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Gene: Cachd1 (cache domain containing 1) Rattus norvegicus
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Symbol: Cachd1
Name: cache domain containing 1
Description: Predicted to have voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to localize to the voltage-gated calcium channel complex. Orthologous to human CACHD1 (cache domain containing 1); INTERACTS WITH bisphenol A; C60 fullerene; copper atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC298267; RGD1310770; similar to KIAA1573 protein; VWFA and cache domain-containing protein 1
Orthologs:
Homo sapiens (human) : CACHD1 (cache domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Cachd1 (cache domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cachd1 (cache domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CACHD1 (cache domain containing 1)
Canis lupus familiaris (dog) : CACHD1 (cache domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cachd1 (cache domain containing 1)
Sus scrofa (pig) : CACHD1 (cache domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05119,596,726 - 119,832,326 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5119,727,839 - 119,831,634 (+)Ensembl
Rnor_5.05123,487,662 - 123,714,719 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45121,431,272 - 121,659,471 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15121,436,497 - 121,685,525 (+)NCBI
Celera5113,955,541 - 114,180,443 (+)NCBICelera
Cytogenetic Map5q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cachd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310770
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.