Cm66 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Cm66 (Cardiac mass QTL 66) Rattus norvegicus

Symbol: Cm66
Name: Cardiac mass QTL 66
RGD ID: 1598859
Previously known as: RHW-f3
Trait: heart mass   (VT:0007028)    
Measurement Type: heart weight to body weight ratio   (CMO:0000074)    
LOD Score: 2.0
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2579,584,860 - 124,584,860RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0583,424,556 - 128,424,556RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0587,410,667 - 132,410,667RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4584,392,127 - 129,392,127RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.1584,397,353 - 129,397,353RGD
Cross Type: intercross
Strains Crossed: SR/JrHsd SS/JrHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait
heart mass  (IDA)

Rat Strain
SR/JrHsd  (IEA)
SS/JrHsd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Sex-specific QTLs and interacting loci underlie salt-sensitive hypertension and target organ complications in Dahl S/jrHS hypertensive rats. Herrera VL, etal., Physiol Genomics. 2006 Aug 16;26(3):172-9. Epub 2006 May 23.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2320342Astn2astrotactin 257875814279744021Rat
41173321H2az2-ps2H2A.Z variant histone 2, pseudogene 257972162879721952Rat
3870Tlr4toll-like receptor 458014586780159501Rat
41095319LOC120103275small nucleolar RNA SNORA4458024866580248782Rat
41251418LOC120103186U6 spliceosomal RNA58035941580359521Rat
1593269Rpl13-ps6ribosomal protein L13, pseudogene 658078316180783785Rat
1561195Rpl31-ps11ribosomal protein L31, pseudogene 1158108325981083651Rat
1597387Cyc1-ps1cytochrome c-1, pseudogene 158113645281138332Rat
2318318Tra2b-ps4transformer 2 beta, pseudogene 458161556381658762Rat
1583726Hspa8-ps11heat shock protein family A (Hsp70) member 8, pseudogene 1158201034882012966Rat
11518618LOC108351129uncharacterized LOC10835112958218638382197382Rat
708519Brinp1BMP/retinoic acid inducible neural specific 158234850182550506Rat
11361552LOC108350985uncharacterized LOC10835098558255050182595277Rat
40998207LOC120102898uncharacterized LOC12010289858261444582621071Rat
41071177LOC120103201U6 spliceosomal RNA58269977582699881Rat
2318120Chac2-ps4ChaC glutathione specific gamma-glutamylcyclotransferase 2, pseudogene 458285086782862378Rat
41330673LOC120102899uncharacterized LOC12010289958352735783609586Rat
708451Cdk5rap2CDK5 regulatory subunit associated protein 258379228283961129Rat
41186256LOC120102900uncharacterized LOC12010290058396088483976651Rat
1308330Megf9multiple EGF-like-domains 958399356584105622Rat
9685074Mir3084cmicroRNA 3084c58417737584177443Rat
2324484Sppl3-ps1signal peptide peptidase like 3, pseudogene 158426997084278377Rat
1585621Rgccl1regulator of cell cycle like 158428089784281785Rat
9106595LOC103692379small ubiquitin-related modifier 3 pseudogene58527277285273104Rat
6491129Slc25a4-ps1solute carrier family 25 member 4, pseudogene 158540968985410315Rat
41169748LOC120103074uncharacterized LOC12010307458543843585440033Rat
11383413LOC108351095serine/arginine repetitive matrix protein 1-like58544262085444118Rat
413197023110040M04Rikl6RIKEN cDNA 3110040M04 gene like 658544663085448161Rat
409444813110040M04Rikl3RIKEN cDNA 3110040M04 gene like 358545186285453391Rat
41198326LOC120103077uncharacterized LOC12010307758545591285457437Rat
412384113110040M04Rikl4RIKEN cDNA 3110040M04 gene like 458545995885461489Rat
11433168LOC108351130uncharacterized LOC10835113058546400885465546Rat
410207263110040M04Rikl5RIKEN cDNA 3110040M04 gene like 558546807885469609Rat
41193095LOC120103080uncharacterized LOC12010308058547212485473655Rat
114872973110040M04Rikl1RIKEN cDNA 3110040M04 gene like 158547618585477725Rat
1592335Smarca2-ps2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, pseudogene 258551439885523157Rat
41325019LOC120103336small nucleolar RNA SNORA1758566586285665987Rat
1309237Tle1TLE family member 1, transcriptional corepressor58585182785934806Rat
41197324LOC120103332small nucleolar RNA SNORA1758675458386754709Rat
2324113Zfp101l1zinc finger protein 101 like 158687095386873370Rat
2324063Oma1-ps1OMA1 zinc metallopeptidase, pseudogene 158691306886915146Rat
41357879LOC120103337small nucleolar RNA SNORA1758699225086992375Rat
41164090Rpl34-ps8ribosomal protein L34, pseudogene 858701752187020226Rat
1592267Rps18-ps6ribosomal protein S18, pseudogene 658725020087250683Rat
41145427LOC120103327small nucleolar RNA SNORA1758750390987504029Rat
1306418RasefRAS and EF hand domain containing58754890887619286Rat
41144701LOC120102901uncharacterized LOC12010290158759930187602345Rat
11502494LOC108351096dnaJ homolog subfamily B member 1 pseudogene58768168087682686Rat
13595842310002L09RiklRIKEN cDNA 2310002L09 like58769273387706183Rat
1304802Frmd3FERM domain containing 358776475588031091Rat
11381374LOC108350987COMM domain-containing protein 2 pseudogene58802717288030854Rat
1562410Dppa3-ps2developmental pluripotency-associated 3, pseudogene 258809741888098963Rat
1307528Kdm4clysine demethylase 4C58810071088306821Rat
1589969Rpl9-ps24ribosomal protein L9, pseudogene 2458836086588361547Rat
41155933LOC120103302small nucleolar RNA SNORA1758857255288572680Rat
1589947Vom2r-ps76vomeronasal 2 receptor, pseudogene 7658869625688791737Rat
1309148Dmac1distal membrane arm assembly component 158924117389243793Rat
1589924Eef1g-ps16eukaryotic translation elongation factor 1 gamma, pseudogene 1658926144489263004Rat
2324835Mdh2-ps1malate dehydrogenase 2, pseudogene 158998218289984494Rat
1561090Ptprdprotein tyrosine phosphatase, receptor type, D59004699390698977Rat
41025543LOC120103209U6 spliceosomal RNA59060509090605193Rat
41013620Cog5-ps1component of oligomeric golgi complex 5, pseudogene 159064539790816683Rat
41344762Drg1-ps2developmentally regulated GTP binding protein 1, pseudogene 259089386490972201Rat
41309747LOC120103065uncharacterized LOC12010306559097382590991561Rat
1561090Ptprdprotein tyrosine phosphatase, receptor type, D59112235491641754Rat
7703644Ptprdlprotein tyrosine phosphatase, receptor type, D like59236841092380389Rat
41085030Zcchc9-ps3zinc finger CCHC-type containing 9, pseudogene 359239049992406353Rat
7558064LOC102555405uncharacterized LOC10255540559296352893021460Rat
1586073Ccdc47-ps1coiled-coil domain containing 47, pseudogene 159302161393023608Rat
41142637LOC120103155uncharacterized LOC12010315559306583793073188Rat
7746436LOC102555669uncharacterized LOC10255566959307964493197365Rat
2320392Pwp1-ps1PWP1 homolog, endonuclein, pseudogene 159323345393237397Rat
1563375Snrpn-ps4small nuclear ribonucleoprotein polypeptide N, pseudogene 459364967993650898Rat
9120358Hmgn4-ps6high mobility group nucleosomal binding domain 4, pseudogene 659405577094062563Rat
1587537Akr1b8-ps3aldo-keto reductase family 1, member B8, pseudogene 359428666894291222Rat
1587526Dkc1-ps3dyskerin pseudouridine synthase 1, pseudogene 359432124594322841Rat
1564021Rpl31-ps1ribosomal protein L31, pseudogene 159494831294948698Rat
41322042Fth1-ps2ferritin heavy chain 1, pseudogene 259508626195087200Rat
1586398Hpf1-ps1histone PARylation factor 1, pseudogene 159519946895200056Rat
41168764LOC120103291small nucleolar RNA SNORA4859520289795203037Rat
1593266Tyrp1tyrosinase-related protein 159528098295299516Rat
7509921LOC102556039uncharacterized LOC10255603959528349895314373Rat
1308059Lurap1lleucine rich adaptor protein 1-like59536200595409439Rat
1565987Fbxl18l1F-box and leucine-rich repeat protein 18 like 159546048095464873Rat
40972972LOC120102902protein PRRC2C-like59555314795562018Rat
11458786LOC108350991uncharacterized LOC10835099159566871795710953Rat
3105Mpdzmultiple PDZ domain crumbs cell polarity complex component59576611295920531Rat
40971150LOC120103321small nucleolar RNA SNORA1759583074095830865Rat
41044958LOC120103373U4 spliceosomal RNA59625456696254697Rat
41332442LOC120103156uncharacterized LOC12010315659638721896389315Rat
62015Nfibnuclear factor I/B59675920896974001Rat
6497980LOC100910558uncharacterized LOC10091055859697618197014187Rat
7694123LOC102551858uncharacterized LOC10255185859706604597072072Rat
11475977Trnah-gug10transfer RNA histidine (anticodon GUG) 1059708722797087298Rat
9408812LOC103692393uncharacterized LOC10369239359716511397170168Rat
1305750Zdhhc21zinc finger DHHC-type palmitoyltransferase 2159722762197286866Rat
1563046Cer1cerberus 1, DAN family BMP antagonist59730642797309783Rat
1306981Frem1Fras1 related extracellular matrix 159732126697469523Rat
7670779Dbf4-ps1DBF4 zinc finger, pseudogene 159742126497424352Rat
41016107LOC120103348small nucleolar RNA SNORA1759748166497481780Rat
7743271LOC102552278uncharacterized LOC10255227859751279797520488Rat
1305797Ttc39btetratricopeptide repeat domain 39B59760332997708103Rat
1586071Rps12-ps5ribosomal protein S12, pseudogene59773158297731984Rat
11405418Rps29-ps11ribosomal protein S29, pseudogene 1159776436997764539Rat
11499899LOC10835110140S ribosomal protein S17 pseudogene59779048697794517Rat
1583986Nsa2-ps12NSA2 ribosome biogenesis factor, pseudogene 1259780175197802605Rat
1305172Snapc3small nuclear RNA activating complex, polypeptide 359781782797868494Rat
631439Psip1PC4 and SRSF1 interacting protein 159784701097879280Rat
41129082Psip1lPC4 and SRSF1 interacting protein 1 like59787877297883186Rat
1560884Ccdc171coiled-coil domain containing 17159791996598403853Rat
40957686LOC120102904ladinin-1-like59825993498274752Rat
40974238LOC120103188U6 spliceosomal RNA59841452898414634Rat
11474955LOC108350993uncharacterized LOC10835099359847835098487366Rat
1310694Bnc2basonuclin zinc finger protein 259867907199016044Rat
41379561LOC120103247U7 small nuclear RNA59922995599230058Rat
9071259LOC103692399uncharacterized LOC10369239959925428299256197Rat
1308101Cntlncentlein59929586599576402Rat
1585925Ppia-ps11peptidylprolyl isomerase A, pseudogene 1159961185299612369Rat
620276Sh3gl2SH3 domain containing GRB2 like 2, endophilin A159965318999827500Rat
41170419Pgam1-ps6phosphoglycerate mutase 1, pseudogene 659968598999686573Rat
1306439Adamtsl1ADAMTS-like 1599964406100919786Rat
1583685Saxo1stabilizer of axonemal microtubules 15100937134101093308Rat
619804RragaRas-related GTP binding A5101113341101114936Rat
15203474Haus6HAUS augmin like complex subunit 65101116532101156396Rat
41394140Scarna8small Cajal body-specific RNA 85101124125101124255Rat
728889Plin2perilipin 25101156648101211738Rat
7660377LOC102547623uncharacterized LOC1025476235101226928101245243Rat
1308489Dennd4cDENN domain containing 4C5101272298101369529Rat
3602Rps6ribosomal protein S65101371716101374576Rat
1304629Acer2alkaline ceramidase 25101391830101442615Rat
628650Slc24a2solute carrier family 24 member 25101497916101741840Rat
11459931LOC108350995uncharacterized LOC1083509955102119628102128446Rat
620940Mllt3MLLT3, super elongation complex subunit5102259075102515447Rat
41316176LOC120103312small nucleolar RNA SNORA175102483194102483318Rat
1311849Focadfocadhesin5102564560102886587Rat
1310339Hacd43-hydroxyacyl-CoA dehydratase 45102887597102915376Rat
2865Ifnb1interferon beta 15103020758103021595Rat
1306334Ifna4interferon, alpha 45103069174103070120Rat
1306135Ifna1interferon, alpha 15103097356103097925Rat
1589875Ifna7l-ps1interferon, alpha 7 like, pseudogene 15103104672103105585Rat
41171666LOC120103203U6 spliceosomal RNA5103109366103109474Rat
1561246Ifna1l1interferon, alpha 1 like 15103144515103145269Rat
1359312Ifna5interferon, alpha 55103187852103188430Rat
1561827Ifna2l1interferon alpha 2 like 15103196737103197803Rat
1565225Ifna16l1interferon, alpha 16-like 15103216368103216984Rat
6487214LOC100912356interferon alpha-1-like5103227820103230500Rat
1311425Ifna2interferon alpha 25103258617103259195Rat
6502836LOC100909643interferon alpha-1-like5103273737103275988Rat
6487699LOC100912314interferon alpha-1-like5103285510103288640Rat
1559679Ifna4l2interferon, alpha 4 like 25103305221103305862Rat
41029367Rpl27a-ps12ribosomal protein L27a, pseudogene 125103328721103329166Rat
1304814Klhl9kelch-like family member 95103333747103337931Rat
1591738Rps24-ps10ribosomal protein S24, pseudogene 105103343786103344309Rat
41279671LOC120103158interferon alpha-12-like5103378576103379147Rat
41164037LOC120103159interferon alpha-12-like5103407135103407884Rat
41162071LOC120103160interferon alpha-12-like5103426092103427016Rat
41097131LOC120103161interferon alpha-12-like5103441204103442180Rat
40975974LOC120103162interferon alpha-1-like5103455380103455934Rat
1560539Ifna12linterferon alpha 12 like5103476362103477427Rat
41024711LOC120103163interferon alpha-12-like5103494442103495077Rat
41140167LOC120103164interferon alpha-12-like5103509610103510260Rat
6492384Ifna4l1interferon, alpha 4 like 15103524733103525302Rat
41074433LOC120103372U4 spliceosomal RNA5103532146103532302Rat
1565065Ifneinterferon, epsilon5103571630103572290Rat
329845494LOC130062807uncharacterized LOC1300628075103598328103627530Rat
4888605Mir3554microRNA 35545103599032103599149Rat
2325391Mir31microRNA 315103599038103599143Rat
329845392LOC130062808uncharacterized LOC1300628085103627694103629756Rat
1583723Nmt1-ps1N-myristoyltransferase 1, pseudogene 15103658873103662295Rat
11413299LOC108350998uncharacterized LOC1083509985103757997103779881Rat
2318341C5h9orf85similar to human chromosome 9 open reading frame 855103767094103767986Rat
1310114Mtapmethylthioadenosine phosphorylase5103874460103920684Rat
41034517Gskip-ps1GSK3B interacting protein, pseudogene 15103941903103943310Rat
2323Cdkn2acyclin-dependent kinase inhibitor 2A5103984949103992143Rat
2324Cdkn2bcyclin-dependent kinase inhibitor 2B5104009839104019082Rat
7697358LOC102552523uncharacterized LOC1025525235104019105104127037Rat
1588220Hspd1-ps14heat shock protein family D (Hsp60) member 1, pseudogene 145104129384104131678Rat
41260363LOC120102910uncharacterized LOC1201029105104171383104185974Rat
9404082LOC103692411uncharacterized LOC1036924115104410856104415793Rat
1309796Dmrta1DMRT-like family A15104415893104422433Rat
1584925Lmntd1-ps1lamin tail domain containing 1, pseudogene 15104595779104597302Rat
1560729Rps24-ps18ribosomal protein S24, pseudogene 185104729321104730083Rat
1563227Zfp352zinc finger protein 3525104946243104948087Rat
1310095Zfp353zinc finger protein 3535105075075105076667Rat
1583722Eef1g-ps13eukaryotic translation elongation factor 1 gamma, pseudogene 135105085925105111382Rat
1585888Vdac1-ps2voltage-dependent anion channel 1, pseudogene 25105313273105321698Rat
41388855Rnu6-698RNA, U6 small nuclear 6985105346075105346181Rat
6498356Ktn1-ps1kinectin 1, pseudogene 15105565480105575498Rat
41255483Ppia-ps8peptidylprolyl isomerase A, pseudogene 85105600882105603060Rat
41097241LOC120103318small nucleolar RNA SNORA175105738478105738609Rat
1584923Rps7-ps19ribosomal protein S7, pseudogene 195105902114105902692Rat
628611Elavl2ELAV like RNA binding protein 25105960872106086463Rat
41069231LOC120103166uncharacterized LOC1201031665106108110106109796Rat
41143086LOC120103387U6 spliceosomal RNA5106129987106130093Rat
7592700LOC102554351uncharacterized LOC1025543515106358753106371776Rat
6498231Hspd1-ps33heat shock protein family D (Hsp60) member 1, pseudogene 335106398781106403426Rat
2324467Izumo3IZUMO family member 35106874321106876978Rat
11416818LOC108351001uncharacterized LOC1083510015106877052106903186Rat
1560983Hnrnpa1-ps24heterogeneous nuclear ribonucleoprotein A1, pseudogene 245106906066106907230Rat
2323226Spcs2-ps1signal peptidase complex subunit 2, pseudogene 15106913633106915036Rat
1583529Cks1lCDC28 protein kinase regulatory subunit 1-like5106982443106983182Rat
1561150Hspd1l2heat shock protein family D (Hsp60) member 1 like 25107131587107131895Rat
41136247Rpl5-ps11ribosomal protein L5, pseudogene 115107212048107217257Rat
41394794LOC120103236U6 spliceosomal RNA5107652473107652571Rat
1592090Snu13-ps4small nuclear ribonucleoprotein 13, pseudogene 45107912017107912407Rat
41074883Tusc1tumor suppressor candidate 15108089952108091315Rat
7543605LOC102546952uncharacterized LOC1025469525108270998108359486Rat
41358010Rpl19-ps7ribosomal protein L19, pseudogene 75108333257108335787Rat
9284656LOC103692415uncharacterized LOC1036924155108723428108734153Rat
41215040LOC120102919uncharacterized LOC1201029195108831467108907138Rat
1560251Caap1caspase activity and apoptosis inhibitor 15109313253109414323Rat
40937684LOC120102920uncharacterized LOC1201029205109330329109338769Rat
621245Plaaphospholipase A2, activating protein5109428600109460373Rat
1359704Ift74intraflagellar transport 745109460372109563839Rat
1591722Lrrc19leucine rich repeat containing 195109494891109507948Rat
2325363Mir872microRNA 8725109539086109539166Rat
620980TekTEK receptor tyrosine kinase5109607077109733805Rat
1563332Eqtnequatorin5109734495109762048Rat
1311787Mysm1myb-like, SWIRM and MPN domains 15109761345109826652Rat
40989424LOC120103252small nucleolar RNA SNORA705109807447109807582Rat
41394229LOC120102921uncharacterized LOC1201029215109883550109887133Rat
2943JunJun proto-oncogene, AP-1 transcription factor subunit5109894175109897268Rat
6494360LOC100911221uncharacterized LOC1009112215109897523109949196Rat
7593337LOC102550339uncharacterized LOC1025503395110107244110110709Rat
40929618LOC120102923uncharacterized LOC1201029235110179996110186201Rat
41402458LOC120102924uncharacterized LOC1201029245110208856110225659Rat
41145702LOC120103235U1 spliceosomal RNA5110355813110355974Rat
1359429FggyFGGY carbohydrate kinase domain containing5110398866110786019Rat
9417869LOC103692418uncharacterized LOC1036924185110605125110712729Rat
41241770LOC120102925uncharacterized LOC1201029255110819794110824522Rat
1309987Hook1hook microtubule-tethering protein 15110824501110887791Rat
6486125LOC100912642cytochrome P450 2J3-like5110908195110930402Rat
1563215Cyp2j10cytochrome P450, family 2, subfamily j, polypeptide 105110960319110995220Rat
40982088Cyp2j16-ps1cytochrome P450, family 2, subfamily j, polypeptide 16, pseudogene 15111007780111057797Rat
1561242Cyp2j16cytochrome P450, family 2, subfamily j, polypeptide 165111089438111138918Rat
620007Cyp2j4cytochrome P450, family 2, subfamily j, polypeptide 45111179981111207490Rat
631442Cyp2j3cytochrome P450, family 2, subfamily j, polypeptide 35111219921111244987Rat
11381498LOC108351103ferritin light chain 1 pseudogene5111247525111248020Rat
1560146C5h1orf87similar to human chromosome 1 open reading frame 875111342381111411576Rat
41012570LOC120103241U7 small nuclear RNA5111397995111398057Rat
41316576LOC120103249U7 small nuclear RNA5111531651111531712Rat
41245849LOC120103242U7 small nuclear RNA5111531726111531787Rat
1597743Gid8-ps1GID complex subunit 8 homolog, pseudogene 15111562436111563265Rat
1592089Tbc1d5-ps1TBC1 domain family, member 5, pseudogene 15111564652111573058Rat
40966355LOC120103290small nucleolar RNA SNORA485111718328111718474Rat
7502785LOC102553524uncharacterized LOC1025535245112230510112246625Rat
41175373LOC120103115uncharacterized LOC1201031155112244680112248682Rat
41107926LOC120103114uncharacterized LOC1201031145112416267112442856Rat
3170Nfianuclear factor I/A5112436655112781878Rat
11413852LOC108351005uncharacterized LOC1083510055112797944112805529Rat
2318487Rps18l5ribosomal protein S18-like 55112997100112997655Rat
1305442Tm2d1TM2 domain containing 15113020793113062134Rat
1565362PatjPATJ, crumbs cell polarity complex component5113061985113364807Rat
1595093L1td1LINE-1 type transposase domain containing 15113373193113386088Rat
1307635Kank4KN motif and ankyrin repeat domains 45113401491113465526Rat
41215575Usp15-ps2ubiquitin specific peptidase 15, pseudogene 25113559958113563874Rat
1306461Usp1ubiquitin specific peptidase 15113587564113598934Rat
1309790Dock7dedicator of cytokinesis 75113599371113782871Rat
1564505Angptl3angiopoietin-like 35113703007113710044Rat
40981943Rpl15-ps14ribosomal protein L15, pseudogene 145113792289113793252Rat
1598323Atg4cautophagy related 4C, cysteine peptidase5113867218113935534Rat
7514994LOC102556219uncharacterized LOC1025562195113969322113977654Rat
2318140Tomm7-ps2translocase of outer mitochondrial membrane 7, pseudogene 25114217624114218000Rat
1591391Nsmce1-ps1NSE1 homolog, SMC5-SMC6 complex component, pseudogene 15114291743114292689Rat
7645046LOC102556374uncharacterized LOC1025563745114332364114334002Rat
621715Foxd3forkhead box D35114335084114337450Rat
1308815Alg6ALG6, alpha-1,3-glucosyltransferase5114404972114454440Rat
1310044Itgb3bpintegrin subunit beta 3 binding protein5114460217114525538Rat
1561825Efcab7EF-hand calcium binding domain 75114525403114576130Rat
3316Pgm1phosphoglucomutase 15114595298114654728Rat
1559469Ror1receptor tyrosine kinase-like orphan receptor 15114744311115088155Rat
41197686Rnu6-233RNA, U6 small nuclear 2335115066080115066186Rat
41373478LOC120103197U6 spliceosomal RNA5115097451115097553Rat
1565480Ube2uubiquitin conjugating enzyme E2 U5115118234115187296Rat
1310770Cachd1cache domain containing 15115411833115637312Rat
1307610Raver2ribonucleoprotein, PTB-binding 25115700985115780465Rat
69056Jak1Janus kinase 15115780248115888841Rat
41340414LOC120103217U6 spliceosomal RNA5115816834115816936Rat
41350661LOC120103254small nucleolar RNA SNORA705115961775115961902Rat
41367836LOC120102934uncharacterized LOC1201029345115963226115977411Rat
2325348Mir101amicroRNA 101a5115966332115966406Rat
41361854Rpl9-ps16ribosomal protein L9, pseudogene 165115982278115982849Rat
2078Ak4adenylate kinase 45116039222116099064Rat
1309900Dnajc6DnaJ heat shock protein family (Hsp40) member C65116120069116283448Rat
41379665LOC120102936uncharacterized LOC1201029365116198317116217439Rat
621034Leprotleptin receptor overlapping transcript5116289843116301951Rat
3001Leprleptin receptor5116294409116477904Rat
11421297Oog3-ps1oogenesin 3, pseudogene 15116480878116483954Rat
6500251Pramef12-ps1PRAME family member 12, pseudogene 15116534373116537110Rat
1587828Pramel18PRAME like 185116594690116601043Rat
7559665Oog3l2oogenesin 3 like 25116613783116615014Rat
41346487LOC120103168uncharacterized LOC1201031685116670973116707048Rat
3280Pde4bphosphodiesterase 4B5116799819117369155Rat
9264036LOC103692427uncharacterized LOC1036924275117278306117329847Rat
7556402LOC102548249uncharacterized LOC1025482495117352521117412598Rat
1564957Sgip1SH3GL interacting endocytic adaptor 15117536752117734593Rat
1311932Dynlt5dynein light chain Tctex-type family member 55117735509117758221Rat
9390410LOC103692428small EDRK-rich factor 2 pseudogene5117764116117764318Rat
7747960Insl5insulin like 55117773104117777376Rat
1311027Dnai4dynein axonemal intermediate chain 45117787398117876216Rat
1562337Mier1MIER1 transcriptional regulator5117876012117927592Rat
1309843Slc35d1solute carrier family 35 member D15117928628117981289Rat
1562532C5h1orf141similar to human chromosome 1 open reading frame 1415118000865118064520Rat
1304821Oma1OMA1 zinc metallopeptidase5118083728118136980Rat
41284048LOC120103366small nucleolar RNA U35118248246118248345Rat
1584921Ndufs2-ps1NADH:ubiquinone oxidoreductase core subunit S2, pseudogene 15118333499118337190Rat
628770Dab1DAB adaptor protein 15118392953119513625Rat
41398222LOC120103116uncharacterized LOC1201031165118861720118905161Rat
1592786Krt18-ps5keratin 18, pseudogene 55118885696118887657Rat
9097677Prpmp5l1proline-rich protein MP5 like 15119140608119141297Rat
41247414LOC120102937uncharacterized LOC1201029375119526679119538134Rat
2239C8bcomplement C8 beta chain5119535009119572565Rat
1308355C8acomplement C8 alpha chain5119583168119637675Rat
7654450LOC102547236uncharacterized LOC1025472365119668167119673199Rat
40980304LOC120103169uncharacterized LOC1201031695119673292119674938Rat
1564074Fyb2FYN binding protein 25119677116119800911Rat
11380122Sumo2l1small ubiquitin-like modifier 25119732630119735272Rat
620893Prkaa2protein kinase AMP-activated catalytic subunit alpha 25119807992119879987Rat
41296488LOC120102939uncharacterized LOC1201029395119887232119888833Rat
620454Plpp3phospholipid phosphatase 35119927085120002206Rat
41308087LOC120102940uncharacterized LOC1201029405119967274119994416Rat
7604289LOC102549668uncharacterized LOC1025496685120006217120012535Rat
9161289LOC103692433uncharacterized LOC1036924335120344175120357630Rat
41224678LOC120103289U2 spliceosomal RNA5120473916120474106Rat
1586416Rpl32l3ribosomal protein L32 like 35120631482120632245Rat
1584843Actb-ps9actin, beta, pseudogene 95120658714120659243Rat
41364653LOC120102941uncharacterized LOC1201029415120664956120672754Rat
41134400LOC120103170uncharacterized LOC1201031705120785823120801032Rat
40988753LOC120103293small nucleolar RNA SNORA485120966305120966422Rat
7497822LOC102547167uncharacterized LOC1025471675121057292121078382Rat
1306799Usp24ubiquitin specific peptidase 245121080687121210321Rat
728909Pcsk9proprotein convertase subtilisin/kexin type 95121211278121233688Rat
621139Bsndbarttin CLCNK type accessory subunit beta5121251774121260571Rat
1584102Tmem61transmembrane protein 615121266799121276426Rat
1306529Dhcr2424-dehydrocholesterol reductase5121344552121371124Rat
40998077LOC120102943uncharacterized LOC1201029435121360322121364747Rat
1559493Cimap2ciliary microtubule associated protein 25121375998121401869Rat
1561518Ttc22tetratricopeptide repeat domain 225121401973121423130Rat
41260485LOC120102944uncharacterized LOC1201029445121408508121412443Rat
1305345Pars2prolyl-tRNA synthetase 2, mitochondrial5121433993121439158Rat
1308529Ttc4tetratricopeptide repeat domain 45121444712121462381Rat
1563440Mroh7maestro heat-like repeat family member 75121463826121509233Rat
1359194Fam151afamily with sequence similarity 151, member A5121514804121527555Rat
2324815Acot11acyl-CoA thioesterase 115121523833121581699Rat
40970507LOC120102945uncharacterized LOC1201029455121621354121625108Rat
1597473Tlcd3b-ps1TLC domain containing 3B, pseudogene 15121681560121682371Rat
41334530LOC120102946uncharacterized LOC1201029465121688135121689649Rat
621502Ssbp3single stranded DNA binding protein 35121691370121828035Rat
619820Mrpl37mitochondrial ribosomal protein L375121827892121846187Rat
1597451Cyb5rlcytochrome b5 reductase-like5121846223121868287Rat
41169774LOC120102947uncharacterized LOC1201029475121856050121859503Rat
9112029Rpl28-ps1ribosomal protein L28, pseudogene 15121868202121868751Rat
1563467Cdcp2CUB domain containing protein 25121877581121894203Rat
1359481Tceanc2transcription elongation factor A N-terminal and central domain containing 25121923959121963018Rat
40985797Trnaa-agc38transfer RNA alanine (anticodon AGC) 385121943838121943912Rat
1310313Tmem59transmembrane protein 595121962507121983625Rat
1597398Ldlrad1low density lipoprotein receptor class A domain containing 15121984245122000941Rat
1308919Lrrc42leucine rich repeat containing 425122014678122035792Rat
1596413Ift25intraflagellar transport 255122035588122062421Rat
2504Dio1iodothyronine deiodinase 15122074285122090983Rat
735206Yipf1Yip1 domain family, member 15122112144122147729Rat
1560173Ndc1NDC1 transmembrane nucleoporin5122155992122202295Rat
1308030Glis1GLIS family zinc finger 15122222155122412141Rat
7506262LOC102551042uncharacterized LOC1025510425122296655122299913Rat
41311684LOC120102948uncharacterized LOC1201029485122301858122302471Rat
1560921Dmrtb1DMRT-like family B with proline-rich C-terminal, 15122444853122452483Rat
7548488LOC102551560uncharacterized LOC1025515605122474642122476368Rat
40937057LOC120103250U7 small nuclear RNA5122542313122542380Rat
1305729Lrp8LDL receptor related protein 85122563468122635434Rat
1305174Magohmago homolog, exon junction complex subunit5122639268122646650Rat
1559786CzibCXXC motif containing zinc binding protein5122648333122657767Rat
2398Cpt2carnitine palmitoyltransferase 25122664677122682126Rat
7585186Zc3hav1-ps9zinc finger CCCH-type containing, antiviral 1, pseudogene 95122692573122699273Rat
41250028LOC120103276small nucleolar RNA SNORA2/SNORA34 family5122726968122727103Rat
1311928Slc1a7solute carrier family 1 member 75122731003122775139Rat
7545693Podnpodocan5122774536122796755Rat
41078950LOC120103223U6 spliceosomal RNA5122805182122805288Rat
3642Scp2sterol carrier protein 25122806949122881259Rat
1308525Echdc2enoyl CoA hydratase domain containing 25122915874122934860Rat
1309582Zyg11azyg-11 family member A, cell cycle regulator5122935439122973766Rat
6500146Btf3-ps13basic transcription factor 3, pseudogene 135122951278122951824Rat
1307814Zyg11bzyg-11 family member B, cell cycle regulator5122985548123042735Rat
1305274Coa7cytochrome c oxidase assembly factor 75123069356123080942Rat
1593542Shisal2ashisa like 2A5123110577123126501Rat
1306999Gpx7glutathione peroxidase 75123145151123153141Rat
41030934Rpl9-ps7ribosomal protein L9, pseudogene 75123193865123195154Rat
1310138Tut4terminal uridylyl transferase 45123201723123306582Rat
7738149LOC10255467240S ribosomal protein S27-like5123216877123218666Rat
41398365LOC120103349small nucleolar RNA SNORA405123218554123218681Rat
41104723Rnu6-67RNA, U6 small nuclear 675123280963123281069Rat
1311129Prpf38apre-mRNA processing factor 38A5123312461123324160Rat
631435Orc1origin recognition complex, subunit 15123324273123348375Rat
1306630Cc2d1bcoiled-coil and C2 domain containing 1B5123353289123367343Rat
1310856Zfyve9zinc finger FYVE-type containing 95123370677123529699Rat
41360960Rpl9-ps8ribosomal protein L9, pseudogene 85123483635123484270Rat
1311774Btf3l4basic transcription factor 3-like 45123567902123587527Rat
1305960Txndc12thioredoxin domain containing 125123587854123612886Rat
1591357Kti12KTI12 chromatin associated5123601059123602581Rat
620922Rab3bRAB3B, member RAS oncogene family5123629562123697410Rat
41302851Rnu6-304RNA, U6 small nuclear 3045123754011123754111Rat
3210Nrdcnardilysin convertase5123755807123818910Rat
2325411Mir761microRNA 7615123776534123776609Rat
1311508Osbpl9oxysterol binding protein-like 95123819106123962213Rat
41337561LOC120103121uncharacterized LOC1201031215123891920123896857Rat
1591090Calr4calreticulin 45123986870124022436Rat
11410745LOC108351012uncharacterized LOC1083510125123999719124012690Rat
1305550Eps15epidermal growth factor receptor pathway substrate 155124045865124146221Rat
1311126Ttc39atetratricopeptide repeat domain 39A5124165102124204740Rat
2321596Rnf11ring finger protein 115124212433124243125Rat
41086853Rnu4-2RNA, U4 small nuclear 25124264229124264369Rat
1591038C5h1orf185similar to human chromosome 1 open reading frame 1855124276074124295881Rat
41264577LOC120103306small nucleolar RNA SNORA175124306820124306946Rat
1584919Eno1-ps10enolase 1, pseudogene 105124325978124327290Rat
2325Cdkn2ccyclin-dependent kinase inhibitor 2C5124411123124416278Rat
70987Faf1Fas associated factor 15124426032124790014Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10262D5Rhm31335119564714119564847Ratregion
10263D5Rhm41455119592239119592384Ratregion
10321D5Lev171235103991975103992098Ratregion
10324D5Lev191835124411616124411799Ratregion
10826D5Mgh231225109897808109897936Ratregion
10827D5Lev152925109894810109895102Ratregion
11090D5Rhm21695114659557114659726Ratregion
33804D5Mit62165117817033117817245Ratregion
33967D5Mit330058108229081082586Ratregion
33981D5Mit426659045014490450412Ratregion
33985D5Mit1114558361072983610862Ratregion
34041D5Mit51445104250862104251008Ratregion
36135D5Rat2016858463946784639641Ratregion
36139D5Rat271365118370674118370807Ratregion
35306D5Rat261545113558156113558310Ratregion
35545D5Rat28945120740824120740915Ratregion
37200D5Rat782375114305693114305938Ratregion
37644D5Rat1152035112419535112419733Ratregion
37680D5Rat6423959793714997937392Ratregion
37690D5Rat9223859559615095596396Ratregion
37772DXRat532795103857355103857402Ratregion
37944D5Rat831985119385986119386155Ratregion
37950D5Rat951605124048559124048658Ratregion
36558D5Rat1916858672382786724018Ratregion
36634D5Rat1713158145011481450254Ratregion
36667D5Rat542645120182440120182703Ratregion
36687D5Rat251745113060909113061097Ratregion
35032D5Rat1816058886887988869033Ratregion
35074D5Rat232055102084761102084960Ratregion
35577D5Rat2116659511206595112231Ratregion
35771D5Rat2216559757016597570330Ratregion
35785D5Rat242965101278414101278701Ratregion
35961D5Rat5318859921653999216724Ratregion
39796D5Rat15023659607117596071342Ratregion
39952D5Rat1582055119085612119085810Ratregion
38156D5Rat1012115116021949116022166Ratregion
38308D5Rat10716159040530290405423Ratregion
40384D5Rat18313059628554396285673Ratregion
40548D5Rat1551545110589458110589608Ratregion
40574D5Rat19615059948599799486133Ratregion
38508D5Rat602465101467719101467963Ratregion
38546D5Rat6823858163002581630249Ratregion
38700D5Rat8524758592266185922904Ratregion
40138D5Rat1601375122994775122994914Ratregion
40176D5Rat1631325123045178123045306Ratregion
38848D5Rat8823659528829395288541Ratregion
39066D5Rat712155109967940109968152Ratregion
39078D5Rat962295119429867119430093Ratregion
39224D5Rat9822959577419495774399Ratregion
39248D5Rat722265114973303114973531Ratregion
39378D5Rat14920459705976097059958Ratregion
42750D5Rat23123759988536199885595Ratregion
42751D5Rat2322335114305693114305935Ratregion
42752D5Rat2332205118714244118714492Ratregion
42754D5Rat1981545119536444119536604Ratregion
42755D5Rat2592255120368789120369004Ratregion
42765D5Rat25822158534999385350219Ratregion
41192D5Rat1522205102816790102817014Ratregion
41318D5Rat14713358239439282394565Ratregion
41408D5Rat1621555120167910120168061Ratregion
41424D5Rat1561755110265888110266058Ratregion
42319D5Rat2562405108938288108938528Ratregion
41560D5Rat1531635103689353103689768Ratregion
41560D5Rat1531635103689674103690167Ratregion
41560D5Rat1531635103689997103690167Ratregion
41576D5Rat15115959975354899753708Ratregion
41678D5Rat1971815112426055112426208Ratregion
41776D5Rat21121459161836791618574Ratregion
44552D9Wox211365109552936109552993Ratregion
43915D5Got1613457961481279614946Ratregion
43917D5Got2017758183724581837422Ratregion
43918D5Got2222958247860682478831Ratregion
43919D5Got12417358253949782539670Ratregion
43920D5Got2319658376654383766739Ratregion
43921D5Got12622458499908584999311Ratregion
43922D5Got2112558528618185286306Ratregion
43923D5Got12516158592818985928350Ratregion
43928D5Wox312059485897294859095Ratregion
43929D5Got12823659682413896824374Ratregion
43930D5Wox415759860287098603051Ratregion
43932D5Got12914959961461499614763Ratregion
43934D5Got301335100749175100749308Ratregion
43935D5Got281395101660429101660568Ratregion
43936D5Got1311535101112265101112414Ratregion
43940D5Got271705104607788104607958Ratregion
43942D5Got331385110075805110075940Ratregion
43943D5Got361265109141749109141875Ratregion
43944D5Wox182735112450727112450995Ratregion
43945D5Got391875112936348112936533Ratregion
43948D5Got381475112393083112393230Ratregion
43949D5Got1331865113505602113505790Ratregion
43951D5Got371545114165957114166111Ratregion
43954D5Got471855124456846124457033Ratregion
43959D5Got1342345124129411124129641Ratregion
43960D5Got442775123783115123783392Ratregion
43961D5Got532735121550838121551111Ratregion
45054D13Got229459354117093542503Ratregion
60479D5Got2413259145437491454506Ratregion
60480D5Got251255106732222106732345Ratregion
60481D5Got312325101703657101703889Ratregion
60482D5Got322175117744887117745099Ratregion
60483D5Got342775111548415111548692Ratregion
60484D5Got351605111564698111564858Ratregion
60485D5Got421815124160767124160948Ratregion
60486D5Got431485124299554124299701Ratregion
60487D5Got462895124074311124074597Ratregion
60488D5Got481875123142871123143055Ratregion
60808D5Wox251585109050865109051012Ratregion
69515D5Uwm231865101607489101607673Ratregion
69519D5Uwm251865101387969101388153Ratregion
69521D5Uwm261335101847538101847681Ratregion
69523D5Uwm271455103005080103005247Ratregion
69525D5Uwm281445105629979105630117Ratregion
69527D5Uwm291635109719127109719390Ratregion
69547D5Uwm301695115439450115439638Ratregion
69558D5Uwm341665124153416124153572Ratregion
69567D5Uwm371775123935167123935338Ratregion
62483D5Uia11895123388476123388665Ratregion
62484D5Uia21335105221933105222066Ratregion
62505D5Uia536058224118482241537Ratregion
66410D5Mco31345121352214121352347Ratregion
66444D5Uia123925107521767107522145Ratregion
629614D5Hmgc11675101374078101374246Ratregion
66700D5Mco3312858648036786480495Ratregion
67270D5Arb28158651684186516922Ratregion
67361D5Arb172445109897663109897907Ratregion
67766D5Uwm112458952483989524947Ratregion
67768D5Uwm212059661487496614994Ratregion
1630121D5Got3042445122224547122224791Ratregion
1630234D5Got27221758736218087362397Ratregion
1631883D5Got2451045117534427117534531Ratregion
1631934D5Got28722359099380990994032Ratregion
1632130D5Got26712159825660098256721Ratregion
1582002D5Uwm6127458081311680813390Ratregion
1626716D5Rhw111775116758053116758230Ratregion
1626718D5Rhw211925116967554116967746Ratregion
1626720D5Rhw221605116975112116975270Ratregion
1626724D5Rhw101835116748741116748924Ratregion
1626726D5Rhw72065116653633116653839Ratregion
1626728D5Rhw182295116909826116910055Ratregion
1626734D5Rhw81905116668797116668989Ratregion
1626736D5Rhw152365116821291116821529Ratregion
1626738D5Rhw52195116520024116520243Ratregion
1626740D5Rhw141615116799321116799482Ratregion
1626742D5Rhw91795116741307116741486Ratregion
1626744D5Rhw201575116958954116959109Ratregion
1626746D5Rhw41635116480095116480258Ratregion
1626750D5Rhw171965116900099116900295Ratregion
1626754D5Rhw122025116763310116763512Ratregion
1626756D5Rhw22045116215221116215425Ratregion
1626760D5Rhw191565116944810116944966Ratregion
1626770D5Rhw31675116259680116259847Ratregion
1626774D5Rhw12105116206626116206836Ratregion
1626776D5Rhw131915116795765116795958Ratregion
1626780D5Rhw165116844944116845134Ratregion
1627041Cpt22535122667705122667958Ratregion
1627311Pde4b2005116993488116993688Ratregion
1627439Nrd12595123755052123755311Ratregion
1627770D5Wox415101502201101502377Ratregion
1628979D5Wox381815116360112116360293Ratregion
1629201D5Got30210859795059497950697Ratregion
1629468D5Got1323005115813691115813986Ratregion
1629713D5Got2441445113426023113426167Ratregion
1629848D5Got2919459733135197331445Ratregion
1630039D5Got29614958295380182953950Ratregion
1639076D5Got2378758529613985296226Ratregion
1639577D5Got30917458329499883295169Ratregion
1639671D5Got2471875119393552119393734Ratregion
1632630D5Got23818359120129891201464Ratregion
1633607D5Got2481985120656816120657014Ratregion
1639895D5Got2461515117177749117177900Ratregion
1640190D5Got31226459579395095794214Ratregion
1640622D5Got3112495114773489114773738Ratregion
1635459D5Got27327458145238181452653Ratregion
1635541D5Got2421325111179889111180021Ratregion
1635885D5Got2431275107474818107474945Ratregion
1636554D5Got25418359219051992190702Ratregion
1636896D5Got25622159586086995861088Ratregion
1633869D5Got2579859828456498284662Ratregion
1634204D5Wox391485116368606116368754Ratregion
1634628D5Got2411955100113215100113410Ratregion
2300293D5Rhw232115116292445116292656Ratregion
2315222D16Nkg703195108885691108885972Ratregion
7794805D5Mco412135117913475117913688Ratregion
7794807D5Mco422275116047089116047316Ratregion
7794818D5Mco472185112175328112175546Ratregion
7192368Elavl2665105963428105963494Ratregion
7206270Mysm16175109793011109793628Ratregion
5035755D1S30211115119513438119513549Ratregion
5035763D9S201212659675922396759349Ratregion
5035853PMC240671P13825120658784120659043Ratregion
5035863PMC25763P11555117367073117367228Ratregion
5038622AU0224662045124022072124022276Ratregion
5035889PMC289161P130458015854480158848Ratregion
5035971PMC337033P12255105962737105962962Ratregion
5035971PMC337033P12255105962737105963351Ratregion
5035971PMC337033P12255105962787105962962Ratregion
5036069Actb-rs12885120658727120659015Ratregion
5036097UniSTS:1412181755102623667102623851Ratregion
7206256Olfm1845113761244113761328Ratregion
7206532UniSTS:5469209045121436263121437167Ratregion
7206572UniSTS:54709010355117934873117935908Ratregion
5036221D4Bwg0951e12859540930895409436Ratregion
5036380Jun4265109896604109897030Ratregion
5039140RH1275351875103766729103766916Ratregion
5036653AU0487272315111945494111945729Ratregion
5036755AU04910117458629004386290217Ratregion
5031226PMC104029P14525120658192120658630Ratregion
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5501940MARC_17865-17866:1025013775:148759676516596765652Ratregion
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Position Markers

Peak: (D5Rat23)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25102,084,761 - 102,084,960 (+)MAPPER
Rnor_6.05105,924,457 - 105,924,655NCBI
Rnor_5.05109,910,568 - 109,910,766UniSTS
RGSC_v3.45106,892,028 - 106,892,227RGD
RGSC_v3.45106,892,029 - 106,892,227UniSTS
RGSC_v3.15106,897,254 - 106,897,453RGD
Celera5101,018,721 - 101,018,921UniSTS
SHRSP x BN Map558.1599RGD
SHRSP x BN Map558.1599UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5111416838156416838Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)579584860124584860Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
2302381Bw84Body weight QTL 844.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
1582230Bw78Body weight QTL 783.20.0016epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)5119085612128034027Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)579584860124584860Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
7411561Bw134Body weight QTL 134240.001body mass (VT:0001259)body weight gain (CMO:0000420)54946360094463600Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5106906205151906205Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)597570330136479578Rat
1582212Livw2Liver weight QTL 23.50.0004liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)599016066119085810Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)587468046132468046Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)5108938288153938288Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5105999803150999803Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5120740824151018848Rat
1331773Scl26Serum cholesterol level QTL 263.065blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)54372665686724018Rat
1358909Kidm25Kidney mass QTL 251.87kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)590067849128034027Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)5103689353148689353Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5106906205151906205Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5111416838156416838Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5106906205151906205Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)555715622100715622Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5111416838156416838Rat
9589025Epfw7Epididymal fat weight QTL 720.660.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)54946360094463600Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)584132602129132602Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)566174080124160948Rat
2316954Rf57Renal function QTL 570kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)55979352890450144Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5108845856153845856Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)558829236128034027Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)534944474113558310Rat
1358889Bp261Blood pressure QTL 2612.86arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)590067849128034027Rat
2316957Pur21Proteinuria QTL 216.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)559793528113558156Rat
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)568984307104251008Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)597059760147465714Rat
7794743Bp373Blood pressure QTL 3730.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5112175546116047089Rat
61380Edpm5Estrogen-dependent pituitary mass QTL 54.50.92pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)568984307104251008Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
7794739Bp372Blood pressure QTL 3720.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5117913688125222967Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)56029343498603051Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
1331782Rf36Renal function QTL 363.296kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)58384059897059958Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5106906205151906205Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5106906205151906205Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5121846814166846814Rat
2303615Vencon7Ventilatory control QTL 70.001respiration trait (VT:0001943)respiration rate (CMO:0000289)55098389595983895Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5120740824143608494Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
7394708Emca11Estrogen-induced mammary cancer QTL 11mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)599753548113061097Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)534730116104251008Rat
1598845Mcs14Mammary carcinoma susceptibility QTL 140.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)57636977680813390Rat
1598846Bp293Blood pressure QTL 2933.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)579584860124584860Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5124160767133749643Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5108845856153845856Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
631527Tls1T-lymphoma susceptibility QTL 100.001thymus integrity trait (VT:0010555)post-insult time to onset of T-cell lymphoma (CMO:0001907)590450144135450144Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5111416838156416838Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)569540295151018848Rat
1600362Mcs19Mammary carcinoma susceptibility QTL 192.5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)599485997103690167Rat
2303574Gluco42Glucose level QTL 422blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)55349671998496719Rat
2290005Mcs24Mammary carcinoma susceptibility QTL 24mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)564719390109719390Rat
2312671Scl64Serum cholesterol level QTL 640.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)568984307104251008Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)587765973132765973Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)599216724148607142Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general parental S allele was responsible for increased trait 1581737
qtl_statistics_details 8% NaCl diet was started at 12 weeks of age and given for 12 weeks for females 1581737