Cm54 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Cm54 (Cardiac mass QTL 54) Rattus norvegicus

Symbol: Cm54
Name: Cardiac mass QTL 54
RGD ID: 1581510
Also known as: Lvm8
Trait: heart left ventricle mass   (VT:0007031)    
Measurement Type: heart left ventricle weight to body weight ratio   (CMO:0000530)    
LOD Score: 3.4
P Value: 0.05
Variance: 4.0
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25120,740,824 - 143,608,494RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.05125,455,818 - 149,568,944RGD_MAPPER_PIPELINERnor6.0
Rnor_5.05129,313,212 - 153,256,206RGDRnor5.0
RGSC_v3.45126,963,761 - 150,236,260RGDRGSC3.4
RGSC_v3.15126,968,987 - 150,246,299RGD
Cross Type: Not Available
Strains Crossed: WKY/Cfd WKHA/Cfd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
WKHA/Cfd  (IEA)
WKY/Cfd  (IEA)

References

References - curated
1. Llamas B, etal., Mamm Genome. 2005 Sep;16(9):700-11. Epub 2005 Oct 20.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2479Cyp4a2cytochrome P450, family 4, subfamily a, polypeptide 25128922355128934188Rat
2480Cyp4b1cytochrome P450, family 4, subfamily b, polypeptide 15129139019129176860Rat
2504Dio1iodothyronine deiodinase 15122074285122090983Rat
61994Ppt1palmitoyl-protein thioesterase 15135121176135141076Rat
69048Fabp3fatty acid binding protein 35142651962142658707Rat
3642Scp2sterol carrier protein 25122806949122881259Rat
61808Faahfatty acid amide hydrolase5129479774129499018Rat
3946Uroduroporphyrinogen decarboxylase5130464695130468783Rat
2533Edn2endothelin 25133751316133756814Rat
619767Pou3f1POU class 3 homeobox 15136910391136913371Rat
61799Kcnq4potassium voltage-gated channel subfamily Q member 45134275145134326992Rat
2766Guca2aguanylate cyclase activator 2A5133237177133239019Rat
3453Ptprfprotein tyrosine phosphatase, receptor type, F5131741959131824000Rat
2787Hcrtr1hypocretin receptor 15142477214142486674Rat
619786Ptp4a2protein tyrosine phosphatase 4A25142165405142192412Rat
2077Ak2adenylate kinase 25141308650141364633Rat
61874Psmb2proteasome 20S subunit beta 25138970564139002715Rat
620039Prdx1peroxiredoxin 15130147276130162850Rat
620060Hpcahippocalcin5141455616141466252Rat
71027Grik3glutamate ionotropic receptor kainate type subunit 35137767865137989617Rat
62039Plk3polo-like kinase 35130607142130612317Rat
3210Nrdcnardilysin convertase5123755807123818910Rat
70956Tinagl1tubulointerstitial nephritis antigen-like 15142513710142523730Rat
628762Rims3regulating synaptic membrane exocytosis 35134429092134468935Rat
3173Nfycnuclear transcription factor Y subunit gamma5134336802134405372Rat
708492YrdcyrdC N(6)-threonylcarbamoyltransferase domain containing5137110244137115127Rat
620239Kif2ckinesin family member 2C5130637347130662680Rat
620240Rps27a-ps1ribosomal protein S27a, pseudogene 15133180227133180805Rat
728909Pcsk9proprotein convertase subtilisin/kexin type 95121211278121233688Rat
68346Akr1a1aldo-keto reductase family 1 member A15130092945130130277Rat
621042Pik3r3phosphoinositide-3-kinase regulatory subunit 35129700925129772591Rat
628846Cyp4a8cytochrome P450, family 4, subfamily a, polypeptide 85128702130128733476Rat
631435Orc1origin recognition complex, subunit 15123324273123348375Rat
620071Ipo13importin 135131433770131454044Rat
621412Utp11UTP11, small subunit processome component5136931279136946164Rat
620922Rab3bRAB3B, member RAS oncogene family5123629562123697410Rat
2691Gja4gap junction protein, alpha 45139633324139635857Rat
61910Rps8ribosomal protein S85130630362130632932Rat
708349Dlgap3DLG associated protein 35139491972139562625Rat
708491Hpcal4hippocalcin-like 45135454477135466417Rat
621642Tie1tyrosine kinase with immunoglobulin-like and EGF-like domains 15132000013132019658Rat
727884Stk40serine/threonine kinase 405138380049138417802Rat
620952Pdzk1ip1PDZK1 interacting protein 15128618050128623131Rat
631356Cyp4a3cytochrome P450, family 4, subfamily a, polypeptide 35129097571129115488Rat
620477Cdc20cell division cycle 205131966203131970406Rat
708525Fndc5fibronectin type III domain containing 55141481593141491257Rat
621727Foxe3forkhead box E35128445594128446454Rat
621734Ncdnneurochondrin5139037807139047645Rat
2994LckLCK proto-oncogene, Src family tyrosine kinase5141888319141916992Rat
621139Bsndbarttin CLCNK type accessory subunit beta5121251774121260571Rat
621197Marcksl1MARCKS-like 15141851491141853814Rat
620309Cap1cyclase associated actin cytoskeleton regulatory protein 15135142108135168885Rat
628657Spata6spermatogenesis associated 65126593122126676557Rat
621486Sdc3syndecan 35142965659142998390Rat
619820Mrpl37mitochondrial ribosomal protein L375121827892121846187Rat
621427Artnartemin5131458596131470193Rat
61843Ybx1Y box binding protein 15132882137132899108Rat
628823P3h1prolyl 3-hydroxylase 15132841868132856664Rat
621502Ssbp3single stranded DNA binding protein 35121691370121828035Rat
1304583Ago4argonaute RISC component 45138780450138825889Rat
1305174Magohmago homolog, exon junction complex subunit5122639268122646650Rat
2325Cdkn2ccyclin-dependent kinase inhibitor 2C5124411123124416278Rat
1304972StilSTIL, centriolar assembly protein5128520837128573732Rat
620044Guca2bguanylate cyclase activator 2B5133246891133248941Rat
620113Cited4Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 45134246936134247827Rat
621829Gjb4gap junction protein, beta 45139675776139679551Rat
2696Gjb5gap junction protein, beta 55139680670139683588Rat
1303308Tspan1tetraspanin 15129646139129659383Rat
735206Yipf1Yip1 domain family, member 15122112144122147729Rat
3704Slc2a1solute carrier family 2 member 15132717196132745416Rat
620821Eif2b3eukaryotic translation initiation factor 2B subunit gamma5130492167130558692Rat
2398Cpt2carnitine palmitoyltransferase 25122664677122682126Rat
621838Laptm5lysosomal protein transmembrane 55143087759143109807Rat
620045MutyhmutY DNA glycosylase5130274034130286149Rat
1304634Dph2diphthamide biosynthesis 25131428434131431394Rat
1304642Foxd2forkhead box D25128427986128430869Rat
1304573Mast2microtubule associated serine/threonine kinase 25129776293129915502Rat
619984Tesk2testis associated actin remodelling kinase 25130178715130270594Rat
68414St3gal3ST3 beta-galactoside alpha-2,3-sialyltransferase 35131470348131670794Rat
1305000Cldn19claudin 195132862939132870364Rat
1305006Gnl2G protein nucleolar 25137293141137318528Rat
1305570Zmpste24zinc metallopeptidase STE245134627218134660360Rat
1304886Tmem54transmembrane protein 545141449191141455683Rat
1306129Thrap3thyroid hormone receptor associated protein 35138445284138487544Rat
1305550Eps15epidermal growth factor receptor pathway substrate 155124045865124146221Rat
1305552Med8mediator complex subunit 85131948632131949516Rat
1305015Pabpc4poly(A) binding protein, cytoplasmic 45135563142135578985Rat
1306057Macf1microtubule-actin crosslinking factor 15135623729135949097Rat
1306378Kdm4alysine demethylase 4A5131672754131719534Rat
1305090Sh3d21SH3 domain containing 215138429180138444540Rat
621243Slc6a9solute carrier family 6 member 95131374562131408733Rat
727913A3galt2alpha 1,3-galactosyltransferase 25141101329141113760Rat
70987Faf1Fas associated factor 15124426032124790014Rat
1306748Tal1TAL bHLH transcription factor 1, erythroid differentiation factor5128586776128600976Rat
1306999Gpx7glutathione peroxidase 75123145151123153141Rat
1305470Rnf19bring finger protein 19B5141406085141431380Rat
1307066Tmem53transmembrane protein 535130721780130737692Rat
1307970Syncsyncoilin, intermediate filament protein5141631837141656184Rat
1305182Col8a2collagen type VIII alpha 2 chain5138586201138613627Rat
1305022Heylhes-related family bHLH transcription factor with YRPW motif-like5135508160135525152Rat
1304781Trit1tRNA isopentenyltransferase 15135293472135341522Rat
1307027Zmym1zinc finger MYM-type containing 15139364788139381891Rat
1306529Dhcr2424-dehydrocholesterol reductase5121344637121368853Rat
1308525Echdc2enoyl CoA hydratase domain containing 25122915874122934860Rat
1304619Ago1argonaute RISC component 15138722111138757118Rat
1310014Hpdl4-hydroxyphenylpyruvate dioxygenase-like5130286627130288233Rat
1307616Yars1tyrosyl-tRNA synthetase 15141535815141564029Rat
1305345Pars2prolyl-tRNA synthetase 2, mitochondrial5121433993121439158Rat
1305347RGD1305347similar to RIKEN cDNA 2610528J115132048687132051925Rat
1306596Oscp1organic solute carrier partner 15138334552138365220Rat
1305987Uqcrhubiquinol-cytochrome c reductase hinge protein5129545978129554173Rat
1306299Ippintracisternal A particle-promoted polypeptide5129962528130001237Rat
1307029Col9a2collagen type IX alpha 2 chain5134607616134624678Rat
1306776Zc3h12azinc finger CCCH type containing 12A5137376562137385351Rat
1305729Lrp8LDL receptor related protein 85122563468122635434Rat
1305417Atpaf1ATP synthase mitochondrial F1 complex assembly factor 15129265789129293556Rat
1307190Pum1pumilio RNA-binding family member 15142836933142954331Rat
68945Cyp4a1cytochrome P450, family 4, subfamily a, polypeptide 15129123323129137464Rat
1305604Ccdc30coiled-coil domain containing 305132926767133019635Rat
1310174Mfsd2amajor facilitator superfamily domain containing 2A5135225801135240744Rat
1309135Trappc3trafficking protein particle complex subunit 35138559238138572825Rat
1308418Smap2small ArfGAP25134530542134576938Rat
1332845Olr856olfactory receptor 8565132203917132204855Rat
1333268Olr860olfactory receptor 8605132271846132272793Rat
1333490Olr872-psolfactory receptor pseudogene 8725132547785132548722Rat
1310982Col16a1collagen type XVI alpha 1 chain5142388376142442825Rat
1308030Glis1GLIS family zinc finger 15122222155122412141Rat
1309582Zyg11azyg-11 family member A, cell cycle regulator5122935439122973766Rat
1309545Zmym4zinc finger MYM-type containing 45139146665139264398Rat
1308303Atp6v0bATPase H+ transporting V0 subunit B5131423384131424900Rat
1309799Hdac1histone deacetylase 15141853992141881057Rat
1333211Olr859olfactory receptor 8595132261753132265386Rat
1309802Exo5exonuclease 55134494440134497757Rat
1333931Olr855olfactory receptor 8555132186704132187651Rat
1311928Slc1a7solute carrier family 1 member 75122731003122775139Rat
1359481Tceanc2transcription elongation factor A N-terminal and central domain containing 25121923959121963018Rat
1359410Matn1matrilin 15143117198143127140Rat
1311295Dmap1DNA methyltransferase 1-associated protein 15131143726131151760Rat
1306880Rimklaribosomal modification protein rimK-like family member A5133072179133098840Rat
1311252Hivep3HIVEP zinc finger 35133325327133727797Rat
1334007Olr862olfactory receptor 8625132312678132313619Rat
1311081Ndufs5NADH:ubiquinone oxidoreductase subunit S55135974029135979705Rat
1310856Zfyve9zinc finger FYVE-type containing 95123370677123529699Rat
1333113Olr868olfactory receptor 8685132462578132463525Rat
1310806Mmachcmetabolism of cobalamin associated C5130166056130172735Rat
727923Sfpqsplicing factor proline and glutamine rich5139338034139353476Rat
1311508Osbpl9oxysterol binding protein-like 95123819106123962213Rat
1311511Inpp5binositol polyphosphate-5-phosphatase B5136996766137061315Rat
1311770Foxj3forkhead box J35133140344133228489Rat
1333331Olr865olfactory receptor 8655132373994132374941Rat
1311774Btf3l4basic transcription factor 3-like 45123569059123587593Rat
1309083Clspnclaspin5138850119138885037Rat
1333843Olr858olfactory receptor 8585132236461132237399Rat
1310787Lao1L-amino acid oxidase 15132573698132583591Rat
1310741Zswim5zinc finger, SWIM-type containing 55130346519130463791Rat
1309039Ptch2patched 25130571956130592506Rat
1310440Meaf6MYST/Esa1-associated factor 65137344681137369703Rat
1559493Lexmlymphocyte expansion molecule5121375998121401869Rat
1310908Nt5c1a5'-nucleotidase, cytosolic IA5135473107135494400Rat
1307912Phc2polyhomeotic homolog 25141000604141099268Rat
1309431Adgrb2adhesion G protein-coupled receptor B25142299190142362540Rat
1309260Dnali1dynein, axonemal, light intermediate chain 15137318475137327313Rat
1307821Mob3cMOB kinase activator 3C5129306255129315264Rat
1559145Tlr12toll-like receptor 125140961166140964171Rat
1308173Dmrta2DMRT-like family A25124805883124811694Rat
1311411Ppiepeptidylprolyl isomerase E5135406177135419511Rat
1308726Sf3a3splicing factor 3a, subunit 35136967713136987345Rat
1305788Scmh1Scm polycomb group protein homolog 15133991167134115893Rat
1306799Usp24ubiquitin specific peptidase 245121080687121210321Rat
1308295Rhbdl2rhomboid like 25136037489136086542Rat
1309996Ermaperythroblast membrane associated protein (Scianna blood group)5132788847132803030Rat
1309094Toe1target of EGR1, exonuclease5130270485130274050Rat
1310600Rad54lRAD54 like5129575431129605100Rat
1306953Oxct2b3-oxoacid CoA transferase 2B5135396632135398386Rat
1305960Txndc12thioredoxin domain containing 125123587854123612886Rat
1309114Csf3rcolony stimulating factor 3 receptor5138298605138318224Rat
1308150Zfp691zinc finger protein 6915132780259132784954Rat
1308529Ttc4tetratricopeptide repeat domain 45121444714121462385Rat
1305297RlfRLF zinc finger5134711612134767274Rat
1310116Cmpk1cytidine/uridine monophosphate kinase 15128480301128507830Rat
1306570Kpna6karyopherin subunit alpha 65141988111142021483Rat
1306498Zfp362zinc finger protein 3625141119073141153304Rat
1308756Zbtb8azinc finger and BTB domain containing 8a5141693189141721464Rat
1308265Dmbx1diencephalon/mesencephalon homeobox 15129394221129403040Rat
1309823Hectd3HECT domain E3 ubiquitin protein ligase 35130469841130479802Rat
1307175Zmynd12zinc finger, MYND-type containing 125133026917133059985Rat
1307180Fhl3four and a half LIM domains 35136953947136961317Rat
1309163Ago3argonaute RISC catalytic component 35138632367138714230Rat
1311622Bsdc1BSD domain containing 15141798918141827091Rat
1305762Ebna1bp2EBNA1 binding protein 25132148164132152730Rat
1309198Snrnp40small nuclear ribonucleoprotein U5 subunit 405142700632142733776Rat
1310313Tmem59transmembrane protein 595121962507121983625Rat
1306630Cc2d1bcoiled-coil and C2 domain containing 1B5123353289123367343Rat
1307711Klf17Kruppel-like factor 175131293068131315878Rat
1311383Slc5a9solute carrier family 5 member 95126709762126733468Rat
1311396Serinc2serine incorporator 25142592308142614628Rat
1311399Ppcsphosphopantothenoylcysteine synthetase5133023077133026899Rat
1307814Zyg11bzyg-11 family member B, cell cycle regulator5122985548123042735Rat
1311760RragcRas-related GTP binding C5136148239136167773Rat
1308876Eva1beva-1 homolog B5138427083138429602Rat
1308956Mtf1metal-regulatory transcription factor 15137062319137107136Rat
1308919Lrrc42leucine rich repeat containing 425122014678122035792Rat
1308616Szt2SZT2 subunit of KICSTOR complex5131897250131943953Rat
1305274Coa7cytochrome c oxidase assembly factor 75123069356123080942Rat
1305358B4galt2beta-1,4-galactosyltransferase 25131412541131422573Rat
1310351Efcab14EF-hand calcium binding domain 145129218139129258628Rat
1310138Tut4terminal uridylyl transferase 45123201723123306582Rat
1359675Mrps15mitochondrial ribosomal protein S155138321610138332205Rat
1562036RGD1562036similar to ornithine decarboxylase5142551120142563217Rat
1563049RGD1563049RGD15630495133468132133469525Rat
1560436RGD1560436similar to hypothetical protein FLJ205085137198688137205912Rat
1563714Armh1armadillo-like helical domain containing 15130680955130722062Rat
1565942Dynlt4dynein light chain Tctex-type 45130605417130607224Rat
1564486Ccdc163coiled-coil domain containing 1635130172014130178934Rat
1565558Rspo1R-spondin 15137251629137273273Rat
1563973Manealmannosidase, endo-alpha-like5137115154137122299Rat
1561416Hyihydroxypyruvate isomerase5131894575131897709Rat
1563297Tfap2etranscription factor AP-2 epsilon5139009447139030695Rat
1311232Svbpsmall vasohibin binding protein5132808021132813735Rat
1561205Nkain1Sodium/potassium transporting ATPase interacting 15142747702142792665Rat
1564075Slfnl1schlafen-like 15134117634134122105Rat
1560027Elavl4ELAV like RNA binding protein 45125056848125200543Rat
1334318Olr867olfactory receptor 8675132435679132436626Rat
1563467Cdcp2CUB domain containing protein 25121877581121894203Rat
1562996Zscan20zinc finger and SCAN domain containing 205140926596140956285Rat
1561569Tmem69transmembrane protein 695130004888130008466Rat
1564943S100pbpS100P binding protein5141494352141535752Rat
1565728Csmd2CUB and Sushi multiple domains 25140342352140912422Rat
1560989Spocd1SPOC domain containing 15142288822142297113Rat
1564804RGD1564804similar to chromosome 1 open reading frame 505132837135132841744Rat
1562679Epha10EPH receptor A105137139588137175637Rat
1334256Olr871-psolfactory receptor pseudogene 8715132519279132520219Rat
1311937Tmem125transmembrane protein 1255132063162132064566Rat
1560921Dmrtb1DMRT-like family B with proline-rich C-terminal, 15122444853122452483Rat
1564163Fam229afamily with sequence similarity 229, member A5141829716141830705Rat
1563072RGD1563072similar to hypothetical protein FLJ389845138900045138905267Rat
1359609Naspnuclear autoantigenic sperm protein5130057363130083003Rat
1559603Mknk1MAPK interacting serine/threonine kinase 15129318128129357641Rat
1311060Ctps1CTP synthase 15134125022134154155Rat
1311065Tekt2tektin 25138619665138623301Rat
1311069MplMPL proto-oncogene, thrombopoietin receptor5131973897131987472Rat
1559652Nsun4NOP2/Sun RNA methyltransferase 45129511224129532498Rat
1309068AdprsADP-ribosylserine hydrolase5138614022138619296Rat
1559909RGD1559909RGD15599095137109093137110130Rat
1563015Tmem269transmembrane protein 2695132817324132836360Rat
1559786CzibCXXC motif containing zinc binding protein5122648333122657767Rat
1311126Ttc39atetratricopeptide repeat domain 39A5124165102124204973Rat
1311129Prpf38apre-mRNA processing factor 38A5123312461123324160Rat
1332921Olr866olfactory receptor 8665132407421132408368Rat
1311221Lrrc41leucine rich repeat containing 415129554547129575450Rat
628719Cyp4x1cytochrome P450, family 4, subfamily x, polypeptide 15128652844128683338Rat
1359536Pef1penta-EF hand domain containing 15142451791142475061Rat
1332893Olr869olfactory receptor 8695132489097132490044Rat
1562249Zbtb8oszinc finger and BTB domain containing 8 opposite strand5141675502141687148Rat
1560173Ndc1NDC1 transmembrane nucleoporin5122155992122202295Rat
1359562Gpbp1l1GC-rich promoter binding protein 1-like 15130009773130050636Rat
1334300Olr870-psolfactory receptor pseudogene 8705132504419132505360Rat
1561518Ttc22tetratricopeptide repeat domain 225121401973121423130Rat
1561833Zmym6zinc finger MYM-type containing 65139396374139444357Rat
1333749Olr857olfactory receptor 8575132216822132217769Rat
1359450Tmem39btransmembrane protein 39b5142024271142046607Rat
1563440Mroh7maestro heat-like repeat family member 75121463826121509233Rat
1561149RGD1561149similar to mKIAA1522 protein5141564399141593157Rat
1586386Trabd2bTraB domain containing 2B5127941198128158946Rat
1359268Snip1Smad nuclear interacting protein 15137328371137335846Rat
1587504Skint10selection and upkeep of intraepithelial T cells 105127769022127811541Rat
1585989Akirin1akirin 15135989378136004782Rat
1585858Bmp8abone morphogenetic protein 8a5135589839135617785Rat
1359396Pomgnt1protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)5129634274129644150Rat
1584753Olfr1330-ps1olfactory receptor 1330, pseudogene 15132326454132327460Rat
1359231Tssk3testis-specific serine kinase 35141827606141829255Rat
1583461IqccIQ motif containing C5141957901141962143Rat
1583447Ccdc28bcoiled coil domain containing 28B5141962275141967278Rat
621459Khdrbs1KH RNA binding domain containing, signal transduction associated 15142051844142089175Rat
1582959LOC688948similar to ribosomal protein S265130239204130239590Rat
1564921Ppihpeptidylprolyl isomerase H5132906324132924341Rat
1587555LOC689825similar to zinc finger protein 5335127270721127271910Rat
1587570Rps4x-ps3ribosomal protein S4, X-linked, pseudogene 35126842634126843859Rat
1587579Skint1selection and upkeep of intraepithelial T cells 15126786469126814599Rat
1583435Txlnataxilin alpha5141969337141985054Rat
1584589Fam167bfamily with sequence similarity 167, member B5141920695141922342Rat
1566327Skint4selection and upkeep of intraepithelial T cells 45126878834126909044Rat
1562327Zbtb8bzinc finger and BTB domain containing 8b5141765925141781619Rat
1566306Cdca8cell division cycle associated 85137176414137198686Rat
1562911Ccdc24coiled-coil domain containing 245131398766131412395Rat
1583476Dcdc2bdoublecortin domain containing 2B5141950574141957476Rat
1583487Tmem234transmembrane protein 2345141942583141951047Rat
1564776Azin2antizyme inhibitor 25141281310141310415Rat
1584958Bend5BEN domain containing 55126290648126336662Rat
1584354LOC686209similar to olfactory receptor 13405132250763132255279Rat
1565267Zcchc17zinc finger CCHC-type containing 175142658626142700484Rat
1584560Eif3ieukaryotic translation initiation factor 3, subunit I5141935135141942589Rat
1562603RGD1562603hypothetical gene supported by NM_0316055128827304128852403Rat
1566001Lurap1leucine rich adaptor protein 15129618926129628651Rat
1584914Lsm10LSM10, U7 small nuclear RNA associated5138365983138375856Rat
1584916LOC366447similar to farnesyl diphosphate synthetase5129169497129172588Rat
1584917LOC366444similar to Pyruvate kinase isozyme M25129079590129081630Rat
1584918LOC366442similar to Elongation FacTor family member (eft-4)5127824597127825986Rat
1584919LOC366436similar to Beta-enolase (2-phospho-D-glycerate hydro-lyase) (Muscle-specific enolase) (MSE) (Skeletal muscle enolase) (Enolase 3)5124325978124327290Rat
1588589Cct7-ps2chaperonin containing Tcp1, subunit 7 (eta), pseudogene 25138230208138231927Rat
1588591MyclMYCL proto-oncogene, bHLH transcription factor5135274713135281584Rat
1585948Cfap57cilia and flagella associated protein 575132074404132148102Rat
1591379Smim12small integral membrane protein 125139569367139573276Rat
1593768Rbbp4RB binding protein 4, chromatin remodeling factor5141655863141675157Rat
1591357Kti12KTI12 chromatin associated homolog5123601059123602581Rat
1587085LOC679598hypothetical protein LOC6795985132042844132043482Rat
1587151Elovl1ELOVL fatty acid elongase 15131961478131965961Rat
1586982LOC682102hypothetical protein LOC6821025140282041140325815Rat
1591090Calr4calreticulin 45123986870124022436Rat
1591038LOC689589hypothetical protein LOC6895895124276074124295881Rat
1585134Tex38testis expressed 385129260652129265086Rat
1587664LOC688515similar to ribosomal protein L105142737984142738741Rat
1587100LOC679583similar to UPF0197 protein C11orf10 homolog5132041753132042174Rat
1359194Fam151afamily with sequence similarity 151, member A5121514804121527555Rat
2695Gjb3gap junction protein, beta 35139649227139655083Rat
1584842LOC502984similar to 14-3-3 protein theta (14-3-3 protein tau)5138234322138235361Rat
1586169Trim62tripartite motif-containing 625141230830141260629Rat
1583684LOC679803similar to olfactory receptor Olr8695132345164132346165Rat
1584061Kncnkinocilin5129362483129365964Rat
1588266LOC680700similar to ribosomal protein L10a5134578540134579373Rat
1588191LOC680775similar to protein tyrosine kinase 95135068998135070109Rat
1597398Ldlrad1low density lipoprotein receptor class A domain containing 15121984245122000941Rat
1596413Hspb11heat shock protein family B (small), member 115122035588122062421Rat
1597451Cyb5rlcytochrome b5 reductase-like5121846223121868287Rat
1596200Best4bestrophin 45130622194130629045Rat
1593542Shisal2ashisa like 2A5123110547123126842Rat
1591873Bmp8bbone morphogenetic protein 8b5135386058135411337Rat
1592632LOC685515similar to ribosomal protein S115139288466139289140Rat
1596047LOC690462hypothetical protein LOC6904625130966577130967555Rat
1588696Skint8selection and upkeep of intraepithelial T cells 85126764502126773125Rat
1598117LOC679953similar to MRS2-like, magnesium homeostasis factor5132496554132497918Rat
1595858Foxo6forkhead box O65133856800133875922Rat
1595859Eri3ERI1 exoribonuclease family member 35131016146131143347Rat
1597473LOC689013similar to Protein FAM57B5121681560121682371Rat
1597986Map7d1MAP7 domain containing 15138527944138552537Rat
1598210Rnf220ring finger protein 2205130739173130961386Rat
1598211Ccdc17coiled-coil domain containing 175130051158130056676Rat
1592647LOC685500similar to tubulin, alpha 8 like5139285051139286280Rat
1596426Hmgb4high-mobility group box 45140616040140616722Rat
2306719LOC100294508dyslexia susceptibility 2-like5139047847139140709Rat
2319741Tmem35btransmembrane protein 35B5139446317139449947Rat
2318761LOC100362122selection and upkeep of intraepithelial T cells 3-like5126999449127181460Rat
2318892LOC100362090ribosomal protein L36-like5132457835132458216Rat
2320529Btbd19BTB domain containing 195130596966130605403Rat
2321463Tmco2transmembrane and coiled-coil domains 25134664692134669467Rat
2320713LOC100361148ribosomal protein S20-like5130298198130298740Rat
2320727MycbpMyc binding protein5136135955136143163Rat
2320740Scand3-ps3SCAN domain containing 3, pseudogene 35141774309141774802Rat
2321596Rnf11l1ring finger protein 11-like 15124212433124243125Rat
2322990Zfp69zinc finger protein 695134502002134516428Rat
2320877LOC100361083hypothetical LOC1003610835135681076135685238Rat
2320924Oxct2a3-oxoacid CoA transferase 2A5135600812135603045Rat
2321120LOC100360940diablo-like5141744994141746345Rat
2323884LOC100362895heat shock protein 1, alpha-like5138131979138133313Rat
2325411Mir761microRNA 7615123776534123776609Rat
2325460Mir30emicroRNA 30e5134352232134352323Rat
2325590Mir30c1microRNA 30c-15134349237134349325Rat
2324587LOC100363867LRRGT00106-like5121870102121870527Rat
2324815Acot11acyl-CoA thioesterase 115121523833121581699Rat
6491750P3r3urfPIK3R3 upstream open reading frame5129656654129673140Rat
6490490LOC100911818selection and upkeep of intraepithelial T-cells protein 10-like5127636227127678245Rat
6490698LOC10091184740S ribosomal protein S14-like5138350191138350766Rat
6490949LOC100911772selection and upkeep of intraepithelial T-cells protein 5-like5127320857127514355Rat
6493177Agbl4AGBL carboxypeptidase 45125254963126534367Rat
6496493LOC100910768ubiquitin-40S ribosomal protein S27a-like5132604603132605052Rat
6503267LOC100909490uncharacterized LOC1009094905135234810135239773Rat
6500146LOC100910116transcription factor BTF3-like5122951278122951824Rat
6497739LOC100910621uncharacterized LOC1009106215123528822123554132Rat
7497822LOC102547167uncharacterized LOC1025471675121057292121078382Rat
7506262LOC102551042uncharacterized LOC1025510425122296655122299913Rat
7515706Lnc081long non-coding RNA 0815136390882136392827Rat
7649714LOC102550980uncharacterized LOC1025509805130311847130319039Rat
7559302LOC102553423uncharacterized LOC1025534235131809376131814053Rat
7638959LOC10255530740S ribosomal protein S12-like5130485611130486622Rat
7625538LOC102554074uncharacterized LOC1025540745131986391131999442Rat
7545693Podnpodocan5122774536122796755Rat
7546204LOC102548397ankyrin repeat domain-containing protein 13C-like5127376753127380494Rat
7561791LOC102548251uncharacterized LOC1025482515124800951124807191Rat
7548488LOC102551560uncharacterized LOC1025515605122474642122476368Rat
7602702LOC102551009uncharacterized LOC1025510095141158538141159602Rat
7549432LOC102548116uncharacterized LOC1025481165136773468136910189Rat
7549984LOC102547626uncharacterized LOC1025476265136102013136113537Rat
7550681LOC102551249uncharacterized LOC1025512495141397696141406184Rat
7584011LOC10255296160S ribosomal protein L23a-like5141615675141632466Rat
7585186LOC102552694zinc finger CCCH-type antiviral protein 1-like5122692573122699273Rat
7586067LOC102552595uncharacterized LOC1025525955134876093134877844Rat
7691700LOC102553953uncharacterized LOC1025539535131201325131203990Rat
7738149LOC10255467240S ribosomal protein S27-like5123216877123218666Rat
7699232LOC102549026protein DEK-like5127636795127645699Rat
7747039LOC102553361uncharacterized LOC1025533615131535622131540841Rat
9181740LOC103692473PRELI domain-containing protein 1, mitochondrial pseudogene5136972227136973765Rat
9186911LOC103690754zinc finger protein 606-like5131226565131228325Rat
9156987LOC103692485RING-box protein 2 pseudogene5141333329141336006Rat
9112029LOC10369243660S ribosomal protein L28-like5121868202121868751Rat
9354806LOC103692460uncharacterized LOC1036924605131970623131974793Rat
9272641LOC103692478ATP synthase subunit g, mitochondrial pseudogene5138093862138095869Rat
9288945LOC10369247760S ribosomal protein L34 pseudogene5134377624134404815Rat
9340215LOC10369247240S ribosomal protein S23 pseudogene5140005124140005623Rat
9442058LOC103692469uncharacterized LOC1036924695136066095136069791Rat
11356951LOC10835110640S ribosomal protein S15a pseudogene5135950942135951496Rat
11463961LOC108351107U1 small nuclear ribonucleoprotein C pseudogene5138156631138160516Rat
11473258LOC108351036uncharacterized LOC1083510365139878306139886024Rat
11357406LOC108351024uncharacterized LOC1083510245134618801134622353Rat
11444382LOC108351032uncharacterized LOC1083510325138420455138426958Rat
11457244Trnap-agg7transfer RNA proline (anticodon AGG) 75129690563129690637Rat
11436064LOC108351027uncharacterized LOC1083510275135516106135522513Rat
11451090LOC108351140NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene5132695795132696187Rat
11430770LOC108351041uncharacterized LOC1083510415143462993143479155Rat
11415394LOC10835102340S ribosomal protein S29-like5134416881134417425Rat
11373704LOC108351143small nuclear ribonucleoprotein G pseudogene5141831160141832992Rat
11385575LOC108351039uncharacterized LOC1083510395141966262141970497Rat
11386181LOC108351031uncharacterized LOC1083510315137775733137793466Rat
11398866LOC108351105uncharacterized LOC1083511055128430904128442177Rat
11410745LOC108351012uncharacterized LOC1083510125123999719124012690Rat
11380980LOC108351016selection and upkeep of intraepithelial T-cells protein 6-like5127381307127435697Rat
11394148LOC108351040uncharacterized LOC1083510405143007389143020071Rat
11519497LOC108351142uncharacterized LOC1083511425136575295136577468Rat
11478259LOC108351029uncharacterized LOC1083510295137276877137291647Rat
11479750LOC108351020uncharacterized LOC1083510205132160198132164045Rat
11512073LOC108351021uncharacterized LOC1083510215132706788132717161Rat
11515846LOC108351035uncharacterized LOC1083510355139264423139274283Rat
41086853LOC120103368U4 spliceosomal RNA5124264229124264369Rat
41167248LOC120102965polycomb group RING finger protein 6-like5133400653133401469Rat
41203623LOC120103260small nucleolar RNA SNORD103/SNORD855142919643142919716Rat
41323139LOC120102983uncharacterized LOC1201029835140225462140245885Rat
41380462LOC120102984uncharacterized LOC1201029845141159662141166889Rat
41113193LOC120103210U6 spliceosomal RNA5136950184136950283Rat
41250028LOC120103276small nucleolar RNA SNORA2/SNORA34 family5122726968122727103Rat
41250173LOC120102974uncharacterized LOC1201029745136193492136207992Rat
41276989LOC120102969uncharacterized LOC1201029695134320925134321409Rat
41324345LOC120103253small nucleolar RNA SNORA705141723053141723172Rat
41113910LOC120102970uncharacterized LOC1201029705134572672134576457Rat
41141719LOC120102966uncharacterized LOC1201029665133567881133568432Rat
41169774LOC120102947uncharacterized LOC1201029475121856050121859503Rat
41170167LOC120103094histone H3.3-like5128921288128921701Rat
41205584LOC120103255small nucleolar RNA SNORD55/SNORD395130632614130632692Rat
41206420LOC120103218U6 spliceosomal RNA5134473016134473116Rat
41251231LOC120102978uncharacterized LOC1201029785138623438138630836Rat
41279700LOC120102977glyceraldehyde-3-phosphate dehydrogenase-like5137133923137135490Rat
41325539LOC120103333U2 spliceosomal RNA5138177540138177706Rat
41326116LOC120103189U6 spliceosomal RNA5130107105130107211Rat
41358656LOC120103125uncharacterized LOC1201031255136184580136186592Rat
41384438NEWGENE_40934091transfer RNA alanine (anticodon AGC)5137132324137132398Rat
41385175LOC120103092E3 ubiquitin ligase TRAF3IP2-like5127813498127814580Rat
41280430LOC120093124uncharacterized LOC1200931245136125648136148096Rat
41326168LOC12010298160S ribosomal protein L35a-like5139194053139194421Rat
41326586LOC120102967uncharacterized LOC1201029675134139448134147082Rat
41326971LOC120102956iron-sulfur cluster assembly 1 homolog, mitochondrial-like5131247516131248341Rat
41360569NEWGENE_40938314transfer RNA serine (anticodon AGA)5132530789132530871Rat
41360960LOC12010311960S ribosomal protein L9-like5123483635123484270Rat
41174391LOC120103096histone H3.3-like5129008176129008589Rat
41210519NEWGENE_40940579transfer RNA leucine (anticodon AAG)5139325993139326073Rat
41260485LOC120102944uncharacterized LOC1201029445121408508121412443Rat
41390291LOC120102957uncharacterized LOC1201029575131411481131417615Rat
41095357LOC120103101CDC42 small effector protein 1-like5139362311139364531Rat
41096017LOC120103093pyruvate kinase PKM-like5128906060128907436Rat
41119943LOC120102959uncharacterized LOC1201029595131567330131572307Rat
41211224NEWGENE_40926764transfer RNA proline (anticodon AGG)5139379501139379581Rat
41262339NEWGENE_40934091transfer RNA alanine (anticodon AGC)5132993684132993764Rat
41391363LOC120103376U5 spliceosomal RNA5130667018130667133Rat
41150489LOC120103377U5 spliceosomal RNA5130673379130673494Rat
41264577LOC120103306small nucleolar RNA SNORA175124306820124306946Rat
41366809LOC120102953cytochrome P450 4A25129010501129021087Rat
41123726LOC120103118HMG-Y-related protein A-like5123332484123354542Rat
41179363LOC120102968uncharacterized LOC1201029685134304633134310495Rat
41344223LOC120102972uncharacterized LOC1201029725135126397135136679Rat
41156617LOC120103127uncharacterized LOC1201031275137581226137669433Rat
41216010NEWGENE_40934091transfer RNA alanine (anticodon AGC)5130664760130664832Rat
41266532LOC120103178uncharacterized LOC1201031785142143395142144943Rat
41288644LOC120102985uncharacterized LOC1201029855141879927141903495Rat
41369906LOC12010317760S ribosomal protein L35a-like5141753073141753692Rat
41369998LOC120102971prothymosin alpha-like5134786829134787772Rat
41126986LOC120102952uncharacterized LOC1201029525128612314128619258Rat
41194760LOC120103283small nucleolar RNA SNORA555135571702135571833Rat
41290045LOC120102988uncharacterized LOC1201029885142574251142584110Rat
41345979LOC120103122uncharacterized LOC1201031225129690639129700956Rat
41398365LOC120103349small nucleolar RNA SNORA405123218554123218681Rat
41183954LOC120103233U6 spliceosomal RNA5142682775142682877Rat
41196424LOC12010296360S ribosomal protein L21-like5132123799132128190Rat
41219069LOC12010309940S ribosomal protein S14-like5135618647135621991Rat
41291644LOC120103379U6 spliceosomal RNA5129832346129832452Rat
41292423LOC120102976uncharacterized LOC1201029765136995963136996788Rat
41292687LOC120103100atherin-like5138825514138826986Rat
41400278NEWGENE_40926764transfer RNA proline (anticodon AGG)5128635289128635369Rat
41104723LOC120103225U6 spliceosomal RNA5123280963123281069Rat
41105011LOC120103262small nucleolar RNA SNORD385130630642130630711Rat
41129363LOC120102961uncharacterized LOC1201029615131488481131492415Rat
41161320LOC120103325small nucleolar RNA SNORA175143029027143029151Rat
41271559LOC120103206U6 spliceosomal RNA5131979522131979625Rat
41294688LOC120103175uncharacterized LOC1201031755136696341136697828Rat
41351766LOC120102955uncharacterized LOC1201029555129263054129265721Rat
41375413LOC120103264small nucleolar RNA SNORD465130632015130632118Rat
41108103LOC120102987uncharacterized LOC1201029875142426427142436129Rat
41131559LOC120102982H/ACA ribonucleoprotein complex subunit 2-like5139329799139333273Rat
41164338LOC120103305small nucleolar RNA SNORA175139108038139108168Rat
41199780LOC120103232U6 spliceosomal RNA5130338326130338430Rat
41296900LOC120103362U2 spliceosomal RNA5137554592137554650Rat
41378098LOC120103309small nucleolar RNA SNORA175132591434132591567Rat
41404263LOC120103176uncharacterized LOC1201031765138511449138512724Rat
41202666LOC120103298small nucleolar RNA SNORA175143411173143411304Rat
40998077LOC120102943uncharacterized LOC1201029435121360322121364747Rat
41015825LOC120103381U6 spliceosomal RNA5141522271141522377Rat
41015876LOC120102951uncharacterized LOC1201029515128269299128297520Rat
41339692LOC120102954cytochrome P450 4A2-like5128967020128975566Rat
40952488LOC12010312360S ribosomal protein L18-like5130421387130428225Rat
41012747LOC120103378U5 spliceosomal RNA5130680654130680769Rat
41013803LOC120103130uncharacterized LOC1201031305141376764141379404Rat
40955061LOC120102975uncharacterized LOC1201029755136616942136628737Rat
40980620LOC120103171cytochrome P450 4A2-like5129053886129062415Rat
40928802LOC120102989uncharacterized LOC1201029895143282480143329740Rat
40981232LOC120102914malignant T-cell-amplified sequence 1-like5128728574128729067Rat
40958085LOC120102950uncharacterized LOC1201029505124196081124203291Rat
40983791LOC120103282small Cajal body-specific RNA 165142624702142624889Rat
40933816Trnav-aactransfer RNA valine (anticodon AAC)5142136663142136735Rat
40962025LOC120102958uncharacterized LOC1201029585131424452131427443Rat
40985797NEWGENE_40934091transfer RNA alanine (anticodon AGC)5121943838121943912Rat
40986348LOC120102962uncharacterized LOC1201029625131488037131489093Rat
41007268LOC120103126uncharacterized LOC1201031265137454504137462767Rat
40937057LOC120103250U7 small nuclear RNA5122542313122542380Rat
40938313LOC120103340small nucleolar RNA SNORA175139145804139145928Rat
40988753LOC120103293small nucleolar RNA SNORA485120966305120966422Rat
40992020LOC120103231U6 spliceosomal RNA5139610750139610852Rat
40992504LOC12009307260S ribosomal protein L37a-like5139329380139329762Rat
40970507LOC120102945uncharacterized LOC1201029455121621354121625108Rat
41075354LOC120103199U6 spliceosomal RNA5129952187129952290Rat
41311458LOC120102949elongin-C-like5124125937124127436Rat
41311684LOC120102948uncharacterized LOC1201029485122301858122302471Rat
41075546LOC12010317460S ribosomal protein L21-like5135420390135420909Rat
41244502LOC120103173iron-sulfur cluster assembly 1 homolog, mitochondrial-like5131198540131199066Rat
41078215LOC120103131uncharacterized LOC1201031315141692446141694030Rat
41078950LOC120103223U6 spliceosomal RNA5122805182122805288Rat
41245337LOC12010309760S ribosomal protein L7a-like5129956798129962912Rat
41245460LOC120093079olfactory receptor 2A12-like5132293815132294801Rat
41245892LOC120103095pyruvate kinase PKM-like5128992798128994173Rat
41246695LOC120103263small nucleolar RNA SNORD385130631069130631136Rat
41051438Tmem275transmembrane protein 2755129376468129379282Rat
41134400LOC120103170uncharacterized LOC1201031705120785823120801032Rat
41247707LOC120102980uncharacterized LOC1201029805138959115138985806Rat
41030934LOC12010311760S ribosomal protein L9-like5123193865123195154Rat
41031036LOC120102964uncharacterized LOC1201029645132783310132785888Rat
41248448LOC120102979uncharacterized LOC1201029795138714332138722949Rat
41053919LOC120103284small nucleolar RNA SNORA555135573359135573491Rat
41143396LOC120103268U1 spliceosomal RNA5142235554142235706Rat
41338408LOC120103258small nucleolar RNA SNORD103/SNORD855142938289142938371Rat
41151543LOC120103229U6 spliceosomal RNA5137143686137143791Rat
41257289LOC120103187U6 spliceosomal RNA5135941294135941398Rat
41258504LOC120103129uncharacterized LOC1201031295137754470137755982Rat
41221114LOC120103128uncharacterized LOC1201031285137692387137696774Rat
41317252NEWGENE_40926764transfer RNA proline (anticodon AGG)5137428054137428135Rat
41222521LOC120103120uncharacterized LOC1201031205123927866123939165Rat
41222923LOC120102986uncharacterized LOC1201029865142287191142288567Rat
41337561LOC120103121uncharacterized LOC1201031215123891920123896857Rat
41337843LOC120102960uncharacterized LOC1201029605131587421131591432Rat
41334530LOC120102946uncharacterized LOC1201029465121688135121689649Rat
41302851LOC120103238U6 spliceosomal RNA5123754011123754111Rat
41305282LOC120103124uncharacterized LOC1201031245136005287136006293Rat
41018894LOC120103259small nucleolar RNA SNORD103/SNORD855142948418142948500Rat
41238809LOC120103098palmitoyl-protein thioesterase 1-like5135054717135063225Rat
41310032LOC120102973uncharacterized LOC1201029735135454202135456101Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10324D5Lev191835124411616124411799Ratregion
10453D5Mcw15129098900129099033Ratregion
10453D5Mcw15128924597128924722Ratregion
10454D5Wox121185129098910129099034Ratregion
10454D5Wox121185128924607128924723Ratregion
10860D5Wox151195141899404141899523Ratregion
34210D5Mgh141505143608344143608494Ratregion
34210D5Mgh141505143608201143608494Ratregion
34220D5Mgh131445133529271133529419Ratregion
34441D5Mgh202235133916727133916949Ratregion
34443D5Mgh81415143069996143070159Ratregion
34581D5Mgh272445129132447129132675Ratregion
34583D5Rjr11905129132428129132602Ratregion
34603D5Mit192165133752562133752767Ratregion
34706D5Mgh181205134972873134972980Ratregion
11303D5Wox111285132743341132743469Ratregion
11304D5Arb72325132744136132744368Ratregion
33680D5Mit132025131345754131345958Ratregion
33731D5Mit141895131378081131378254Ratregion
33741D15Mit42015138505766138505849Ratregion
33741D15Mit42015138501566138501649Ratregion
33741D15Mit42015138497366138497449Ratregion
33741D15Mit42015138493166138493249Ratregion
36103D5Rat361765138113556138113774Ratregion
36187D5Rat301605128499722128499884Ratregion
37362D5Rat862255133749410133749643Ratregion
37418D17Rat732075134532613134532812Ratregion
37462D5Rat622045136731316136731522Ratregion
35232D5Rat382345143068316143068563Ratregion
35352D5Rat331245136479578136479691Ratregion
35370D5Rat344285136863803136864211Ratregion
35545D5Rat28945120740824120740915Ratregion
37950D5Rat951605124048559124048658Ratregion
36500D5Rat891315142135972142136111Ratregion
36677D5Rat311745133011384133011550Ratregion
36711D5Rat321645132686313132686472Ratregion
35060D5Rat291705129406121129406289Ratregion
35641D5Rat551515133752611133752762Ratregion
35651D5Rat371235141643865141643988Ratregion
39602D5Rat1712035140638332140638557Ratregion
39606D5Rat1642205128477950128478162Ratregion
39640D5Rat1842315137623726137623959Ratregion
39958D5Rat1692005134439349134439543Ratregion
38338D5Rat1081995128033842128034027Ratregion
38510D5Rat632025139989554139989768Ratregion
40018D5Rat1651955127746389127746592Ratregion
40026D5Rat1721575140187897140188064Ratregion
40138D5Rat1601375122994775122994914Ratregion
40174D5Rat1701665137961769137961935Ratregion
40176D5Rat1631325123045178123045306Ratregion
38828D5Rat902085132691196132691399Ratregion
39092D5Rat652065125037723125037935Ratregion
39260D5Rat972245141554182141554412Ratregion
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5073476RH1374581925123465410123465602Ratregion
5071688RH1352272175130465465130465682Ratregion
5063320BF3987721205126296801126296921Ratregion
5063384BF3988351605130463311130463471Ratregion
5064962BE1087731785129547404129547582Ratregion
5066702AU0482011415126673606126673747Ratregion
5066742AU0481771595122168221122168375Ratregion
5066760AU0481672155129866293129866508Ratregion
5066878AU0480972245131081556131081780Ratregion
5067068AU0479841295128425977128426108Ratregion
5067150AU04786305139780068139780099Ratregion
5067240AU0478761815137536771137536952Ratregion
5067324AU0478251625138250874138251038Ratregion
5068370AU0471871485130352168130352316Ratregion
5069924AU0464621225142027862142027984Ratregion
5069991RH944061785142658522142658702Ratregion
5070017RH944201605133238841133239001Ratregion
5069420AU0465121895139084910139085099Ratregion
5069498AU0464562075136689011136689213Ratregion
5069542AU0464282105142031531142032108Ratregion
5070354AI8365961005141490983141491083Ratregion
5070446AI323697825122664974122665056Ratregion
5070448AI8547331165121828677121828793Ratregion
5070490Prdx1705130156177130156228Ratregion
5070490Prdx1705130154646130156228Ratregion
5070520RH1269272215139346949139347170Ratregion
5060354AW5315161835138637864138638047Ratregion
5063616BE1078491505135221060135221210Ratregion
5065200BE1211451905130827004130827194Ratregion
5065388AA9240882145134115585134115799Ratregion
5060370AW5318461725130057396130057570Ratregion
5060504BE1102361525126206402126206554Ratregion
5062216BE1063321555141228181141228336Ratregion
5063806AW5352631595139573906139574065Ratregion
5062666BF4037241075130477886130477993Ratregion
5064134BE1206461535136066162136066315Ratregion
5064226BE1142181865137115820137116006Ratregion
5064328BF3990941945140735719140735913Ratregion
5060246BG3781181805135524668135524848Ratregion
5061928AW5276191905137462533137462723Ratregion
5062094BF3974161415123137746123137887Ratregion
5063588BI3019952075122968657122968864Ratregion
5063684BE1079671735129619479129619652Ratregion
5065368AA9573871805140207909140208089Ratregion
5060482BE1102001525133725776133725928Ratregion
5060572BE1104141505141987876141988026Ratregion
5062194BE1063001705124669402124669572Ratregion
5063866BE1201091515129218313129218464Ratregion
5065834BF4067171285142053394142053522Ratregion
5064314BF3990851605123020640123020800Ratregion
5066046BI3041561875130288704130288891Ratregion
5062958BI3010141535129339283129339435Ratregion
5064566BE1081241845132061064132061248Ratregion
5066152BF4136511295138750307138750436Ratregion
5066254PMC126259P42835141456496141456779Ratregion
5066256PMC126259P52605141456496141456756Ratregion
5063050BE1070861585141652255141652413Ratregion
5064660BF3995232235140911970140912193Ratregion
5061442BI287361915138969972138970063Ratregion
5061498BF3965661305142083316142083446Ratregion
5063232BF4105401635131666124131666287Ratregion
5063254BF4040321525135239268135239420Ratregion
5064904BF4052631345130479505130479639Ratregion
5061592BF4021061095124215449124215558Ratregion
5061642BF3969601835132890613132890796Ratregion
5084260AI1692341875136144576136144763Ratregion
5086247AA9570481845130270585130270769Ratregion
5086295BQ2054791905131671841131672031Ratregion
5087321AI2376081705122062012122062182Ratregion
5082387BI2746542045141854353141854557Ratregion
5082497BF4161251045129533011129533115Ratregion
5086427AI4123681725124023661124023833Ratregion
5086522BM3872141565125145934125146090Ratregion
5087221AW5307261595139553665139553824Ratregion
5087275AA8518801905135142185135142377Ratregion
5087576PMC337033P21295125059245125059374Ratregion
5088098Slc2a11925132744921132745113Ratregion
5089795AU0493682485132207978132208226Ratregion
5082971BF3905191575123368585123368742Ratregion
5087887Glyt12065131408382131408588Ratregion
5087964Inpp5b1735137045591137045764Ratregion
5089063AU0489332005130620272130620472Ratregion
5089811AU0493771835120740728120740911Ratregion
5088094Sdc32275142994052142994279Ratregion
5088387AU0485392935141701721141702014Ratregion
5089427AU0491501185135287060135287178Ratregion
5089441AU0491581925130216523130216715Ratregion
5089549AU0492212225130432062130433042Ratregion
5083733AI1047361315141950892141951023Ratregion
5083833AA8930112345128702186128702420Ratregion
5088601AU0486671975130620275130620472Ratregion
5088733AU0487472995131352840131353141Ratregion
5089697AU0493092335129454661129454896Ratregion
5089731AU0493292245140110017140110241Ratregion
5089737AU0493331305126296934126297064Ratregion
5084038AA9434401925131399543131399735Ratregion
5084072AI1754771045134627279134627383Ratregion
5084090AI4083541215138374298138374419Ratregion
5081655BF4144421215139110739139110860Ratregion
5084422AI169557935124411200124411292Ratregion
5084426AI1695731005131586261131586361Ratregion
5084452AA9461101735138317575138317748Ratregion
5090011AU0494971465139714531139714677Ratregion
5090031AU0495092075125981263125981470Ratregion
5081851BE1185071625142027257142027419Ratregion
5082027BG3726631615141733390141733551Ratregion
5085044AI2376341385128337806128337942Ratregion
5082351BE1192021505141044957141045107Ratregion
5090703AU0499101935126386545126386738Ratregion
5090771AU0499542805142562402142563515Ratregion
5080846RH1418161855123999787123999972Ratregion
5081018RH1419171805131408476131408656Ratregion
5090439AU0497511785121926196121926374Ratregion
5081372AI0298541795141655445141655625Ratregion
5085667AW5355451675140929701140929868Ratregion
5089083AU0489442085123170033123170241Ratregion
5089091AU0489491335134589882134590015Ratregion
5085896AW5358801615128562572128562733Ratregion
5086058AW5294381525124276148124276300Ratregion
5080788RH1417822045130166555130166759Ratregion
5080824RH1418041805130637485130637665Ratregion
5082959BF3904891705129223605129223775Ratregion
5086121BF3877681545123414944123415098Ratregion
5081250RH1420521935129509694129509887Ratregion
5081340Gjb405139676047139676083Ratregion
5084856AI2359971135129610874129610987Ratregion
5084942AA9633881545131965784131965938Ratregion
5083313BF4176501155130427355130427470Ratregion
5086543BQ1930411635135808810135808973Ratregion
5081537BE1172641815128592686128592867Ratregion
5085169BM3898241775139009637139009814Ratregion
5085625BM3906311845137688172137688356Ratregion
5083527BE1004381675135521935135522102Ratregion
5081693BF4081661205134208718134208838Ratregion
5085852BM3909302135141693615141693828Ratregion
5083737AA8012602285138417574138417802Ratregion
5135463D5Uwm692055121238914121239104Ratregion
5135465D5Uwm701985122644113122644287Ratregion
5135467D5Uwm711855126673617126673763Ratregion
5135469D5Uwm722605125008980125009222Ratregion
5502701C1orf1651175126329451126329568Ratregion
5503256UniSTS:23755610885130645951130647039Ratregion
5507559RH6804310385136368334136369629Ratregion
5502971Kcnq41325134276854134276986Ratregion
5504068px-5c81565125426959125427115Ratregion
5507643Dio15835122091100122091683Ratregion
5503855UniSTS:4728555525139650209139650761Ratregion
5503992Dmrtb105122447528122448797Ratregion
5504232RH800012005135989405135989605Ratregion
5508206D5Uwm732505124400291124400525Ratregion
5505054Hdac11115141855340141855753Ratregion
5505042Mpl8625131985255131986117Ratregion
5505438Lepre13985132856190132856588Ratregion
5505500D1S28428985141059414141060900Ratregion
5504414PMC197251P23265139634422139634748Ratregion
5505434Zfp3627725141119410141120182Ratregion
5505778UniSTS:4930306675141829715141830382Ratregion
5505578UniSTS:48497605136910380136911868Ratregion
5505686UniSTS:4893139545132254325132255279Ratregion
5505816UniSTS:49549405136910344136911861Ratregion
5505949UniSTS:49664510255135595728135596753Ratregion
5505984Pou3f1915136911338136911429Ratregion
5505921UniSTS:496549945131966929131967934Ratregion
5506177UniSTS:498727675132005377132005444Ratregion
5506173UniSTS:49860210465137271406137272452Ratregion
5506443UniSTS:47931716815137896104137897785Ratregion
5506715SCP2965122868632122868728Ratregion
5507051UniSTS:2242541545135502643135502797Ratregion
5507013fj50d02.y12385131745458131745796Ratregion
5507059UniSTS:2242831045131423456131423560Ratregion
5507203UniSTS:2252581685135279861135280029Ratregion
5507169UniSTS:2249081775131743133131743310Ratregion
5499675MARC_7377-7378:992008389:13855129639150129639535Ratregion
5499861UniSTS:2350281485139139827139139975Ratregion
5499849UniSTS:2350241765138365001138365177Ratregion
5499851UniSTS:2349962235123367012123367235Ratregion
5499853UniSTS:2350272185138416435138416653Ratregion
5500951MARC_9759-9760:996688576:13095138350339138350648Ratregion
5500262D1S2299E875125058161125058248Ratregion
5500276D11S40661285137989446137989574Ratregion
5500463BB3981563205141283502141283822Ratregion
5499847UniSTS:2350162235133225840133226063Ratregion
5500151UniSTS:2371692805135143159135144585Ratregion
5500172D4Mit2217625135585160135585922Ratregion
5499855UniSTS:235030995138528269138528368Ratregion
5499857UniSTS:2350312315139442883139443114Ratregion
5499859UniSTS:2350413215142792169142792490Ratregion
5499915UniSTS:2354822075138231597138231774Ratregion
5502285RH1242811105142937491142937601Ratregion
5500599RH1361501995130058470130059440Ratregion
5503450BAI2_39384035142362116142362519Ratregion
5500879STS-Z403178895136949122136950011Ratregion
5501127PMC141153P12705124415101124415371Ratregion
5501131PMC141153P23365124411869124412205Ratregion
5501249PMC166405P205141897632141897996Ratregion
5505146Tekt22535138621900138622153Ratregion
5501816MARC_13905-13906:1007570719:16495130471126130471775Ratregion
5502042MARC_26102-26103:1032794289:113585142592797142594155Ratregion
5505616UniSTS:48571605136910345136911864Ratregion
5505812UniSTS:49540514285131693710131695138Ratregion
5502172MARC_7381-7382:996687840:1985129484171129485414Ratregion
5502174MARC_7369-7370:996687826:16505131416164131416814Ratregion
5501980MARC_21798-21799:1025034200:11015130267477130267793Ratregion
5501998MARC_23422-23423:1025023955:36175130586175130586792Ratregion
5502405RH1247451585124789789124789947Ratregion
6480632D5Uwm741855127833594127833751Ratregion
6480634D5Uwm755805124712419124712918Ratregion
Position Markers

Flank 1: (D5Rat28)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25120,740,824 - 120,740,915 (+)MAPPER
Rnor_6.05125,455,818 - 125,455,908NCBI
Rnor_5.05129,313,212 - 129,313,302UniSTS
RGSC_v3.45126,963,761 - 126,963,962RGD
RGSC_v3.45126,963,872 - 126,963,962UniSTS
RGSC_v3.15126,968,987 - 126,969,188RGD
Celera5119,503,904 - 119,503,994UniSTS
SHRSP x BN Map564.9299UniSTS
SHRSP x BN Map564.9299RGD
FHH x ACI Map562.15RGD
Peak: (D5Rat173)
Rat AssemblyChrPosition (strand)Source
RH 3.4 Map5965.51RGD
RH 3.4 Map5965.51UniSTS
SHRSP x BN Map581.8799UniSTS
SHRSP x BN Map581.8799RGD
Flank 2: (D5Mgh14)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25143,608,201 - 143,608,494 (+)MAPPER
mRatBN7.25143,608,344 - 143,608,494 (+)MAPPER
Rnor_6.05149,568,795 - 149,568,944NCBI
Rnor_6.05149,568,588 - 149,568,944NCBI
Rnor_5.05153,256,057 - 153,256,206UniSTS
Rnor_5.05153,255,850 - 153,256,206UniSTS
RGSC_v3.45150,236,111 - 150,236,260UniSTS
RGSC_v3.45150,236,110 - 150,236,260RGD
RGSC_v3.15150,246,149 - 150,246,299RGD
Celera5142,062,533 - 142,062,682UniSTS
Cytogenetic Map5 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)558829236128034027Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)566174080124160948Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)569540295151018848Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)579584860124584860Rat
1598846Bp293Blood pressure QTL 2933.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)579584860124584860Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)579584860124584860Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)584132602129132602Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)587468046132468046Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)587765973132765973Rat
1358889Bp261Blood pressure QTL 2612.86arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)590067849128034027Rat
1358909Kidm25Kidney mass QTL 251.87kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)590067849128034027Rat
631527Tls1T-lymphoma susceptibility QTL 100.001thymus integrity trait (VT:0010555)post-insult time to onset of T-cell lymphoma (CMO:0001907)590450144135450144Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)597059760147465714Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)597570330136479578Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)599216724148607142Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)5103689353148689353Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5105999803150999803Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5106906205151906205Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5106906205151906205Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5106906205151906205Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5106906205151906205Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5106906205151906205Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5108845856153845856Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5108845856153845856Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)5108938288153938288Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5111416838156416838Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5111416838156416838Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5111416838156416838Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5111416838156416838Rat
7794739Bp372Blood pressure QTL 3720.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5117913688125222967Rat
1582230Bw78Body weight QTL 783.20.0016epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)5119085612128034027Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5120740824143608494Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5120740824151018848Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5121846814166846814Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5124160767133749643Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5125392826139989768Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5127798274166875058Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5127798274166875058Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5128033842133011550Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5128506074166875058Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5129132428143070159Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5129132447151006154Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5131345754166875058Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5132717196165560427Rat
7411722Strs6Sensitivity to stroke QTL 63.9cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)5134972980138113556Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5135927956166875058Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5135929696166875058Rat
1331721Bp210Blood pressure QTL 2103.413arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5143069996166846814Rat
2302369Scl60Serum cholesterol level QTL 603.13blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)5143608201161165651Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_statistics_details MapManager QTX used for linkage analysis; analysis was for male rats only 1578726