Foco12 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Foco12 (Food consumption QTL 12) Rattus norvegicus

Symbol: Foco12
Name: Food consumption QTL 12
RGD ID: 7411601
Trait: eating behavior trait   (VT:0001431)    
Measurement Type: feed conversion ratio   (CMO:0001312)    
LOD Score: 19.7
P Value: 0.001
Variance: 8.5
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2587,468,046 - 132,468,046RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0591,585,539 - 136,585,539RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0595,532,085 - 140,532,085RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4592,932,036 - 137,932,036RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
Body Weight  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Marissal-Arvy N, etal., Obesity (Silver Spring). 2013 Apr 17. doi: 10.1002/oby.20485.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2479Cyp4a2cytochrome P450, family 4, subfamily a, polypeptide 25128922355128934188Rat
2480Cyp4b1cytochrome P450, family 4, subfamily b, polypeptide 15129139019129176860Rat
2504Dio1iodothyronine deiodinase 15122074285122090983Rat
2078Ak4adenylate kinase 45116039222116099064Rat
3642Scp2sterol carrier protein 25122806949122881259Rat
61808Faahfatty acid amide hydrolase5129479774129499018Rat
3946Uroduroporphyrinogen decarboxylase5130464695130468783Rat
3602Rps6ribosomal protein S65101371716101374576Rat
2324Cdkn2bcyclin-dependent kinase inhibitor 2B5104009839104019082Rat
3453Ptprfprotein tyrosine phosphatase, receptor type, F5131741959131824000Rat
2865Ifnb1interferon beta 15103020969103021523Rat
620039Prdx1peroxiredoxin 15130147276130162850Rat
3001Leprleptin receptor5116294409116477904Rat
69056Jak1Janus kinase 15115780248115888841Rat
62039Plk3polo-like kinase 35130607142130612317Rat
3210Nrdcnardilysin convertase5123755807123818910Rat
620276Sh3gl2SH3 domain containing GRB2 like 2, endophilin A159965318999827500Rat
620239Kif2ckinesin family member 2C5130637347130662680Rat
631439Psip1PC4 and SFRS1 interacting protein 159784701097879280Rat
631442Cyp2j3cytochrome P450, family 2, subfamily j, polypeptide 35111219921111244987Rat
3316Pgm1phosphoglucomutase 15114595298114654728Rat
728909Pcsk9proprotein convertase subtilisin/kexin type 95121211278121233688Rat
68346Akr1a1aldo-keto reductase family 1 member A15130092945130130277Rat
621042Pik3r3phosphoinositide-3-kinase regulatory subunit 35129700925129772591Rat
621715Foxd3forkhead box D35114334693114337788Rat
3105Mpdzmultiple PDZ domain crumbs cell polarity complex component59576611295920531Rat
628846Cyp4a8cytochrome P450, family 4, subfamily a, polypeptide 85128702130128733476Rat
631435Orc1origin recognition complex, subunit 15123324273123348375Rat
620071Ipo13importin 135131433770131454044Rat
62015Nfibnuclear factor I/B59675920896973092Rat
628770Dab1DAB adaptor protein 15118392953119513625Rat
621245Plaaphospholipase A2, activating protein5109428600109460373Rat
620922Rab3bRAB3B, member RAS oncogene family5123629562123697410Rat
61910Rps8ribosomal protein S85130630362130632932Rat
621642Tie1tyrosine kinase with immunoglobulin-like and EGF-like domains 15132000013132019658Rat
620940Mllt3MLLT3, super elongation complex subunit5102259075102515447Rat
620952Pdzk1ip1PDZK1 interacting protein 15128618050128623131Rat
631356Cyp4a3cytochrome P450, family 4, subfamily a, polypeptide 35129097571129115488Rat
620477Cdc20cell division cycle 205131966203131970406Rat
621727Foxe3forkhead box E35128445594128446454Rat
620980TekTEK receptor tyrosine kinase5109607077109733805Rat
621139Bsndbarttin CLCNK type accessory subunit beta5121251774121260571Rat
628657Spata6spermatogenesis associated 65126593122126676557Rat
619820Mrpl37mitochondrial ribosomal protein L375121827892121846187Rat
619804RragaRas-related GTP binding A5101113341101114936Rat
3170Nfianuclear factor I/A5112436655112781878Rat
621427Artnartemin5131458596131470193Rat
620454Plpp3phospholipid phosphatase 35119927085120002206Rat
621502Ssbp3single stranded DNA binding protein 35121691370121828035Rat
1305172Snapc3small nuclear RNA activating complex, polypeptide 359781782797868494Rat
1305174Magohmago homolog, exon junction complex subunit5122639268122646650Rat
628650Slc24a2solute carrier family 24 member 25101499536101739337Rat
2325Cdkn2ccyclin-dependent kinase inhibitor 2C5124411123124416278Rat
620007Cyp2j4cytochrome P450, family 2, subfamily j, polypeptide 45111179981111207490Rat
1304814Klhl9kelch-like family member 95103333747103337931Rat
1304821Oma1OMA1 zinc metallopeptidase5118083728118136980Rat
628611Elavl2ELAV like RNA binding protein 25105960872106086539Rat
620893Prkaa2protein kinase AMP-activated catalytic subunit alpha 25119807992119879987Rat
1304972StilSTIL, centriolar assembly protein5128520837128573732Rat
2323Cdkn2acyclin-dependent kinase inhibitor 2A5103984949103992143Rat
2239C8bcomplement C8 beta chain5119535009119572565Rat
621034Leprotleptin receptor overlapping transcript5116289843116301951Rat
1303308Tspan1tetraspanin 15129646139129659383Rat
735206Yipf1Yip1 domain family, member 15122112144122147729Rat
620821Eif2b3eukaryotic translation initiation factor 2B subunit gamma5130492167130558692Rat
728889Plin2perilipin 25101156643101211738Rat
2398Cpt2carnitine palmitoyltransferase 25122664677122682126Rat
620045MutyhmutY DNA glycosylase5130274034130286149Rat
1304634Dph2diphthamide biosynthesis 25131428434131431394Rat
1304642Foxd2forkhead box D25128427986128430869Rat
1304573Mast2microtubule associated serine/threonine kinase 25129776293129915502Rat
619984Tesk2testis associated actin remodelling kinase 25130178715130270594Rat
68414St3gal3ST3 beta-galactoside alpha-2,3-sialyltransferase 35131470348131670794Rat
1307528Kdm4clysine demethylase 4C58810071088306821Rat
1306135Ifna1interferon, alpha 15103095767103098260Rat
1305550Eps15epidermal growth factor receptor pathway substrate 155124045865124146221Rat
1305552Med8mediator complex subunit 85131948632131949516Rat
2943JunJun proto-oncogene, AP-1 transcription factor subunit5109894175109897268Rat
1305442Tm2d1TM2 domain containing 15113020760113062370Rat
1306378Kdm4alysine demethylase 4A5131672754131719534Rat
1306334Ifna4interferon, alpha 45103069483103070052Rat
1306439Adamtsl1ADAMTS-like 1599964406100919786Rat
621243Slc6a9solute carrier family 6 member 95131374562131408733Rat
70987Faf1Fas associated factor 15124426032124790014Rat
1306748Tal1TAL bHLH transcription factor 1, erythroid differentiation factor5128586776128600976Rat
1306999Gpx7glutathione peroxidase 75123145151123153141Rat
1306418RasefRAS and EF hand domain containing58754890887619286Rat
1307066Tmem53transmembrane protein 535130721780130737692Rat
1305750Zdhhc21zinc finger DHHC-type palmitoyltransferase 2159722762197286866Rat
1307610Raver2ribonucleoprotein, PTB-binding 25115700985115780465Rat
1306529Dhcr2424-dehydrocholesterol reductase5121344637121368853Rat
1308525Echdc2enoyl CoA hydratase domain containing 25122915874122934860Rat
1304629Acer2alkaline ceramidase 25101391830101442615Rat
1306461Usp1ubiquitin specific peptidase 15113587564113598934Rat
1310014Hpdl4-hydroxyphenylpyruvate dioxygenase-like5130286627130288233Rat
1306981Frem1Fras1 related extracellular matrix 159732127597469523Rat
1305345Pars2prolyl-tRNA synthetase 2, mitochondrial5121433993121439158Rat
1305347RGD1305347similar to RIKEN cDNA 2610528J115132048687132051925Rat
1305987Uqcrhubiquinol-cytochrome c reductase hinge protein5129545978129554173Rat
1306299Ippintracisternal A particle-promoted polypeptide5129962528130001237Rat
1305729Lrp8LDL receptor related protein 85122563468122635434Rat
1305417Atpaf1ATP synthase mitochondrial F1 complex assembly factor 15129265789129293556Rat
1304802Frmd3FERM domain containing 358776460488032261Rat
68945Cyp4a1cytochrome P450, family 4, subfamily a, polypeptide 15129123323129137464Rat
3280Pde4bphosphodiesterase 4B5116799827117367707Rat
1332845Olr856olfactory receptor 8565132203917132204855Rat
1308101Cntlncentlein59929586599576402Rat
1333268Olr860olfactory receptor 8605132271846132272793Rat
1308030Glis1GLIS family zinc finger 15122222155122412141Rat
1309582Zyg11azyg-11 family member A, cell cycle regulator5122935439122973766Rat
1308303Atp6v0bATPase H+ transporting V0 subunit B5131423384131424900Rat
1333211Olr859olfactory receptor 8595132261753132265386Rat
1560539RGD1560539similar to interferon alpha 8/6 precursor; IFNa8/6 (B6)5103476362103477211Rat
1309148Dmac1distal membrane arm assembly component 158924117389243793Rat
1333931Olr855olfactory receptor 8555132186704132187651Rat
1311928Slc1a7solute carrier family 1 member 75122731003122775139Rat
1359481Tceanc2transcription elongation factor A N-terminal and central domain containing 25121923959121963018Rat
1309790Dock7dedicator of cytokinesis 75113599371113782871Rat
1308355C8acomplement C8 alpha chain5119583168119637675Rat
1311295Dmap1DNA methyltransferase 1-associated protein 15131143726131151760Rat
1334007Olr862olfactory receptor 8625132312678132313619Rat
1310856Zfyve9zinc finger FYVE-type containing 95123370677123529699Rat
1333113Olr868olfactory receptor 8685132462578132463525Rat
1310806Mmachcmetabolism of cobalamin associated C5130166056130172735Rat
1311508Osbpl9oxysterol binding protein-like 95123819106123962213Rat
1310339Hacd43-hydroxyacyl-CoA dehydratase 45102887597102915376Rat
1333331Olr865olfactory receptor 8655132373994132374941Rat
1311774Btf3l4basic transcription factor 3-like 45123569059123587593Rat
1333843Olr858olfactory receptor 8585132236461132237399Rat
1310770Cachd1cache domain containing 15115411833115637312Rat
1311787Mysm1myb-like, SWIRM and MPN domains 15109761345109826652Rat
1310741Zswim5zinc finger, SWIM-type containing 55130346519130463791Rat
1309039Ptch2patched 25130571956130592506Rat
1559493Lexmlymphocyte expansion molecule5121375998121401869Rat
1311027Dnai4dynein axonemal intermediate chain 45117787398117876140Rat
1309900Dnajc6DnaJ heat shock protein family (Hsp40) member C65116120069116283448Rat
1307821Mob3cMOB kinase activator 3C5129306255129315264Rat
1309796Dmrta1DMRT-like family A15104415893104422433Rat
1310694Bnc2basonuclin 259867907199079742Rat
1308173Dmrta2DMRT-like family A25124805883124811694Rat
1305797Ttc39btetratricopeptide repeat domain 39B59760332997708103Rat
1306799Usp24ubiquitin specific peptidase 245121080687121210321Rat
1311425Ifna2interferon alpha 25103258617103259195Rat
1310095Zfp353zinc finger protein 3535105075038105077359Rat
1309094Toe1target of EGR1, exonuclease5130270485130274050Rat
1308489Dennd4cDENN domain containing 4C5101272298101369529Rat
1310600Rad54lRAD54 like5129575431129605100Rat
1307635Kank4KN motif and ankyrin repeat domains 45113401491113465526Rat
1305960Txndc12thioredoxin domain containing 125123587854123612886Rat
1309987Hook1hook microtubule-tethering protein 15110824501110887791Rat
1308529Ttc4tetratricopeptide repeat domain 45121444714121462385Rat
1310114Mtapmethylthioadenosine phosphorylase5103873020103939406Rat
1310116Cmpk1cytidine/uridine monophosphate kinase 15128480301128507830Rat
1308265Dmbx1diencephalon/mesencephalon homeobox 15129394221129403040Rat
1309823Hectd3HECT domain E3 ubiquitin protein ligase 35130469841130479802Rat
1305762Ebna1bp2EBNA1 binding protein 25132148164132152730Rat
1310313Tmem59transmembrane protein 595121962507121983625Rat
1306630Cc2d1bcoiled-coil and C2 domain containing 1B5123353289123367343Rat
1307711Klf17Kruppel-like factor 175131293068131315878Rat
1309843Slc35d1solute carrier family 35 member D15117928628117981289Rat
1311383Slc5a9solute carrier family 5 member 95126709762126733468Rat
1307814Zyg11bzyg-11 family member B, cell cycle regulator5122985548123042735Rat
1308059Lurap1lleucine rich adaptor protein 1-like59536200595409439Rat
1308919Lrrc42leucine rich repeat containing 425122014678122035792Rat
1308616Szt2SZT2 subunit of KICSTOR complex5131897250131943953Rat
1308815Alg6ALG6, alpha-1,3-glucosyltransferase5114404972114454440Rat
1305274Coa7cytochrome c oxidase assembly factor 75123069356123080942Rat
1305358B4galt2beta-1,4-galactosyltransferase 25131412541131422573Rat
1310351Efcab14EF-hand calcium binding domain 145129218139129258628Rat
1310138Tut4terminal uridylyl transferase 45123201723123306582Rat
1310044Itgb3bpintegrin subunit beta 3 binding protein5114460217114525538Rat
1560884Ccdc171coiled-coil domain containing 17159791996598403853Rat
1359704Ift74intraflagellar transport 745109460372109563839Rat
1563046Cer1cerberus 1, DAN family BMP antagonist59730642797309783Rat
1563714Armh1armadillo-like helical domain containing 15130680955130722062Rat
1561242Cyp2j16cytochrome P450, family 2, subfamily j, polypeptide 165111089438111138918Rat
1565942Dynlt4dynein light chain Tctex-type 45130605417130607224Rat
1564021RGD1564021similar to high-mobility group box 159494831294948698Rat
1564486Ccdc163coiled-coil domain containing 1635130172014130178934Rat
1561416Hyihydroxypyruvate isomerase5131894575131897709Rat
1565225Ifna16l1interferon, alpha 16-like 15103216368103216984Rat
1560027Elavl4ELAV like RNA binding protein 45125056848125200543Rat
1563227Zfp352zinc finger protein 3525104946243104948087Rat
1334318Olr867olfactory receptor 8675132435679132436626Rat
1563467Cdcp2CUB domain containing protein 25121877581121894203Rat
1560983RGD1560983RGD15609835106906066106907230Rat
1561150RGD1561150similar to CPN10-like protein5107131587107131895Rat
1561569Tmem69transmembrane protein 695130004888130008466Rat
1560251Caap1caspase activity and apoptosis inhibitor 15109313253109414323Rat
1562337Mier1MIER1 transcriptional regulator5117876012117927592Rat
1563215Cyp2j10cytochrome P450, family 2, subfamily j, polypeptide 105110960319110995220Rat
1359312Ifna5interferon, alpha 55103187852103188430Rat
1559469Ror1receptor tyrosine kinase-like orphan receptor 15114744311115088155Rat
1562410Dppa3-ps2developmental pluripotency-associated 3, pseudogene 258809741888098963Rat
1311932Dynlt5dynein light chain Tctex-type family member 55117735509117758221Rat
1311937Tmem125transmembrane protein 1255132063162132064566Rat
1560146RGD1560146similar to hypothetical protein MGC348375111342381111411576Rat
1560921Dmrtb1DMRT-like family B with proline-rich C-terminal, 15122444853122452483Rat
1359609Naspnuclear autoantigenic sperm protein5130057363130083003Rat
1559603Mknk1MAPK interacting serine/threonine kinase 15129318128129357641Rat
1311069MplMPL proto-oncogene, thrombopoietin receptor5131973897131987472Rat
1561090Ptprdprotein tyrosine phosphatase, receptor type, D59004699390698977Rat
1559652Nsun4NOP2/Sun RNA methyltransferase 45129511224129532498Rat
1559786CzibCXXC motif containing zinc binding protein5122648333122657767Rat
1311126Ttc39atetratricopeptide repeat domain 39A5124165102124204973Rat
1311129Prpf38apre-mRNA processing factor 38A5123312461123324160Rat
1332921Olr866olfactory receptor 8665132407421132408368Rat
1311221Lrrc41leucine rich repeat containing 415129554547129575450Rat
628719Cyp4x1cytochrome P450, family 4, subfamily x, polypeptide 15128652844128683338Rat
1359429FggyFGGY carbohydrate kinase domain containing5110398866110786019Rat
1560173Ndc1NDC1 transmembrane nucleoporin5122155992122202295Rat
1359562Gpbp1l1GC-rich promoter binding protein 1-like 15130009773130050636Rat
1359584LOC298139similar to RIKEN cDNA 2310003M0158769273387706183Rat
1311849Focadfocadhesin5102564560102886587Rat
1561518Ttc22tetratricopeptide repeat domain 225121401973121423130Rat
1333749Olr857olfactory receptor 8575132216822132217769Rat
1560729RGD1560729similar to ribosomal protein S245104729321104730083Rat
1563440Mroh7maestro heat-like repeat family member 75121463826121509233Rat
1565362PatjPATJ, crumbs cell polarity complex component5113061985113364807Rat
1586386Trabd2bTraB domain containing 2B5127941198128158946Rat
1586416LOC688684similar to 60S ribosomal protein L325120631482120632245Rat
1587638LOC688541similar to protein disulfide isomerase-associated 558781125787866725Rat
1587504Skint10selection and upkeep of intraepithelial T cells 105127769022127811541Rat
1583724LOC500492similar to Interferon alpha-1 precursor5103320390103322719Rat
1359396Pomgnt1protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)5129634274129644150Rat
1584753Olfr1330-ps1olfactory receptor 1330, pseudogene 15132326454132327460Rat
1583723LOC500494similar to Glycylpeptide N-tetradecanoyltransferase 1 (Peptide N-myristoyltransferase 1) (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1) (Type I N-myristoyltransferase)5103658873103662295Rat
1582959LOC688948similar to ribosomal protein S265130239204130239590Rat
1564505Angptl3angiopoietin-like 35113703007113710044Rat
1586398LOC689902hypothetical protein LOC68990259519946895200056Rat
1583722LOC500497similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)5105085925105111382Rat
1587526LOC689854similar to H/ACA ribonucleoprotein complex subunit 4 (Dyskerin) (Nucleolar protein family A member 4) (snoRNP protein DKC1) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57)59432124594322841Rat
1587555LOC689825similar to zinc finger protein 5335127270721127271910Rat
1587570Rps4x-ps3ribosomal protein S4, X-linked, pseudogene 35126842634126843859Rat
1587579Skint1selection and upkeep of intraepithelial T cells 15126786469126814599Rat
1566327Skint4selection and upkeep of intraepithelial T cells 45126878834126909044Rat
1563375RGD1563375similar to small nuclear ribonucleoparticle-associated protein59365006293650836Rat
1562911Ccdc24coiled-coil domain containing 245131398766131412395Rat
1563332Eqtnequatorin5109734495109762048Rat
1565480Ube2uubiquitin conjugating enzyme E2 U5115118234115187296Rat
1561827RGD1561827similar to Interferon alpha-1 precursor5103196737103197803Rat
1584958Bend5BEN domain containing 55126290648126336662Rat
1565065Ifneinterferon, epsilon5103538001103627561Rat
1583986LOC690187similar to TGF beta-inducible nuclear protein 1 (CDK105 protein)59780175197802605Rat
1584354LOC686209similar to olfactory receptor 13405132250763132255279Rat
1583529Cks1lCDC28 protein kinase regulatory subunit 1-like5106982447106983199Rat
1559679RGD1559679similar to Interferon alpha-1 precursor5103300554103306107Rat
1562532RGD1562532hypothetical gene supported by BC0790575118000865118064520Rat
1562603RGD1562603hypothetical gene supported by NM_0316055128827304128852403Rat
1566001Lurap1leucine rich adaptor protein 15129618926129628651Rat
1584916LOC366447similar to farnesyl diphosphate synthetase5129169497129172588Rat
1584917LOC366444similar to Pyruvate kinase isozyme M25129079590129081630Rat
1584918LOC366442similar to Elongation FacTor family member (eft-4)5127824597127825986Rat
1561246RGD1561246similar to put. precursor MuIFN-alpha 55103144519103145654Rat
1584919LOC366436similar to Beta-enolase (2-phospho-D-glycerate hydro-lyase) (Muscle-specific enolase) (MSE) (Skeletal muscle enolase) (Enolase 3)5124325978124327290Rat
1584921LOC366424similar to NADH dehydrogenase (ubiquinone) Fe-S protein 25118333499118337190Rat
1584923LOC366414similar to 40S ribosomal protein S7 (S8)5105902114105902692Rat
1584925LOC366410similar to RIKEN cDNA 4933403M225104595779104597302Rat
1565987RGD1565987similar to F-box and leucine-rich repeat protein 1859546048095464873Rat
1564957Sgip1SH3GL interacting endocytic adaptor 15117536752117734593Rat
1585948Cfap57cilia and flagella associated protein 575132074404132148102Rat
1591391LOC685622similar to non-SMC element 1 homolog5114291743114292689Rat
1589969LOC689609similar to 60S ribosomal protein L958836086588361547Rat
1592786LOC682958similar to keratin complex 1, acidic, gene 185118885696118887657Rat
1591357Kti12KTI12 chromatin associated homolog5123601059123602581Rat
1586071LOC366396similar to ribosomal protein S1259773158297731984Rat
1586073LOC366391hypothetical LOC36639159302161393023608Rat
1587085LOC679598hypothetical protein LOC6795985132042844132043482Rat
1587151Elovl1ELOVL fatty acid elongase 15131961478131965961Rat
1591090Calr4calreticulin 45123986870124022436Rat
1592089LOC298257similar to TBC1 domain family, member 55111564652111573058Rat
1592090LOC298245similar to Nhp2 non-histone chromosome protein 2-like 15107912017107912407Rat
1591038LOC689589hypothetical protein LOC6895895124276074124295881Rat
1585925LOC679664similar to Peptidyl-prolyl cis-trans isomerase A (PPIase) (Rotamase) (Cyclophilin A) (Cyclosporin A-binding protein) (P31) (p1B15)59961185299612369Rat
1585134Tex38testis expressed 385129260652129265086Rat
1585888LOC680901hypothetical protein LOC6809015105313273105321698Rat
1587100LOC679583similar to UPF0197 protein C11orf10 homolog5132041753132042174Rat
1587828LOC685946similar to PRAME family member DJ1198H6.25116594690116601043Rat
1359194Fam151afamily with sequence similarity 151, member A5121514804121527555Rat
1589875LOC690903similar to Interferon alpha-1 precursor5103104672103105585Rat
1584843LOC502977similar to cytoplasmic beta-actin5120658714120659243Rat
1589947Vom2r-ps76vomeronasal 2 receptor, pseudogene 7658869625688791737Rat
1583684LOC679803similar to olfactory receptor Olr8695132345164132346165Rat
1583685Saxo1stabilizer of axonemal microtubules 15100937134101093308Rat
1561825Efcab7EF-hand calcium binding domain 75114525403114576130Rat
1589924LOC689654similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)58926144489263004Rat
1587537LOC689843similar to Aldose reductase-related protein 2 (AR) (Aldehyde reductase) (Fibroblast growth factor regulated protein) (FR-1 protein)59428666894291222Rat
1584061Kncnkinocilin5129362483129365964Rat
1564074Fyb2FYN binding protein 25119677116119800911Rat
1588220Hspd1-ps14heat shock protein 1, pseudogene 145104129384104131678Rat
1597398Ldlrad1low density lipoprotein receptor class A domain containing 15121984245122000941Rat
1596413Hspb11heat shock protein family B (small), member 115122035588122062421Rat
1597451Cyb5rlcytochrome b5 reductase-like5121846223121868287Rat
1595093L1td1LINE-1 type transposase domain containing 15113379808113386088Rat
1598323Atg4cautophagy related 4C, cysteine peptidase5113867218113935534Rat
1596200Best4bestrophin 45130622194130629045Rat
1593542Shisal2ashisa like 2A5123110547123126842Rat
1591722Lrrc19leucine rich repeat containing 195109497503109502488Rat
1593266Tyrp1tyrosinase-related protein 159528098295299516Rat
1596047LOC690462hypothetical protein LOC6904625130966577130967555Rat
1591738LOC680462similar to ribosomal protein S245103343786103344309Rat
1593804LOC685453hypothetical protein LOC6854535113944483113964565Rat
1588696Skint8selection and upkeep of intraepithelial T cells 85126764502126773125Rat
1595859Eri3ERI1 exoribonuclease family member 35131016146131143347Rat
1597473LOC689013similar to Protein FAM57B5121681560121682371Rat
1598210Rnf220ring finger protein 2205130739173130961386Rat
1598211Ccdc17coiled-coil domain containing 175130051158130056676Rat
1597743LOC685139similar to BWK-15111562436111563265Rat
2320392LOC100364773hypothetical LOC10036477359323345393237397Rat
2318140LOC100362448hypothetical LOC1003624485114217624114218000Rat
2318761LOC100362122selection and upkeep of intraepithelial T cells 3-like5126999449127181460Rat
2318892LOC100362090ribosomal protein L36-like5132457835132458216Rat
2318341LOC100362345hypothetical protein LOC1003623455103767094103767986Rat
2318487LOC100362298ribosomal protein S18-like5112997100112997655Rat
2320529Btbd19BTB domain containing 195130596966130605403Rat
2320713LOC100361148ribosomal protein S20-like5130298198130298740Rat
2321596Rnf11l1ring finger protein 11-like 15124212433124243125Rat
2323226LOC100363317signal peptidase complex subunit 2 homolog5106913633106915036Rat
2324467Izumo3IZUMO family member 35106874321106876978Rat
2325348Mir101amicroRNA 101a5115966332115966406Rat
2325363Mir872microRNA 8725109539086109539166Rat
2325391Mir31microRNA 315103599038103599143Rat
2325411Mir761microRNA 7615123776534123776609Rat
4888605Mir3554microRNA 35545103599032103599149Rat
2324587LOC100363867LRRGT00106-like5121870102121870527Rat
2324815Acot11acyl-CoA thioesterase 115121523833121581699Rat
2324835LOC100363054malate dehydrogenase 2, NAD (mitochondrial)58998218289984494Rat
6487214LOC100912356interferon alpha-1-like5103227820103230500Rat
6487699LOC100912314interferon alpha-1-like5103285510103288640Rat
6486125LOC100912642cytochrome P450 2J3-like5110908195110930402Rat
6491750P3r3urfPIK3R3 upstream open reading frame5129656654129673140Rat
6492384LOC100911527interferon alpha-12-like5103524733103525302Rat
6494360LOC100911221uncharacterized LOC1009112215109897523109949196Rat
6490490LOC100911818selection and upkeep of intraepithelial T-cells protein 10-like5127636227127678245Rat
6490949LOC100911772selection and upkeep of intraepithelial T-cells protein 5-like5127320857127514355Rat
6493177Agbl4AGBL carboxypeptidase 45125254963126534367Rat
6502836LOC100909643interferon alpha-1-like5103273737103275988Rat
6500146LOC100910116transcription factor BTF3-like5122951278122951824Rat
6500251LOC100910132PRAME family member 12-like5116534373116537110Rat
6497739LOC100910621uncharacterized LOC1009106215123528822123554132Rat
6497980LOC100910558uncharacterized LOC10091055859697618197014187Rat
6498231LOC10091046160 kDa heat shock protein, mitochondrial-like5106398781106403426Rat
6498356LOC100910489kinectin-like5105565480105575498Rat
7497822LOC102547167uncharacterized LOC1025471675121057292121078382Rat
7514994LOC102556219uncharacterized LOC1025562195113969322113977654Rat
7506262LOC102551042uncharacterized LOC1025510425122296655122299913Rat
7509921LOC102556039uncharacterized LOC10255603959528349895314373Rat
7502785LOC102553524uncharacterized LOC1025535245112230510112246625Rat
7648089LOC102550175uncharacterized LOC1025501755120326955120333694Rat
7649714LOC102550980uncharacterized LOC1025509805130311847130319039Rat
7558064LOC102555405uncharacterized LOC10255540559296352893021460Rat
7559302LOC102553423uncharacterized LOC1025534235131809376131814053Rat
7559665LOC102552337PRAME family member 22-like5116613783116615014Rat
7654450LOC102547236uncharacterized LOC1025472365119668167119673199Rat
7638959LOC10255530740S ribosomal protein S12-like5130485611130486622Rat
7625538LOC102554074uncharacterized LOC1025540745131986391131999442Rat
7641114LOC102556040noelin-like5113759457113762136Rat
7660377LOC102547623uncharacterized LOC1025476235101226928101245243Rat
7645046LOC102556374uncharacterized LOC1025563745114332364114334002Rat
7592700LOC102554351uncharacterized LOC1025543515106358753106371776Rat
7593337LOC102550339uncharacterized LOC1025503395110107244110110709Rat
7543605LOC102546952uncharacterized LOC1025469525108270998108359486Rat
7556402LOC102548249uncharacterized LOC1025482495117352521117412598Rat
7545693Podnpodocan5122774536122796755Rat
7546204LOC102548397ankyrin repeat domain-containing protein 13C-like5127376753127380494Rat
7561791LOC102548251uncharacterized LOC1025482515124800951124807191Rat
7548488LOC102551560uncharacterized LOC1025515605122474642122476368Rat
7604289LOC102549668uncharacterized LOC1025496685120006217120012535Rat
7585186LOC102552694zinc finger CCCH-type antiviral protein 1-like5122692573122699273Rat
7691700LOC102553953uncharacterized LOC1025539535131201325131203990Rat
7694123LOC102551858uncharacterized LOC10255185859706604597072072Rat
7738149LOC10255467240S ribosomal protein S27-like5123216877123218666Rat
7697001LOC102554261high mobility group protein B1-like5106228556106229116Rat
7697358LOC102552523uncharacterized LOC1025525235104019105104127037Rat
7743271LOC102552278uncharacterized LOC10255227859751279797520488Rat
7699232LOC102549026protein DEK-like5127636795127645699Rat
7670779LOC102552173protein DBF4 homolog A-like59742126497424352Rat
7746436LOC102555669uncharacterized LOC10255566959307964493197365Rat
7747039LOC102553361uncharacterized LOC1025533615131535622131540841Rat
7747960Insl5insulin like 55117773104117777376Rat
7703644LOC102554881uncharacterized LOC10255488159236841092380389Rat
9097677LOC103692449uncharacterized protein-like5119140608119141297Rat
9186911LOC103690754zinc finger protein 606-like5131226565131228325Rat
9112029LOC10369243660S ribosomal protein L28-like5121868202121868751Rat
9161289LOC103692433uncharacterized LOC1036924335120344175120357630Rat
9120358LOC103692409non-histone chromosomal protein HMG-17-like59405577094062563Rat
9171422LOC103692447chromatin assembly factor 1 subunit A-like5116514762116515846Rat
9071259LOC103692399uncharacterized LOC10369239959925428299256197Rat
9354806LOC103692460uncharacterized LOC1036924605131970623131974793Rat
9284656LOC103692415uncharacterized LOC1036924155108723428108734153Rat
9264036LOC103692427uncharacterized LOC1036924275117278306117329847Rat
9390410LOC103692428small EDRK-rich factor 2 pseudogene5117764116117764318Rat
9404082LOC103692411uncharacterized LOC1036924115104410856104415793Rat
9408812LOC103692393uncharacterized LOC10369239359716511397170168Rat
9409380LOC103692392uncharacterized LOC10369239259677105896771421Rat
9417869LOC103692418uncharacterized LOC1036924185110605125110712729Rat
11473324LOC10835110240S ribosomal protein S20 pseudogene5101460139101460978Rat
11474955LOC108350993uncharacterized LOC10835099359847835098487366Rat
11475977Trnah-gug10transfer RNA histidine (anticodon GUG) 1059708722797087298Rat
11457244Trnap-agg7transfer RNA proline (anticodon AGG) 75129690563129690637Rat
11458786LOC108350991uncharacterized LOC10835099159566871795710953Rat
11459931LOC108350995uncharacterized LOC1083509955102119628102128446Rat
11383635LOC108351136uncharacterized LOC1083511365109866403109876222Rat
11405418LOC10835113240S ribosomal protein S29-like59776436997764539Rat
11413299LOC108350998uncharacterized LOC1083509985103757997103779881Rat
11413524LOC108351007uncharacterized LOC1083510075117271236117278283Rat
11413852LOC108351005uncharacterized LOC1083510055112797944112805529Rat
11416818LOC108351001uncharacterized LOC1083510015106877052106903186Rat
11418076LOC108351000uncharacterized LOC1083510005106922423106936905Rat
11418089LOC108351004uncharacterized LOC1083510045109851042109866282Rat
11421297LOC108351104PRAME family member 12-like5116480878116483954Rat
11398866LOC108351105uncharacterized LOC1083511055128430904128442177Rat
11410745LOC108351012uncharacterized LOC1083510125123999719124012690Rat
11380122LOC108351070small ubiquitin-related modifier 2 pseudogene5119732630119735272Rat
11380980LOC108351016selection and upkeep of intraepithelial T-cells protein 6-like5127381307127435697Rat
11381374LOC108350987COMM domain-containing protein 2 pseudogene58802717288030854Rat
11381498LOC108351103ferritin light chain 1 pseudogene5111247525111248020Rat
11502494LOC108351096dnaJ homolog subfamily B member 1 pseudogene58768168087682686Rat
11479750LOC108351020uncharacterized LOC1083510205132160198132164045Rat
11499899LOC10835110140S ribosomal protein S17 pseudogene59779048697794517Rat
11492083LOC108350992uncharacterized LOC10835099259780677697812220Rat
41322042LOC120103086ferritin heavy chain-like59508626195087200Rat
41379561LOC120103247U7 small nuclear RNA59922995599230058Rat
41379665LOC120102936uncharacterized LOC1201029365116198317116217439Rat
41086853LOC120103368U4 spliceosomal RNA5124264229124264369Rat
41167909LOC120102926uncharacterized LOC1201029265110586644110592691Rat
41140167LOC120103164interferon alpha-12-like5103509610103510260Rat
41168764LOC120103291small nucleolar RNA SNORA4859520289795203037Rat
41250028LOC120103276small nucleolar RNA SNORA2/SNORA34 family5122726968122727103Rat
41284048LOC120103366small nucleolar RNA U35118248246118248345Rat
41141437LOC120102927uncharacterized LOC1201029275110790119110818856Rat
41169774LOC120102947uncharacterized LOC1201029475121856050121859503Rat
41170167LOC120103094histone H3.3-like5128921288128921701Rat
41170419LOC120102912phosphoglycerate mutase 1-like59968598999686573Rat
41205584LOC120103255small nucleolar RNA SNORD55/SNORD395130632614130632692Rat
41279671LOC120103158interferon alpha-12-like5103378576103379147Rat
41326116LOC120103189U6 spliceosomal RNA5130107105130107211Rat
41358010LOC12010291760S ribosomal protein L19-like5108333257108335787Rat
41358446LOC120102922uncharacterized LOC1201029225109999528110003332Rat
41385175LOC120103092E3 ubiquitin ligase TRAF3IP2-like5127813498127814580Rat
41142637LOC120103155uncharacterized LOC12010315559306583793073188Rat
41171666LOC120103203U6 spliceosomal RNA5103109366103109474Rat
41172741LOC120102933uncharacterized LOC1201029335115914125115916368Rat
41326971LOC120102956iron-sulfur cluster assembly 1 homolog, mitochondrial-like5131247516131248341Rat
41360960LOC12010311960S ribosomal protein L9-like5123483635123484270Rat
41092901LOC120102935uncharacterized LOC1201029355115975885115978833Rat
41145427LOC120103327small nucleolar RNA SNORA1758750390987504029Rat
41145702LOC120103235U1 spliceosomal RNA5110355813110355974Rat
41260363LOC120102910uncharacterized LOC1201029105104171383104185974Rat
41361409LOC120103257U1 spliceosomal RNA5117340131117340290Rat
41361854LOC12010309160S ribosomal protein L9-like5115982278115982849Rat
41388855LOC120103383U6 spliceosomal RNA5105346075105346181Rat
41174391LOC120103096histone H3.3-like5129008176129008589Rat
41175373LOC120103115uncharacterized LOC1201031155112244680112248682Rat
41260485LOC120102944uncharacterized LOC1201029445121408508121412443Rat
41390291LOC120102957uncharacterized LOC1201029575131411481131417615Rat
41096017LOC120103093pyruvate kinase PKM-like5128906060128907436Rat
41119943LOC120102959uncharacterized LOC1201029595131567330131572307Rat
41187183LOC120103157uncharacterized LOC12010315759910482899119859Rat
41364653LOC120102941uncharacterized LOC1201029415120664956120672754Rat
41391363LOC120103376U5 spliceosomal RNA5130667018130667133Rat
41097131LOC120103161interferon alpha-12-like5103441204103442180Rat
41097146LOC120102907uncharacterized LOC1201029075103901281103925151Rat
41097241LOC120103318small nucleolar RNA SNORA175105738478105738609Rat
41150489LOC120103377U5 spliceosomal RNA5130673379130673494Rat
41264577LOC120103306small nucleolar RNA SNORA175124306820124306946Rat
41366809LOC120102953cytochrome P450 4A25129010501129021087Rat
41123726LOC120103118HMG-Y-related protein A-like5123332484123354542Rat
41215040LOC120102919uncharacterized LOC1201029195108831467108907138Rat
41367836LOC120102934uncharacterized LOC1201029345115963226115977411Rat
41394140LOC120103266small Cajal body-specific RNA 85101124125101124255Rat
41394229LOC120102921uncharacterized LOC1201029215109883550109887133Rat
41394794LOC120103236U6 spliceosomal RNA5107652473107652571Rat
41155933LOC120103302small nucleolar RNA SNORA1758857255288572680Rat
41215575LOC120102929ubiquitin carboxyl-terminal hydrolase 15-like5113559958113563874Rat
41216010NEWGENE_40934091transfer RNA alanine (anticodon AGC)5130664760130664832Rat
41344762LOC120103084developmentally-regulated GTP-binding protein 1-like59089386490972201Rat
41126986LOC120102952uncharacterized LOC1201029525128612314128619258Rat
41345979LOC120103122uncharacterized LOC1201031225129690639129700956Rat
41346487LOC120103168uncharacterized LOC1201031685116670973116707048Rat
41371967LOC120103064uncharacterized LOC12010306459112235491641754Rat
41398222LOC120103116uncharacterized LOC1201031165118861720118905161Rat
41398365LOC120103349small nucleolar RNA SNORA405123218554123218681Rat
41183840LOC120102906uncharacterized LOC1201029065102229484102238875Rat
40980304LOC120103169uncharacterized LOC1201031695119673292119674938Rat
41196424LOC12010296360S ribosomal protein L21-like5132123799132128190Rat
41291644LOC120103379U6 spliceosomal RNA5129832346129832452Rat
41373478LOC120103197U6 spliceosomal RNA5115097451115097553Rat
41400278NEWGENE_40926764transfer RNA proline (anticodon AGG)5128635289128635369Rat
41104723LOC120103225U6 spliceosomal RNA5123280963123281069Rat
41105011LOC120103262small nucleolar RNA SNORD385130630642130630711Rat
41128577LOC120103082high mobility group protein B2-like58887382988874342Rat
41129082LOC120102903POU domain, class 4, transcription factor 1-like59787877297883186Rat
41129363LOC120102961uncharacterized LOC1201029615131488481131492415Rat
41162071LOC120103160interferon alpha-12-like5103426092103427016Rat
41197686LOC120103216U6 spliceosomal RNA5115066080115066186Rat
41229778LOC120103317small nucleolar RNA SNORA175103919376103919499Rat
41271559LOC120103206U6 spliceosomal RNA5131979522131979625Rat
41350661LOC120103254small nucleolar RNA SNORA705115961775115961902Rat
41351766LOC120102955uncharacterized LOC1201029555129263054129265721Rat
41375413LOC120103264small nucleolar RNA SNORD465130632015130632118Rat
41402458LOC120102924uncharacterized LOC1201029245110208856110225659Rat
41107926LOC120103114uncharacterized LOC1201031145112416267112442856Rat
41108077LOC120102928uncharacterized LOC1201029285113530232113546618Rat
41164037LOC120103159interferon alpha-12-like5103407135103407884Rat
41199780LOC120103232U6 spliceosomal RNA5130338326130338430Rat
41296488LOC120102939uncharacterized LOC1201029395119887232119888833Rat
41085030LOC120103085zinc finger CCHC domain-containing protein 9-like59239049992406353Rat
40944816LOC120102913uncharacterized LOC1201029135106613937106645065Rat
40971150LOC120103321small nucleolar RNA SNORA1759583074095830865Rat
40998077LOC120102943uncharacterized LOC1201029435121360322121364747Rat
40972972LOC120102902protein PRRC2C-like59555314795562018Rat
40974238LOC120103188U6 spliceosomal RNA59841452898414634Rat
41015876LOC120102951uncharacterized LOC1201029515128269299128297520Rat
41016107LOC120103348small nucleolar RNA SNORA1759748166497481780Rat
41339692LOC120102954cytochrome P450 4A2-like5128967020128975566Rat
41340414LOC120103217U6 spliceosomal RNA5115816834115816936Rat
40952488LOC12010312360S ribosomal protein L18-like5130421387130428225Rat
40975974LOC120103162interferon alpha-1-like5103455380103455934Rat
41012570LOC120103241U7 small nuclear RNA5111397995111398057Rat
41012747LOC120103378U5 spliceosomal RNA5130680654130680769Rat
41013620LOC120103083conserved oligomeric Golgi complex subunit 5-like59064539790816683Rat
40980620LOC120103171cytochrome P450 4A2-like5129053886129062415Rat
40929618LOC120102923uncharacterized LOC1201029235110179996110186201Rat
40957686LOC120102904ladinin-1-like59825993498274752Rat
40981232LOC120102914malignant T-cell-amplified sequence 1-like5128728574128729067Rat
40981943LOC12010293060S ribosomal protein L15-like5113792289113793252Rat
40982088LOC120103090cytochrome P450 2J2-like5111007780111057797Rat
40958085LOC120102950uncharacterized LOC1201029505124196081124203291Rat
40962025LOC120102958uncharacterized LOC1201029585131424452131427443Rat
40985797NEWGENE_40934091transfer RNA alanine (anticodon AGC)5121943838121943912Rat
40986348LOC120102962uncharacterized LOC1201029625131488037131489093Rat
40937057LOC120103250U7 small nuclear RNA5122542313122542380Rat
40937684LOC120102920uncharacterized LOC1201029205109330329109338769Rat
40988753LOC120103293small nucleolar RNA SNORA485120966305120966422Rat
40989424LOC120103252small nucleolar RNA SNORA705109807447109807582Rat
40966355LOC120103290small nucleolar RNA SNORA485111718328111718474Rat
40993322LOC120102909uncharacterized LOC1201029095104003107104016993Rat
40994510LOC120102938metallothionein-2-like5119728976119732537Rat
40970507LOC120102945uncharacterized LOC1201029455121621354121625108Rat
41046330LOC120103278small nucleolar RNA SNORA95112966475112966607Rat
41074883Tusc1tumor suppressor candidate 15108089952108091636Rat
41075354LOC120103199U6 spliceosomal RNA5129952187129952290Rat
41311458LOC120102949elongin-C-like5124125937124127436Rat
41311684LOC120102948uncharacterized LOC1201029485122301858122302471Rat
41024711LOC120103163interferon alpha-12-like5103494442103495077Rat
41244502LOC120103173iron-sulfur cluster assembly 1 homolog, mitochondrial-like5131198540131199066Rat
41025543LOC120103209U6 spliceosomal RNA59060509090605193Rat
41025698LOC120102932uncharacterized LOC1201029325115683207115693880Rat
41078950LOC120103223U6 spliceosomal RNA5122805182122805288Rat
41245337LOC12010309760S ribosomal protein L7a-like5129956798129962912Rat
41245460LOC120093079olfactory receptor 2A12-like5132293815132294801Rat
41245849LOC120103242U7 small nuclear RNA5111531726111531787Rat
41245892LOC120103095pyruvate kinase PKM-like5128992798128994173Rat
41246695LOC120103263small nucleolar RNA SNORD385130631069130631136Rat
41316176LOC120103312small nucleolar RNA SNORA175102483194102483318Rat
41316576LOC120103249U7 small nuclear RNA5111531651111531712Rat
41051438Tmem275transmembrane protein 2755129376468129379282Rat
41134400LOC120103170uncharacterized LOC1201031705120785823120801032Rat
41247414LOC120102937uncharacterized LOC1201029375119526679119538134Rat
41029367LOC12010308760S ribosomal protein L27a-like5103328721103329166Rat
41030934LOC12010311760S ribosomal protein L9-like5123193865123195154Rat
41255483LOC120103088peptidyl-prolyl cis-trans isomerase A-like5105600882105603060Rat
41332442LOC120103156uncharacterized LOC12010315659638721896389315Rat
41136247LOC12010291560S ribosomal protein L5-like5107212048107217257Rat
41143086LOC120103387U6 spliceosomal RNA5106129987106130093Rat
41055101LOC120102905uncharacterized LOC1201029055101831467101846644Rat
41144701LOC120102901uncharacterized LOC12010290158759930187602345Rat
41222521LOC120103120uncharacterized LOC1201031205123927866123939165Rat
41034517LOC120103165GSK3B-interacting protein-like5103941903103943310Rat
41224678LOC120103289U2 spliceosomal RNA5120473916120474106Rat
41337561LOC120103121uncharacterized LOC1201031215123891920123896857Rat
41337843LOC120102960uncharacterized LOC1201029605131587421131591432Rat
41334530LOC120102946uncharacterized LOC1201029465121688135121689649Rat
41235371LOC12010308960S ribosomal protein L8-like5109207408109230540Rat
41302851LOC120103238U6 spliceosomal RNA5123754011123754111Rat
41069231LOC120103166uncharacterized LOC1201031665106108110106109796Rat
41308087LOC120102940uncharacterized LOC1201029405119967274119994416Rat
41044958LOC120103373U4 spliceosomal RNA59625456696254697Rat
41074433LOC120103372U4 spliceosomal RNA5103532146103532302Rat
41241770LOC120102925uncharacterized LOC1201029255110819794110824522Rat
41309747LOC120103065uncharacterized LOC12010306559097382590991561Rat
41023677LOC120103113uncharacterized LOC1201031135112492479112512005Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10262D5Rhm31335119564714119564847Ratregion
10263D5Rhm41455119592239119592384Ratregion
10321D5Lev171235103991975103992098Ratregion
10324D5Lev191835124411616124411799Ratregion
10453D5Mcw15129098900129099033Ratregion
10453D5Mcw15128924597128924722Ratregion
10454D5Wox121185129098910129099034Ratregion
10454D5Wox121185128924607128924723Ratregion
10826D5Mgh231225109897808109897936Ratregion
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5135467D5Uwm711855126673617126673763Ratregion
5135469D5Uwm722605125008980125009222Ratregion
5502701C1orf1651175126329451126329568Ratregion
5503196mActb05120658368120658774Ratregion
5503142PTPRD059006061290061733Ratregion
5503256UniSTS:23755610885130645951130647039Ratregion
5503958UniSTS:2569462675109895884109896151Ratregion
5504068px-5c81565125426959125427115Ratregion
5507643Dio15835122091100122091683Ratregion
5503680ELAVL2__75779485105962550105963498Ratregion
5503845Nmt12795103658564103658845Ratregion
5504010px-21e121355106315971106316106Ratregion
5503992Dmrtb105122447528122448797Ratregion
5504626PMC316663P32395104015134104015373Ratregion
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5504849ha25056535120716698120717351Ratregion
5504859ha253105114606869114607662Ratregion
5505042Mpl8625131985255131986117Ratregion
5505686UniSTS:4893139545132254325132255279Ratregion
5505921UniSTS:496549945131966929131967934Ratregion
5506177UniSTS:498727675132005377132005444Ratregion
5506246UniSTS:50244205117970947117971573Ratregion
5506234Ndufs21215118333343118333464Ratregion
5506715SCP2965122868632122868728Ratregion
5506873G4707122259981947399819695Ratregion
5507013fj50d02.y12385131745458131745796Ratregion
5507059UniSTS:2242831045131423456131423560Ratregion
5507117UniSTS:22460315959895565698955815Ratregion
5507169UniSTS:2249081775131743133131743310Ratregion
5499675MARC_7377-7378:992008389:13855129639150129639535Ratregion
5499851UniSTS:2349962235123367012123367235Ratregion
5501398Mpdz059587464695875800Ratregion
5500262D1S2299E875125058161125058248Ratregion
5499843UniSTS:2349692875113335953113336240Ratregion
5499845UniSTS:2349673385113385613113385951Ratregion
5500515RH135495975113703231113703328Ratregion
5500368GDB:3526881095119547438119547547Ratregion
5500599RH1361501995130058470130059440Ratregion
5501179PMC152255P11485103991982103992130Ratregion
5501205PMC153970P11565109895405109895561Ratregion
5501127PMC141153P12705124415101124415371Ratregion
5501131PMC141153P23365124411869124412205Ratregion
5504698PMC55707P110055109895405109896410Ratregion
5504926Nfib5259696342296963474Ratregion
5505275Elavl24705105962958105963428Ratregion
5505275Elavl24705105962786105963428Ratregion
5501816MARC_13905-13906:1007570719:16495130471126130471775Ratregion
5505812UniSTS:49540514285131693710131695138Ratregion
5506509AL0093641495113751250113751399Ratregion
5501940MARC_17865-17866:1025013775:148759676516596765652Ratregion
5502172MARC_7381-7382:996687840:1985129484171129485414Ratregion
5502174MARC_7369-7370:996687826:16505131416164131416814Ratregion
5501980MARC_21798-21799:1025034200:11015130267477130267793Ratregion
5501998MARC_23422-23423:1025023955:36175130586175130586792Ratregion
5502224G64294150359248199492483497Ratregion
5502311RH1243872305101369255101369485Ratregion
5502321RH12445215059432170494321854Ratregion
5502355RH1245661025117703291117703393Ratregion
5502405RH1247451585124789789124789947Ratregion
6480632D5Uwm741855127833594127833751Ratregion
6480634D5Uwm755805124712419124712918Ratregion
Position Markers

Peak: (D5Rat71)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25109,967,940 - 109,968,152 (+)MAPPER
Rnor_6.05114,085,434 - 114,085,645NCBI
Rnor_5.05118,031,980 - 118,032,191UniSTS
RGSC_v3.45115,431,931 - 115,432,142UniSTS
RGSC_v3.45115,431,930 - 115,432,142RGD
RGSC_v3.15115,437,157 - 115,437,368RGD
Celera5108,583,854 - 108,584,065UniSTS
RH 3.4 Map5779.3RGD
RH 3.4 Map5779.3UniSTS
RH 2.0 Map5702.6RGD
FHH x ACI Map554.59RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)534730116104251008Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)534944474113558310Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
9589025Epfw7Epididymal fat weight QTL 720.660.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)54946360094463600Rat
7411561Bw134Body weight QTL 134240.001body mass (VT:0001259)body weight gain (CMO:0000420)54946360094463600Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
2303615Vencon7Ventilatory control QTL 70.001respiration trait (VT:0001943)respiration rate (CMO:0000289)55098389595983895Rat
2303574Gluco42Glucose level QTL 422blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)55349671998496719Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)555715622100715622Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)558829236128034027Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
2316954Rf57Renal function QTL 570kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)55979352890450144Rat
2316957Pur21Proteinuria QTL 216.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)559793528113558156Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)56029343498603051Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
2290005Mcs24Mammary carcinoma susceptibility QTL 24mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)564719390109719390Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)566174080124160948Rat
2312671Scl64Serum cholesterol level QTL 640.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)568984307104251008Rat
61380Edpm5Estrogen-dependent pituitary mass QTL 54.50.92pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)568984307104251008Rat
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)568984307104251008Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
2302381Bw84Body weight QTL 844.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)569540295151018848Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)579584860124584860Rat
1598846Bp293Blood pressure QTL 2933.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)579584860124584860Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)579584860124584860Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1331782Rf36Renal function QTL 363.296kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)58384059897059958Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)584132602129132602Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)587468046132468046Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)587765973132765973Rat
1358889Bp261Blood pressure QTL 2612.86arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)590067849128034027Rat
1358909Kidm25Kidney mass QTL 251.87kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)590067849128034027Rat
631527Tls1T-lymphoma susceptibility QTL 100.001thymus integrity trait (VT:0010555)post-insult time to onset of T-cell lymphoma (CMO:0001907)590450144135450144Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)597059760147465714Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)597570330136479578Rat
1582212Livw2Liver weight QTL 23.50.0004liver mass (VT:0003402)liver weight as percentage of body weight (CMO:0000141)599016066119085810Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)599216724148607142Rat
1600362Mcs19Mammary carcinoma susceptibility QTL 192.5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)599485997103690167Rat
7394708Emca11Estrogen-induced mammary cancer QTL 11mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)599753548113061097Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)5103689353148689353Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5105999803150999803Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5106906205151906205Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5106906205151906205Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5106906205151906205Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5106906205151906205Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5106906205151906205Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5108845856153845856Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5108845856153845856Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)5108938288153938288Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5111416838156416838Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5111416838156416838Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5111416838156416838Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5111416838156416838Rat
7794743Bp373Blood pressure QTL 3730.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5112175546116047089Rat
7794739Bp372Blood pressure QTL 3720.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5117913688125222967Rat
1582230Bw78Body weight QTL 783.20.0016epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)5119085612128034027Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5120740824143608494Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5120740824151018848Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5121846814166846814Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5124160767133749643Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5125392826139989768Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5127798274166875058Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5127798274166875058Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5128033842133011550Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5128506074166875058Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5129132428143070159Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5129132447151006154Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5131345754166875058Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross 7401255
qtl_general measurement method: At 16 weeks of age animals were individually housed and given self-selection diet (protein, carbohydrate and fat diet in three separate cups); percentage of carbohydrate intake calculated as the relative amount of calories provided by carbohydrates against total calories consumed 7401255
qtl_general carbohydrate and fat intake are highly correlated 7401255
qtl_general software package used: multiple interval mapping (MIM); MultiQTL software (version 2.6); ANOVA 7401255
qtl_general number of animals used: 94 F2 females 7401255
qtl_map spans from 48.4-123.5 Mb; peak at 85.9 Mb 7401255