ATGGTGCCATCCATGTAAGAAAGCAGGCTGAGCAGGGCCTGGAGAGCACGGTGCTGCTAACTGGhide sequence |
| RefSeq Acc Id: | XM_017594630 ⟹ XP_017450119 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
CCACTGAGCTAAATCCCCAACCCCATGGCTGTGCATTCTTGTGCACACACTATACCCAAAACTThide sequence |
Protein Sequences| Protein RefSeqs | NP_570096 | (Get FASTA) | NCBI Sequence Viewer |
| XP_006242112 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_006242113 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_006242114 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_006242115 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_006242117 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_006242120 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_006242122 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_008763882 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_008763883 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_008763884 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017450115 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017450116 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017450117 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017450118 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017450119 | (Get FASTA) | NCBI Sequence Viewer | |
| GenBank Protein | AAF22211 | (Get FASTA) | NCBI Sequence Viewer |
| AAF22212 | (Get FASTA) | NCBI Sequence Viewer | |
| AAF22213 | (Get FASTA) | NCBI Sequence Viewer | |
| AAF22214 | (Get FASTA) | NCBI Sequence Viewer | |
| AAH70911 | (Get FASTA) | NCBI Sequence Viewer | |
| EDM15628 | (Get FASTA) | NCBI Sequence Viewer | |
| EDM15629 | (Get FASTA) | NCBI Sequence Viewer | |
| EDM15630 | (Get FASTA) | NCBI Sequence Viewer | |
| EDM15631 | (Get FASTA) | NCBI Sequence Viewer | |
| Q9QY17 | (Get FASTA) | NCBI Sequence Viewer |
Reference Sequences
| RefSeq Acc Id: | NP_570096 ⟸ NM_130740 |
| - UniProtKB: | Q9QY17 (UniProtKB/Swiss-Prot), Q6IRI3 (UniProtKB/TrEMBL) |
| - Sequence: |
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARhide sequence |
| RefSeq Acc Id: | XP_006242115 ⟸ XM_006242053 |
| - Peptide Label: | isoform X3 |
| - UniProtKB: | Q9QY17 (UniProtKB/Swiss-Prot) |
| - Sequence: |
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARhide sequence |
| RefSeq Acc Id: | XP_006242122 ⟸ XM_006242060 |
| - Peptide Label: | isoform X9 |
| - UniProtKB: | Q9QY17 (UniProtKB/Swiss-Prot) |
| - Sequence: |
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARhide sequence |
| RefSeq Acc Id: | XP_006242117 ⟸ XM_006242055 |
| - Peptide Label: | isoform X4 |
| - UniProtKB: | Q9QY17 (UniProtKB/Swiss-Prot), Q6IRI3 (UniProtKB/TrEMBL) |
| - Sequence: |
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARhide sequence |
| RefSeq Acc Id: | XP_006242120 ⟸ XM_006242058 |
| - Peptide Label: | isoform X7 |
| - UniProtKB: | Q9QY17 (UniProtKB/Swiss-Prot) |
| - Sequence: |
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARhide sequence |
| RefSeq Acc Id: | XP_006242113 ⟸ XM_006242051 |
| - Peptide Label: | isoform X3 |
| - UniProtKB: | Q9QY17 (UniProtKB/Swiss-Prot) |
| - Sequence: |
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARhide sequence |
| RefSeq Acc Id: | XP_006242114 ⟸ XM_006242052 |
| - Peptide Label: | isoform X3 |
| - UniProtKB: | Q9QY17 (UniProtKB/Swiss-Prot) |
| - Sequence: |
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARhide sequence |
| RefSeq Acc Id: | XP_006242112 ⟸ XM_006242050 |
| - Peptide Label: | isoform X3 |
| - UniProtKB: | Q9QY17 (UniProtKB/Swiss-Prot) |
| - Sequence: |
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARhide sequence |
| RefSeq Acc Id: | XP_008763884 ⟸ XM_008765662 |
| - Peptide Label: | isoform X8 |
| - Sequence: |
MNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAVMSEAERVSELHLEVKASLMhide sequence |
| RefSeq Acc Id: | XP_008763883 ⟸ XM_008765661 |
| - Peptide Label: | isoform X8 |
| - Sequence: |
MNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAVMSEAERVSELHLEVKASLMhide sequence |
| RefSeq Acc Id: | XP_008763882 ⟸ XM_008765660 |
| - Peptide Label: | isoform X1 |
| - Sequence: |
MRVTCQVVLAYRSGVPGIKLHWDTVETGVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAhide sequence |
| RefSeq Acc Id: | XP_017450116 ⟸ XM_017594627 |
| - Peptide Label: | isoform X3 |
| - UniProtKB: | Q9QY17 (UniProtKB/Swiss-Prot) |
| - Sequence: |
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARhide sequence |
| RefSeq Acc Id: | XP_017450119 ⟸ XM_017594630 |
| - Peptide Label: | isoform X8 |
| - Sequence: |
MNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAVMSEAERVSELHLEVKASLMhide sequence |
| RefSeq Acc Id: | XP_017450118 ⟸ XM_017594629 |
| - Peptide Label: | isoform X6 |
| - Sequence: |
MRVTCQVVLAYRSGVPGIKLHWDTVETGVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAhide sequence |
| RefSeq Acc Id: | XP_017450115 ⟸ XM_017594626 |
| - Peptide Label: | isoform X2 |
| - Sequence: |
MRVTCQVVLAYRSGVPGIKLHWDTVETGVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAhide sequence |
| RefSeq Acc Id: | XP_017450117 ⟸ XM_017594628 |
| - Peptide Label: | isoform X5 |
| - Sequence: |
MRVTCQVVLAYRSGVPGIKLHWDTVETGVGNYKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAhide sequence |
| RefSeq Acc Id: | ENSRNOP00000060074 ⟸ ENSRNOT00000067913 |
| RefSeq Acc Id: | ENSRNOP00000013428 ⟸ ENSRNOT00000013428 |
| RefSeq Acc Id: | ENSRNOP00000013398 ⟸ ENSRNOT00000013398 |
| RefSeq Acc Id: | ENSRNOP00000072822 ⟸ ENSRNOT00000088125 |
Protein Domains
F-BAR SH3
TranscriptomePromoters| RGD ID: | 13695546 | ||||||||
| Promoter ID: | EPDNEW_R6071 | ||||||||
| Type: | initiation region | ||||||||
| Name: | Pacsin2_2 | ||||||||
| Description: | protein kinase C and casein kinase substrate in neurons 2 | ||||||||
| SO ACC ID: | SO:0000170 | ||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
| Alternative Promoters: | null; see alsoEPDNEW_R6072 | ||||||||
| Experiment Methods: | Single-end sequencing. | ||||||||
| Position: |
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| RGD ID: | 13695558 | ||||||||
| Promoter ID: | EPDNEW_R6072 | ||||||||
| Type: | initiation region | ||||||||
| Name: | Pacsin2_1 | ||||||||
| Description: | protein kinase C and casein kinase substrate in neurons 2 | ||||||||
| SO ACC ID: | SO:0000170 | ||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
| Alternative Promoters: | null; see alsoEPDNEW_R6071 | ||||||||
| Experiment Methods: | Single-end sequencing. | ||||||||
| Position: |
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Strain Variation
Strain Sequence Variants (Rnor 6.0)
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Damaging VariantsAssembly: Rnor_6.0
| Chromosome | Start Pos | End Pos | Reference Nucleotide | Variant Nucleotide | Variant Type | Strain |
| 7 | 124238351 | 124238352 | C | T | snv | ACI/N (MCW), Buf/N (MCW), WN/N (MCW), MR/N (MCW), F344/NRrrc (MCW) |
Additional Information
External Database Links| Database | Acc Id | Source(s) |
| AGR Gene | RGD:69411 | AgrOrtholog |
| Ensembl Genes | ENSRNOG00000009756 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| Ensembl Protein | ENSRNOP00000013398 | ENTREZGENE, UniProtKB/Swiss-Prot |
| ENSRNOP00000013428 | UniProtKB/TrEMBL | |
| ENSRNOP00000060074 | ENTREZGENE, UniProtKB/Swiss-Prot | |
| ENSRNOP00000072822 | ENTREZGENE, UniProtKB/Swiss-Prot | |
| Ensembl Transcript | ENSRNOT00000013398 | ENTREZGENE, UniProtKB/Swiss-Prot |
| ENSRNOT00000013428 | UniProtKB/TrEMBL | |
| ENSRNOT00000067913 | ENTREZGENE, UniProtKB/Swiss-Prot | |
| ENSRNOT00000088125 | ENTREZGENE, UniProtKB/Swiss-Prot | |
| Gene3D-CATH | 1.20.1270.60 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| IMAGE_CLONE | IMAGE:7104542 | IMAGE-MGC_LOAD |
| InterPro | AH/BAR_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| F_BAR | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| FCH_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| PACSIN1/PACSIN2_SH3 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| PACSIN2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| PACSIN2_F-BAR | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| SH3-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| SH3_domain | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| KEGG Report | rno:124461 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| MGC_CLONE | MGC:91517 | IMAGE-MGC_LOAD |
| NCBI Gene | 124461 | ENTREZGENE |
| PANTHER | PTHR23065:SF14 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| Pfam | FCH | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| SH3_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| PhenoGen | Pacsin2 | PhenoGen |
| PRINTS | SH3DOMAIN | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| PROSITE | F_BAR | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| SH3 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| SMART | FCH | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| SH3 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| Superfamily-SCOP | SSF103657 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| SSF50044 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
| TIGR | TC230697 | |
| TC230698 | ||
| UniGene | Rn.17106 | ENTREZGENE |
| UniProt | PACN2_RAT | UniProtKB/Swiss-Prot |
| Q6IRI3 | ENTREZGENE, UniProtKB/TrEMBL | |
| Q9QY17 | ENTREZGENE | |
| R9PXU3_RAT | UniProtKB/TrEMBL | |
| UniProt Secondary | Q9QY18 | UniProtKB/Swiss-Prot |
| Q9QY19 | UniProtKB/Swiss-Prot | |
| Q9QY20 | UniProtKB/Swiss-Prot |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2002-06-10 | Pacsin2 | protein kinase C and casein kinase substrate in neurons 2 | Name updated | 70584 | APPROVED |
RGD Curation Notes| Note Type | Note | Reference |
|---|
 |
| More on Pacsin2 | |
|
Alliance Gene |
|
NCBI Gene |
|
Ensembl Gene |
|
|
JBrowse: rn5 rn6 |
|
NCBI Genome Data Viewer |
| RGD Object Information | |
| RGD ID: | 69411 |
| Created: | 2001-11-27 |
| Species: | Rattus norvegicus |
| Last Modified: | 2020-11-24 |
| Status: | ACTIVE |
