Frmd3 (FERM domain containing 3) - Rat Genome Database

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Gene: Frmd3 (FERM domain containing 3) Rattus norvegicus
Analyze
Symbol: Frmd3
Name: FERM domain containing 3
RGD ID: 1304802
Description: Predicted to enable cytoskeletal protein binding activity. Predicted to be involved in actomyosin structure organization. Predicted to be located in membrane. Predicted to be active in cytoskeleton. Orthologous to human FRMD3 (FERM domain containing 3); INTERACTS WITH 17beta-estradiol; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FERM domain-containing protein 3; LOC298141
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2587,764,755 - 88,031,091 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl587,764,604 - 88,031,091 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx590,196,701 - 90,479,603 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0592,025,732 - 92,308,628 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0592,007,476 - 92,290,379 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0590,040,495 - 90,282,327 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl590,040,495 - 90,282,327 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0594,097,585 - 94,341,865 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4591,723,772 - 91,994,398 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1591,728,873 - 91,999,511 (+)NCBI
Celera586,484,324 - 86,746,178 (+)NCBICelera
Cytogenetic Map5q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoskeleton  (IBA)
membrane  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Frmd3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2587,764,755 - 88,031,091 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl587,764,604 - 88,031,091 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx590,196,701 - 90,479,603 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0592,025,732 - 92,308,628 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0592,007,476 - 92,290,379 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0590,040,495 - 90,282,327 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl590,040,495 - 90,282,327 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0594,097,585 - 94,341,865 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4591,723,772 - 91,994,398 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1591,728,873 - 91,999,511 (+)NCBI
Celera586,484,324 - 86,746,178 (+)NCBICelera
Cytogenetic Map5q31NCBI
FRMD3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38983,242,992 - 83,585,794 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl983,242,990 - 83,538,546 (-)EnsemblGRCh38hg38GRCh38
GRCh37985,857,907 - 86,153,316 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36985,052,120 - 85,343,168 (-)NCBINCBI36Build 36hg18NCBI36
Build 34983,091,858 - 83,382,907NCBI
Celera956,432,293 - 56,723,359 (-)NCBICelera
Cytogenetic Map9q21.32NCBI
HuRef955,682,957 - 55,978,524 (-)NCBIHuRef
CHM1_1986,004,413 - 86,300,106 (-)NCBICHM1_1
T2T-CHM13v2.0995,392,782 - 95,735,519 (-)NCBIT2T-CHM13v2.0
Frmd3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39473,931,454 - 74,120,451 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl473,931,679 - 74,120,451 (+)EnsemblGRCm39 Ensembl
GRCm38474,013,228 - 74,202,214 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl474,013,442 - 74,202,214 (+)EnsemblGRCm38mm10GRCm38
MGSCv37473,659,507 - 73,848,118 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36473,484,892 - 73,661,159 (+)NCBIMGSCv36mm8
Celera472,534,692 - 72,721,968 (+)NCBICelera
Cytogenetic Map4C3NCBI
cM Map436.06NCBI
Frmd3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554323,830,547 - 3,950,910 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554323,830,619 - 3,950,253 (+)NCBIChiLan1.0ChiLan1.0
FRMD3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1982,407,364 - 82,750,896 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0941,339,563 - 41,636,133 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1982,180,826 - 82,476,393 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl982,181,038 - 82,476,399 (-)Ensemblpanpan1.1panPan2
FRMD3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1175,893,014 - 76,183,234 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl175,893,008 - 76,183,228 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha176,542,545 - 76,835,591 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0176,199,058 - 76,492,055 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl176,199,084 - 76,492,049 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1176,007,299 - 76,305,986 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0175,772,558 - 76,065,424 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0176,473,469 - 76,766,890 (+)NCBIUU_Cfam_GSD_1.0
Frmd3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947122,607,156 - 122,853,596 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936828171,521 - 418,105 (-)EnsemblSpeTri2.0
SpeTri2.0NW_004936828171,872 - 418,308 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FRMD3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1031,341,128 - 31,748,439 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11031,341,099 - 31,748,349 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21035,711,076 - 35,832,419 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FRMD3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11294,047,215 - 94,338,263 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1294,047,216 - 94,183,179 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603882,460,479 - 82,751,255 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Frmd3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248095,971,828 - 6,102,400 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248095,970,958 - 6,234,727 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Frmd3
1264 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:28
Count of miRNA genes:25
Interacting mature miRNAs:28
Transcripts:ENSRNOT00000065792
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)534730116104251008Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)534944474113558310Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
9589025Epfw7Epididymal fat weight QTL 720.660.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)54946360094463600Rat
7411561Bw134Body weight QTL 134240.001body mass (VT:0001259)body weight gain (CMO:0000420)54946360094463600Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
2303615Vencon7Ventilatory control QTL 70.001respiration trait (VT:0001943)respiration rate (CMO:0000289)55098389595983895Rat
2303574Gluco42Glucose level QTL 422blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)55349671998496719Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)555715622100715622Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)558829236128034027Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
2316954Rf57Renal function QTL 570kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)55979352890450144Rat
2316957Pur21Proteinuria QTL 216.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)559793528113558156Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)56029343498603051Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
2290005Mcs24Mammary carcinoma susceptibility QTL 24mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)564719390109719390Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)566174080124160948Rat
2312671Scl64Serum cholesterol level QTL 640.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)568984307104251008Rat
61380Edpm5Estrogen-dependent pituitary mass QTL 54.50.92pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)568984307104251008Rat
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)568984307104251008Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
2302381Bw84Body weight QTL 844.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)569540295151018848Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)579584860124584860Rat
1598846Bp293Blood pressure QTL 2933.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)579584860124584860Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)579584860124584860Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1331782Rf36Renal function QTL 363.296kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)58384059897059958Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)584132602129132602Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)587468046132468046Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)587765973132765973Rat

Markers in Region
RH143464  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2588,011,928 - 88,012,078 (-)MAPPERmRatBN7.2
Rnor_6.0590,059,507 - 90,059,656NCBIRnor6.0
Rnor_5.0594,116,597 - 94,116,746UniSTSRnor5.0
RGSC_v3.4591,975,237 - 91,975,386UniSTSRGSC3.4
Celera586,729,631 - 86,729,780UniSTS
RH 3.4 Map5679.8UniSTS
Cytogenetic Map5q31UniSTS
BF386333  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2587,845,660 - 87,845,810 (-)MAPPERmRatBN7.2
Rnor_6.0590,200,829 - 90,200,978NCBIRnor6.0
Rnor_5.0594,260,821 - 94,260,970UniSTSRnor5.0
RGSC_v3.4591,803,349 - 91,803,498UniSTSRGSC3.4
Celera586,564,203 - 86,564,352UniSTS
RH 3.4 Map5680.0UniSTS
Cytogenetic Map5q31UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 30
Low 2 9 10 7 7 44 10 38 3 7
Below cutoff 1 34 34 20 8 20 1 4 18 3 7 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000065792   ⟹   ENSRNOP00000060245
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl587,764,604 - 88,031,091 (+)Ensembl
Rnor_6.0 Ensembl590,040,495 - 90,282,327 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000099661   ⟹   ENSRNOP00000081802
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl587,764,604 - 88,008,789 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000100906   ⟹   ENSRNOP00000095070
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl587,764,604 - 88,031,091 (+)Ensembl
RefSeq Acc Id: NM_001415819   ⟹   NP_001402748
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2587,764,755 - 88,014,127 (+)NCBI
RefSeq Acc Id: NM_001415820   ⟹   NP_001402749
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2587,764,755 - 88,031,091 (+)NCBI
RefSeq Acc Id: XM_039109494   ⟹   XP_038965422
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2587,811,240 - 88,014,137 (+)NCBI
RefSeq Acc Id: XM_039109495   ⟹   XP_038965423
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2587,811,240 - 88,014,137 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001402748 (Get FASTA)   NCBI Sequence Viewer  
  NP_001402749 (Get FASTA)   NCBI Sequence Viewer  
  XP_038965422 (Get FASTA)   NCBI Sequence Viewer  
  XP_038965423 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM10492 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: ENSRNOP00000060245   ⟸   ENSRNOT00000065792
RefSeq Acc Id: XP_038965422   ⟸   XM_039109494
- Peptide Label: isoform X3
- UniProtKB: A6J815 (UniProtKB/TrEMBL),   D3ZR47 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038965423   ⟸   XM_039109495
- Peptide Label: isoform X4
RefSeq Acc Id: ENSRNOP00000081802   ⟸   ENSRNOT00000099661
RefSeq Acc Id: ENSRNOP00000095070   ⟸   ENSRNOT00000100906
RefSeq Acc Id: NP_001402749   ⟸   NM_001415820
- Peptide Label: isoform 2
- UniProtKB: A0A8I6AMS8 (UniProtKB/TrEMBL),   A6J815 (UniProtKB/TrEMBL),   D3ZR47 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001402748   ⟸   NM_001415819
- Peptide Label: isoform 1
- UniProtKB: A0A8I5ZT99 (UniProtKB/TrEMBL),   A6J815 (UniProtKB/TrEMBL),   D3ZR47 (UniProtKB/TrEMBL)
Protein Domains
FERM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZR47-F1-model_v2 AlphaFold D3ZR47 1-500 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1304802 AgrOrtholog
BioCyc Gene G2FUF-40967 BioCyc
Ensembl Genes ENSRNOG00000006503 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000060245.4 UniProtKB/TrEMBL
  ENSRNOP00000081802 ENTREZGENE
  ENSRNOP00000081802.1 UniProtKB/TrEMBL
  ENSRNOP00000095070 ENTREZGENE
  ENSRNOP00000095070.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000065792.4 UniProtKB/TrEMBL
  ENSRNOT00000099661 ENTREZGENE
  ENSRNOT00000099661.1 UniProtKB/TrEMBL
  ENSRNOT00000100906 ENTREZGENE
  ENSRNOT00000100906.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.80.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
InterPro Band_41_domain UniProtKB/TrEMBL
  Ez/rad/moesin-like UniProtKB/TrEMBL
  FERM-adjacent UniProtKB/TrEMBL
  FERM/acyl-CoA-bd_prot_3-hlx UniProtKB/TrEMBL
  FERM_2 UniProtKB/TrEMBL
  FERM_central UniProtKB/TrEMBL
  FERM_CS UniProtKB/TrEMBL
  FERM_domain UniProtKB/TrEMBL
  FERM_N UniProtKB/TrEMBL
  FERM_PH-like_C UniProtKB/TrEMBL
  PH_type UniProtKB/TrEMBL
  Ubiquitin-rel_dom UniProtKB/TrEMBL
KEGG Report rno:298141 UniProtKB/TrEMBL
NCBI Gene 298141 ENTREZGENE
PANTHER 4.1 G PROTEIN UniProtKB/TrEMBL
  FERM DOMAIN-CONTAINING PROTEIN 3 UniProtKB/TrEMBL
Pfam FERM_C UniProtKB/TrEMBL
  FERM_M UniProtKB/TrEMBL
  FERM_N UniProtKB/TrEMBL
  PF08736 UniProtKB/TrEMBL
PhenoGen Frmd3 PhenoGen
PRINTS BAND41 UniProtKB/TrEMBL
  ERMFAMILY UniProtKB/TrEMBL
PROSITE FERM_1 UniProtKB/TrEMBL
  FERM_3 UniProtKB/TrEMBL
SMART B41 UniProtKB/TrEMBL
  FERM_C UniProtKB/TrEMBL
  SM01195 UniProtKB/TrEMBL
Superfamily-SCOP FERM_3-hlx UniProtKB/TrEMBL
  PH domain-like UniProtKB/TrEMBL
  SSF54236 UniProtKB/TrEMBL
UniProt A0A8I5ZT99 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AMS8 ENTREZGENE, UniProtKB/TrEMBL
  A6J815 ENTREZGENE, UniProtKB/TrEMBL
  D3ZR47 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Frmd3  FERM domain containing 3   Frmd3_predicted  FERM domain containing 3 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Frmd3_predicted  FERM domain containing 3 (predicted)      Symbol and Name status set to approved 70820 APPROVED