Wbc1 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Wbc1 (White blood cell count QTL 1) Rattus norvegicus

Symbol: Wbc1
Name: White blood cell count QTL 1
RGD ID: 1300122
Previously known as: Specialized Center of Research QTL 125; SCOR125
Trait: leukocyte quantity   (VT:0000217)    
Measurement Type: total white blood cell count   (CMO:0000365)    
LOD Score: 2.75
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr85130,678,987 - 145,274,255RGD_MAPPER_PIPELINE
mRatBN7.25125,392,826 - 139,989,768RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.05130,531,300 - 145,726,262RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0592,225,721 - 149,494,629RGDRnor5.0
RGSC_v3.4589,261,341 - 147,065,912RGDRGSC3.4
RGSC_v3.1589,253,932 - 147,075,951RGD
Cross Type: Not Available
Strains Crossed: BN/SsNHsd SS/JrHsdMcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
heart disease  (IAGP)
Inflammation  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/SsNHsd  (IEA)
SS/JrHsdMcwi  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genomic map of cardiovascular phenotypes of hypertension in female Dahl S rats. Moreno C, etal., Physiol Genomics 2003 Nov 11;15(3):243-57. Epub 2003 Oct 07.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
6493177Agbl4AGBL carboxypeptidase 45125254963126534367Rat
1584958Bend5BEN domain containing 55126290648126336662Rat
628657Spata6spermatogenesis associated 65126593122126676557Rat
1311383Slc5a9solute carrier family 5 member 95126709762126733468Rat
1588696Skint8selection and upkeep of intraepithelial T cells 85126764502126773125Rat
1587579Skint1selection and upkeep of intraepithelial T cells 15126786469126814599Rat
1587570Rps4x-ps3ribosomal protein S4, X-linked, pseudogene 35126842634126843859Rat
1566327Skint2selection and upkeep of intraepithelial T cells 25126878834126909044Rat
2318761Skint4l1selection and upkeep of intraepithelial T cells 4 like 15126999449127181460Rat
1587555Zfp385b-ps1zinc finger protein 385B, pseudogene 15127270721127271910Rat
6490949Skint4selection and upkeep of intraepithelial T cells 45127320857127514355Rat
7546204Ankrd13c-ps1ankyrin repeat domain 13C, pseudogene 15127376753127380494Rat
11380980Skint5lselection and upkeep of intraepithelial T cells 5 like5127381307127435697Rat
6490490LOC100911818selection and upkeep of intraepithelial T-cells protein 10-like5127636227127678245Rat
7699232Dek-ps1DEK proto-oncogene, pseudogene 15127636795127645699Rat
1587504Skint10selection and upkeep of intraepithelial T cells 105127769022127811541Rat
41385175Traf3ip2-ps1Traf3 interacting protein 2, pseudogene 15127813498127814580Rat
1584918Eef1a1-ps9eukaryotic translation elongation factor 1 alpha 1, pseudogene 95127824597127825986Rat
1586386Trabd2bTraB domain containing 2B5127941198128158946Rat
1304642Foxd2forkhead box D25128427986128430709Rat
11398866LOC108351105uncharacterized LOC1083511055128430904128442177Rat
621727Foxe3forkhead box E35128444912128446494Rat
1310116Cmpk1cytidine/uridine monophosphate kinase 15128480301128507830Rat
1304972StilSTIL, centriolar assembly protein5128520837128573732Rat
1306748Tal1TAL bHLH transcription factor 1, erythroid differentiation factor5128586776128600976Rat
41126986LOC120102952uncharacterized LOC1201029525128612314128619258Rat
620952Pdzk1ip1PDZK1 interacting protein 15128618050128623131Rat
41400278Trnap-agg66transfer RNA proline (anticodon AGG) 665128635289128635369Rat
628719Cyp4x1cytochrome P450, family 4, subfamily x, polypeptide 15128651681128683338Rat
628846Cyp4a8cytochrome P450, family 4, subfamily a, polypeptide 85128702130128733476Rat
40981232Mcts1-ps1MCTS1, re-initiation and release factor, pseudogene 15128728574128729067Rat
1562603Cyp4a8-ps1cytochrome P450, family 4, subfamily a, polypeptide 8, pseudogene 15128827304128852403Rat
41096017Pkm-ps4pyruvate kinase M1/2, pseudogene 45128906060128907436Rat
41170167H3f3cl1H3 histone, family 3C like 15128921288128921701Rat
2479Cyp4a2cytochrome P450, family 4, subfamily a, polypeptide 25128922355128934188Rat
41339692Cyp4a2-ps1cytochrome P450, family 4, subfamily a, polypeptide 2, pseudogene 15128967020128975566Rat
41245892Pkm-ps5pyruvate kinase M1/2, pseudogene 55128992798128994173Rat
41174391H3f3l2H3.3 histone like 25129008176129008589Rat
41366809Cyp4a2l1cytochrome P450, family 4, subfamily a, polypeptide 2 like 15129010501129021087Rat
40980620Cyp4a2-ps2cytochrome P450, family 4, subfamily a, polypeptide 2, pseudogene 25129053886129062415Rat
1584917Pkm-ps13pyruvate kinase M1/2, pseudogene 135129079590129081630Rat
631356Cyp4a3cytochrome P450, family 4, subfamily a, polypeptide 35129097571129115488Rat
68945Cyp4a1cytochrome P450, family 4, subfamily a, polypeptide 15129123323129137464Rat
2480Cyp4b1cytochrome P450, family 4, subfamily b, polypeptide 15129139019129176860Rat
1584916Fdps-ps2farnesyl diphosphate synthase, pseudogene 25129169497129172588Rat
1310351Efcab14EF-hand calcium binding domain 145129218139129258628Rat
1585134Tex38testis expressed 385129260652129265086Rat
1305417Atpaf1ATP synthase mitochondrial F1 complex assembly factor 15129265789129292463Rat
1307821Mob3cMOB kinase activator 3C5129306255129315264Rat
1559603Mknk1MAPK interacting serine/threonine kinase 15129318128129357641Rat
1584061Kncnkinocilin5129363464129366907Rat
41051438Tmem275transmembrane protein 2755129376602129377135Rat
1308265Dmbx1diencephalon/mesencephalon homeobox 15129394221129403040Rat
61808Faahfatty acid amide hydrolase5129479774129499018Rat
1559652Nsun4NOP2/Sun RNA methyltransferase 45129511224129532498Rat
1305987Uqcrhubiquinol-cytochrome c reductase hinge protein5129545978129554173Rat
1311221Lrrc41leucine rich repeat containing 415129554547129575450Rat
1310600Rad54lRAD54 like5129575431129605100Rat
1566001Lurap1leucine rich adaptor protein 15129618926129628651Rat
1359396Pomgnt1protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)5129634274129644150Rat
1303308Tspan1tetraspanin 15129646139129659383Rat
6491750P3r3urfPIK3R3 upstream open reading frame5129656654129673140Rat
11457244Trnap-agg7transfer RNA proline (anticodon AGG) 75129690563129690637Rat
41345979LOC120103122uncharacterized LOC1201031225129690639129700956Rat
621042Pik3r3phosphoinositide-3-kinase regulatory subunit 35129700925129772591Rat
1304573Mast2microtubule associated serine/threonine kinase 25129776293129915502Rat
41291644LOC120103379U6 spliceosomal RNA5129832346129832452Rat
41075354LOC120103199U6 spliceosomal RNA5129952187129952290Rat
41245337Rpl7a-ps20ribosomal protein L7a, pseudogene 205129956798129962912Rat
1306299Ippintracisternal A particle-promoted polypeptide5129962528130001237Rat
1561569Tmem69transmembrane protein 695130004888130008466Rat
1359562Gpbp1l1GC-rich promoter binding protein 1-like 15130009768130050636Rat
1598211Ccdc17coiled-coil domain containing 175130051158130056676Rat
1359609Naspnuclear autoantigenic sperm protein5130057363130083003Rat
68346Akr1a1aldo-keto reductase family 1 member A15130092945130130277Rat
41326116LOC120103189U6 spliceosomal RNA5130107105130107211Rat
620039Prdx1peroxiredoxin 15130147258130162856Rat
1310806Mmachcmetabolism of cobalamin associated C5130166056130172735Rat
1564486Ccdc163coiled-coil domain containing 1635130172014130178934Rat
619984Tesk2testis associated actin remodelling kinase 25130178715130270594Rat
1582959Rps26l4ribosomal protein S26 like 45130239204130239590Rat
1309094Toe1target of EGR1, exonuclease5130270484130274050Rat
620045MutyhmutY DNA glycosylase5130274034130286149Rat
1310014Hpdl4-hydroxyphenylpyruvate dioxygenase-like5130286627130288233Rat
2320713Rps20-ps2ribosomal protein S20, pseudogene 25130298198130298740Rat
7649714LOC102550980uncharacterized LOC1025509805130311847130319039Rat
41199780LOC120103232U6 spliceosomal RNA5130338326130338430Rat
1310741Zswim5zinc finger, SWIM-type containing 55130346733130463791Rat
3946Uroduroporphyrinogen decarboxylase5130464695130468783Rat
1309823Hectd3HECT domain E3 ubiquitin protein ligase 35130469840130479802Rat
7638959LOC10255530740S ribosomal protein S12-like5130485611130486622Rat
620821Eif2b3eukaryotic translation initiation factor 2B subunit gamma5130492167130558692Rat
1309039Ptch2patched 25130571956130592506Rat
2320529Btbd19BTB domain containing 195130596966130605403Rat
1565942Dynlt4dynein light chain Tctex-type 45130605437130607224Rat
62039Plk3polo-like kinase 35130607142130612317Rat
1596200Best4bestrophin 45130622194130629045Rat
61910Rps8ribosomal protein S85130630362130632932Rat
41105011Snord38bsmall nucleolar RNA, C/D box 38B5130630642130630711Rat
41246695Snord38asmall nucleolar RNA, C/D box 38A5130631069130631136Rat
41375413Snord46small nucleolar RNA, C/D box 465130632015130632118Rat
41205584Snord55small nucleolar RNA, C/D box 555130632614130632692Rat
620239Kif2ckinesin family member 2C5130637347130662680Rat
41216010Trnaa-agc53transfer RNA alanine (anticodon AGC) 535130664760130664832Rat
41391363Rnu5f-1l1RNA, U5F small nuclear 1 like 15130667018130667133Rat
41150489LOC120103377U5 spliceosomal RNA5130673379130673494Rat
41012747LOC120103378U5 spliceosomal RNA5130680654130680769Rat
1563714Armh1armadillo-like helical domain containing 15130680955130722062Rat
1307066Tmem53transmembrane protein 535130721780130737692Rat
1598210Rnf220ring finger protein 2205130739173130961386Rat
1596047Rps13-ps2ribosomal protein S13, pseudogene 25130966577130967555Rat
1595859Eri3ERI1 exoribonuclease family member 35131016146131143347Rat
1311295Dmap1DNA methyltransferase 1-associated protein 15131143726131151760Rat
7691700LOC102553953uncharacterized LOC1025539535131201325131203990Rat
9186911Klf18lKruppel-like factor 18 like5131226565131228325Rat
1307711Klf17KLF transcription factor 175131293068131315878Rat
621243Slc6a9solute carrier family 6 member 95131374562131408733Rat
1562911Ccdc24coiled-coil domain containing 245131398766131412395Rat
41390291LOC120102957uncharacterized LOC1201029575131411481131417615Rat
1305358B4galt2beta-1,4-galactosyltransferase 25131412541131422573Rat
1308303Atp6v0bATPase H+ transporting V0 subunit B5131423384131424900Rat
1304634Dph2diphthamide biosynthesis 25131428434131431394Rat
620071Ipo13importin 135131433770131454044Rat
621427Artnartemin5131458596131470193Rat
68414St3gal3ST3 beta-galactoside alpha-2,3-sialyltransferase 35131470348131670794Rat
41129363LOC120102961uncharacterized LOC1201029615131488481131492415Rat
41119943LOC120102959uncharacterized LOC1201029595131567330131572307Rat
41337843LOC120102960uncharacterized LOC1201029605131587421131591432Rat
1306378Kdm4alysine demethylase 4A5131672754131719534Rat
3453Ptprfprotein tyrosine phosphatase, receptor type, F5131741959131824000Rat
7559302LOC102553423uncharacterized LOC1025534235131809376131814053Rat
1561416Hyihydroxypyruvate isomerase5131894575131897709Rat
1308616Szt2SZT2 subunit of KICSTOR complex5131897250131943953Rat
1305552Med8mediator complex subunit 85131948632131949516Rat
1587151Elovl1ELOVL fatty acid elongase 15131961478131965961Rat
620477Cdc20cell division cycle 205131966203131970406Rat
9354806LOC103692460uncharacterized LOC1036924605131970623131974793Rat
1311069MplMPL proto-oncogene, thrombopoietin receptor5131973895131987472Rat
41271559LOC120103206U6 spliceosomal RNA5131979522131979625Rat
7625538LOC102554074uncharacterized LOC1025540745131986391131999442Rat
621642Tie1tyrosine kinase with immunoglobulin-like and EGF-like domains 15132000013132019658Rat
1587100Tmem258l2transmembrane protein 258 like 25132041753132042174Rat
1587085Rps5-ps1ribosomal protein S5, pseudogene 15132042844132043482Rat
1305347C5h1orf210similar to human chromosome 1 open reading frame 2105132048755132051913Rat
1311937Tmem125transmembrane protein 1255132063162132064566Rat
1585948Cfap57cilia and flagella associated protein 575132074404132148102Rat
1305762Ebna1bp2EBNA1 binding protein 25132148164132152730Rat
11479750LOC108351020uncharacterized LOC1083510205132160198132164045Rat
1333931Or13p10olfactory receptor family 13 subfamily P member 105132186704132187651Rat
1332845Or13p9olfactory receptor family 13 subfamily P member 95132203917132204855Rat
1333749Or13p4olfactory receptor family 13 subfamily P member 45132216822132217769Rat
1333843Or13p3olfactory receptor family 13 subfamily P member 35132236461132237399Rat
1584354Or13p8bolfactory receptor family 13 subfamily P member 8B5132250763132255279Rat
1333211Or13p5olfactory receptor family 13 subfamily P member 55132261753132265386Rat
1333268Or10ak14bolfactory receptor family 10 subfamily AK member 14B5132271846132272793Rat
41245460LOC120093079olfactory receptor 2A12-like5132293815132294801Rat
1334007Or10ak14olfactory receptor family 10 subfamily AK member 145132312678132313619Rat
1584753Olfr1330-ps1olfactory receptor 1330, pseudogene 15132326454132327460Rat
1583684Or10ak11olfactory receptor family 10 subfamily AK member 115132345164132346165Rat
1333331Or10ak7bolfactory receptor family 5 subfamily AK member 7B5132373994132374941Rat
1332921Or10ak7folfactory receptor family 10 subfamily AK member 7F5132407421132408368Rat
1334318Or10ak13olfactory receptor family 10 subfamily AK member 135132435679132436626Rat
1333113Or10ak7eolfactory receptor family 10 subfamily AK member 7E5132462578132463525Rat
1332893Or10ak7olfactory receptor family 10 subfamily AK member 75132489097132490044Rat
1598117Mrs2-ps1magnesium transporter MRS2, pseudogene 15132496554132497918Rat
1334300Or10ak7d-ps1olfactory receptor family 10 subfamily AK member 7D, pseudogene 15132504419132505360Rat
1334256Or10ak7c-ps1olfactory receptor family 10 subfamily AK member 7C, pseudogene 15132519279132520219Rat
41360569Trnas-aga19transfer RNA serine (anticodon AGA) 195132530789132530871Rat
1333490Or10ak7g-ps1olfactory receptor family 10 subfamily AK member 7G, pseudogene 15132547785132548722Rat
1310787Lao1L-amino acid oxidase 15132573698132583591Rat
41378098LOC120103309small nucleolar RNA SNORA175132591434132591567Rat
6496493Ubb-ps1ubiquitin B, pseudogene 15132604603132605052Rat
11451090LOC108351140NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene5132695795132696187Rat
11512073LOC108351021uncharacterized LOC1083510215132706788132717161Rat
3704Slc2a1solute carrier family 2 member 15132717196132745416Rat
1308150Zfp691zinc finger protein 6915132780259132784954Rat
41031036LOC120102964uncharacterized LOC1201029645132783310132785888Rat
1309996Ermaperythroblast membrane associated protein (Scianna blood group)5132788847132803030Rat
1311232Svbpsmall vasohibin binding protein5132808021132813735Rat
1563015Tmem269transmembrane protein 2695132817324132836360Rat
1564804C5h1orf50similar to human chromosome 1 open reading frame 505132837135132841744Rat
628823P3h1prolyl 3-hydroxylase 15132841868132856664Rat
1305000Cldn19claudin 195132862939132870364Rat
61843Ybx1Y box binding protein 15132882137132898885Rat
1564921Ppihpeptidylprolyl isomerase H5132906324132924341Rat
1305604Ccdc30coiled-coil domain containing 305132926767133019635Rat
41262339Trnaa-agc98transfer RNA alanine (anticodon AGC) 985132993684132993764Rat
1311399Ppcsphosphopantothenoylcysteine synthetase5133023077133026899Rat
1307175Zmynd12zinc finger, MYND-type containing 125133026917133059985Rat
1306880Rimklaribosomal modification protein rimK-like family member A5133072179133098840Rat
1311770Foxj3forkhead box J35133140344133228489Rat
620240Rps27a-ps1ribosomal protein S27a, pseudogene 15133180227133180805Rat
2766Guca2aguanylate cyclase activator 2A5133237177133239019Rat
620044Guca2bguanylate cyclase activator 2B5133246891133248941Rat
1311252Hivep3HIVEP zinc finger 35133325327133727797Rat
41167248Pcgf6-ps1polycomb group ring finger 6, pseudogene 15133400653133401469Rat
1563049RGD1563049RGD15630495133468132133469525Rat
41141719LOC120102966uncharacterized LOC1201029665133567881133568432Rat
2533Edn2endothelin 25133751316133756814Rat
1595858Foxo6forkhead box O65133856087133876387Rat
1305788Scmh1Scm polycomb group protein homolog 15133991167134115893Rat
1564075Slfnl1schlafen-like 15134117634134122105Rat
1311060Ctps1CTP synthase 15134125022134154155Rat
620113Cited4Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 45134246936134247827Rat
61799Kcnq4potassium voltage-gated channel subfamily Q member 45134275145134326992Rat
41179363LOC120102968uncharacterized LOC1201029685134304633134310495Rat
41276989LOC120102969uncharacterized LOC1201029695134320925134321409Rat
3173Nfycnuclear transcription factor Y subunit gamma5134336802134405372Rat
2325590Mir30c1microRNA 30c-15134349237134349325Rat
2325460Mir30emicroRNA 30e5134352232134352323Rat
9288945LOC10369247760S ribosomal protein L34 pseudogene5134377624134404815Rat
11415394Rps29-ps10ribosomal protein S29, pseudogene 105134416881134417425Rat
628762Rims3regulating synaptic membrane exocytosis 35134429092134468935Rat
41206420LOC120103218U6 spliceosomal RNA5134473016134473116Rat
1309802Exo5exonuclease 55134494440134497757Rat
2322990Zfp69zinc finger protein 695134502002134516428Rat
1308418Smap2small ArfGAP25134530542134576938Rat
1588266Rpl10al3ribosomal protein L10A like 35134578540134579373Rat
1307029Col9a2collagen type IX alpha 2 chain5134607616134624678Rat
11357406LOC108351024uncharacterized LOC1083510245134618801134622353Rat
1305570Zmpste24zinc metallopeptidase STE245134627218134660360Rat
2321463Tmco2transmembrane and coiled-coil domains 25134664692134669291Rat
1305297RlfRLF zinc finger5134711612134767274Rat
41369998LOC120102971prothymosin alpha-like5134786829134787772Rat
7586067LOC102552595uncharacterized LOC1025525955134876093134877844Rat
41238809LOC120103098palmitoyl-protein thioesterase 1-like5135054717135063225Rat
1588191Twf1-ps1twinfilin actin-binding protein 1, pseudogene 15135068998135070109Rat
61994Ppt1palmitoyl-protein thioesterase 15135121164135142048Rat
41344223LOC120102972uncharacterized LOC1201029725135126397135136679Rat
620309Cap1cyclase associated actin cytoskeleton regulatory protein 15135142108135168885Rat
1310174Mfsd2aMFSD2 lysolipid transporter A, lysophospholipid5135225801135240744Rat
6503267LOC100909490uncharacterized LOC1009094905135234810135239773Rat
1588591MyclMYCL proto-oncogene, bHLH transcription factor5135274713135281584Rat
1304781Trit1tRNA isopentenyltransferase 15135293472135341522Rat
1591873Bmp8bbone morphogenetic protein 8b5135386058135411337Rat
1306953Oxct2b3-oxoacid CoA transferase 2B5135396632135398386Rat
1311411Ppiepeptidylprolyl isomerase E5135406172135419332Rat
41310032LOC120102973uncharacterized LOC1201029735135454202135456101Rat
708491Hpcal4hippocalcin-like 45135454477135466417Rat
1310908Nt5c1a5'-nucleotidase, cytosolic IA5135473107135494400Rat
1305022Heylhes-related family bHLH transcription factor with YRPW motif-like5135508160135525152Rat
11436064LOC108351027uncharacterized LOC1083510275135516106135522513Rat
1305015Pabpc4poly(A) binding protein, cytoplasmic 45135563142135578985Rat
41194760LOC120103283small nucleolar RNA SNORA555135571702135571833Rat
41053919LOC120103284small nucleolar RNA SNORA555135573359135573491Rat
1585858Bmp8abone morphogenetic protein 8a5135589839135617785Rat
2320924Oxct2a3-oxoacid CoA transferase 2A5135600812135602570Rat
41219069Rps14-ps5ribosomal protein S14, pseudogene 55135618647135621991Rat
1306057Macf1microtubule-actin crosslinking factor 15135623734135949097Rat
2320877Macf1l1microtubule-actin crosslinking factor 1 like 15135681076135685238Rat
41257289LOC120103187U6 spliceosomal RNA5135941294135941398Rat
11356951LOC10835110640S ribosomal protein S15a pseudogene5135950942135951496Rat
1311081Ndufs5NADH:ubiquinone oxidoreductase subunit S55135974029135979705Rat
1585989Akirin1akirin 15135989378136004782Rat
41305282LOC120103124uncharacterized LOC1201031245136005287136006293Rat
1308295Rhbdl2rhomboid like 25136037560136081970Rat
2320727MycbpMyc binding protein5136135955136143163Rat
1311760RragcRas-related GTP binding C5136148239136167773Rat
41250173LOC120102974uncharacterized LOC1201029745136193492136207992Rat
7515706Lnc081long non-coding RNA 0815136390882136392827Rat
11519497LOC108351142uncharacterized LOC1083511425136575295136577468Rat
40955061LOC120102975uncharacterized LOC1201029755136616942136628737Rat
41294688LOC120103175uncharacterized LOC1201031755136696341136697828Rat
7549432LOC102548116uncharacterized LOC1025481165136773468136910189Rat
619767Pou3f1POU class 3 homeobox 15136910391136913371Rat
621412Utp11UTP11, small subunit processome component5136931279136946164Rat
41113193LOC120103210U6 spliceosomal RNA5136950184136950283Rat
1307180Fhl3four and a half LIM domains 35136953947136961317Rat
1308726Sf3a3splicing factor 3a, subunit 35136967713136987345Rat
41292423LOC120102976uncharacterized LOC1201029765136995963136996788Rat
1311511Inpp5binositol polyphosphate-5-phosphatase B5136996766137061315Rat
1308956Mtf1metal-regulatory transcription factor 15137062319137107136Rat
1559909C5h1orf122similar to human chromosome 1 open reading frame 1225137109093137110130Rat
708492YrdcyrdC N(6)-threonylcarbamoyltransferase domain containing5137110244137115127Rat
1563973Manealmannosidase, endo-alpha-like5137115154137122299Rat
41384438Trnaa-agc89transfer RNA alanine (anticodon AGC) 895137132324137132398Rat
41279700LOC120102977glyceraldehyde-3-phosphate dehydrogenase-like5137133923137135490Rat
1562679Epha10EPH receptor A105137139588137175637Rat
41151543LOC120103229U6 spliceosomal RNA5137143686137143791Rat
1566306Cdca8cell division cycle associated 85137176414137198686Rat
1560436AirimAFG2 interacting ribosome maturation factor5137198688137205912Rat
1565558Rspo1R-spondin 15137251629137273273Rat
11478259LOC108351029uncharacterized LOC1083510295137276877137291647Rat
1305006Gnl2G protein nucleolar 25137293141137318528Rat
1309260Dnali1dynein, axonemal, light intermediate chain 15137318475137327313Rat
1359268Snip1Smad nuclear interacting protein 15137328371137335846Rat
1310440Meaf6MYST/Esa1-associated factor 65137344681137369703Rat
1306776Zc3h12azinc finger CCCH type containing 12A5137376562137385351Rat
41317252Trnap-agg51transfer RNA proline (anticodon AGG) 515137428054137428135Rat
41007268LOC120103126uncharacterized LOC1201031265137454504137462767Rat
41296900LOC120103362U2 spliceosomal RNA5137554592137554650Rat
41156617LOC120103127uncharacterized LOC1201031275137581226137669433Rat
41221114LOC120103128uncharacterized LOC1201031285137692387137696774Rat
41258504LOC120103129uncharacterized LOC1201031295137754470137755982Rat
71027Grik3glutamate ionotropic receptor kainate type subunit 35137767865137989617Rat
11386181LOC108351031uncharacterized LOC1083510315137775733137793466Rat
9272641LOC103692478ATP synthase subunit g, mitochondrial pseudogene5138093862138095869Rat
2323884Hsp90aa1-ps17heat shock protein 90 alpha family class A member 1, pseudogene 175138131979138133313Rat
11463961LOC108351107U1 small nuclear ribonucleoprotein C pseudogene5138156631138160516Rat
41325539LOC120103333U2 spliceosomal RNA5138177540138177706Rat
1588589Cct7-ps2chaperonin containing Tcp1, subunit 7 (eta), pseudogene 25138230208138231927Rat
1584842Ywhaq-ps5tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta, pseudogene 55138234322138235361Rat
1309114Csf3rcolony stimulating factor 3 receptor5138298605138318224Rat
1359675Mrps15mitochondrial ribosomal protein S155138321610138332205Rat
1306596Oscp1organic solute carrier partner 15138334552138365220Rat
6490698Rps14-ps7ribosomal protein S14, pseudogene 75138350191138350766Rat
1584914Lsm10LSM10, U7 small nuclear RNA associated5138365983138375856Rat
727884Stk40serine/threonine kinase 405138380049138417802Rat
11444382LOC108351032uncharacterized LOC1083510325138420455138426958Rat
1308876Eva1beva-1 homolog B5138427088138429602Rat
1305090Sh3d21SH3 domain containing 215138429180138444540Rat
1306129Thrap3thyroid hormone receptor associated protein 35138445284138487544Rat
41404263LOC120103176uncharacterized LOC1201031765138511449138512724Rat
1597986Map7d1MAP7 domain containing 15138527944138552537Rat
1309135Trappc3trafficking protein particle complex subunit 35138559238138572825Rat
1305182Col8a2collagen type VIII alpha 2 chain5138586201138613627Rat
1309068AdprsADP-ribosylserine hydrolase5138614022138619296Rat
1311065Tekt2tektin 25138619665138623301Rat
41251231LOC120102978uncharacterized LOC1201029785138623438138630836Rat
1309163Ago3argonaute RISC catalytic component 35138632367138714230Rat
1304619Ago1argonaute RISC component 15138722111138757118Rat
1304583Ago4argonaute RISC component 45138780446138825898Rat
41292687LOC120103100atherin-like5138825514138826986Rat
1309083Clspnclaspin5138850119138885037Rat
1563072C5h1orf216similar to human chromosome 1 open reading frame 2165138900045138905267Rat
41247707LOC120102980uncharacterized LOC1201029805138959115138985806Rat
61874Psmb2proteasome 20S subunit beta 25138970564139002715Rat
1563297Tfap2etranscription factor AP-2 epsilon5139009447139030695Rat
621734Ncdnneurochondrin5139037807139047645Rat
2306719Kiaa0319lKIAA0319 like5139047847139140709Rat
41164338LOC120103305small nucleolar RNA SNORA175139108038139108168Rat
40938313LOC120103340small nucleolar RNA SNORA175139145804139145928Rat
1309545Zmym4zinc finger MYM-type containing 45139146782139264387Rat
41326168Rpl35a-ps5ribosomal protein L35A, pseudogene 55139194053139194421Rat
11515846LOC108351035uncharacterized LOC1083510355139264423139274283Rat
1592647Tuba1b-ps13tubulin, alpha 1B, pseudogene 135139285051139286280Rat
1592632Rps11-ps5ribosomal protein S11, pseudogene 55139288466139289140Rat
41210519Trnal-aag18transfer RNA leucine (anticodon AAG) 185139325993139326073Rat
40992504Rpl37a-ps1ribosomal protein L37A, pseudogene 15139329380139329750Rat
727923Sfpqsplicing factor proline and glutamine rich5139338034139353476Rat
41095357Cdc42se1-ps1CDC42 small effector 1, pseudogene 15139362311139364531Rat
1307027Zmym1zinc finger MYM-type containing 15139364788139381883Rat
41211224Trnap-agg22transfer RNA proline (anticodon AGG) 225139379501139379581Rat
1561833Zmym6zinc finger MYM-type containing 65139396374139444357Rat
2319741Tmem35btransmembrane protein 35B5139446317139449947Rat
708349Dlgap3DLG associated protein 35139491972139562625Rat
1591379Smim12small integral membrane protein 125139569367139573276Rat
40992020Rnu6-260RNA, U6 small nuclear 2605139610750139610852Rat
2691Gja4gap junction protein, alpha 45139633324139635857Rat
2695Gjb3gap junction protein, beta 35139649227139654970Rat
621829Gjb4gap junction protein, beta 45139675776139679551Rat
2696Gjb5gap junction protein, beta 55139680670139683588Rat
11473258LOC108351036uncharacterized LOC1083510365139878306139886024Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10453D5Mcw15128924597128924722Ratregion
10453D5Mcw15129098900129099033Ratregion
10454D5Wox121185128924607128924723Ratregion
10454D5Wox121185129098910129099034Ratregion
34220D5Mgh131485133529271133529419Ratregion
34441D5Mgh202225133916727133916949Ratregion
34581D5Mgh272285129132447129132675Ratregion
34583D5Rjr11745129132428129132602Ratregion
34603D5Mit192055133752562133752767Ratregion
34706D5Mgh181075134972873134972980Ratregion
11303D5Wox111285132743341132743469Ratregion
11304D5Arb72325132744136132744368Ratregion
33680D5Mit132045131345754131345958Ratregion
33731D5Mit141735131378081131378254Ratregion
33741D15Mit42015138493166138493249Ratregion
33741D15Mit42015138497366138497449Ratregion
33741D15Mit42015138501566138501649Ratregion
33741D15Mit42015138505766138505849Ratregion
36103D5Rat362165138113556138113774Ratregion
36187D5Rat301625128499722128499884Ratregion
37362D5Rat862335133749410133749643Ratregion
37418D17Rat731995134532613134532812Ratregion
37462D5Rat622065136731316136731522Ratregion
35352D5Rat331135136479578136479691Ratregion
35370D5Rat344085136863803136864211Ratregion
36677D5Rat311745133011384133011550Ratregion
36711D5Rat321595132686313132686472Ratregion
35060D5Rat291685129406121129406289Ratregion
35641D5Rat551515133752611133752762Ratregion
39606D5Rat1642125128477950128478162Ratregion
39640D5Rat1842335137623726137623959Ratregion
39958D5Rat1691945134439349134439543Ratregion
38338D5Rat1081855128033842128034027Ratregion
38510D5Rat632145139989554139989768Ratregion
40018D5Rat1652035127746389127746592Ratregion
40174D5Rat1701665137961769137961935Ratregion
38828D5Rat902035132691196132691399Ratregion
39352D5Rat872435132649285132649528Ratregion
39372D5Rat2022455133529288133529533Ratregion
42756D5Rat2611835129410089129410272Ratregion
42757D5Rat2351935129441624129441817Ratregion
41288D5Rat1661715130881210130881381Ratregion
41388D5Rat1671325131581900131582032Ratregion
41448D5Rat1681815131837785131837966Ratregion
41630D5Rat1991115129390389129390500Ratregion
41686D5Rat2012165129712378129712586Ratregion
41704D5Rat2002005129140953129141153Ratregion
43137D19Rat1031495139780068139780099Ratregion
44552D9Wox211365126986761126986815Ratregion
43885D5Got751735139467951139468122Ratregion
43889D5Got741965138771525138771721Ratregion
43962D5Got501305128398386128398516Ratregion
43964D5Got572115128486224128486435Ratregion
43967D5Got552305129379994129380224Ratregion
43968D5Got591785131352850131353030Ratregion
43969D5Got583125132081000132081312Ratregion
43970D5Got612795132914427132914706Ratregion
43971D5Got561905131284754131284944Ratregion
43972D5Got601955133114545133114740Ratregion
43974D5Got701825134219040134219222Ratregion
43976D5Got732005138024763138024963Ratregion
43977D5Got712635133889376133889700Ratregion
43977D5Got712635133889437133889700Ratregion
43978D5Got631705136407046136407216Ratregion
43980D5Got651505136680042136680192Ratregion
43981D5Got671515136895401136895552Ratregion
43982D5Got691565136586248136586405Ratregion
43983D5Got682345136456175136456409Ratregion
43984D5Got661715136586193136586364Ratregion
43985D5Got621945137277732137277926Ratregion
43986D5Got641405134589875134590015Ratregion
60490D5Got512285128579225128579453Ratregion
60491D5Got521805130517403130517585Ratregion
69509D5Uwm591885131830143131830331Ratregion
69559D5Uwm532135136036410136036621Ratregion
69561D5Uwm352395128627218128627457Ratregion
69569D5Uwm381885132207401132207589Ratregion
62498D5Uia42465137790781137791027Ratregion
62510D5Uia62425137790781137791023Ratregion
62515D5Uia71345138188052138188186Ratregion
66424D5Mco73265129320195129320521Ratregion
66446D5Uia131895136790515136790705Ratregion
67778D5Uwm42065134844314134844524Ratregion
1631411D5Wox401715131965869131966040Ratregion
1626849Ppt2055135141351135141556Ratregion
1627004Glur72625137983408137983670Ratregion
1627083Ugn8445133246937133247781Ratregion
1628544D5Wox281545131392020131392174Ratregion
1629580D5Got2681155136574055136574170Ratregion
1638974D5Got3072305134518868134519098Ratregion
1633333D5Wox292225131372552131372774Ratregion
1635260D5Got2701285133649747133649875Ratregion
1635768D5Cebr21215133953212133953333Ratregion
1634146D5Got2641575138010582138010739Ratregion
7205944Pou3f14005136911196136911596Ratregion
7365009rs10583564305128071929128071929Ratregion
7365011rs1345215505131443083131443083Ratregion
7365013rs10512711105133403440133403440Ratregion
7365016rs10680819305134724733134724733Ratregion
7365017rs1345061005133072688133072688Ratregion
7206462Slc5a97335126709844126710577Ratregion
5038628AA414954805129772164129772244Ratregion
5038630AW8220002515130479423130479674Ratregion
5038820RH1273511845138572406138572591Ratregion
5036121Col9a21895134623139134623328Ratregion
7206600Foxd29435128428216128429159Ratregion
7206602Foxe33905128445627128446017Ratregion
7206620Pou3f12235136910376136910599Ratregion
7206636Slc2a105132743856132745113Ratregion
5039166RH1275502095135141796135142005Ratregion
5036398Lmyc13825135279579135279961Ratregion
5039030RH1274722185129575169129575387Ratregion
5039048RH1274832135134336973134337186Ratregion
5036895AU0495451565125864606125864762Ratregion
5037059A001T471055135578722135578827Ratregion
5037059A001T471055135578722135578827Ratregion
5037105SHGC-746381655135623891135624057Ratregion
5035723A009G051595134711704134711863Ratregion
5026074RH1308091925131741998131742190Ratregion
5026090RH1308731915135466053135466244Ratregion
5026096RH1308952055139680891139681096Ratregion
5031438AU0483261585137302148137302306Ratregion
5026228RH1314061865131423416131423602Ratregion
5028767RH1422541665133228199133228365Ratregion
5028797RH1423631505136167464136167614Ratregion
5028811RH1424181835135141673135141856Ratregion
5028813RH1424277215133238070133238791Ratregion
5028875RH1426571995134149908134150107Ratregion
5028895RH1427312335130721158130721391Ratregion
5034303UniSTS:2260493675139633824139634191Ratregion
5029173RH1437931425134246913134247055Ratregion
5034552BE1194261795131409081131409260Ratregion
5032097RH943921745139633329139633503Ratregion
5026786RH1335232025128158643128158846Ratregion
5026820RH1336561815138445314138445495Ratregion
5032263AI8511621285132813332132813460Ratregion
5032363AI8465701395135466252135466391Ratregion
5035118AW5331891785135405160135405338Ratregion
5026956RH1341762725131896955131897227Ratregion
5029627BE1017482055130462668130462873Ratregion
5029633BF3864182095131121135131121346Ratregion
5027199AI4296181455136879369136879515Ratregion
5029811BE1028271775131693813131693990Ratregion
5034940AI1716761325136961140136961272Ratregion
5027261AI5056521465127378841127378987Ratregion
5027275AW5521321015136142490136142591Ratregion
5027421AI988026905127469769127469859Ratregion
5029975BF4002872045135239524135239728Ratregion
5032841RH1366892085136142395136142603Ratregion
5027591BB151133925131965773131965865Ratregion
5030111BE1104471715129614175129614346Ratregion
5032951RH1370783205132152339132152659Ratregion
5032971RH1371552165133139331133139547Ratregion
5024994RH1268831945138417353138417547Ratregion
5025058BB3203611325134716087134716219Ratregion
5030255BE1115832155132497971132498186Ratregion
5030329BE1058591895130927292130927478Ratregion
5033035RH1373501835134530651134530834Ratregion
5033057RH1374321935138630897138631090Ratregion
5033083RH1375291285132837190132837318Ratregion
5033085RH1375351535135517542135517695Ratregion
5030423BF3975092135135950525135950738Ratregion
5025308RH1278202135135989348135989561Ratregion
502792334.MMHAP10FRD10.seq1085137140800137140908Ratregion
502793936.MMHAP9FRD12.seq1745129625990129626164Ratregion
502795542.MMHAP10FF6.seq1805126675705126675885Ratregion
5030815BE1203221855131139870131140055Ratregion
5033563RH1392821225129771669129771791Ratregion
5025654RH1291462005129137262129137462Ratregion
5025658RH1291631925130607151130607343Ratregion
5025720RH1293981955139347448139347643Ratregion
5031055BE1153201545135398167135398321Ratregion
5031055BE1153201545135398167135398321Ratregion
5031055BE1153201545135600876135601030Ratregion
5031055BE1153201545135600876135601030Ratregion
5031201RH1031181645137989328137989492Ratregion
5051993RH947772215132711415132711636Ratregion
5054871RH1434731775131405819131405996Ratregion
5054881RH1434782675132061987132062254Ratregion
5055997RH1441232255133469099133469324Ratregion
5056831RH1446051615134121875134122036Ratregion
5054295RH1431421015135516105135516206Ratregion
5057466AA8587402145135623979135624193Ratregion
5057490BG375960905126709807126709897Ratregion
5055199RH1436631755139351220139351395Ratregion
5057800BE1015701535133074366133074519Ratregion
5057948BE1017101565137371420137371576Ratregion
5056241RH1442651245129700290129700414Ratregion
5056275RH1442841355130052194130052329Ratregion
5058854BF3871872065131813851131814057Ratregion
5056167RH1442222185136104100136104318Ratregion
5056837RH1446091535134734490134734643Ratregion
5055409RH1437851875135280552135280739Ratregion
5058906BF3872161695131971506131971675Ratregion
5058922BF3872501965135239532135239728Ratregion
5055537RH1438582215135280845135281066Ratregion
5055691RH1439471345131897304131897438Ratregion
5055721RH1439642285139885093139885321Ratregion
5052913RH1423461645138375583138375747Ratregion
5053015RH1424051635138780656138780819Ratregion
5053067RH1424342155133750605133750820Ratregion
5058420AI5550861845139449681139449865Ratregion
5058472BE0962161695132870208132870377Ratregion
5050454RH1340651905139633369139634557Ratregion
5053899RH1429151465134542479134542625Ratregion
5049900RH1337462025139407025139407063Ratregion
5050138RH1338841835135888620135888807Ratregion
5054093RH1430261155132843041132843156Ratregion
5050472RH1340762175132748041132748258Ratregion
5052927RH1423541605132837594132837754Ratregion
5053085RH1424451825139674889139675071Ratregion
5053341RH1425923835139353065139353448Ratregion
5054553RH1432911075135069070135069177Ratregion
5054633RH1433361435135523274135523417Ratregion
5051096RH1344372195130000581130000800Ratregion
5040696RH1284316835136166953136167636Ratregion
5040918RH1285581865134247827134248013Ratregion
5043428RH1300201805130478299130478479Ratregion
5043492RH1300562025139649265139649467Ratregion
5044416RH1305902175135989537135989754Ratregion
5041262RH1287563665138330482138330848Ratregion
5041284RH1287681505130270351130270501Ratregion
5044014RH1303611855137064835137065020Ratregion
5044026RH1303672165129314837129315053Ratregion
5044184RH1304582175134448863134449080Ratregion
5046088RH1315518955128217728128218623Ratregion
5046252RH1316461925135624798135624990Ratregion
5044374RH1305661955129772352129772547Ratregion
5044428RH1305972105129290909129291119Ratregion
5045532RH1312322155134574373134574588Ratregion
5045556RH1312451985138629631138629829Ratregion
5046172RH1316001805128923713128923893Ratregion
5046172RH1316001805129010601129010781Ratregion
5046172RH1316001805129098021129098201Ratregion
5047628RH1324372205129513373129513593Ratregion
5048940RH1331941855133072268133072453Ratregion
5048978RH1332162155134376860134377075Ratregion
5047760RH1325131865135494167135494353Ratregion
5049190RH1333371835136692262136692445Ratregion
5049262RH1333791885134694422134694610Ratregion
5046646RH1318731825139196992139197174Ratregion
5046706RH1319081825135988650135988832Ratregion
5046814RH1319701825129480995129481177Ratregion
5046824RH1319752085139221340139221548Ratregion
5046824RH1319752085139221340139221548Ratregion
5047136RH1321541835137109015137109198Ratregion
5039380RH1276721925138614123138614315Ratregion
5039500RH1277412205138366350138366570Ratregion
5048362RH1328601955130004946130005141Ratregion
5042526RH1294881655128600753128600918Ratregion
5049612RH1335812025129480048129480250Ratregion
5042816RH1296621925137318528137318720Ratregion
5039486RH1277331855132051511132051696Ratregion
5040600RH1283761825130056344130056526Ratregion
5043220RH1299011885138612524138612712Ratregion
5043224RH1299032055129293297129293502Ratregion
5042454RH1294432105139357732139357942Ratregion
5040660RH1284101955135590547135590742Ratregion
5040722RH1284462155133023188133023403Ratregion
7192216Slc2a17645132740566132741330Ratregion
5040276RH1281902055139147272139147477Ratregion
5040302RH1282051805131142912131143092Ratregion
7193012D4Mit111235135507899135508022Ratregion
5043010RH1297771835129546053129546236Ratregion
5075004RH1383431525132912194132912346Ratregion
5075212RH1384642145135341177135341391Ratregion
5074000RH1377612445138141770138142014Ratregion
5074068RH1378001215131696381131696502Ratregion
5075586RH1386791255129647117129647242Ratregion
5075856RH1388362065130210479130210685Ratregion
5072280RH1367581835130720595130720778Ratregion
5072788RH1370531805135338549135338729Ratregion
5074442RH1380191355138429242138429377Ratregion
5076002RH1389202185127376448127376666Ratregion
5076180RH1390261315129999661129999792Ratregion
5076214RH1390451845131742936131743120Ratregion
5079408RH1409782195138375398138375617Ratregion
5079452RH1410062055139140311139140516Ratregion
5076688RH1393211545131470364131470518Ratregion
5079644RH1411211985138428092138428290Ratregion
5076534RH1392312185139344263139344481Ratregion
5078126RH1401581835129999771129999954Ratregion
5079828RH1412262705131433780131434048Ratregion
5079880RH1412561865137335457137335643Ratregion
5079880RH1412561865137335457137335643Ratregion
5078610RH1404432095135434675135434884Ratregion
5080070RH1413651865129776379129776565Ratregion
5078314RH1402692035128515849128516052Ratregion
5072984RH1371672205130286628130286848Ratregion
5073036RH1371972055135406271135406476Ratregion
5080238RH1414652035134498527134498730Ratregion
5080292RH1414952065137368037137368243Ratregion
5071048RH1348561975135364537135364734Ratregion
5071168RH1349261955134494522134494717Ratregion
5080424RH1415711895128932273128932462Ratregion
5080424RH1415711895129019159129019348Ratregion
5080424RH1415711895129113516129113665Ratregion
5080526RH1416301705130285035130286093Ratregion
5072970RH1371591515129139100129139251Ratregion
5072994RH1371732025138904953138905155Ratregion
5073012RH1371832505128573362128573612Ratregion
5073044RH1372021885134624378134624566Ratregion
5071786RH1352832095129774636129774845Ratregion
5073830RH1376631625137144350137144512Ratregion
5073336RH1373771855132000011132000196Ratregion
5071828RH1353082155134628889134629104Ratregion
5071856RH1353242005137377907137378107Ratregion
5071238RH1349672195137175350137175569Ratregion
5071374RH1350451815128702633128702814Ratregion
5071688RH1352272175130465465130465682Ratregion
5063320BF3987721205126296801126296921Ratregion
5063384BF3988351605130463311130463471Ratregion
5064962BE1087731785129547404129547582Ratregion
5066702AU0482011415126673606126673747Ratregion
5066760AU0481672155129866293129866508Ratregion
5066878AU0480972245131081556131081780Ratregion
5067068AU0479841315128425977128426108Ratregion
5067150AU04786305139780068139780099Ratregion
5067240AU0478761815137536771137536952Ratregion
5067324AU0478251625138250874138251038Ratregion
5068370AU0471871485130352168130352316Ratregion
5070017RH944201605133238841133239001Ratregion
5069420AU0465121895139084910139085099Ratregion
5069498AU0464562075136689011136689213Ratregion
5070490Prdx1705130154646130156228Ratregion
5070490Prdx1705130156177130156228Ratregion
5070520RH1269272215139346949139347170Ratregion
5060354AW5315161835138637864138638047Ratregion
5063616BE1078491505135221060135221210Ratregion
5065200BE1211451905130827004130827194Ratregion
5065388AA9240882145134115585134115799Ratregion
5060370AW5318461745130057396130057570Ratregion
5060504BE1102361525126206402126206554Ratregion
5063806AW5352631595139573906139574065Ratregion
5062666BF4037241075130477886130477993Ratregion
5064134BE1206461535136066162136066315Ratregion
5064226BE1142181865137115820137116006Ratregion
5060246BG3781181805135524668135524848Ratregion
5061928AW5276191905137462533137462723Ratregion
5063684BE1079671735129619479129619652Ratregion
5060482BE1102001525133725776133725928Ratregion
5063866BE1201091515129218313129218464Ratregion
5066046BI3041561875130288704130288891Ratregion
5062958BI3010141535129339283129339435Ratregion
5064566BE1081241845132061064132061248Ratregion
5066152BF4136511295138750307138750436Ratregion
5061442BI287361915138969972138970063Ratregion
5063232BF4105401635131666124131666287Ratregion
5063254BF4040321525135239268135239420Ratregion
5064904BF4052631345130479505130479639Ratregion
5061642BF3969601835132890613132890796Ratregion
5084260AI1692341875136144576136144763Ratregion
5086247AA9570481845130270585130270769Ratregion
5086295BQ2054791905131671841131672031Ratregion
5082497BF4161251045129533011129533115Ratregion
5087221AW5307261595139553665139553824Ratregion
5087275AA8518801915135142185135142377Ratregion
5088098Slc2a11925132744921132745113Ratregion
5089795AU0493682485132207978132208226Ratregion
5087887Glyt12065131408382131408588Ratregion
5087964Inpp5b1735137045591137045764Ratregion
5089063AU0489332005130620272130620472Ratregion
5089427AU0491501185135287060135287178Ratregion
5089441AU0491581925130216523130216715Ratregion
5089549AU0492212225130432062130433042Ratregion
5083833AA8930112345128702186128702420Ratregion
5088601AU0486671975130620275130620472Ratregion
5088733AU0487472995131352840131353141Ratregion
5089697AU0493092335129454661129454896Ratregion
5089737AU0493331305126296934126297064Ratregion
5084038AA9434401925131399543131399735Ratregion
5084072AI1754771045134627279134627383Ratregion
5084090AI4083541215138374298138374419Ratregion
5081655BF4144421215139110739139110860Ratregion
5084426AI1695731005131586261131586361Ratregion
5084452AA9461101735138317575138317748Ratregion
5090011AU0494971465139714531139714677Ratregion
5090031AU0495092075125981263125981470Ratregion
5085044AI2376341365128337806128337942Ratregion
5090703AU0499101935126386545126386738Ratregion
5081018RH1419171805131408476131408656Ratregion
5089091AU0489491335134589882134590015Ratregion
5085896AW5358801615128562572128562733Ratregion
5080788RH1417822045130166555130166759Ratregion
5080824RH1418041805130637485130637665Ratregion
5082959BF3904891705129223605129223775Ratregion
5081250RH1420521935129509694129509887Ratregion
5081340Gjb405139676047139676083Ratregion
5084856AI2359971135129610874129610987Ratregion
5084942AA9633881545131965784131965938Ratregion
5083313BF4176501155130427355130427470Ratregion
5086543BQ1930411635135808810135808973Ratregion
5081537BE1172641815128592686128592867Ratregion
5085169BM3898241775139009637139009814Ratregion
5085625BM3906311845137688172137688356Ratregion
5083527BE1004381675135521935135522102Ratregion
5081693BF4081661205134208718134208838Ratregion
5083737AA8012602285138417574138417802Ratregion
5135467D5Uwm711465126673617126673763Ratregion
5502701C1orf1651175126329451126329568Ratregion
5503256UniSTS:23755610885130645951130647039Ratregion
5507559RH6804310385136368334136369629Ratregion
5502971Kcnq41325134276854134276986Ratregion
5504068px-5c81565125426959125427115Ratregion
5503855UniSTS:4728555525139650209139650761Ratregion
5504232RH800012005135989405135989605Ratregion
5505042Mpl8625131985255131986117Ratregion
5505438Lepre13985132856190132856588Ratregion
5504414PMC197251P23265139634422139634748Ratregion
5505578UniSTS:48497605136910380136911868Ratregion
5505686UniSTS:4893139545132254325132255279Ratregion
5505816UniSTS:49549405136910344136911861Ratregion
5505949UniSTS:49664510255135595728135596753Ratregion
5505984Pou3f1915136911338136911429Ratregion
5505921UniSTS:496549945131966929131967934Ratregion
5506177UniSTS:498727675132005377132005444Ratregion
5506173UniSTS:49860210465137271406137272452Ratregion
5506443UniSTS:47931716815137896104137897785Ratregion
5507051UniSTS:2242541545135502643135502797Ratregion
5507013fj50d02.y12385131745458131745796Ratregion
5507059UniSTS:2242831045131423456131423560Ratregion
5507203UniSTS:2252581685135279861135280029Ratregion
5507169UniSTS:2249081775131743133131743310Ratregion
5499675MARC_7377-7378:992008389:13855129639150129639535Ratregion
5499861UniSTS:2350281495139139827139139975Ratregion
5499849UniSTS:2350241765138365001138365177Ratregion
5499853UniSTS:2350272185138416435138416653Ratregion
5500951MARC_9759-9760:996688576:13095138350339138350648Ratregion
5500276D11S40661285137989446137989574Ratregion
5499847UniSTS:2350162235133225840133226063Ratregion
5500151UniSTS:2371692805135143159135144585Ratregion
5500172D4Mit2217625135585160135585922Ratregion
5499855UniSTS:235030995138528269138528368Ratregion
5499857UniSTS:2350312315139442883139443114Ratregion
5499915UniSTS:2354822075138231597138231774Ratregion
5500599RH1361509705130058470130059440Ratregion
5500879STS-Z403178895136949122136950011Ratregion
5505146Tekt22535138621900138622153Ratregion
5501816MARC_13905-13906:1007570719:16495130471126130471775Ratregion
5505616UniSTS:48571605136910345136911864Ratregion
5505812UniSTS:49540514285131693710131695138Ratregion
5502172MARC_7381-7382:996687840:1985129484171129485414Ratregion
5502174MARC_7369-7370:996687826:16505131416164131416814Ratregion
5501980MARC_21798-21799:1025034200:13165130267477130267793Ratregion
5501998MARC_23422-23423:1025023955:36175130586175130586792Ratregion
6480632D5Uwm741575127833594127833751Ratregion
11528623rs1056922315126768268126768268Ratregion
Position Markers

Flank 1: (D5Rat148)
Rat AssemblyChrPosition (strand)Source
Rnor_5.0592,225,721 - 92,225,914NCBI
RGSC_v3.4589,261,341 - 89,261,520UniSTS
RGSC_v3.1589,253,932 - 89,254,341RGD
RH 3.4 Map5656.9RGD
RH 3.4 Map5656.9UniSTS
SHRSP x BN Map550.2799RGD
SHRSP x BN Map550.2799UniSTS
Peak: (D5Rat90)
Rat AssemblyChrPosition (strand)Source
GRCr85137,976,520 - 137,976,723 (+)Marker Load Pipeline
mRatBN7.25132,691,196 - 132,691,399 (+)MAPPER
Rnor_6.05138,128,680 - 138,128,882NCBI
Rnor_5.05141,938,106 - 141,938,308UniSTS
RGSC_v3.45139,664,297 - 139,664,499UniSTS
RGSC_v3.45139,664,296 - 139,664,499RGD
RGSC_v3.15139,669,523 - 139,669,725RGD
Celera5131,218,061 - 131,218,263UniSTS
RH 3.4 Map5868.7RGD
RH 3.4 Map5868.7UniSTS
RH 2.0 Map5859.0RGD
SHRSP x BN Map570.6499RGD
FHH x ACI Map569.91RGD
Flank 2: (D5Rat63)
Rat AssemblyChrPosition (strand)Source
GRCr85145,274,041 - 145,274,255 (+)Marker Load Pipeline
mRatBN7.25139,989,554 - 139,989,768 (+)MAPPER
Rnor_6.05145,726,049 - 145,726,262NCBI
Rnor_5.05149,494,416 - 149,494,629UniSTS
RGSC_v3.45147,065,698 - 147,065,912RGD
RGSC_v3.45147,065,699 - 147,065,912UniSTS
RGSC_v3.15147,075,738 - 147,075,951RGD
Celera5138,484,465 - 138,484,667UniSTS
RH 3.4 Map5936.6UniSTS
RH 3.4 Map5936.6RGD
RH 2.0 Map5152.9RGD
SHRSP x BN Map578.5699RGD


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5111416838156416838Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5135927956166875058Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5135929696166875058Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5125392826139989768Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5129132447151006154Rat
1582230Bw78Body weight QTL 783.20.0016epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)5119085612128034027Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5131345754166875058Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5127798274166875058Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5106906205151906205Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)597570330136479578Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)587468046132468046Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5128506074166875058Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)5108938288153938288Rat
11528624Bss114Bone structure and strength QTL 1146.543e-07femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5124399325126768268Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5105999803150999803Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5120740824151018848Rat
1358909Kidm25Kidney mass QTL 251.87kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)590067849128034027Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)5103689353148689353Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5106906205151906205Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5111416838156416838Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5106906205151906205Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5111416838156416838Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)584132602129132602Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5108845856153845856Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)558829236128034027Rat
1358889Bp261Blood pressure QTL 2612.86arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)590067849128034027Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)597059760147465714Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
7365049Bp359Blood pressure QTL 359arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128071929134724733Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5129132428143070159Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5106906205151906205Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5106906205151906205Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5132717196165560427Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5121846814166846814Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5128033842133011550Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5120740824143608494Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5124160767133749643Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5108845856153845856Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat
631527Tls1T-lymphoma susceptibility QTL 100.001thymus integrity trait (VT:0010555)post-insult time to onset of T-cell lymphoma (CMO:0001907)590450144135450144Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5111416838156416838Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)569540295151018848Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5127798274166875058Rat
7411722Strs6Sensitivity to stroke QTL 63.9cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)5134972980138113556Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)587765973132765973Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)599216724148607142Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Wbc1

RGD Curation Notes
Note Type Note Reference
qtl_general additional information, including phenotype and mapping information, can be found at Genomic Map of Cardiovascular Phenotypes 727992
qtl_general white blood cell count was significant in SS strain when compared with BN strain (SCOR125) 727992