Tls1 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Tls1 (T-lymphoma susceptibility QTL 1) Rattus norvegicus

Symbol: Tls1
Name: T-lymphoma susceptibility QTL 1
RGD ID: 631527
Trait: thymus integrity trait   (VT:0010555)    
Measurement Type: post-insult time to onset of T-cell lymphoma   (CMO:0001907)    
LOD Score: 0.0
P Value: 0.001
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2590,450,144 - 135,450,144RGD_MAPPER_PIPELINE
Rnor_6.0593,273,130 - 138,273,130RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0597,315,057 - 142,315,057RGDRnor5.0
RGSC_v3.4594,515,803 - 139,515,803RGDRGSC3.4
RGSC_v3.1594,520,917 - 139,520,917RGD
Cross Type: backcross
Strains Crossed: F344/NRrrc LEXF/Stm 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Measurement Method

Vertebrate Trait

Rat Strain
F344/NRrrc  (IEA)
LEXF/Stm  (IEA)

References

References - curated
1. Lu LM, etal., Br J Cancer 1999 May;80(5-6):855-61.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2479Cyp4a2cytochrome P450, family 4, subfamily a, polypeptide 25134196910134207888Rat
2480Cyp4b1cytochrome P450, family 4, subfamily b, polypeptide 15134508728134526103Rat
2504Dio1iodothyronine deiodinase 15126894837126911532Rat
2078Ak4adenylate kinase 45120250318120309153Rat
3642Scp2sterol carrier protein 25127647934127735703Rat
61808Faahfatty acid amide hydrolase5134852899134872095Rat
3946Uroduroporphyrinogen decarboxylase5135855429135859515Rat
3602Rps6ribosomal protein S65105197821105200681Rat
2324Cdkn2bcyclin-dependent kinase inhibitor 2B5107834353107857428Rat
3453Ptprfprotein tyrosine phosphatase, receptor type, F5137036936137112930Rat
2865Ifnb1interferon beta 15106865192106865746Rat
620039Prdx1peroxiredoxin 15135536413135551986Rat
3001Leprleptin receptor5120503475120682281Rat
69056Jak1Janus kinase 15119982503120091452Rat
62039Plk3polo-like kinase 35135997725136002900Rat
3210Nrdcnardilysin convertase5128629949128694209Rat
620276Sh3gl2SH3 domain containing GRB2 like 2, endophilin A15103479767103654507Rat
620239Kif2ckinesin family member 2C5136027923136053268Rat
631439Psip1PC4 and SFRS1 interacting protein 15101555691101588659Rat
631442Cyp2j3cytochrome P450, family 2, subfamily j, polypeptide 35115196982115222084Rat
3316Pgm1phosphoglucomutase 15118743632118803055Rat
728909Pcsk9proprotein convertase subtilisin/kexin type 95126031368126053726Rat
68346Akr1a1aldo-keto reductase family 1 member A15135482068135498693Rat
621042Pik3r3phosphoinositide-3-kinase regulatory subunit 35135069972135145633Rat
621715Foxd3forkhead box D35118346283118349120Rat
3105Mpdzmultiple PDZ domain crumbs cell polarity complex component59941318499566356Rat
628846Cyp4a8cytochrome P450, family 4, subfamily a, polypeptide 85133978953134008255Rat
631435Orc1origin recognition complex, subunit 15128186651128212901Rat
620071Ipo13importin 135136728744136749187Rat
62015Nfibnuclear factor I/B5100436343100647962Rat
628770Dab1DAB adaptor protein 15123154360124279170Rat
621245Plaaphospholipase A2, activating protein5113548913113578928Rat
620922Rab3bRAB3B, member RAS oncogene family5128501789128568170Rat
61910Rps8ribosomal protein S85136020941136023511Rat
621642Tie1tyrosine kinase with immunoglobulin-like and EGF-like domains 15137294544137321116Rat
620940Mllt3MLLT3, super elongation complex subunit5106103498106202559Rat
620952Pdzk1ip1PDZK1 interacting protein 15133895849133900720Rat
631356Cyp4a3cytochrome P450, family 4, subfamily a, polypeptide 35134468666134484851Rat
620477Cdc20cell division cycle 205137260728137264931Rat
621727Foxe3forkhead box E35133724796133725656Rat
620980TekTEK receptor tyrosine kinase5113725717113852799Rat
621139Bsndbarttin CLCNK type accessory subunit beta5126071849126080647Rat
628657Spata6spermatogenesis associated 65131719922131803853Rat
619820Mrpl37mitochondrial ribosomal protein L375126656330126666830Rat
619804RragaRas-related GTP binding A5104941067104942662Rat
3170Nfianuclear factor I/A5116421895116750381Rat
621427Artnartemin5136759717136765036Rat
620454Plpp3phospholipid phosphatase 35124690214124765499Rat
621502Ssbp3single stranded DNA binding protein 35126511339126649830Rat
1305172Snapc3small nuclear RNA activating complex, polypeptide 35101526591101554015Rat
1305174Magohmago homolog, exon junction complex subunit5127480465127487617Rat
628650Slc24a2solute carrier family 24 member 25105336287105579959Rat
2325Cdkn2ccyclin-dependent kinase inhibitor 2C5129347731129352886Rat
620007Cyp2j4cytochrome P450, family 2, subfamily j, polypeptide 45119546458119564843Rat
1304814Klhl9kelch-like family member 95107323258107327442Rat
1304821Oma1OMA1 zinc metallopeptidase5122847624122900475Rat
628611Elavl2ELAV like RNA binding protein 25109499410109651829Rat
620893Prkaa2protein kinase AMP-activated catalytic subunit alpha 25124568845124642569Rat
1304972StilSTIL, centriolar assembly protein5133819302133851362Rat
2323Cdkn2acyclin-dependent kinase inhibitor 2A5107823323107832405Rat
2239C8bcomplement C8 beta chain5124298269124338055Rat
621034Leprotleptin receptor overlapping transcript5120498910120511011Rat
1303308Tspan1tetraspanin 15135019206135032412Rat
735206Yipf1Yip1 domain family, member 15126932730126968110Rat
3704Slc2a1solute carrier family 2 member 15138154677138182897Rat
620821Eif2b3eukaryotic translation initiation factor 2B subunit gamma5135882946135949276Rat
728889Plin2perilipin 25104984413105010863Rat
2398Cpt2carnitine palmitoyltransferase 25127505646127523016Rat
620045MutyhmutY DNA glycosylase5135663328135675348Rat
1304634Dph2diphthamide biosynthesis 25136723398136726358Rat
1304642Foxd2forkhead box D25133707194133710186Rat
1304573Mast2microtubule associated serine/threonine kinase 25135149336135285337Rat
619984Tesk2testis associated actin remodelling kinase 25135574172135659842Rat
68414St3gal3ST3 beta-galactoside alpha-2,3-sialyltransferase 35136765309136965642Rat
1306135Ifna1interferon, alpha 15106951822106952908Rat
1305550Eps15epidermal growth factor receptor pathway substrate 155128923809129022268Rat
1305552Med8mediator complex subunit 85137243094137243978Rat
2943JunJun proto-oncogene, AP-1 transcription factor subunit5114011184114014277Rat
1305442Tm2d1TM2 domain containing 15116992405117038882Rat
1306378Kdm4alysine demethylase 4A5136967650137014402Rat
1306334Ifna4interferon, alpha 45106922563106923132Rat
1306439Adamtsl1ADAMTS-like 15103789443104753866Rat
621243Slc6a9solute carrier family 6 member 95136669674136703702Rat
70987Faf1Fas associated factor 15129370767129738393Rat
1306748Tal1TAL bHLH transcription factor 1, erythroid differentiation factor5133864401133878604Rat
1306999Gpx7glutathione peroxidase 75128001766128009610Rat
1306400Ifna11interferon alpha family, gene 115107504741107505783Rat
1307066Tmem53transmembrane protein 535136112417136127976Rat
1305750Zdhhc21zinc finger DHHC-type palmitoyltransferase 215100924621100983412Rat
1307610Raver2ribonucleoprotein, PTB-binding 25119903449119982723Rat
1306529Dhcr2424-dehydrocholesterol reductase5126164708126188926Rat
1308525Echdc2enoyl CoA hydratase domain containing 25127770570127789568Rat
1304629Acer2alkaline ceramidase 25105230540105279732Rat
1306461Usp1ubiquitin specific peptidase 15117583502117594872Rat
1310014Hpdl4-hydroxyphenylpyruvate dioxygenase-like5135675826135677432Rat
1306981Frem1Fras1 related extracellular matrix 15101018009101166794Rat
1305345Pars2prolyl-tRNA synthetase 2, mitochondrial5126254090126259204Rat
1305347RGD1305347similar to RIKEN cDNA 2610528J115137356777137360636Rat
1305987Uqcrhubiquinol-cytochrome c reductase hinge protein5134919040134927235Rat
1306299Ippintracisternal A particle-promoted polypeptide5135351767135390363Rat
1305729Lrp8LDL receptor related protein 85127404348127476636Rat
1305417Atpaf1ATP synthase mitochondrial F1 complex assembly factor 15134641618134667079Rat
68945Cyp4a1cytochrome P450, family 4, subfamily a, polypeptide 15134492734134507158Rat
3280Pde4bphosphodiesterase 4B5121759236122136814Rat
1332845Olr856olfactory receptor 8565137725395137726333Rat
1308101Cntlncentlein5103251986103367088Rat
1333268Olr860olfactory receptor 8605137583661137584608Rat
1333490Olr872-psolfactory receptor pseudogene 8725137985849137986786Rat
1308030Glis1GLIS family zinc finger 15127043344127233395Rat
1309582Zyg11azyg-11 family member A, cell cycle regulator5127790162127828911Rat
1308303Atp6v0bATPase H+ transporting V0 subunit B5136718352136719868Rat
1333211Olr859olfactory receptor 8595137572031137575664Rat
1333931Olr855olfactory receptor 8555137496367137499514Rat
1311928Slc1a7solute carrier family 1 member 75127571114127616033Rat
1359481Tceanc2transcription elongation factor A N-terminal and central domain containing 25126746165126782726Rat
1309790Dock7dedicator of cytokinesis 75117595194117780844Rat
1308355C8acomplement C8 alpha chain5124348536124403117Rat
1311295Dmap1DNA methyltransferase 1-associated protein 15136533791136541795Rat
1334007Olr862olfactory receptor 8625137602530137603471Rat
1310856Zfyve9zinc finger FYVE-type containing 95128233096128392675Rat
1333113Olr868olfactory receptor 8685137900643137901590Rat
1310806Mmachcmetabolism of cobalamin associated C5135555587135561723Rat
1311508Osbpl9oxysterol binding protein-like 95128694407128839435Rat
1310339Hacd43-hydroxyacyl-CoA dehydratase 45106728401106758068Rat
1333331Olr865olfactory receptor 8655137812062137815850Rat
1311774Btf3l4basic transcription factor 3-like 45128432049128450530Rat
1333843Olr858olfactory receptor 8585137757938137758876Rat
1310770Cachd1cache domain containing 15119596726119832326Rat
1310787Lao1L-amino acid oxidase 15138011760138021653Rat
1311787Mysm1myb-like, SWIRM and MPN domains 15113902115113939083Rat
1310741Zswim5zinc finger, SWIM-type containing 55135735825135854525Rat
1309039Ptch2patched 25135962252135983816Rat
1559493Lexmlymphocyte expansion molecule5126196071126221916Rat
1333530Olr1778-psolfactory receptor pseudogene 17785121281962121282579Rat
1311027Dnai4dynein axonemal intermediate chain 45122551370122642161Rat
1309900Dnajc6DnaJ heat shock protein family (Hsp40) member C65120330372120492515Rat
1307821Mob3cMOB kinase activator 3C5134679850134687899Rat
1309796Dmrta1DMRT-like family A15108278217108284757Rat
1310694Bnc2basonuclin 25102407508102807389Rat
1308173Dmrta2DMRT-like family A25129754295129760045Rat
1305797Ttc39btetratricopeptide repeat domain 39B5101304982101405689Rat
1306799Usp24ubiquitin specific peptidase 245125896725126030411Rat
1311425Ifna2interferon alpha 25107416117107416695Rat
1309996Ermaperythroblast membrane associated protein (Scianna blood group)5138227168138240509Rat
1310095Zfp353zinc finger protein 3535108746039108748596Rat
1309094Toe1target of EGR1, exonuclease5135659733135663299Rat
1308489Dennd4cDENN domain containing 4C5105100081105195634Rat
1310600Rad54lRAD54 like5134948511134978125Rat
1307635Kank4KN motif and ankyrin repeat domains 45117376425117440643Rat
1305960Txndc12thioredoxin domain containing 125128450830128475858Rat
1309987Hook1hook microtubule-tethering protein 15114940053115000691Rat
1308150Zfp691zinc finger protein 6915138217841138222534Rat
1308529Ttc4tetratricopeptide repeat domain 45126264758126282431Rat
1310114Mtapmethylthioadenosine phosphorylase5107711077107777530Rat
1310116Cmpk1cytidine/uridine monophosphate kinase 15133759722133786452Rat
1308265Dmbx1diencephalon/mesencephalon homeobox 15134767436134792840Rat
1309823Hectd3HECT domain E3 ubiquitin protein ligase 35135860578135870535Rat
1305762Ebna1bp2EBNA1 binding protein 25137458692137463255Rat
1310313Tmem59transmembrane protein 595126783061126804177Rat
1306186RGD1306186similar to RIKEN cDNA 4930569K1359917290499179970Rat
1306630Cc2d1bcoiled-coil and C2 domain containing 1B5128215711128229762Rat
1307711Klf17Kruppel-like factor 175136602472136610058Rat
1309843Slc35d1solute carrier family 35 member D15122700396122746815Rat
1311383Slc5a9solute carrier family 5 member 95131836927131865218Rat
1307814Zyg11bzyg-11 family member B, cell cycle regulator5127844062127878792Rat
1308059Lurap1lleucine rich adaptor protein 1-like59846803998515126Rat
1308919Lrrc42leucine rich repeat containing 425126835170126856283Rat
1308616Szt2SZT2 subunit of KICSTOR complex5137192120137238384Rat
1308815Alg6ALG6, alpha-1,3-glucosyltransferase5118415680118470634Rat
1305274Coa7cytochrome c oxidase assembly factor 75127925726127936516Rat
1305358B4galt2beta-1,4-galactosyltransferase 25136707510136717345Rat
1310351Efcab14EF-hand calcium binding domain 145134594012134632168Rat
1310138Tut4terminal uridylyl transferase 45128063880128168726Rat
1310044Itgb3bpintegrin subunit beta 3 binding protein5118476410118541928Rat
1560884Ccdc171coiled-coil domain containing 1715101639355102017300Rat
1561395RGD1561395similar to 60S ribosomal protein L95120193094120193667Rat
1359704Ift74intraflagellar transport 745113579065113682485Rat
1563046Cer1cerberus 1, DAN family BMP antagonist5101003019101006375Rat
1563714Armh1armadillo-like helical domain containing 15136073056136112344Rat
1561242Cyp2j16cytochrome P450, family 2, subfamily j, polypeptide 165119454997119505533Rat
1565942Dynlt4dynein light chain Tctex-type 45135995128135997807Rat
1564021RGD1564021similar to high-mobility group box 159796444397964841Rat
1564486Ccdc163coiled-coil domain containing 1635135562034135568067Rat
1561416Hyihydroxypyruvate isomerase5137189440137192125Rat
1565225Ifna16l1interferon, alpha 16-like 15107446898107447636Rat
1311232Svbpsmall vasohibin binding protein5138245639138251353Rat
1560027Elavl4ELAV like RNA binding protein 45130001387130144557Rat
1563227Zfp352zinc finger protein 3525110325096110326940Rat
1334318Olr867olfactory receptor 8675137873745137875662Rat
1563467Cdcp2CUB domain containing protein 25126697728126716150Rat
1560983RGD1560983RGD15609835110735799110737001Rat
1561150RGD1561150similar to CPN10-like protein5110978336110978644Rat
1561569Tmem69transmembrane protein 695135394013135397591Rat
1560251Caap1caspase activity and apoptosis inhibitor 15113479416113532961Rat
1562337Mier1MIER1 transcriptional regulator5122642065122693642Rat
1564097RGD1564097similar to ribosomal protein L195112458451112459079Rat
1563215Cyp2j10cytochrome P450, family 2, subfamily j, polypeptide 105115067847115101961Rat
1359286LOC367515similar to RIKEN cDNA 1700081O2259871736798812159Rat
1359312Ifna5interferon, alpha 55107039347107039925Rat
1334256Olr871-psolfactory receptor pseudogene 8715137957338137958278Rat
1559469Ror1receptor tyrosine kinase-like orphan receptor 15118892874119239528Rat
1311932Dynlt5dynein light chain Tctex-type family member 55122498892122522110Rat
1311937Tmem125transmembrane protein 1255137371825137373229Rat
1560146RGD1560146similar to hypothetical protein MGC348375115320125115388963Rat
1560921Dmrtb1DMRT-like family B with proline-rich C-terminal, 15127266824127273656Rat
1359609Naspnuclear autoantigenic sperm protein5135446485135472113Rat
1559603Mknk1MAPK interacting serine/threonine kinase 15134691852134730887Rat
1311069MplMPL proto-oncogene, thrombopoietin receptor5137268412137282032Rat
1561090Ptprdprotein tyrosine phosphatase, receptor type, D59286222993514071Rat
1559652Nsun4NOP2/Sun RNA methyltransferase 45134885377134905492Rat
1563015Tmem269transmembrane protein 2695138254946138272589Rat
1559786CzibCXXC motif containing zinc binding protein5127489349127498734Rat
1311126Ttc39atetratricopeptide repeat domain 39A5129024505129083226Rat
1311129Prpf38apre-mRNA processing factor 38A5128174835128186532Rat
1332921Olr866olfactory receptor 8665137845489137846436Rat
1311221Lrrc41leucine rich repeat containing 415134927609134948530Rat
628719Cyp4x1cytochrome P450, family 4, subfamily x, polypeptide 15133929532133959447Rat
1332893Olr869olfactory receptor 8695137927160137928107Rat
1359429FggyFGGY carbohydrate kinase domain containing5114516860114901571Rat
1564897RGD1564897similar to Interferon alpha-1 precursor5107460197107460813Rat
1560173Ndc1NDC1 transmembrane nucleoporin5126976636127022941Rat
1359562Gpbp1l1GC-rich promoter binding protein 1-like 15135398926135439772Rat
1334300Olr870-psolfactory receptor pseudogene 8705137942482137943423Rat
1311849Focadfocadhesin5106409411106729308Rat
1561518Ttc22tetratricopeptide repeat domain 225126217036126243178Rat
1333749Olr857olfactory receptor 8575137738298137739246Rat
1560729RGD1560729similar to ribosomal protein S245108607099108607560Rat
1563440Mroh7maestro heat-like repeat family member 75126283868126329157Rat
1565362PatjPATJ, crumbs cell polarity complex component5117038548117340308Rat
1586386Trabd2bTraB domain containing 2B5133220986133437151Rat
1587378Pramef5PRAME family member 559899819699000744Rat
1586416LOC688684similar to 60S ribosomal protein L325125345330125346048Rat
1587504Skint10selection and upkeep of intraepithelial T cells 105133048273133067278Rat
1583724LOC500492similar to Interferon alpha-1 precursor5107338521107340094Rat
1359396Pomgnt1protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)5135007343135017220Rat
1584753Olfr1330-ps1olfactory receptor 1330, pseudogene 15137616305137617311Rat
1584102Tmem61transmembrane protein 615126086873126096130Rat
1564040RGD1564040similar to methylenetetrahydrofolate dehydrogenase (NAD) (EC 1.5.1.15)/methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) precursor5120869141120870270Rat
1583723LOC500494similar to Glycylpeptide N-tetradecanoyltransferase 1 (Peptide N-myristoyltransferase 1) (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1) (Type I N-myristoyltransferase)5107144671107148093Rat
1582959LOC688948similar to ribosomal protein S265135628379135628765Rat
1564505Angptl3angiopoietin-like 35117698590117706729Rat
1586398LOC689902hypothetical protein LOC68990259830894998309537Rat
1585030LOC691387similar to HBxAg transactivated protein 259865933898668619Rat
1583722LOC500497similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)5108757056108807017Rat
1587526LOC689854similar to H/ACA ribonucleoprotein complex subunit 4 (Dyskerin) (Nucleolar protein family A member 4) (snoRNP protein DKC1) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57)59738352697390201Rat
1587555LOC689825similar to zinc finger protein 5335132554425132555614Rat
1587570Rps4x-ps3ribosomal protein S4, X-linked, pseudogene 35131972536131973761Rat
1587579Skint1selection and upkeep of intraepithelial T cells 15131915266131944842Rat
1566327Skint4selection and upkeep of intraepithelial T cells 45132005656132043655Rat
1565822RGD1565822similar to Bcl-w5131563279131563845Rat
1563375RGD1563375similar to small nuclear ribonucleoparticle-associated protein59671089196711581Rat
1562911Ccdc24coiled-coil domain containing 245136691655136707197Rat
1563332Eqtnequatorin5113852191113881142Rat
1565480Ube2uubiquitin conjugating enzyme E2 U5118574647118642810Rat
1561827RGD1561827similar to Interferon alpha-1 precursor5107048346107049081Rat
1584958Bend5BEN domain containing 55131257127131312335Rat
1565065Ifneinterferon, epsilon5107178124107203908Rat
1583986LOC690187similar to TGF beta-inducible nuclear protein 1 (CDK105 protein)5101510594101511489Rat
1584354LOC686209similar to olfactory receptor 13405137775801137776754Rat
1583529Cks1lCDC28 protein kinase regulatory subunit 1-like5110831843110832242Rat
1559679RGD1559679similar to Interferon alpha-1 precursor5107355189107356089Rat
1562532RGD1562532hypothetical gene supported by BC0790575122766889122828398Rat
1562603RGD1562603hypothetical gene supported by NM_0316055134110784134123734Rat
1566001Lurap1leucine rich adaptor protein 15134991997135001720Rat
1565870Oog3oogenesin 359904071599043685Rat
1584915LOC366449hypothetical LOC3664495134910128134911103Rat
1584916LOC366447similar to farnesyl diphosphate synthetase5134542203134543849Rat
1584917LOC366444similar to Pyruvate kinase isozyme M25134178742134180127Rat
1584918LOC366442similar to Elongation FacTor family member (eft-4)5133102650133104239Rat
1561246RGD1561246similar to put. precursor MuIFN-alpha 55106996094106996722Rat
1584919LOC366436similar to Beta-enolase (2-phospho-D-glycerate hydro-lyase) (Muscle-specific enolase) (MSE) (Skeletal muscle enolase) (Enolase 3)5129205651129206966Rat
1584920LOC366425similar to glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)-like5123464496123465468Rat
1584921LOC366424similar to NADH dehydrogenase (ubiquinone) Fe-S protein 25123094865123098556Rat
1584923LOC366414similar to 40S ribosomal protein S7 (S8)5109440686109441303Rat
1584925LOC366410similar to RIKEN cDNA 4933403M225108474323108475393Rat
1584926LOC366408similar to UPF0279 protein C14orf129 homolog5107780650107781070Rat
1564637RGD1564637similar to interferon alpha 8/6 precursor; IFNa8/6 (B6)5107428899107429634Rat
1565987RGD1565987similar to F-box and leucine-rich repeat protein 1859856972398571614Rat
1564957Sgip1SH3GL interacting endocytic adaptor 15122300415122498478Rat
1585948Cfap57cilia and flagella associated protein 575137652118137670067Rat
1585948Cfap57cilia and flagella associated protein 575137383065137458594Rat
1591391LOC685622similar to non-SMC element 1 homolog5118300138118301153Rat
1592786LOC682958similar to keratin complex 1, acidic, gene 185123652141123654002Rat
1591357Kti12KTI12 chromatin associated homolog5128464035128465557Rat
1586071LOC366396similar to ribosomal protein S125101429212101429614Rat
1586073LOC366391hypothetical LOC36639159607975996081440Rat
1587085LOC679598hypothetical protein LOC6795985137351550137352188Rat
1587151Elovl1ELOVL fatty acid elongase 15137255868137260486Rat
1591090Calr4calreticulin 45128865339128900135Rat
1592089LOC298257similar to TBC1 domain family, member 55115541490115549909Rat
1592090LOC298245similar to Nhp2 non-histone chromosome protein 2-like 15111905187111905577Rat
1592091LOC298243similar to 60S ribosomal protein L55111058807111059674Rat
1591038LOC689589hypothetical protein LOC6895895129154544129175596Rat
1585925LOC679664similar to Peptidyl-prolyl cis-trans isomerase A (PPIase) (Rotamase) (Cyclophilin A) (Cyclosporin A-binding protein) (P31) (p1B15)5103402789103403462Rat
1585134Tex38testis expressed 385134635913134641376Rat
1585888LOC680901hypothetical protein LOC6809015108982919108989666Rat
1587479LOC691101similar to Kruppel-like factor 4 (gut)59901676599018688Rat
1587100LOC679583similar to UPF0197 protein C11orf10 homolog5137350471137350873Rat
1587828LOC685946similar to PRAME family member DJ1198H6.25120831021120833778Rat
1359194Fam151afamily with sequence similarity 151, member A5126334847126347598Rat
1589875LOC690903similar to Interferon alpha-1 precursor5106959525106960310Rat
1584843LOC502977similar to cytoplasmic beta-actin5125373711125374253Rat
1583684LOC679803similar to olfactory receptor Olr8695137635013137636002Rat
1583685Saxo1stabilizer of axonemal microtubules 15104771081104921001Rat
1561825Efcab7EF-hand calcium binding domain 75118673835118724581Rat
1587537LOC689843similar to Aldose reductase-related protein 2 (AR) (Aldehyde reductase) (Fibroblast growth factor regulated protein) (FR-1 protein)59734937897353932Rat
1584061Kncnkinocilin5134736603134744739Rat
1564074Fyb2FYN binding protein 25124442386124561766Rat
1586680LOC686016similar to PRAME family member 65120847706120848930Rat
1588220Hspd1-ps14heat shock protein 1, pseudogene 145107966604107968753Rat
1597398Ldlrad1low density lipoprotein receptor class A domain containing 15126812168126821437Rat
1596413Hspb11heat shock protein family B (small), member 115126856128126882913Rat
1597451Cyb5rlcytochrome b5 reductase-like5126666934126683069Rat
1595093L1td1LINE-1 type transposase domain containing 15117347998117361012Rat
1598323Atg4cautophagy related 4C, cysteine peptidase5117861517117932116Rat
1596200Best4bestrophin 45136013978136017742Rat
1593542Shisal2ashisa like 2A5127967880127983690Rat
1591722Lrrc19leucine rich repeat containing 195113614164113626834Rat
1593266Tyrp1tyrosinase-related protein 159838729198406083Rat
1596047LOC690462hypothetical protein LOC6904625136356924136357528Rat
1596966Lad1-ps1ladinin 1, pseudogene 15101996776101999167Rat
1591050Rnf11ring finger protein 115129296271129298513Rat
1594706LOC690554similar to HesB protein5134426154134426708Rat
1588616LOC691090similar to PRAME family member DJ1198H6.259900928299012045Rat
1591738LOC680462similar to ribosomal protein S245107316994107317458Rat
1593804LOC685453hypothetical protein LOC6854535117946326117958025Rat
1588696Skint8selection and upkeep of intraepithelial T cells 85131867780131902258Rat
1588697LOC689791hypothetical protein LOC68979159544714695450261Rat
1598117LOC679953similar to MRS2-like, magnesium homeostasis factor5137934502137935973Rat
1595859Eri3ERI1 exoribonuclease family member 35136406009136533408Rat
1597473LOC689013similar to Protein FAM57B5126501519126502194Rat
1598210Rnf220ring finger protein 2205136129457136351752Rat
1598211Ccdc17coiled-coil domain containing 175135440276135445794Rat
1597743LOC685139similar to BWK-15115539079115540575Rat
2320392LOC100364773hypothetical LOC10036477359629478796301480Rat
2319137LOC100361943SNRPN upstream reading frame protein-like59671050296710817Rat
2318140LOC100362448hypothetical LOC1003624485118226106118226468Rat
2318761LOC100362122selection and upkeep of intraepithelial T cells 3-like5132125151132218192Rat
2318892LOC100362090ribosomal protein L36-like5137895900137896277Rat
2318341LOC100362345hypothetical protein LOC1003623455107608029107608906Rat
2318487LOC100362298ribosomal protein S18-like5117509318117509872Rat
2320529Btbd19BTB domain containing 195135988549135994985Rat
2320713LOC100361148ribosomal protein S20-like5135687404135687938Rat
2321596Rnf11l1ring finger protein 11-like 15129091930129113132Rat
2323226LOC100363317signal peptidase complex subunit 2 homolog5110743404110744369Rat
2323430LOC100363210component of oligomeric golgi complex 559363591093637964Rat
2324385LOC100366073hypothetical LOC1003660735117789296117791349Rat
2324467Izumo3IZUMO family member 35110703837110706655Rat
2325348Mir101amicroRNA 101a5120168437120168511Rat
2325363Mir872microRNA 8725113657727113657807Rat
2325391Mir31microRNA 315107206515107206620Rat
2325411Mir761microRNA 7615128651867128651942Rat
4888605Mir3554microRNA 35545107206509107206626Rat
2324587LOC100363867LRRGT00106-like5126691100126691525Rat
2324757LOC100363133heat shock cognate 71 kDa protein-like59903099899033110Rat
2324815Acot11acyl-CoA thioesterase 115126347478126395655Rat
6487214LOC100912356interferon alpha-1-like5107387566107388182Rat
6487330LOC100912375probable rRNA-processing protein EBP2-like5137458672137463255Rat
6487699LOC100912314interferon alpha-1-like5107369378107370443Rat
6489434LOC100912024uncharacterized LOC1009120245116972453116973674Rat
6486125LOC100912642cytochrome P450 2J3-like5115021650115066897Rat
6491750P3r3urfPIK3R3 upstream open reading frame5135029480135046282Rat
6491947Faahlfatty-acid amide hydrolase-like5134330204134349400Rat
6486656LOC100912490ubiquitin carboxyl-terminal hydrolase 15-like5117557354117558150Rat
6494360LOC100911221uncharacterized LOC1009112215114014532114066203Rat
6490490LOC100911818selection and upkeep of intraepithelial T-cells protein 10-like5132895974132956366Rat
6490949LOC100911772selection and upkeep of intraepithelial T-cells protein 5-like5132577383132636782Rat
6493177Agbl4AGBL carboxypeptidase 45130742297131656581Rat
6486433LOC100912529olfactory receptor 2B6-like5137564607137565560Rat
6490232LOC100911891cytochrome P450 2J5-like5115227854115235345Rat
6499312LOC100910316tetratricopeptide repeat protein 39A-like5129042519129082462Rat
6502836LOC100909643interferon alpha-1-like5107382726107383824Rat
6496493LOC100910768ubiquitin-40S ribosomal protein S27a-like5138042662138043110Rat
6500146LOC100910116transcription factor BTF3-like5127805888127806504Rat
6500251LOC100910132PRAME family member 12-like5120739248120741971Rat
6503412LOC100909522uncharacterized LOC1009095225107288643107289531Rat
6497677LOC100910606olfactory receptor 2A5-like5137707416137710564Rat
6497739LOC100910621uncharacterized LOC1009106215128346914128393145Rat
6500925LOC100909916trafficking protein particle complex subunit 2-like protein-like59868356698684120Rat
6497980LOC100910558uncharacterized LOC1009105585100650512100688185Rat
6498231LOC10091046160 kDa heat shock protein, mitochondrial-like5109936990109941648Rat
6498356LOC100910489kinectin-like5110610695110684400Rat
6498548LOC100910407Y-linked testis-specific protein 1-like5121182305121183008Rat
7497822LOC102547167uncharacterized LOC1025471675125873136125894257Rat
7514994LOC102556219uncharacterized LOC1025562195117961456117974351Rat
7526286LOC102551651uncharacterized LOC1025516515100296225100306252Rat
7506262LOC102551042uncharacterized LOC1025510425127117472127126617Rat
7530181LOC102553616prohibitin-like5101434950101435673Rat
7509921LOC102556039uncharacterized LOC10255603959839070498420907Rat
7502785LOC102553524uncharacterized LOC1025535245116206103116222950Rat
7646050LOC102549274uncharacterized LOC1025492745106069933106076451Rat
7648089LOC102550175uncharacterized LOC1025501755125556759125562653Rat
7649148LOC102551075uncharacterized LOC1025510755133644644133654906Rat
7664735LOC102548308uncharacterized LOC1025483085122412771122453893Rat
7665460LOC102549232uncharacterized LOC1025492325118844790118858636Rat
7649714LOC102550980uncharacterized LOC1025509805135702036135708778Rat
7651149LOC102547169protein FAM156A/FAM156B-like5131575900131576510Rat
7558064LOC102555405uncharacterized LOC10255540559602971596049624Rat
7652555LOC102551172uncharacterized LOC1025511725127084151127088392Rat
7559302LOC102553423uncharacterized LOC1025534235137100591137109028Rat
7559665LOC102552337PRAME family member 22-like5121452869121454003Rat
7623537LOC102547558uncharacterized LOC1025475585105031761105033047Rat
7653686LOC102550714uncharacterized LOC1025507145135679532135685912Rat
7654450LOC102547236uncharacterized LOC1025472365124433238124441331Rat
7625382LOC10254737560S ribosomal protein L17-like5119840860119841439Rat
7638959LOC10255530740S ribosomal protein S12-like5135876933135877355Rat
7625538LOC102554074uncharacterized LOC1025540745137281000137294470Rat
7641114LOC102556040noelin-like5117758416117759920Rat
7658054LOC102553166uncharacterized LOC1025531665116443978116446858Rat
7660377LOC102547623uncharacterized LOC1025476235105054646105055402Rat
7645046LOC102556374uncharacterized LOC1025563745118344644118346274Rat
7608335LOC102547589uncharacterized LOC1025475895120379229120385699Rat
7569278LOC102551375uncharacterized LOC1025513755133799162133803319Rat
7592700LOC102554351uncharacterized LOC1025543515109897374109910920Rat
7593337LOC102550339uncharacterized LOC1025503395114224949114231394Rat
7543605LOC102546952uncharacterized LOC1025469525112395189112481708Rat
7556402LOC102548249uncharacterized LOC1025482495122166862122181558Rat
7573615LOC102555548glyceraldehyde-3-phosphate dehydrogenase-like5111853327111855231Rat
7545693Podnpodocan5127617482127637898Rat
7546204LOC102548397ankyrin repeat domain-containing protein 13C-like5132660527132663779Rat
7561791LOC102548251uncharacterized LOC1025482515129748322129754217Rat
7579364LOC102550979uncharacterized LOC1025509795133480487133498499Rat
7580703LOC102549934uncharacterized LOC1025499345107290141107295017Rat
7548488LOC102551560uncharacterized LOC1025515605127296238127297979Rat
7581821LOC102547166uncharacterized LOC1025471665124214362124220931Rat
7582353LOC10255457460S ribosomal protein L9-like5128050738128051591Rat
7551042LOC102546747uncharacterized LOC1025467475112340596112355251Rat
7604289LOC102549668uncharacterized LOC1025496685124769510124776151Rat
7583391LOC10255443560S ribosomal protein L17-like5110213472110214221Rat
7552575LOC102553327histone H3.3C-like5134193924134195377Rat
7585186LOC102552694zinc finger CCCH-type antiviral protein 1-like5127534809127540028Rat
7691700LOC102553953uncharacterized LOC1025539535134414151134424460Rat
7694123LOC102551858uncharacterized LOC1025518585100751376100753293Rat
7704849LOC102551440uncharacterized LOC1025514405114719920114725623Rat
7705627LOC102554130uncharacterized LOC1025541305134437704134460438Rat
7706051LOC102550978uncharacterized LOC1025509785126846750126849843Rat
7686499LOC102552850ferritin light chain 1-like5115224485115225516Rat
7687331LOC102550174uncharacterized LOC1025501745114035704114066203Rat
7731710LOC102552336cyclin-dependent kinase inhibitor 2A, isoform 2-like5107834353107841298Rat
7738149LOC10255467240S ribosomal protein S27-like5128079031128079561Rat
7715317LOC102549336uncharacterized LOC1025493365106632734106634661Rat
7716503LOC102546830protein FAM104A-like5131583888131593613Rat
7667036LOC102549606heterogeneous nuclear ribonucleoprotein A3-like5132151049132151732Rat
7667674LOC102549365uncharacterized LOC1025493655126120535126132987Rat
7696407LOC102556248glyceraldehyde-3-phosphate dehydrogenase-like5129429164129430340Rat
7697001LOC102554261high mobility group protein B1-like5109768833109770244Rat
7697358LOC102552523uncharacterized LOC1025525235107944093107966158Rat
7743271LOC102552278uncharacterized LOC1025522785101212979101215752Rat
7699232LOC102549026protein DEK-like5132896627132906123Rat
7670779LOC102552173protein DBF4 homolog A-like5101117934101121067Rat
7720569LOC102553756sperm head and tail associated protein-like5134377546134382593Rat
7720911LOC102549337metallothionein-2-like5124494158124495292Rat
7671911LOC10255537360S ribosomal protein L7-like5111265406111269304Rat
7746436LOC102555669uncharacterized LOC10255566959624246596260090Rat
7721375LOC102554829uncharacterized LOC10255482959547254195478178Rat
7746807LOC10255111160S ribosomal protein L18-like5135812653135814829Rat
7747039LOC102553361uncharacterized LOC1025533615136822886136835096Rat
7747960Insl5insulin like 55122536792122540410Rat
7703644LOC102554881uncharacterized LOC10255488159530059095437042Rat
7729761LOC102551652uncharacterized LOC1025516525115101847115125660Rat
9088337LOC103692439transcription elongation factor B polypeptide 1 pseudogene5129003519129005864Rat
9132746LOC103692443cytosolic carboxypeptidase 6-like5131655402131660995Rat
9135517LOC103692391uncharacterized LOC1036923915100464573100467350Rat
9213294LOC103692423uncharacterized LOC1036924235117457405117476277Rat
9097677LOC103692449uncharacterized protein-like5123904721123905410Rat
9177823LOC103692432uncharacterized LOC1036924325125369293125373517Rat
9140322LOC103692401uncharacterized LOC1036924015103496602103505667Rat
9101491LOC103692394uncharacterized LOC1036923945100869640100887927Rat
9144788LOC103692410uncharacterized LOC10369241059909108599095436Rat
9080733LOC103692474basic proline-rich protein-like5135732670135737038Rat
9186911LOC103690754zinc finger protein 606-like5134442047134444833Rat
9108934LOC103692402uncharacterized LOC1036924025104344766104373550Rat
9109493LOC10369244560S acidic ribosomal protein P1 pseudogene5116183240116183579Rat
9112029LOC10369243660S ribosomal protein L28-like5126680986126689770Rat
9112719LOC103692395uncharacterized LOC1036923955100869640100903163Rat
9161289LOC103692433uncharacterized LOC1036924335125574105125587857Rat
9165334LOC103692435uncharacterized LOC1036924355126609593126613573Rat
9120358LOC103692409non-histone chromosomal protein HMG-17-like59712096097127752Rat
9169458LOC103692400phosphoglycerate mutase 1 pseudogene5103511115103530055Rat
9171422LOC103692447chromatin assembly factor 1 subunit A-like5120755516120756692Rat
9071259LOC103692399uncharacterized LOC1036923995102985576102987223Rat
9124058LOC103692387uncharacterized LOC10369238759430708794417466Rat
9126678LOC103692457uncharacterized LOC1036924575135399050135411874Rat
9214042LOC103692442cytochrome P450 4A12-like5131300670131302838Rat
9307232LOC103692430uncharacterized LOC1036924305124155016124166090Rat
9271724LOC103692437spidroin-1-like5127631365127638598Rat
9354805LOC103692446chromatin assembly factor 1 subunit A-like5120719647120720578Rat
9354806LOC103692460uncharacterized LOC1036924605137265071137266240Rat
9273030LOC10369242060S acidic ribosomal protein P1 pseudogene5116182906116183233Rat
9358596LOC103692450protein crumbs homolog 1 pseudogene5131155220131161472Rat
9231526LOC103692398uncharacterized LOC1036923985101827485101849580Rat
9232304LOC103692419uncharacterized LOC1036924195114734825114787958Rat
9232714LOC103692390uncharacterized LOC1036923905100540618100542200Rat
9278649LOC103692475UPF0585 protein C16orf13 homolog pseudogene5137129357137129904Rat
9320162LOC103692421uncharacterized LOC1036924215116531126116532351Rat
9384816LOC103692451adapter protein CIKS pseudogene5133090186133094909Rat
9323188LOC103692396proteoglycan 4-like5101262599101264436Rat
9238979LOC103692452uncharacterized LOC1036924525133234692133240025Rat
9284656LOC103692415uncharacterized LOC1036924155112846150112856223Rat
9289467LOC103692416uncharacterized LOC1036924165113190650113202940Rat
9359318LOC10369526760S ribosomal protein L7a pseudogene5111051670111054021Rat
9360902LOC103692434uncharacterized LOC1036924345126222108126223759Rat
9251690LOC103692404uncharacterized LOC1036924045106353599106356064Rat
9252962LOC103692403uncharacterized LOC1036924035106328172106332047Rat
9253243LOC103692386uncharacterized LOC10369238659336659393368886Rat
9254034LOC103692429uncharacterized LOC1036924295123684521123697887Rat
9382807LOC103692458E3 ubiquitin-protein ligase Rnf220 pseudogene5136342187136353052Rat
9264036LOC103692427uncharacterized LOC1036924275122049707122099026Rat
9346462LOC103692424uncharacterized LOC1036924245117873612117877134Rat
9347214LOC103692426uncharacterized LOC1036924265119910189119911203Rat
9365467LOC103692454uncharacterized LOC1036924545134658778134663829Rat
9331280LOC103695269uncharacterized LOC1036952695124970147125035520Rat
9390410LOC103692428small EDRK-rich factor 2 pseudogene5122527964122528220Rat
9394844LOC103692431uncharacterized LOC1036924315124790401124800540Rat
9397374LOC103692422uncharacterized LOC1036924225116529135116532427Rat
9398755LOC103692441uncharacterized LOC1036924415131165568131173370Rat
9404082LOC103692411uncharacterized LOC1036924115108273180108277787Rat
9405043LOC103692388uncharacterized LOC10369238859545140995465657Rat
9405541LOC103692385receptor-type tyrosine-protein phosphatase delta-like59315871793346814Rat
9408812LOC103692393uncharacterized LOC1036923935100851101100855998Rat
9409380LOC103692392uncharacterized LOC1036923925100439828100446005Rat
9409909LOC103692444uncharacterized LOC1036924445115563197115587649Rat
9417869LOC103692418uncharacterized LOC1036924185114734825114828061Rat
11455597LOC108351111uncharacterized LOC10835111159336659293404254Rat
11433856LOC108350999uncharacterized LOC1083509995107969449107989209Rat
11454350LOC108351134uncharacterized LOC1083511345106361144106362318Rat
11463393LOC108351069methyltransferase-like protein 16 pseudogene5107730558107733390Rat
11471739LOC108351133glyceraldehyde-3-phosphate dehydrogenase pseudogene5105710203105711015Rat
11472958LOC108351014uncharacterized LOC1083510145131674243131679416Rat
11473324LOC10835110240S ribosomal protein S20 pseudogene5105296872105301607Rat
11474955LOC108350993uncharacterized LOC1083509935102207403102216030Rat
11475977Trnah-gug10transfer RNA histidine (anticodon GUG) 105100772924100772995Rat
11457244Trnap-agg7transfer RNA proline (anticodon AGG) 75135063657135063725Rat
11457733LOC108351019uncharacterized LOC1083510195134214622134222087Rat
11362414LOC108351010uncharacterized LOC1083510105126457857126470587Rat
11458786LOC108350991uncharacterized LOC10835099159932000499348150Rat
11459931LOC108350995uncharacterized LOC1083509955105959268105968271Rat
11369796LOC108351137glyceraldehyde-3-phosphate dehydrogenase5115649077115650141Rat
11363166LOC108351015uncharacterized LOC1083510155131681182131687750Rat
11451090LOC108351140NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene5138133278138133670Rat
11383635LOC108351136uncharacterized LOC1083511365113984225113985625Rat
11405418LOC10835113240S ribosomal protein S29-like5101462215101462385Rat
11413299LOC108350998uncharacterized LOC1083509985107612541107620590Rat
11413524LOC108351007uncharacterized LOC1083510075122040393122049652Rat
11413852LOC108351005uncharacterized LOC1083510055116773530116780831Rat
11416818LOC108351001uncharacterized LOC1083510015110706779110725926Rat
11417000LOC108351013uncharacterized LOC1083510135129340749129342489Rat
11418076LOC108351000uncharacterized LOC1083510005110751187110772073Rat
11418089LOC108351004uncharacterized LOC1083510045113970613113983165Rat
11421297LOC108351104PRAME family member 12-like5120687409120690701Rat
11421299LOC108351138uncharacterized LOC1083511385118099390118101877Rat
11422918LOC108351100PRAME family member 12-like59906906799072303Rat
11423781LOC108351112uncharacterized LOC1083511125116688733116699793Rat
11425965LOC108351099PRAME family member 12-like59896593698973405Rat
11426018LOC108351002uncharacterized LOC1083510025112113645112120779Rat
11385824LOC108350994uncharacterized LOC1083509945105926938105944001Rat
11398866LOC108351105uncharacterized LOC1083511055133709711133713298Rat
11410745LOC108351012uncharacterized LOC1083510125128875440128901117Rat
11400792LOC108351006uncharacterized LOC1083510065119628613119629260Rat
11380122LOC108351070small ubiquitin-related modifier 2 pseudogene5124498078124504559Rat
11402885LOC108351018uncharacterized LOC1083510185132308469132322217Rat
11380980LOC108351016selection and upkeep of intraepithelial T-cells protein 6-like5132690221132797501Rat
11392135LOC10835099760S ribosomal protein L27a-like5107331938107333839Rat
11381498LOC108351103ferritin light chain 1 pseudogene5115224820115225315Rat
11404764LOC108351110conserved oligomeric Golgi complex subunit 5 pseudogene59363079593638947Rat
11519139LOC108350990zinc finger CCHC domain-containing protein 9-like59544752895450440Rat
11503669LOC108351009uncharacterized LOC1083510095125794478125819133Rat
11503680LOC108351139uncharacterized LOC1083511395136543521136551978Rat
11479750LOC108351020uncharacterized LOC1083510205137681696137685602Rat
11510233LOC108351003uncharacterized LOC1083510035113555202113558173Rat
11511560LOC108351008uncharacterized LOC1083510085125197590125223561Rat
11512073LOC108351021uncharacterized LOC1083510215138145329138154607Rat
11499899LOC10835110140S ribosomal protein S17 pseudogene5101499361101503395Rat
11490720LOC108348243interferon alpha-1-like5107267418107267948Rat
11492083LOC108350992uncharacterized LOC1083509925101515676101526492Rat
11493007LOC108351131glyceraldehyde-3-phosphate dehydrogenase pseudogene59961424699614998Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10262D5Rhm31335124330147124330281Ratregion
10263D5Rhm41455124357602124357746Ratregion
10321D5Lev171235107832238107832360Ratregion
10324D5Lev191835129348225129348407Ratregion
10453D5Mcw15134469641134469771Ratregion
10453D5Mcw15134197895134198019Ratregion
10454D5Wox121185134469651134469772Ratregion
10454D5Wox121185134197905134198020Ratregion
10826D5Mgh231225114014818114014945Ratregion
10827D5Lev152925114011820114012111Ratregion
11090D5Rhm21695118807885118808053Ratregion
33804D5Mit62165122581410122581621Ratregion
33981D5Mit426659327313093273395Ratregion
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5502701C1orf1651175131305125131305241Ratregion
5503196mActb05125373366125373771Ratregion
5503256UniSTS:23755610885136036529136037616Ratregion
5503958UniSTS:2569462675114012894114013160Ratregion
5503954Klf455259901724399017794Ratregion
5504068px-5c81565130371078130371233Ratregion
5507643Dio15835126911650126912232Ratregion
5503680ELAVL2__75779485109501089109502600Ratregion
5503845Nmt12795107148121107148401Ratregion
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5505652UniSTS:488446118459857137898571836Ratregion
5505686UniSTS:4893139545137775801137776754Ratregion
5505686UniSTS:4893139545137564607137565560Ratregion
5505921UniSTS:496549945137261455137262459Ratregion
5506177UniSTS:498727675137307117137307183Ratregion
5506246UniSTS:50244205122736992122737617Ratregion
5506234Ndufs21215123094710123094830Ratregion
5506715SCP2965127723816127723911Ratregion
5506873G470712225103646221103646442Ratregion
5507013fj50d02.y12385137040436137040773Ratregion
5507059UniSTS:2242831045136718425136718528Ratregion
5507117UniSTS:2246031595102683111102683269Ratregion
5507169UniSTS:2249081775137038111137038287Ratregion
5499675MARC_7377-7378:992008389:13855135012219135012603Ratregion
5499851UniSTS:2349962235128229432128229654Ratregion
5499589At-8BJ-00805104598267104599484Ratregion
5501398Mpdz059952064199521794Ratregion
5500262D1S2299E875130002701130002787Ratregion
5499843UniSTS:2349692875117311488117311774Ratregion
5499845UniSTS:2349673385117360538117360875Ratregion
5500515RH135495975117698995117699091Ratregion
5500368GDB:3526881095124312871124312979Ratregion
5500599RH1361501995135447589135448558Ratregion
5501179PMC152255P11485107832245107832392Ratregion
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5501127PMC141153P12705129360167129360436Ratregion
5501127PMC141153P12705129351710129351979Ratregion
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5504926Nfib525100637407100637458Ratregion
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5505275Elavl24705109501497109502530Ratregion
5501816MARC_13905-13906:1007570719:16495135861859135862507Ratregion
5505812UniSTS:49540514285136988593136990020Ratregion
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5501940MARC_17865-17866:1025013775:14875100439226100439712Ratregion
5502172MARC_7381-7382:996687840:1985134857247134858489Ratregion
5502172MARC_7381-7382:996687840:1985134334552134335794Ratregion
5502174MARC_7369-7370:996687826:16505136711134136711783Ratregion
5501980MARC_21798-21799:1025034200:11015135656727135657042Ratregion
5501998MARC_23422-23423:1025023955:36175135976757135977373Ratregion
5502224G64294150359554041995541921Ratregion
5502311RH1243872305105207386105207615Ratregion
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5502321RH12445215059738398697384135Ratregion
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6480632D5Uwm741855133112785133112941Ratregion
6480634D5Uwm755805129658979129659475Ratregion
11528623rs1056922315131897286131897286Ratregion
11528621rs1986519875130254591130254591Ratregion
11528622rs1974342915129335618129335618Ratregion
Position Markers

Flank 1: (D5Mit4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2590,450,144 - 90,450,412 (+)MAPPER
Rnor_6.0593,273,130 - 93,273,395NCBI
Rnor_5.0597,315,057 - 97,315,322UniSTS
RGSC_v3.4594,515,803 - 94,516,069RGD
RGSC_v3.4594,515,804 - 94,516,069UniSTS
RGSC_v3.1594,520,917 - 94,521,182RGD
Celera589,134,454 - 89,134,719UniSTS
RH 3.4 Map5696.7RGD
RH 3.4 Map5696.7UniSTS
Cytogenetic Map5q31UniSTS
Peak: (D5Mit7)
Rat AssemblyChrPosition (strand)Source
RH 3.4 Map5868.1UniSTS
RH 3.4 Map5868.1RGD
RH 2.0 Map5860.4RGD
Cytogenetic Map19q12UniSTS
Flank 2: (D5Mit7)
Rat AssemblyChrPosition (strand)Source
RH 3.4 Map5868.1UniSTS
RH 3.4 Map5868.1RGD
RH 2.0 Map5860.4RGD
Cytogenetic Map19q12UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5193273395Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51136640934Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)59514842103580403Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512651967117554267Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531926122136640934Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)535225432108092802Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)535661945117554267Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535788756147487820Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540777918154732375Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)544404276134502294Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)547745646167946134Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54872203893587756Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)551418671147487820Rat
9589025Epfw7Epididymal fat weight QTL 720.660.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)55180442696804426Rat
7411561Bw134Body weight QTL 134240.001body mass (VT:0001259)body weight gain (CMO:0000420)55180442696804426Rat
2303615Vencon7Ventilatory control QTL 70.001respiration trait (VT:0001943)respiration rate (CMO:0000289)55330956898309568Rat
2303574Gluco42Glucose level QTL 422blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)555903593100903593Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)556902367101902367Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)556991667137729065Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)560072951133313852Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)561086525149030144Rat
2316954Rf57Renal function QTL 570kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)56108665393273130Rat
2316957Pur21Proteinuria QTL 216.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)561086653117554114Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)561612600102331727Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)561612600168109659Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)565696672129038896Rat
2290005Mcs24Mammary carcinoma susceptibility QTL 24mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)568838385113838385Rat
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)571154828108092802Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)571154828108092802Rat
2312671Scl64Serum cholesterol level QTL 640.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)571154828108092802Rat
2302381Bw84Body weight QTL 844.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)571154828108092802Rat
61380Edpm5Estrogen-dependent pituitary mass QTL 54.50.92pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)571154828108092802Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)571552569157225114Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)583424556128424556Rat
1598846Bp293Blood pressure QTL 2933.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)583424556128424556Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)583424556128424556Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)584963058173504662Rat
1331782Rf36Renal function QTL 363.296kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)585800910100745614Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)589502294134502294Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)591585539136585539Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)591585539136585539Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)591585539136585539Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)591884213136884213Rat
1358889Bp261Blood pressure QTL 2612.86arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)593037304133313852Rat
1358909Kidm25Kidney mass QTL 251.87kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)593037304133313852Rat
631527Tls1T-lymphoma susceptibility QTL 100.001thymus integrity trait (VT:0010555)post-insult time to onset of T-cell lymphoma (CMO:0001907)593273130138273130Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)597921932149030144Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)5100723739153577831Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)5101265591141912026Rat
1582212Livw2Liver weight QTL 23.50.0004liver mass (VT:0003402)liver weight as percentage of body weight (CMO:0000141)5102498468123852688Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)5102945579154732228Rat
1600362Mcs19Mammary carcinoma susceptibility QTL 192.5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5103265614107119704Rat
7394708Emca11Estrogen-induced mammary cancer QTL 11mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5103580245117037276Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)5107119214152119214Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5111278451156278451Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5112279412157279412Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5112279412157279412Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5112279412157279412Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5112279412157279412Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5112279412157279412Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)5113059816120566842Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5114140832159140832Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5114140832159140832Rat
7794743Bp373Blood pressure QTL 3730.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5116151740120258073Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5116767924161767924Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5116767924161767924Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5116767924161767924Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5116767924161767924Rat
7794739Bp372Blood pressure QTL 3720.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5122679716130167412Rat
1582230Bw78Body weight QTL 783.20.0016epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)5123852489133313852Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5125455818149568944Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5125455818157225114Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5128687766173687766Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5129038716139099229Rat
11528624Bss114Bone structure and strength QTL 1146.540.000000287femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5129335618131897286Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5130531300145726262Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5131077716173707219Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5132551937173707219Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5133313668138454239Rat
7365049Bp359Blood pressure QTL 359arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5133351969140120264Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5133943857173707219Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5133943857173707219Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5134197905173707219Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5134502121149030144Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5134502140157212422Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5134712342173707219Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5134712342173707219Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5136354114173707219Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5136640731173707219Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5138154677172402610Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Tls1

RGD Curation Notes
Note Type Note Reference
qtl_cross_type backcross  
qtl_disease linked to the increase of T-lymphomas 619600