LOC120103252 (small nucleolar RNA SNORA70) - Rat Genome Database

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Gene: LOC120103252 (small nucleolar RNA SNORA70) Rattus norvegicus
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Symbol: LOC120103252
Name: small nucleolar RNA SNORA70
RGD ID: 40989424
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: SNORA70
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85114,923,180 - 114,923,315 (-)NCBIGRCr8
mRatBN7.25109,807,447 - 109,807,582 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5109,807,447 - 109,807,582 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl5113,926,518 - 113,926,653 (-)NCBIRnor6.0rn6Rnor6.0
Cytogenetic Map5q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC120103252
1 total Variants

1 to 10 of 45 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)597059760147465714Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)579584860124584860Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)579584860124584860Rat

1 to 10 of 45 rows





RefSeq Transcripts XR_005505335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000082265
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5109,807,447 - 109,807,582 (-)Ensembl
RefSeq Acc Id: XR_005505335
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85114,923,180 - 114,923,315 (-)NCBI
mRatBN7.25109,807,447 - 109,807,582 (-)NCBI

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-40697 BioCyc
Ensembl Genes ENSRNOG00000059502 Ensembl
NCBI Gene LOC120103252 ENTREZGENE
PhenoGen LOC120103252 PhenoGen
RatGTEx ENSRNOG00000059502 RatGTEx
RNAcentral URS000066533A RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 LOC120103252  small nucleolar RNA SNORA70  SNORA70  Small nucleolar RNA SNORA70  Data merged from RGD:15012605 737654 PROVISIONAL
2021-01-26 LOC120103252  small nucleolar RNA SNORA70      Symbol and Name status set to provisional 70820 PROVISIONAL
2019-11-08 SNORA70  Small nucleolar RNA SNORA70      Symbol and Name status set to provisional 45752 PROVISIONAL