Cm54 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL: Cm54 (Cardiac mass QTL 54) Rattus norvegicus

Symbol: Cm54
Name: Cardiac mass QTL 54
RGD ID: 1581510
Also known as: Lvm8
Trait: heart left ventricle mass   (VT:0007031)    
Measurement Type: heart left ventricle weight to body weight ratio   (CMO:0000530)    
LOD Score: 3.4
P Value: 0.05
Variance: 4.0
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.05125,455,818 - 149,568,944RGD_MAPPER_PIPELINERnor6.0
Rnor_5.05129,313,212 - 153,256,206RGDRnor5.0
RGSC_v3.45126,963,761 - 150,236,260RGDRGSC3.4
RGSC_v3.15126,968,987 - 150,246,299RGD
Cross Type: Not Available
Strains Crossed: WKY/Cfd WKHA/Cfd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
WKHA/Cfd  (IEA)
WKY/Cfd  (IEA)

References

References - curated
1. Llamas B, etal., Mamm Genome. 2005 Sep;16(9):700-11. Epub 2005 Oct 20.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2479Cyp4a2cytochrome P450, family 4, subfamily a, polypeptide 25134196910134207888Rat
2480Cyp4b1cytochrome P450, family 4, subfamily b, polypeptide 15134508728134526103Rat
2504Dio1iodothyronine deiodinase 15126894837126911532Rat
61994Ppt1palmitoyl-protein thioesterase 15140538260140558163Rat
69048Fabp3fatty acid binding protein 35148528854148535597Rat
3642Scp2sterol carrier protein 25127647934127735703Rat
61808Faahfatty acid amide hydrolase5134852899134872095Rat
3946Uroduroporphyrinogen decarboxylase5135855429135859515Rat
2533Edn2endothelin 25139098472139106396Rat
619767Pou3f1POU class 3 homeobox 15142643599142646580Rat
61799Kcnq4potassium voltage-gated channel subfamily Q member 45139625783139677300Rat
2766Guca2aguanylate cyclase activator 2A5138685634138687476Rat
3453Ptprfprotein tyrosine phosphatase, receptor type, F5137036936137112930Rat
2787Hcrtr1hypocretin receptor 15148346029148355404Rat
619786Ptp4a2protein tyrosine phosphatase 4A25148035501148060752Rat
2077Ak2adenylate kinase 25147185474147204050Rat
61874Psmb2proteasome 20S subunit beta 25144702004144734220Rat
620039Prdx1peroxiredoxin 15135536413135551986Rat
620060Hpcahippocalcin5147295124147305757Rat
71027Grik3glutamate ionotropic receptor kainate type subunit 35143500441143715546Rat
62039Plk3polo-like kinase 35135997725136002900Rat
3210Nrdcnardilysin convertase5128629949128694209Rat
70956Tinagl1tubulointerstitial nephritis antigen-like 15148382702148392729Rat
628762Rims3regulating synaptic membrane exocytosis 35139790395139819014Rat
3173Nfycnuclear transcription factor Y subunit gamma5139687442139760154Rat
708492YrdcyrdC N(6)-threonylcarbamoyltransferase domain containing5142845265142850110Rat
620239Kif2ckinesin family member 2C5136027923136053268Rat
620240Rps27a-ps1ribosomal protein S27a, pseudogene 15138628482138629060Rat
728909Pcsk9proprotein convertase subtilisin/kexin type 95126031368126053726Rat
68346Akr1a1aldo-keto reductase family 1 member A15135482068135498693Rat
621042Pik3r3phosphoinositide-3-kinase regulatory subunit 35135069972135145633Rat
628846Cyp4a8cytochrome P450, family 4, subfamily a, polypeptide 85133978953134008255Rat
631435Orc1origin recognition complex, subunit 15128186651128212901Rat
620071Ipo13importin 135136728744136749187Rat
621412Utp11UTP11, small subunit processome component5142666288142681173Rat
620922Rab3bRAB3B, member RAS oncogene family5128501789128568170Rat
2691Gja4gap junction protein, alpha 45145374688145377221Rat
61910Rps8ribosomal protein S85136020941136023511Rat
708349Dlgap3DLG associated protein 35145234757145304536Rat
708491Hpcal4hippocalcin-like 45140870127140882242Rat
621642Tie1tyrosine kinase with immunoglobulin-like and EGF-like domains 15137294544137321116Rat
727884Stk40serine/threonine kinase 405144112612144150653Rat
620952Pdzk1ip1PDZK1 interacting protein 15133895849133900720Rat
631356Cyp4a3cytochrome P450, family 4, subfamily a, polypeptide 35134468666134484851Rat
620477Cdc20cell division cycle 205137260728137264931Rat
708525Fndc5fibronectin type III domain containing 55147323240147330266Rat
621727Foxe3forkhead box E35133724796133725656Rat
621734Ncdnneurochondrin5144769452144779271Rat
2994LckLCK proto-oncogene, Src family tyrosine kinase5147750976147779627Rat
621139Bsndbarttin CLCNK type accessory subunit beta5126071849126080647Rat
621197Marcksl1MARCKS-like 15147714163147716486Rat
620309Cap1cyclase associated actin cytoskeleton regulatory protein 15140559195140585494Rat
628657Spata6spermatogenesis associated 65131719922131803853Rat
621486Sdc3syndecan 35148923098148956404Rat
619820Mrpl37mitochondrial ribosomal protein L375126656330126666830Rat
621427Artnartemin5136759717136765036Rat
61843Ybx1Y box binding protein 15138319754138336721Rat
628823P3h1prolyl 3-hydroxylase 15138279597138294280Rat
621502Ssbp3single stranded DNA binding protein 35126511339126649830Rat
1304583Ago4argonaute RISC component 45144501875144557165Rat
1305174Magohmago homolog, exon junction complex subunit5127480465127487617Rat
2325Cdkn2ccyclin-dependent kinase inhibitor 2C5129347731129352886Rat
1304972StilSTIL, centriolar assembly protein5133819302133851362Rat
620044Guca2bguanylate cyclase activator 2B5138695591138697641Rat
620113Cited4Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 45139597731139598622Rat
621829Gjb4gap junction protein, beta 45145416343145421122Rat
2696Gjb5gap junction protein, beta 55145422034145440558Rat
1303308Tspan1tetraspanin 15135019206135032412Rat
735206Yipf1Yip1 domain family, member 15126932730126968110Rat
3704Slc2a1solute carrier family 2 member 15138154677138182897Rat
620821Eif2b3eukaryotic translation initiation factor 2B subunit gamma5135882946135949276Rat
2398Cpt2carnitine palmitoyltransferase 25127505646127523016Rat
621838Laptm5lysosomal protein transmembrane 55149015793149069719Rat
620045MutyhmutY DNA glycosylase5135663328135675348Rat
1304634Dph2diphthamide biosynthesis 25136723398136726358Rat
1304642Foxd2forkhead box D25133707194133710186Rat
1304573Mast2microtubule associated serine/threonine kinase 25135149336135285337Rat
619984Tesk2testis associated actin remodelling kinase 25135574172135659842Rat
68414St3gal3ST3 beta-galactoside alpha-2,3-sialyltransferase 35136765309136965642Rat
1305000Cldn19claudin 195138300692138307982Rat
1305006Gnl2G protein nucleolar 25143027970143053418Rat
1305570Zmpste24zinc metallopeptidase STE245139982404140015541Rat
1304886Tmem54transmembrane protein 545147288700147295191Rat
1306129Thrap3thyroid hormone receptor associated protein 35144178248144221318Rat
1305550Eps15epidermal growth factor receptor pathway substrate 155128923809129022268Rat
1305552Med8mediator complex subunit 85137243094137243978Rat
1305015Pabpc4poly(A) binding protein, cytoplasmic 45140978893140994732Rat
1306057Macf1microtubule-actin crosslinking factor 15141039455141363524Rat
1306378Kdm4alysine demethylase 4A5136967650137014402Rat
1305090Sh3d21SH3 domain containing 215144161881144178161Rat
621243Slc6a9solute carrier family 6 member 95136669674136703702Rat
727913A3galt2alpha 1,3-galactosyltransferase 25146933592146945882Rat
70987Faf1Fas associated factor 15129370767129738393Rat
1306748Tal1TAL bHLH transcription factor 1, erythroid differentiation factor5133864401133878604Rat
1306999Gpx7glutathione peroxidase 75128001766128009610Rat
1305470Rnf19bring finger protein 19B5147246032147270892Rat
1307066Tmem53transmembrane protein 535136112417136127976Rat
1307970Syncsyncoilin, intermediate filament protein5147476136147500193Rat
1305182Col8a2collagen type VIII alpha 2 chain5144308527144335142Rat
1305022Heylhes-related family bHLH transcription factor with YRPW motif-like5140923914140940905Rat
1304781Trit1tRNA isopentenyltransferase 15140711943140756893Rat
1307027Zmym1zinc finger MYM-type containing 15145106518145123869Rat
1306529Dhcr2424-dehydrocholesterol reductase5126164708126188926Rat
1308525Echdc2enoyl CoA hydratase domain containing 25127770570127789568Rat
1304619Ago1argonaute RISC component 15144444390144479430Rat
1561181Rpl37a-ps1ribosomal protein L37a, pseudogene 15145071367145071453Rat
1310014Hpdl4-hydroxyphenylpyruvate dioxygenase-like5135675826135677432Rat
1307616Yars1tyrosyl-tRNA synthetase 15147375350147403578Rat
1305345Pars2prolyl-tRNA synthetase 2, mitochondrial5126254090126259204Rat
1305347RGD1305347similar to RIKEN cDNA 2610528J115137356777137360636Rat
1306596Oscp1organic solute carrier partner 15144067391144099693Rat
1305987Uqcrhubiquinol-cytochrome c reductase hinge protein5134919040134927235Rat
1306299Ippintracisternal A particle-promoted polypeptide5135351767135390363Rat
1307029Col9a2collagen type IX alpha 2 chain5139962684139979865Rat
1306776Zc3h12azinc finger CCCH type containing 12A5143111342143120131Rat
1305729Lrp8LDL receptor related protein 85127404348127476636Rat
1305417Atpaf1ATP synthase mitochondrial F1 complex assembly factor 15134641618134667079Rat
1307190Pum1pumilio RNA-binding family member 15148781239148911776Rat
68945Cyp4a1cytochrome P450, family 4, subfamily a, polypeptide 15134492734134507158Rat
1305604Ccdc30coiled-coil domain containing 305138364211138462922Rat
1310174Mfsd2amajor facilitator superfamily domain containing 2A5140642865140657759Rat
1309135Trappc3trafficking protein particle complex 35144281720144295306Rat
1308418Smap2small ArfGAP25139885321139931366Rat
1332845Olr856olfactory receptor 8565137725395137726333Rat
1333268Olr860olfactory receptor 8605137583661137584608Rat
1333490Olr872-psolfactory receptor pseudogene 8725137985849137986786Rat
1310982Col16a1collagen type XVI alpha 1 chain5148257030148311645Rat
1308030Glis1GLIS family zinc finger 15127043344127233395Rat
1309582Zyg11azyg-11 family member A, cell cycle regulator5127790162127828911Rat
1309545Zmym4zinc finger MYM-type containing 45144878212144996431Rat
1308303Atp6v0bATPase H+ transporting V0 subunit B5136718352136719868Rat
1309799Hdac1histone deacetylase 15147716664147743723Rat
1333211Olr859olfactory receptor 8595137572031137575664Rat
1309802Exo5exonuclease 55139849930139853247Rat
1333931Olr855olfactory receptor 8555137496367137499514Rat
1311928Slc1a7solute carrier family 1 member 75127571114127616033Rat
1359481Tceanc2transcription elongation factor A N-terminal and central domain containing 25126746165126782726Rat
1359410Matn1matrilin 15149077412149086957Rat
1311295Dmap1DNA methyltransferase 1-associated protein 15136533791136541795Rat
1306880Rimklaribosomal modification protein rimK-like family member A5138518559138545577Rat
1311252Hivep3HIVEP zinc finger 35138774501139077403Rat
1334007Olr862olfactory receptor 8625137602530137603471Rat
1311081Ndufs5NADH:ubiquinone oxidoreductase subunit S55141390577141405507Rat
1310856Zfyve9zinc finger FYVE-type containing 95128233096128392675Rat
1333113Olr868olfactory receptor 8685137900643137901590Rat
1310806Mmachcmetabolism of cobalamin associated C5135555587135561723Rat
727923Sfpqsplicing factor proline and glutamine rich5145079803145088517Rat
1311508Osbpl9oxysterol binding protein-like 95128694407128839435Rat
1311511Inpp5binositol polyphosphate-5-phosphatase B5142731767142796305Rat
1311770Foxj3forkhead box J35138587968138676948Rat
1333331Olr865olfactory receptor 8655137812062137815850Rat
1311774Btf3l4basic transcription factor 3-like 45128432049128450530Rat
1309083Clspnclaspin5144577670144617507Rat
1333843Olr858olfactory receptor 8585137757938137758876Rat
1310787Lao1L-amino acid oxidase 15138011760138021653Rat
1310741Zswim5zinc finger, SWIM-type containing 55135735825135854525Rat
1309039Ptch2patched 25135962252135983816Rat
1310440Meaf6MYST/Esa1-associated factor 65143081298143103225Rat
1559493Lexmlymphocyte expansion molecule5126196071126221916Rat
1310908Nt5c1a5'-nucleotidase, cytosolic IA5140888862140909322Rat
1307912Phc2polyhomeotic homolog 25146832552146931444Rat
1309431Adgrb2adhesion G protein-coupled receptor B25148168530148231587Rat
1560700RGD1560700similar to palmitoyl-protein thioesterase5140397966140480314Rat
1309260Dnali1dynein, axonemal, light intermediate chain 15143053365143062203Rat
1307821Mob3cMOB kinase activator 3C5134679850134687899Rat
1559145Tlr12toll-like receptor 125146791705146795919Rat
1308173Dmrta2DMRT-like family A25129754295129760045Rat
1311411Ppiepeptidylprolyl isomerase E5140822141140835244Rat
1308726Sf3a3splicing factor 3a, subunit 35142702721142722350Rat
1305788Scmh1Scm polycomb group protein homolog 15139379256139466805Rat
1306799Usp24ubiquitin specific peptidase 245125896725126030411Rat
1308295Rhbdl2rhomboid like 25141462579141511893Rat
1309996Ermaperythroblast membrane associated protein (Scianna blood group)5138227168138240509Rat
1309094Toe1target of EGR1, exonuclease5135659733135663299Rat
1310600Rad54lRAD54 like5134948511134978125Rat
1306953Oxct2b3-oxoacid CoA transferase 2B5140813957140815711Rat
1305960Txndc12thioredoxin domain containing 125128450830128475858Rat
1309114Csf3rcolony stimulating factor 3 receptor5144031353144051966Rat
1308150Zfp691zinc finger protein 6915138217841138222534Rat
1308529Ttc4tetratricopeptide repeat domain 45126264758126282431Rat
1305297RlfRLF zinc finger5140107144140162698Rat
1310116Cmpk1cytidine/uridine monophosphate kinase 15133759722133786452Rat
1306570Kpna6karyopherin subunit alpha 65147852738147867600Rat
1306498Zfp362zinc finger protein 3625146951195146985450Rat
1308756Zbtb8azinc finger and BTB domain containing 8a5147554907147584997Rat
1308265Dmbx1diencephalon/mesencephalon homeobox 15134767436134792840Rat
1309823Hectd3HECT domain E3 ubiquitin protein ligase 35135860578135870535Rat
1307175Zmynd12zinc finger, MYND-type containing 125138470165138505928Rat
1307180Fhl3four and a half LIM domains 35142688962142696330Rat
1309163Ago3argonaute RISC catalytic component 35144355792144436509Rat
1311622Bsdc1BSD domain containing 15147661618147689766Rat
1305762Ebna1bp2EBNA1 binding protein 25137458692137463255Rat
1309198Snrnp40small nuclear ribonucleoprotein U5 subunit 405148577498148610658Rat
1310313Tmem59transmembrane protein 595126783061126804177Rat
1306630Cc2d1bcoiled-coil and C2 domain containing 1B5128215711128229762Rat
1307711Klf17Kruppel-like factor 175136602472136610058Rat
1311383Slc5a9solute carrier family 5 member 95131836927131865218Rat
1311396Serinc2serine incorporator 25148470060148492232Rat
1311399Ppcsphosphopantothenoylcysteine synthetase5138466298138470108Rat
1307814Zyg11bzyg-11 family member B, cell cycle regulator5127844062127878792Rat
1311760RragcRas-related GTP binding C5141572536141590784Rat
1308876Eva1beva-1 homolog B5144160026144161421Rat
1308956Mtf1metal-regulatory transcription factor 15142797340142843896Rat
1308919Lrrc42leucine rich repeat containing 425126835170126856283Rat
1308616Szt2SZT2 subunit of KICSTOR complex5137192120137238384Rat
1305274Coa7cytochrome c oxidase assembly factor 75127925726127936516Rat
1305358B4galt2beta-1,4-galactosyltransferase 25136707510136717345Rat
1310351Efcab14EF-hand calcium binding domain 145134594012134632168Rat
1310138Tut4terminal uridylyl transferase 45128063880128168726Rat
1359675Mrps15mitochondrial ribosomal protein S155144054452144065045Rat
1562036RGD1562036similar to ornithine decarboxylase5148432213148444188Rat
1563049RGD1563049RGD15630495142141295142153604Rat
1560436RGD1560436similar to hypothetical protein FLJ205085142933619142940807Rat
1563714Armh1armadillo-like helical domain containing 15136073056136112344Rat
1565942Dynlt4dynein light chain Tctex-type 45135995128135997807Rat
1564486Ccdc163coiled-coil domain containing 1635135562034135568067Rat
1565558Rspo1R-spondin 15142986526143007847Rat
1563973Manealmannosidase, endo-alpha-like5142850139142857292Rat
1561416Hyihydroxypyruvate isomerase5137189440137192125Rat
1563297Tfap2etranscription factor AP-2 epsilon5144740950144761787Rat
1311232Svbpsmall vasohibin binding protein5138245639138251353Rat
1561205Nkain1Sodium/potassium transporting ATPase interacting 15148635537148669709Rat
1564075Slfnl1schlafen-like 15139467933139473599Rat
1560027Elavl4ELAV like RNA binding protein 45130001387130144557Rat
1334318Olr867olfactory receptor 8675137873745137875662Rat
1563467Cdcp2CUB domain containing protein 25126697728126716150Rat
1562996Zscan20zinc finger and SCAN domain containing 205146760822146788945Rat
1561569Tmem69transmembrane protein 695135394013135397591Rat
1564943S100pbpS100P binding protein5147333890147375151Rat
1565728Csmd2CUB and Sushi multiple domains 25146091167146743436Rat
1560989Spocd1SPOC domain containing 15148138309148166567Rat
1564804RGD1564804similar to chromosome 1 open reading frame 505138274907138279285Rat
1562679Epha10EPH receptor A105142875171142910537Rat
1334256Olr871-psolfactory receptor pseudogene 8715137957338137958278Rat
1311937Tmem125transmembrane protein 1255137371825137373229Rat
1560921Dmrtb1DMRT-like family B with proline-rich C-terminal, 15127266824127273656Rat
1564163Fam229afamily with sequence similarity 229, member A5147692391147693380Rat
1563072RGD1563072similar to hypothetical protein FLJ389845144630291144636569Rat
1359609Naspnuclear autoantigenic sperm protein5135446485135472113Rat
1559603Mknk1MAPK interacting serine/threonine kinase 15134691852134730887Rat
1311060Ctps1CTP synthase 15139475934139505065Rat
1311065Tekt2tektin 25144341955144345500Rat
1311069MplMPL proto-oncogene, thrombopoietin receptor5137268412137282032Rat
1559652Nsun4NOP2/Sun RNA methyltransferase 45134885377134905492Rat
1309068AdprsADP-ribosylserine hydrolase5144336312144341586Rat
1559909RGD1559909RGD15599095142844079142845116Rat
1563015Tmem269transmembrane protein 2695138254946138272589Rat
1559786CzibCXXC motif containing zinc binding protein5127489349127498734Rat
1311126Ttc39atetratricopeptide repeat domain 39A5129024505129083226Rat
1311129Prpf38apre-mRNA processing factor 38A5128174835128186532Rat
1332921Olr866olfactory receptor 8665137845489137846436Rat
1311221Lrrc41leucine rich repeat containing 415134927609134948530Rat
628719Cyp4x1cytochrome P450, family 4, subfamily x, polypeptide 15133929532133959447Rat
1359536Pef1penta-EF hand domain containing 15148320610148343876Rat
1332893Olr869olfactory receptor 8695137927160137928107Rat
1562249Zbtb8oszinc finger and BTB domain containing 8 opposite strand5147535584147547252Rat
1560173Ndc1NDC1 transmembrane nucleoporin5126976636127022941Rat
1359562Gpbp1l1GC-rich promoter binding protein 1-like 15135398926135439772Rat
1334300Olr870-psolfactory receptor pseudogene 8705137942482137943423Rat
1561518Ttc22tetratricopeptide repeat domain 225126217036126243178Rat
1561833Zmym6zinc finger MYM-type containing 65145138667145186285Rat
1333749Olr857olfactory receptor 8575137738298137739246Rat
1359450Tmem39btransmembrane protein 39b5147889871147910057Rat
1563440Mroh7maestro heat-like repeat family member 75126283868126329157Rat
1561149RGD1561149similar to mKIAA1522 protein5147403948147427587Rat
1586386Trabd2bTraB domain containing 2B5133220986133437151Rat
1587504Skint10selection and upkeep of intraepithelial T cells 105133048273133067278Rat
1585989Akirin1akirin 15141415226141430627Rat
1585858Bmp8abone morphogenetic protein 8a5141007462141033511Rat
1359396Pomgnt1protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)5135007343135017220Rat
1584753Olfr1330-ps1olfactory receptor 1330, pseudogene 15137616305137617311Rat
1584102Tmem61transmembrane protein 615126086873126096130Rat
1359231Tssk3testis-specific serine kinase 35147689490147691930Rat
1583461IqccIQ motif containing C5147819040147823281Rat
1583447Ccdc28bcoiled coil domain containing 28B5147823446147828449Rat
621459Khdrbs1KH RNA binding domain containing, signal transduction associated 15147927145147953093Rat
1582959LOC688948similar to ribosomal protein S265135628379135628765Rat
1564921Ppihpeptidylprolyl isomerase H5138343934138361743Rat
1587555LOC689825similar to zinc finger protein 5335132554425132555614Rat
1587570Rps4x-ps3ribosomal protein S4, X-linked, pseudogene 35131972536131973761Rat
1587579Skint1selection and upkeep of intraepithelial T cells 15131915266131944842Rat
1583435Txlnataxilin alpha5147830514147846193Rat
1584589Fam167bfamily with sequence similarity 167, member B5147782692147784345Rat
1566327Skint4selection and upkeep of intraepithelial T cells 45132005656132043655Rat
1562327Zbtb8bzinc finger and BTB domain containing 8b5147628566147644209Rat
1566306Cdca8cell division cycle associated 85142911310142933536Rat
1565822RGD1565822similar to Bcl-w5131563279131563845Rat
1562911Ccdc24coiled-coil domain containing 245136691655136707197Rat
1583476Dcdc2bdoublecortin domain containing 2B5147812287147818577Rat
1583487Tmem234transmembrane protein 2345147803890147812186Rat
1564776Azin2antizyme inhibitor 25147120128147148576Rat
1584958Bend5BEN domain containing 55131257127131312335Rat
1584354LOC686209similar to olfactory receptor 13405137775801137776754Rat
1565267Zcchc17zinc finger CCHC-type containing 175148535519148577315Rat
1584560Eif3ieukaryotic translation initiation factor 3, subunit I5147796580147803853Rat
1562603RGD1562603hypothetical gene supported by NM_0316055134110784134123734Rat
1566001Lurap1leucine rich adaptor protein 15134991997135001720Rat
1584914Lsm10LSM10, U7 small nuclear RNA associated5144106339144108703Rat
1584915LOC366449hypothetical LOC3664495134910128134911103Rat
1584916LOC366447similar to farnesyl diphosphate synthetase5134542203134543849Rat
1584917LOC366444similar to Pyruvate kinase isozyme M25134178742134180127Rat
1584918LOC366442similar to Elongation FacTor family member (eft-4)5133102650133104239Rat
1584919LOC366436similar to Beta-enolase (2-phospho-D-glycerate hydro-lyase) (Muscle-specific enolase) (MSE) (Skeletal muscle enolase) (Enolase 3)5129205651129206966Rat
1588589Cct7-ps2chaperonin containing Tcp1, subunit 7 (eta), pseudogene 25143963076143964795Rat
1588591MyclMYCL proto-oncogene, bHLH transcription factor5140691947140698837Rat
1585948Cfap57cilia and flagella associated protein 575137652118137670067Rat
1585948Cfap57cilia and flagella associated protein 575137383065137458594Rat
1591379Smim12small integral membrane protein 125145311317145315185Rat
1593768Rbbp4RB binding protein 4, chromatin remodeling factor5147499880147535240Rat
1591357Kti12KTI12 chromatin associated homolog5128464035128465557Rat
1587085LOC679598hypothetical protein LOC6795985137351550137352188Rat
1587151Elovl1ELOVL fatty acid elongase 15137255868137260486Rat
1586982LOC682102hypothetical protein LOC6821025146023695146069623Rat
1591090Calr4calreticulin 45128865339128900135Rat
1591038LOC689589hypothetical protein LOC6895895129154544129175596Rat
1585134Tex38testis expressed 385134635913134641376Rat
1587664LOC688515similar to ribosomal protein L105148615218148615623Rat
1587100LOC679583similar to UPF0197 protein C11orf10 homolog5137350471137350873Rat
1359194Fam151afamily with sequence similarity 151, member A5126334847126347598Rat
2695Gjb3gap junction protein, beta 35145390590145397271Rat
1584842LOC502984similar to 14-3-3 protein theta (14-3-3 protein tau)5143967270143969143Rat
1586169Trim62tripartite motif-containing 625147068725147099024Rat
1583684LOC679803similar to olfactory receptor Olr8695137635013137636002Rat
1584061Kncnkinocilin5134736603134744739Rat
1588266LOC680700similar to ribosomal protein L10a5139933423139933794Rat
1588191LOC680775similar to protein tyrosine kinase 95140486089140487513Rat
1597398Ldlrad1low density lipoprotein receptor class A domain containing 15126812168126821437Rat
1596413Hspb11heat shock protein family B (small), member 115126856128126882913Rat
1597451Cyb5rlcytochrome b5 reductase-like5126666934126683069Rat
1596200Best4bestrophin 45136013978136017742Rat
1593542Shisal2ashisa like 2A5127967880127983690Rat
1591873Bmp8bbone morphogenetic protein 8b5140803387140821104Rat
1592632LOC685515similar to ribosomal protein S115145029984145030621Rat
1592599LOC685549similar to nucleolar protein family A, member 25145072515145073109Rat
1596047LOC690462hypothetical protein LOC6904625136356924136357528Rat
1595405LOC681419similar to Histone-binding protein RBBP4 (Retinoblastoma-binding protein 4) (RBBP-4) (Retinoblastoma-binding protein p48) (Chromatin assembly factor 1 subunit C) (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit) (CA...5147505504147509583Rat
1591050Rnf11ring finger protein 115129296271129298513Rat
1594706LOC690554similar to HesB protein5134426154134426708Rat
1588696Skint8selection and upkeep of intraepithelial T cells 85131867780131902258Rat
1598117LOC679953similar to MRS2-like, magnesium homeostasis factor5137934502137935973Rat
1595858Foxo6forkhead box O65139208153139227288Rat
1595859Eri3ERI1 exoribonuclease family member 35136406009136533408Rat
1597473LOC689013similar to Protein FAM57B5126501519126502194Rat
1597986Map7d1MAP7 domain containing 15144250416144274981Rat
1598210Rnf220ring finger protein 2205136129457136351752Rat
1598211Ccdc17coiled-coil domain containing 175135440276135445794Rat
1592647LOC685500similar to tubulin, alpha 8 like5145026298145027616Rat
1596426Hmgb4high-mobility group box 45146445545146446227Rat
2306719LOC100294508dyslexia susceptibility 2-like5144779306144872271Rat
2319741Tmem35btransmembrane protein 35B5145188323145191953Rat
2318761LOC100362122selection and upkeep of intraepithelial T cells 3-like5132125151132218192Rat
2318892LOC100362090ribosomal protein L36-like5137895900137896277Rat
2320529Btbd19BTB domain containing 195135988549135994985Rat
2321463Tmco2transmembrane and coiled-coil domains 25140019871140024458Rat
2320713LOC100361148ribosomal protein S20-like5135687404135687938Rat
2320727MycbpMyc binding protein5141560192141567399Rat
2320740Scand3-ps3SCAN domain containing 3, pseudogene 35147636900147637393Rat
2321596Rnf11l1ring finger protein 11-like 15129091930129113132Rat
2322990Zfp69zinc finger protein 695139856457139871896Rat
2320877LOC100361083hypothetical LOC1003610835141096801141100963Rat
2320924Oxct2a3-oxoacid CoA transferase 2A5141016542141018832Rat
2321120LOC100360940diablo-like5147607350147608936Rat
2323884LOC100362895heat shock protein 1, alpha-like5143864687143866018Rat
2325411Mir761microRNA 7615128651867128651942Rat
2325460Mir30emicroRNA 30e5139702872139702963Rat
2325590Mir30c1microRNA 30c-15139699877139699965Rat
2324587LOC100363867LRRGT00106-like5126691100126691525Rat
2324815Acot11acyl-CoA thioesterase 115126347478126395655Rat
6487330LOC100912375probable rRNA-processing protein EBP2-like5137458672137463255Rat
6491750P3r3urfPIK3R3 upstream reading frame5135029480135046282Rat
6491947Faahlfatty-acid amide hydrolase-like5134330204134349400Rat
6495081LOC100911100olfactory receptor 2A2-like5137793315137794035Rat
6486062LOC100912611claspin-like5146318373146321928Rat
6486286LOC100912566UPF0500 protein C1orf216 homolog5146320693146342159Rat
6486657LOC100912491olfactory receptor 2A2-like5137546828137547798Rat
6486897LOC100912421olfactory receptor 2D2-like5137514724137515729Rat
6490490LOC100911818selection and upkeep of intraepithelial T-cells protein 10-like5132895974132956366Rat
6490698LOC10091184740S ribosomal protein S14-like5144083030144083602Rat
6490949LOC100911772selection and upkeep of intraepithelial T-cells protein 5-like5132577383132636782Rat
6493177Agbl4ATP/GTP binding protein-like 45130742297131656581Rat
6493177Agbl4ATP/GTP binding protein-like 45130286393130305884Rat
6486433LOC100912529olfactory receptor 2B6-like5137564607137565560Rat
6486436LOC100912530claspin-like5146267592146308059Rat
6487120LOC100912451olfactory receptor 2A12-like5137527228137528176Rat
6499312LOC100910316tetratricopeptide repeat protein 39A-like5129042519129082462Rat
6496493LOC100910768ubiquitin-40S ribosomal protein S27a-like5138042662138043110Rat
6503267LOC100909490uncharacterized LOC1009094905140650582140656834Rat
6500146LOC100910116transcription factor BTF3-like5127805888127806504Rat
6497505LOC100910682putative olfactory receptor 2B3-like5137783222137786855Rat
6497677LOC100910606olfactory receptor 2A5-like5137707416137710564Rat
6497739LOC100910621uncharacterized LOC1009106215128346914128393145Rat
6501193LOC100909856metal regulatory transcription factor 1-like5142332571142374765Rat
7497822LOC102547167uncharacterized LOC1025471675125873136125894257Rat
7541491LOC102554911uncharacterized LOC1025549115137470220137474125Rat
7506262LOC102551042uncharacterized LOC1025510425127117472127126617Rat
7530541LOC102554411uncharacterized LOC1025544115142206690142209601Rat
7515706Lnc081long non-coding RNA 0815141823191141825136Rat
7648089LOC102550175uncharacterized LOC1025501755125556759125562653Rat
7649148LOC102551075uncharacterized LOC1025510755133644644133654906Rat
7649714LOC102550980uncharacterized LOC1025509805135702036135708778Rat
7651149LOC102547169protein FAM156A/FAM156B-like5131575900131576510Rat
7652555LOC102551172uncharacterized LOC1025511725127084151127088392Rat
7559302LOC102553423uncharacterized LOC1025534235137100591137109028Rat
7653686LOC102550714uncharacterized LOC1025507145135679532135685912Rat
7638959LOC10255530740S ribosomal protein S12-like5135876933135877355Rat
7625538LOC102554074uncharacterized LOC1025540745137281000137294470Rat
7610254LOC102546333uncharacterized LOC1025463335149283415149289428Rat
7569278LOC102551375uncharacterized LOC1025513755133799162133803319Rat
7593720LOC102552786uncharacterized LOC1025527865148464895148467806Rat
7545693Podnpodocan5127617482127637898Rat
7546204LOC102548397ankyrin repeat domain-containing protein 13C-like5132660527132663779Rat
7561791LOC102548251uncharacterized LOC1025482515129748322129754217Rat
7579364LOC102550979uncharacterized LOC1025509795133480487133498499Rat
7548488LOC102551560uncharacterized LOC1025515605127296238127297979Rat
7602702LOC102551009uncharacterized LOC1025510095146990731146991834Rat
7549432LOC102548116uncharacterized LOC1025481165142505710142643426Rat
7549984LOC102547626uncharacterized LOC1025476265141527368141542483Rat
7582353LOC10255457460S ribosomal protein L9-like5128050738128051591Rat
7550681LOC102551249uncharacterized LOC1025512495147237735147245818Rat
7584011LOC10255296160S ribosomal protein L23a-like5147460714147461064Rat
7552575LOC102553327histone H3.3C-like5134193924134195377Rat
7585186LOC102552694zinc finger CCCH-type antiviral protein 1-like5127534809127540028Rat
7586067LOC102552595uncharacterized LOC1025525955140275395140276952Rat
7691700LOC102553953uncharacterized LOC1025539535134414151134424460Rat
7736125LOC102550204ATP synthase F(0) complex subunit C1, mitochondrial-like5145211448145211849Rat
7693905LOC102552820uncharacterized LOC1025528205140781824140782523Rat
7751883LOC10254933860S ribosomal protein L29-like5144819165144819691Rat
7705627LOC102554130uncharacterized LOC1025541305134437704134460438Rat
7706051LOC102550978uncharacterized LOC1025509785126846750126849843Rat
7684013LOC102549774uncharacterized LOC1025497745146091539146226815Rat
7712624LOC102552311coiled-coil domain-containing protein 30-like5138406680138422630Rat
7738149LOC10255467240S ribosomal protein S27-like5128079031128079561Rat
7716503LOC102546830protein FAM104A-like5131583888131593613Rat
7667036LOC102549606heterogeneous nuclear ribonucleoprotein A3-like5132151049132151732Rat
7667674LOC102549365uncharacterized LOC1025493655126120535126132987Rat
7696407LOC102556248glyceraldehyde-3-phosphate dehydrogenase-like5129429164129430340Rat
7699232LOC102549026protein DEK-like5132896627132906123Rat
7720569LOC102553756sperm head and tail associated protein-like5134377546134382593Rat
7701299LOC102552851polycomb group RING finger protein 6-like5138862635138867258Rat
7674624LOC102548746uncharacterized LOC1025487465142972663142980013Rat
7746807LOC10255111160S ribosomal protein L18-like5135812653135814829Rat
7747039LOC102553361uncharacterized LOC1025533615136822886136835096Rat
9088337LOC103692439transcription elongation factor B polypeptide 1 pseudogene5129003519129005864Rat
9132746LOC103692443cytosolic carboxypeptidase 6-like5131655402131660995Rat
9080733LOC103692474basic proline-rich protein-like5135732670135737038Rat
9181740LOC103692473PRELI domain-containing protein 1, mitochondrial pseudogene5142707231142708704Rat
9186911LOC103690754zinc finger protein 606-like5134442047134444833Rat
9156987LOC103692485RING-box protein 2 pseudogene5147169141147171657Rat
9112029LOC10369243660S ribosomal protein L28-like5126680986126689770Rat
9161289LOC103692433uncharacterized LOC1036924335125574105125587857Rat
9165334LOC103692435uncharacterized LOC1036924355126609593126613573Rat
9166481LOC10369246360S ribosomal protein L26-like 1 pseudogene5138561023138561444Rat
9168491LOC103692468uncharacterized LOC1036924685139560449139568930Rat
9205239LOC1036900075-methylcytosine rRNA methyltransferase NSUN45134362953134383690Rat
9126678LOC103692457uncharacterized LOC1036924575135399050135411874Rat
9128445LOC103692487SPOC domain-containing protein 1-like5148138309148141042Rat
9214042LOC103692442cytochrome P450 4A12-like5131300670131302838Rat
9266844LOC103692462uncharacterized LOC1036924625138361740138369767Rat
9271724LOC103692437spidroin-1-like5127631365127638598Rat
9354806LOC103692460uncharacterized LOC1036924605137265071137266240Rat
9272641LOC103692478ATP synthase subunit g, mitochondrial pseudogene5143826344143828362Rat
9315627LOC103692470uncharacterized LOC1036924705142099349142099645Rat
9358596LOC103692450protein crumbs homolog 1 pseudogene5131155220131161472Rat
9230721LOC103692481uncharacterized LOC1036924815148666091148667732Rat
9278640LOC103692466uncharacterized LOC1036924665139264041139276811Rat
9278649LOC103692475UPF0585 protein C16orf13 homolog pseudogene5137129357137129904Rat
9384816LOC103692451adapter protein CIKS pseudogene5133090186133094909Rat
9238979LOC103692452uncharacterized LOC1036924525133234692133240025Rat
9247752LOC103692465uncharacterized LOC1036924655138874537138942941Rat
9248745LOC103692464mimitin, mitochondrial pseudogene5138929814138930283Rat
9288945LOC10369247760S ribosomal protein L34 pseudogene5139731070139731755Rat
9333568LOC103692476uncharacterized LOC1036924765138577187138587563Rat
9360902LOC103692434uncharacterized LOC1036924345126222108126223759Rat
9379445LOC103689960protein SZT2-like5138904409138915789Rat
9380296LOC103692486serine/arginine repetitive matrix protein 2-like5148034403148050939Rat
9340215LOC10369247240S ribosomal protein S23 pseudogene5145743075145743526Rat
9382807LOC103692458E3 ubiquitin-protein ligase Rnf220 pseudogene5136342187136353052Rat
9365467LOC103692454uncharacterized LOC1036924545134658778134663829Rat
9474170LOC103692467uncharacterized LOC1036924675139357529139361372Rat
9398755LOC103692441uncharacterized LOC1036924415131165568131173370Rat
9440607LOC103689941type II inositol 1,4,5-trisphosphate 5-phosphatase-like5142280816142331538Rat
9442058LOC103692469uncharacterized LOC1036924695141477890141572420Rat
9409388LOC103692471uncharacterized LOC1036924715142405303142407696Rat
11356951LOC10835110640S ribosomal protein S15a pseudogene5141368722141369128Rat
11456677LOC10835114140S ribosomal protein S29-like5139771845139771993Rat
11463961LOC108351107U1 small nuclear ribonucleoprotein C pseudogene5143889833143925900Rat
11472958LOC108351014uncharacterized LOC1083510145131674243131679416Rat
11473258LOC108351036uncharacterized LOC1083510365145616752145622998Rat
11357406LOC108351024uncharacterized LOC1083510245139975921139977330Rat
11444382LOC108351032uncharacterized LOC1083510325144153306144154429Rat
11457244Trnap-agg7transfer RNA proline (anticodon AGG) 75135063657135063725Rat
11457733LOC108351019uncharacterized LOC1083510195134214622134222087Rat
11362414LOC108351010uncharacterized LOC1083510105126457857126470587Rat
11436064LOC108351027uncharacterized LOC1083510275140931860140938267Rat
11363166LOC108351015uncharacterized LOC1083510155131681182131687750Rat
11451090LOC108351140NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene5138133278138133670Rat
11430770LOC108351041uncharacterized LOC1083510415149430783149436326Rat
11452081LOC108351071U1 small nuclear ribonucleoprotein C pseudogene5146278629146280328Rat
11415394LOC10835102340S ribosomal protein S29-like5140068773140068921Rat
11417000LOC108351013uncharacterized LOC1083510135129340749129342489Rat
11425237LOC108351038uncharacterized LOC1083510385147579385147649644Rat
11373704LOC108351143small nuclear ribonucleoprotein G pseudogene5147693929147695090Rat
11407326LOC108351026uncharacterized LOC1083510265140841777140848591Rat
11385575LOC108351039uncharacterized LOC1083510395147827440147830610Rat
11386181LOC108351031uncharacterized LOC1083510315143517066143517886Rat
11398866LOC108351105uncharacterized LOC1083511055133709711133713298Rat
11387498LOC108348114tetratricopeptide repeat protein 39A5129249479129288317Rat
11410745LOC108351012uncharacterized LOC1083510125128875440128901117Rat
11378778NEWGENE_1359268Smad nuclear interacting protein 15143063206143070899Rat
11411378LOC10835102260S ribosomal protein L10a pseudogene5139932959139933273Rat
11390963LOC108351144uncharacterized LOC1083511445148748581148750871Rat
11402885LOC108351018uncharacterized LOC1083510185132308469132322217Rat
11380980LOC108351016selection and upkeep of intraepithelial T-cells protein 6-like5132690221132797501Rat
11381190LOC108351025uncharacterized LOC1083510255139980120139983539Rat
11391873LOC108351030uncharacterized LOC1083510305143651939143668823Rat
11394148LOC108351040uncharacterized LOC1083510405148966201148978039Rat
11519497LOC108351142uncharacterized LOC1083511425142006238142008277Rat
11478259LOC108351029uncharacterized LOC1083510295143016639143025008Rat
11503669LOC108351009uncharacterized LOC1083510095125794478125819133Rat
11503680LOC108351139uncharacterized LOC1083511395136543521136551978Rat
11504105LOC108351037uncharacterized LOC1083510375145861102145863558Rat
11479750LOC108351020uncharacterized LOC1083510205137681696137685602Rat
11508220LOC108351017selection and upkeep of intraepithelial T-cells protein 6-like5132418013132438515Rat
11496438LOC108348080probable rRNA-processing protein EBP25137670134137674730Rat
11510638LOC108351033protein argonaute-4-like5144528465144530397Rat
11512073LOC108351021uncharacterized LOC1083510215138145329138154607Rat
11513153LOC108351028uncharacterized LOC1083510285142880110142889189Rat
11515846LOC108351035uncharacterized LOC1083510355144997217145005142Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10324D5Lev191835129348225129348407Ratregion
10453D5Mcw15134469641134469771Ratregion
10453D5Mcw15134197895134198019Ratregion
10454D5Wox121185134469651134469772Ratregion
10454D5Wox121185134197905134198020Ratregion
10860D5Wox151195147762065147762183Ratregion
34210D5Mgh141505149568795149568944Ratregion
34210D5Mgh141505149568588149568944Ratregion
34220D5Mgh131445142217776142217923Ratregion
34441D5Mgh202235139267814139268035Ratregion
34443D5Mgh81415149029982149030144Ratregion
34581D5Mgh272445134502140134502367Ratregion
34583D5Rjr11905134502121134502294Ratregion
34603D5Mit192165139102145139102349Ratregion
34706D5Mgh181205140386899140387005Ratregion
11303D5Wox111285138180823138180950Ratregion
11304D5Arb72325138181618138181849Ratregion
33680D5Mit132025136640731136640934Ratregion
33731D5Mit141895136673054136673226Ratregion
33741D15Mit42015144227288144227370Ratregion
36103D5Rat361765143846157143846372Ratregion
36187D5Rat301605133778372133778531Ratregion
37362D5Rat862255139098997139099229Ratregion
37418D17Rat732075139887393139887593Ratregion
37462D5Rat622045142463632142463837Ratregion
35232D5Rat382345149028304149028548Ratregion
35352D5Rat331245141912026141912138Ratregion
35370D5Rat344285142595141142595548Ratregion
35545D5Rat28945125455818125455908Ratregion
37922D4Rat902015127732102127732300Ratregion
37950D5Rat951605128926445128926543Ratregion
36500D5Rat891315147999963148000101Ratregion
36677D5Rat311745138454074138454239Ratregion
36711D5Rat321645138123799138123957Ratregion
35060D5Rat291705134779329134779496Ratregion
35641D5Rat551515139102194139102344Ratregion
35651D5Rat371235147487698147487820Ratregion
39602D5Rat1712035146468558146468782Ratregion
39606D5Rat1642205133757372133757583Ratregion
39640D5Rat1842315143359043143359273Ratregion
39958D5Rat1692005139793916139794109Ratregion
38338D5Rat1081995133313668133313852Ratregion
38510D5Rat632025145726049145726262Ratregion
40018D5Rat1651955133025843133026045Ratregion
40026D5Rat1721575145928661145928827Ratregion
40138D5Rat1601375127849942127850080Ratregion
40174D5Rat1701665143693010143693175Ratregion
40176D5Rat1631325127901552127901679Ratregion
38828D5Rat902085138128680138128882Ratregion
39092D5Rat652065129983121129983332Ratregion
39260D5Rat972245147393732147393961Ratregion
39352D5Rat872355138087339138087581Ratregion
39372D5Rat2022415142217793142218037Ratregion
42185D5Arb12025149168029149168245Ratregion
42756D5Rat2612015134783297134783479Ratregion
42757D5Rat2352015134814836134815028Ratregion
42758D5Rat2362015138967851138968054Ratregion
42760D5Rat2382455147072901147073128Ratregion
41288D5Rat1661675136271682136271852Ratregion
41388D5Rat1671285136876851136876982Ratregion
41448D5Rat1681755137133874137134054Ratregion
41630D5Rat1991275134763605134763715Ratregion
41686D5Rat2012165135085475135085682Ratregion
41704D5Rat2002085134510644134510843Ratregion
43881D5Got802535145965418145965670Ratregion
43882D5Got772135145832587145832815Ratregion
43883D5Got782075145755247145755453Ratregion
43884D5Got791765145848315145848490Ratregion
43885D5Got751735145209947145210119Ratregion
43886D5Got812435146092488146092730Ratregion
43886D5Got812435146086033146086275Ratregion
43888D5Got762655145750444145750716Ratregion
43889D5Got741965144493804144493999Ratregion
43890D5Got822605148015077148015336Ratregion
43952D5Got452735130210428130210700Ratregion
43954D5Got471855129401534129401718Ratregion
43959D5Got1342345129007591129007824Ratregion
43960D5Got442775128658448128658724Ratregion
43961D5Got532735126370882126371154Ratregion
43962D5Got501305133677589133677718Ratregion
43964D5Got572115133765646133765856Ratregion
43967D5Got552385134753237134753466Ratregion
43968D5Got591785136647827136648004Ratregion
43969D5Got583185137389672137389983Ratregion
43970D5Got612795138351877138352155Ratregion
43971D5Got561905136579741136579930Ratregion
43972D5Got601955138561440138561632Ratregion
43974D5Got701855139569942139570123Ratregion
43976D5Got732005143757087143757286Ratregion
43977D5Got712655139240879139241141Ratregion
43977D5Got712655139240710139241141Ratregion
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5063806AW5352631595145315818145315976Ratregion
5062666BF4037241075135868620135868726Ratregion
5064134BE1206461535141492110141492262Ratregion
5064226BE1142181865142850806142850991Ratregion
5064328BF3990941945146566750146566943Ratregion
5060246BG3781181805140940422140940601Ratregion
5061928AW5276191905143197025143197214Ratregion
5062094BF3974161415127994446127994586Ratregion
5063588BI3019952075127823413127823619Ratregion
5063684BE1079671735134992551134992723Ratregion
5065368AA9573871805145948705145948884Ratregion
5060482BE1102001525139075360139075511Ratregion
5060572BE1104141505147849049147849198Ratregion
5062194BE1063001705129615953129616122Ratregion
5063866BE1201091515134593615134593765Ratregion
5065834BF4067171285147916903147917030Ratregion
5064314BF3990851605127876635127876794Ratregion
5066046BI3041561875135677904135678090Ratregion
5062958BI3010141535134712918134713069Ratregion
5064566BE1081241845137369728137369911Ratregion
5066152BF4136511295144472586144472714Ratregion
5066254PMC126259P42835147296005147296287Ratregion
5066256PMC126259P52605147296005147296264Ratregion
5063050BE1070861585147496275147496432Ratregion
5064660BF3995232235146743166146743388Ratregion
5061442BI287361915144701413144701503Ratregion
5061498BF3965661305147947305147947434Ratregion
5063232BF4105401635136961021136961183Ratregion
5063254BF4040321525140656330140656481Ratregion
5064904BF4052631345135870239135870372Ratregion
5066572AU0482781785140478529140478783Ratregion
5061592BF4021061095129093702129093810Ratregion
5061642BF3969601835138328230138328412Ratregion
5084260AI1692341875141568813141568999Ratregion
5086247AA9570481845135659835135660018Ratregion
5086295BQ2054791905136966738136966927Ratregion
5087321AI2376081705126882501126882670Ratregion
5082387BI2746542045147717026147717229Ratregion
5082497BF4161251045134906081134906184Ratregion
5082497BF4161251045134383383134383486Ratregion
5086427AI4123681725128901361128901532Ratregion
5086522BM3872141565130092762130092917Ratregion
5087221AW5307261595145295591145295749Ratregion
5087275AA8518801905140559273140559463Ratregion
5087576PMC337033P21295130003785130003913Ratregion
5087716Bcl2l205131563338131563516Ratregion
5088098Slc2a11925138182403138182594Ratregion
5089795AU0493682485137729455137729702Ratregion
5089795AU0493682485137518813137519060Ratregion
5082971BF3905191575128231005128231161Ratregion
5087887Glyt12065136703352136703557Ratregion
5087964Inpp5b1735142780590142780762Ratregion
5087964Inpp5b1735142315821142315993Ratregion
5089063AU0489332005136010852136011051Ratregion
5089811AU0493771835125455722125455904Ratregion
5088094Sdc32275148952067148952293Ratregion
5088387AU0485392935147564315147564607Ratregion
5089427AU0491501185140704313140704430Ratregion
5089441AU0491581925135605701135605892Ratregion
5089549AU0492212225135822807135823785Ratregion
5083733AI1047361315147812032147812162Ratregion
5083833AA8930112345133979010133979243Ratregion
5088601AU0486671975136010855136011051Ratregion
5088733AU0487472995136647817136648115Ratregion
5089697AU0493092335134827750134827982Ratregion
5089697AU0493092335134305054134305286Ratregion
5089731AU0493292245145848295145848518Ratregion
5089737AU0493331305131263414131263543Ratregion
5084038AA9434401925136694516136694707Ratregion
5084072AI1754771045139982466139982569Ratregion
5084090AI4083541215144107152144107272Ratregion
5081655BF4144421215144842382144842502Ratregion
5084422AI169557935129347809129347900Ratregion
5084426AI1695731005136881212136881311Ratregion
5084452AA9461101735144050420144050592Ratregion
5090011AU0494971465145455895145456040Ratregion
5090031AU0495092075130943864130944070Ratregion
5081851BE1185071625147892860147893021Ratregion
5082027BG3726631615147595984147596144Ratregion
5085044AI2376341385133617856133617991Ratregion
5082351BE1192021505146876872146877021Ratregion
5090703AU0499101935131361632131361824Ratregion
5090771AU0499542805148443517148444629Ratregion
5080846RH1418161855128877490128877674Ratregion
5081018RH1419171805136703446136703625Ratregion
5090439AU0497511785126747865126748042Ratregion
5081372AI0298541795147499463147499642Ratregion
5085667AW5355451675146760895146761061Ratregion
5089083AU0489442085128026847128027054Ratregion
5089091AU0489491335139944301139944433Ratregion
5085896AW5358801615133840204133840364Ratregion
5086058AW5294381525129154619129154770Ratregion
5080788RH1417822045135555690135555893Ratregion
5080824RH1418041805136028064136028243Ratregion
5082959BF3904891705134598907134599076Ratregion
5086121BF3877681545128277972128278125Ratregion
5081250RH1420521935134882765134882957Ratregion
5081250RH1420521935134360069134360261Ratregion
5081340Gjb405145417412145417447Ratregion
5084856AI2359971135134983948134984060Ratregion
5084942AA9633881545137260310137260463Ratregion
5083313BF4176501155135818101135818215Ratregion
5086543BQ1930411635141224527141224689Ratregion
5081537BE1172641815133870317133870497Ratregion
5085169BM3898241775144741141144741317Ratregion
5085625BM3906311845143422129143422312Ratregion
5083527BE1004381675140937690140937856Ratregion
5081693BF4081661205139559621139559740Ratregion
5085852BM3909302135147555334147555546Ratregion
5083737AA8012602285144150426144150653Ratregion
5135463D5Uwm692055126058989126059178Ratregion
5135465D5Uwm701985127485081127485254Ratregion
5135467D5Uwm711855131800913131801058Ratregion
5135469D5Uwm722605129955311129955552Ratregion
5502701C1orf1651175131305125131305241Ratregion
5503256UniSTS:23755610885136036529136037616Ratregion
5507559RH6804310385141800651141801945Ratregion
5502971Kcnq41325139627497139627628Ratregion
5504068px-5c81565130371078130371233Ratregion
5507643Dio15835126911650126912232Ratregion
5503855UniSTS:4728555525145391573145392124Ratregion
5503992Dmrtb105127268790127270058Ratregion
5504232RH800012005141415254141415453Ratregion
5508206D5Uwm732505129336585129336818Ratregion
5505054Hdac11115147718013147718425Ratregion
5505042Mpl8625137279787137280648Ratregion
5505438Lepre13985138293811138294208Ratregion
5505500D1S28428985146891329146892814Ratregion
5504414PMC197251P23265145375787145376112Ratregion
5505434Zfp3627725146951533146952304Ratregion
5505778UniSTS:4930306675147692391147693057Ratregion
5505578UniSTS:48497605142643589142645077Ratregion
5505686UniSTS:4893139545137775801137776754Ratregion
5505686UniSTS:4893139545137564607137565560Ratregion
5505816UniSTS:49549405142643553142645070Ratregion
5505949UniSTS:49664510255141011474141012498Ratregion
5505984Pou3f1915142644548142644638Ratregion
5505921UniSTS:496549945137261455137262459Ratregion
5506177UniSTS:498727675137307117137307183Ratregion
5506173UniSTS:49860210465143006304143007349Ratregion
5506443UniSTS:47931716815143627451143629131Ratregion
5506715SCP2965127723816127723911Ratregion
5507051UniSTS:2242541545140918398140918551Ratregion
5507013fj50d02.y12385137040436137040773Ratregion
5507059UniSTS:2242831045136718425136718528Ratregion
5507203UniSTS:2252581685140697116140697283Ratregion
5507169UniSTS:2249081775137038111137038287Ratregion
5499675MARC_7377-7378:992008389:13855135012219135012603Ratregion
5499861UniSTS:2350281485144871390144871537Ratregion
5499849UniSTS:2350241765144097855144098030Ratregion
5499851UniSTS:2349962235128229432128229654Ratregion
5499853UniSTS:2350272185144149287144149504Ratregion
5500951MARC_9759-9760:996688576:13095144083176144083484Ratregion
5500262D1S2299E875130002701130002787Ratregion
5500276D11S40661285143720686143720813Ratregion
5500463BB3981563205147119831147120150Ratregion
5499847UniSTS:2350162235138674300138674522Ratregion
5500151UniSTS:2371692805140560246140561671Ratregion
5500172D4Mit2217625141000907141001668Ratregion
5499855UniSTS:235030995144250742144250840Ratregion
5499857UniSTS:2350312315145184890145185120Ratregion
5499859UniSTS:2350413215148669214148669534Ratregion
5499915UniSTS:2354822075143964466143964642Ratregion
5502285RH1242811105148894662148894771Ratregion
5500599RH1361501995135447589135448558Ratregion
5503450BAI2_39384035148231164148231566Ratregion
5500879STS-Z403178895142684132142685020Ratregion
5501127PMC141153P12705129360167129360436Ratregion
5501127PMC141153P12705129351710129351979Ratregion
5501131PMC141153P23365129348478129348813Ratregion
5501249PMC166405P205147760291147760656Ratregion
5505146Tekt22535144344191144344443Ratregion
5501816MARC_13905-13906:1007570719:16495135861859135862507Ratregion
5502042MARC_26102-26103:1032794289:113585148470547148471904Ratregion
5505616UniSTS:48571605142643554142645073Ratregion
5505812UniSTS:49540514285136988593136990020Ratregion
5502172MARC_7381-7382:996687840:1985134857247134858489Ratregion
5502172MARC_7381-7382:996687840:1985134334552134335794Ratregion
5502174MARC_7369-7370:996687826:16505136711134136711783Ratregion
5501980MARC_21798-21799:1025034200:11015135656727135657042Ratregion
5501998MARC_23422-23423:1025023955:36175135976757135977373Ratregion
5502405RH1247451585129738199129738356Ratregion
6480632D5Uwm741855133112785133112941Ratregion
6480634D5Uwm755805129658979129659475Ratregion
11528623rs1056922315131897286131897286Ratregion
11528621rs1986519875130254591130254591Ratregion
11528622rs1974342915129335618129335618Ratregion
Position Markers

Flank 1: (D5Rat28)
Rat AssemblyChrPosition (strand)Source
Rnor_6.05125,455,818 - 125,455,908NCBI
Rnor_5.05129,313,212 - 129,313,302UniSTS
RGSC_v3.45126,963,872 - 126,963,962UniSTS
RGSC_v3.45126,963,761 - 126,963,962RGD
RGSC_v3.15126,968,987 - 126,969,188RGD
Celera5119,503,904 - 119,503,994UniSTS
SHRSP x BN Map564.9299UniSTS
SHRSP x BN Map564.9299RGD
FHH x ACI Map562.15RGD
Peak: (D5Rat173)
Rat AssemblyChrPosition (strand)Source
RH 3.4 Map5965.51RGD
RH 3.4 Map5965.51UniSTS
SHRSP x BN Map581.8799UniSTS
SHRSP x BN Map581.8799RGD
Flank 2: (D5Mgh14)
Rat AssemblyChrPosition (strand)Source
Rnor_6.05149,568,588 - 149,568,944NCBI
Rnor_6.05149,568,795 - 149,568,944NCBI
Rnor_5.05153,256,057 - 153,256,206UniSTS
Rnor_5.05153,255,850 - 153,256,206UniSTS
RGSC_v3.45150,236,110 - 150,236,260RGD
RGSC_v3.45150,236,111 - 150,236,260UniSTS
RGSC_v3.15150,246,149 - 150,246,299RGD
Celera5142,062,533 - 142,062,682UniSTS
Cytogenetic Map5 RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51136640934Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531926122136640934Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535788756147487820Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540777918154732375Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)544404276134502294Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)547745646167946134Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)551418671147487820Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)556991667137729065Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)560072951133313852Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)561086525149030144Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)561612600168109659Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)565696672129038896Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)571552569157225114Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)583424556128424556Rat
1598846Bp293Blood pressure QTL 2933.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)583424556128424556Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)583424556128424556Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)584963058173504662Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)589502294134502294Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)591585539136585539Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)591585539136585539Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)591585539136585539Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)591884213136884213Rat
1358889Bp261Blood pressure QTL 2612.86arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)593037304133313852Rat
1358909Kidm25Kidney mass QTL 251.87kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)593037304133313852Rat
631527Tls1T-lymphoma susceptibility QTL 100.001thymus integrity trait (VT:0010555)post-insult time to onset of T-cell lymphoma (CMO:0001907)593273130138273130Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)597921932149030144Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)5100723739153577831Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)5101265591141912026Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)5102945579154732228Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)5107119214152119214Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5111278451156278451Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5112279412157279412Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5112279412157279412Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5112279412157279412Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5112279412157279412Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5112279412157279412Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5114140832159140832Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5114140832159140832Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5116767924161767924Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5116767924161767924Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5116767924161767924Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5116767924161767924Rat
7794739Bp372Blood pressure QTL 3720.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5122679716130167412Rat
1582230Bw78Body weight QTL 783.20.0016epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)5123852489133313852Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5125455818149568944Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5125455818157225114Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5128687766173687766Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5129038716139099229Rat
11528624Bss114Bone structure and strength QTL 1146.540.000000287femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5129335618131897286Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5130531300145726262Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5131077716173707219Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5132551937173707219Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5133313668138454239Rat
7365049Bp359Blood pressure QTL 359arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5133351969140120264Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5133943857173707219Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5133943857173707219Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5134197905173707219Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5134502121149030144Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5134502140157212422Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5134712342173707219Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5134712342173707219Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5136354114173707219Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5136640731173707219Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5138154677172402610Rat
7411722Strs6Sensitivity to stroke QTL 63.9cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)5140387005143846157Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5142307322173707219Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5142309061173707219Rat
1331721Bp210Blood pressure QTL 2103.413arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5149029982173687766Rat
2302369Scl60Serum cholesterol level QTL 603.13blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)5149568588167739697Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_statistics_details MapManager QTX used for linkage analysis; analysis was for male rats only 1578726