Bp261 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp261 (Blood pressure QTL 261) Rattus norvegicus

Symbol: Bp261
Name: Blood pressure QTL 261
RGD ID: 1358889
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: mean arterial blood pressure   (CMO:0000009)    
LOD Score: 2.86
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2590,067,849 - 128,034,027RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0593,037,304 - 133,313,852RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0597,128,212 - 137,108,002RGDRnor5.0
RGSC_v3.4594,084,025 - 134,872,385RGDRGSC3.4
RGSC_v3.1594,089,552 - 134,877,312RGD
Cross Type: Not Available
Strains Crossed: LEW HTG 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
HTG  (IEA)
LEW  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Gender-specific genetic determinants of blood pressure and organ weight: pharmacogenetic approach. Ueno T, etal., Physiol Res 2003;52(6):689-700.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1561090Ptprdprotein tyrosine phosphatase, receptor type, D59004699390698977Rat
41025543LOC120103209U6 spliceosomal RNA59060509090605193Rat
41013620Cog5-ps1component of oligomeric golgi complex 5, pseudogene 159064539790816683Rat
41344762Drg1-ps2developmentally regulated GTP binding protein 1, pseudogene 259089386490972201Rat
41309747LOC120103065uncharacterized LOC12010306559097382590991561Rat
1561090Ptprdprotein tyrosine phosphatase, receptor type, D59112235491641754Rat
7703644Ptprdlprotein tyrosine phosphatase, receptor type, D like59236841092380389Rat
41085030Zcchc9-ps3zinc finger CCHC-type containing 9, pseudogene 359239049992406353Rat
7558064LOC102555405uncharacterized LOC10255540559296352893021460Rat
1586073Ccdc47-ps1coiled-coil domain containing 47, pseudogene 159302161393023608Rat
41142637LOC120103155uncharacterized LOC12010315559306583793073188Rat
7746436LOC102555669uncharacterized LOC10255566959307964493197365Rat
2320392Pwp1-ps1PWP1 homolog, endonuclein, pseudogene 159323345393237397Rat
1563375Snrpn-ps4small nuclear ribonucleoprotein polypeptide N, pseudogene 459364967993650898Rat
9120358Hmgn4-ps6high mobility group nucleosomal binding domain 4, pseudogene 659405577094062563Rat
1587537Akr1b8-ps3aldo-keto reductase family 1, member B8, pseudogene 359428666894291222Rat
1587526Dkc1-ps3dyskerin pseudouridine synthase 1, pseudogene 359432124594322841Rat
1564021Rpl31-ps1ribosomal protein L31, pseudogene 159494831294948698Rat
41322042Fth1-ps2ferritin heavy chain 1, pseudogene 259508626195087200Rat
1586398Hpf1-ps1histone PARylation factor 1, pseudogene 159519946895200056Rat
41168764LOC120103291small nucleolar RNA SNORA4859520289795203037Rat
1593266Tyrp1tyrosinase-related protein 159528098295299516Rat
7509921LOC102556039uncharacterized LOC10255603959528349895314373Rat
1308059Lurap1lleucine rich adaptor protein 1-like59536200595409439Rat
1565987Fbxl18l1F-box and leucine-rich repeat protein 18 like 159546048095464873Rat
40972972LOC120102902protein PRRC2C-like59555314795562018Rat
11458786LOC108350991uncharacterized LOC10835099159566871795710953Rat
3105Mpdzmultiple PDZ domain crumbs cell polarity complex component59576611295920531Rat
40971150LOC120103321small nucleolar RNA SNORA1759583074095830865Rat
41044958LOC120103373U4 spliceosomal RNA59625456696254697Rat
41332442LOC120103156uncharacterized LOC12010315659638721896389315Rat
62015Nfibnuclear factor I/B59675920896974001Rat
6497980LOC100910558uncharacterized LOC10091055859697618197014187Rat
7694123LOC102551858uncharacterized LOC10255185859706604597072072Rat
11475977Trnah-gug10transfer RNA histidine (anticodon GUG) 1059708722797087298Rat
9408812LOC103692393uncharacterized LOC10369239359716511397170168Rat
1305750Zdhhc21zinc finger DHHC-type palmitoyltransferase 2159722762197286866Rat
1563046Cer1cerberus 1, DAN family BMP antagonist59730642797309783Rat
1306981Frem1Fras1 related extracellular matrix 159732126697469523Rat
7670779Dbf4-ps1DBF4 zinc finger, pseudogene 159742126497424352Rat
41016107LOC120103348small nucleolar RNA SNORA1759748166497481780Rat
7743271LOC102552278uncharacterized LOC10255227859751279797520488Rat
1305797Ttc39btetratricopeptide repeat domain 39B59760332997708103Rat
1586071Rps12-ps5ribosomal protein S12, pseudogene59773158297731984Rat
11405418Rps29-ps11ribosomal protein S29, pseudogene 1159776436997764539Rat
11499899LOC10835110140S ribosomal protein S17 pseudogene59779048697794517Rat
1583986Nsa2-ps12NSA2 ribosome biogenesis factor, pseudogene 1259780175197802605Rat
1305172Snapc3small nuclear RNA activating complex, polypeptide 359781782797868494Rat
631439Psip1PC4 and SRSF1 interacting protein 159784701097879280Rat
41129082Psip1lPC4 and SRSF1 interacting protein 1 like59787877297883186Rat
1560884Ccdc171coiled-coil domain containing 17159791996598403853Rat
40957686LOC120102904ladinin-1-like59825993498274752Rat
40974238LOC120103188U6 spliceosomal RNA59841452898414634Rat
11474955LOC108350993uncharacterized LOC10835099359847835098487366Rat
1310694Bnc2basonuclin zinc finger protein 259867907199016044Rat
41379561LOC120103247U7 small nuclear RNA59922995599230058Rat
9071259LOC103692399uncharacterized LOC10369239959925428299256197Rat
1308101Cntlncentlein59929586599576402Rat
1585925Ppia-ps11peptidylprolyl isomerase A, pseudogene 1159961185299612369Rat
620276Sh3gl2SH3 domain containing GRB2 like 2, endophilin A159965318999827500Rat
41170419Pgam1-ps6phosphoglycerate mutase 1, pseudogene 659968598999686573Rat
1306439Adamtsl1ADAMTS-like 1599964406100919786Rat
1583685Saxo1stabilizer of axonemal microtubules 15100937134101093308Rat
619804RragaRas-related GTP binding A5101113341101114936Rat
15203474Haus6HAUS augmin like complex subunit 65101116532101156396Rat
41394140Scarna8small Cajal body-specific RNA 85101124125101124255Rat
728889Plin2perilipin 25101156648101211738Rat
7660377LOC102547623uncharacterized LOC1025476235101226928101245243Rat
1308489Dennd4cDENN domain containing 4C5101272298101369529Rat
3602Rps6ribosomal protein S65101371716101374576Rat
1304629Acer2alkaline ceramidase 25101391830101442615Rat
628650Slc24a2solute carrier family 24 member 25101497916101741840Rat
11459931LOC108350995uncharacterized LOC1083509955102119628102128446Rat
620940Mllt3MLLT3, super elongation complex subunit5102259075102515447Rat
41316176LOC120103312small nucleolar RNA SNORA175102483194102483318Rat
1311849Focadfocadhesin5102564560102886587Rat
1310339Hacd43-hydroxyacyl-CoA dehydratase 45102887597102915376Rat
2865Ifnb1interferon beta 15103020758103021595Rat
1306334Ifna4interferon, alpha 45103069174103070120Rat
1306135Ifna1interferon, alpha 15103097356103097925Rat
1589875Ifna7l-ps1interferon, alpha 7 like, pseudogene 15103104672103105585Rat
41171666LOC120103203U6 spliceosomal RNA5103109366103109474Rat
1561246Ifna1l1interferon, alpha 1 like 15103144515103145269Rat
1359312Ifna5interferon, alpha 55103187852103188430Rat
1561827Ifna2l1interferon alpha 2 like 15103196737103197803Rat
1565225Ifna16l1interferon, alpha 16-like 15103216368103216984Rat
6487214LOC100912356interferon alpha-1-like5103227820103230500Rat
1311425Ifna2interferon alpha 25103258617103259195Rat
6502836LOC100909643interferon alpha-1-like5103273737103275988Rat
6487699LOC100912314interferon alpha-1-like5103285510103288640Rat
1559679Ifna4l2interferon, alpha 4 like 25103305221103305862Rat
41029367Rpl27a-ps12ribosomal protein L27a, pseudogene 125103328721103329166Rat
1304814Klhl9kelch-like family member 95103333747103337931Rat
1591738Rps24-ps10ribosomal protein S24, pseudogene 105103343786103344309Rat
41279671LOC120103158interferon alpha-12-like5103378576103379147Rat
41164037LOC120103159interferon alpha-12-like5103407135103407884Rat
41162071LOC120103160interferon alpha-12-like5103426092103427016Rat
41097131LOC120103161interferon alpha-12-like5103441204103442180Rat
40975974LOC120103162interferon alpha-1-like5103455380103455934Rat
1560539Ifna12linterferon alpha 12 like5103476362103477427Rat
41024711LOC120103163interferon alpha-12-like5103494442103495077Rat
41140167LOC120103164interferon alpha-12-like5103509610103510260Rat
6492384Ifna4l1interferon, alpha 4 like 15103524733103525302Rat
41074433LOC120103372U4 spliceosomal RNA5103532146103532302Rat
1565065Ifneinterferon, epsilon5103571630103572290Rat
329845494LOC130062807uncharacterized LOC1300628075103598328103627530Rat
4888605Mir3554microRNA 35545103599032103599149Rat
2325391Mir31microRNA 315103599038103599143Rat
329845392LOC130062808uncharacterized LOC1300628085103627694103629756Rat
1583723Nmt1-ps1N-myristoyltransferase 1, pseudogene 15103658873103662295Rat
11413299LOC108350998uncharacterized LOC1083509985103757997103779881Rat
2318341C5h9orf85similar to human chromosome 9 open reading frame 855103767094103767986Rat
1310114Mtapmethylthioadenosine phosphorylase5103874460103920684Rat
41034517Gskip-ps1GSK3B interacting protein, pseudogene 15103941903103943310Rat
2323Cdkn2acyclin-dependent kinase inhibitor 2A5103984949103992143Rat
2324Cdkn2bcyclin-dependent kinase inhibitor 2B5104009839104019082Rat
7697358LOC102552523uncharacterized LOC1025525235104019105104127037Rat
1588220Hspd1-ps14heat shock protein family D (Hsp60) member 1, pseudogene 145104129384104131678Rat
41260363LOC120102910uncharacterized LOC1201029105104171383104185974Rat
9404082LOC103692411uncharacterized LOC1036924115104410856104415793Rat
1309796Dmrta1DMRT-like family A15104415893104422433Rat
1584925Lmntd1-ps1lamin tail domain containing 1, pseudogene 15104595779104597302Rat
1560729Rps24-ps18ribosomal protein S24, pseudogene 185104729321104730083Rat
1563227Zfp352zinc finger protein 3525104946243104948087Rat
1310095Zfp353zinc finger protein 3535105075075105076667Rat
1583722Eef1g-ps13eukaryotic translation elongation factor 1 gamma, pseudogene 135105085925105111382Rat
1585888Vdac1-ps2voltage-dependent anion channel 1, pseudogene 25105313273105321698Rat
41388855Rnu6-698RNA, U6 small nuclear 6985105346075105346181Rat
6498356Ktn1-ps1kinectin 1, pseudogene 15105565480105575498Rat
41255483Ppia-ps8peptidylprolyl isomerase A, pseudogene 85105600882105603060Rat
41097241LOC120103318small nucleolar RNA SNORA175105738478105738609Rat
1584923Rps7-ps19ribosomal protein S7, pseudogene 195105902114105902692Rat
628611Elavl2ELAV like RNA binding protein 25105960872106086463Rat
41069231LOC120103166uncharacterized LOC1201031665106108110106109796Rat
41143086LOC120103387U6 spliceosomal RNA5106129987106130093Rat
7592700LOC102554351uncharacterized LOC1025543515106358753106371776Rat
6498231Hspd1-ps33heat shock protein family D (Hsp60) member 1, pseudogene 335106398781106403426Rat
2324467Izumo3IZUMO family member 35106874321106876978Rat
11416818LOC108351001uncharacterized LOC1083510015106877052106903186Rat
1560983Hnrnpa1-ps24heterogeneous nuclear ribonucleoprotein A1, pseudogene 245106906066106907230Rat
2323226Spcs2-ps1signal peptidase complex subunit 2, pseudogene 15106913633106915036Rat
1583529Cks1lCDC28 protein kinase regulatory subunit 1-like5106982443106983182Rat
1561150Hspd1l2heat shock protein family D (Hsp60) member 1 like 25107131587107131895Rat
41136247Rpl5-ps11ribosomal protein L5, pseudogene 115107212048107217257Rat
41394794LOC120103236U6 spliceosomal RNA5107652473107652571Rat
1592090Snu13-ps4small nuclear ribonucleoprotein 13, pseudogene 45107912017107912407Rat
41074883Tusc1tumor suppressor candidate 15108089952108091315Rat
7543605LOC102546952uncharacterized LOC1025469525108270998108359486Rat
41358010Rpl19-ps7ribosomal protein L19, pseudogene 75108333257108335787Rat
9284656LOC103692415uncharacterized LOC1036924155108723428108734153Rat
41215040LOC120102919uncharacterized LOC1201029195108831467108907138Rat
1560251Caap1caspase activity and apoptosis inhibitor 15109313253109414323Rat
40937684LOC120102920uncharacterized LOC1201029205109330329109338769Rat
621245Plaaphospholipase A2, activating protein5109428600109460373Rat
1359704Ift74intraflagellar transport 745109460372109563839Rat
1591722Lrrc19leucine rich repeat containing 195109494891109507948Rat
2325363Mir872microRNA 8725109539086109539166Rat
620980TekTEK receptor tyrosine kinase5109607077109733805Rat
1563332Eqtnequatorin5109734495109762048Rat
1311787Mysm1myb-like, SWIRM and MPN domains 15109761345109826652Rat
40989424LOC120103252small nucleolar RNA SNORA705109807447109807582Rat
41394229LOC120102921uncharacterized LOC1201029215109883550109887133Rat
2943JunJun proto-oncogene, AP-1 transcription factor subunit5109894175109897268Rat
6494360LOC100911221uncharacterized LOC1009112215109897523109949196Rat
7593337LOC102550339uncharacterized LOC1025503395110107244110110709Rat
40929618LOC120102923uncharacterized LOC1201029235110179996110186201Rat
41402458LOC120102924uncharacterized LOC1201029245110208856110225659Rat
41145702LOC120103235U1 spliceosomal RNA5110355813110355974Rat
1359429FggyFGGY carbohydrate kinase domain containing5110398866110786019Rat
9417869LOC103692418uncharacterized LOC1036924185110605125110712729Rat
41241770LOC120102925uncharacterized LOC1201029255110819794110824522Rat
1309987Hook1hook microtubule-tethering protein 15110824501110887791Rat
6486125LOC100912642cytochrome P450 2J3-like5110908195110930402Rat
1563215Cyp2j10cytochrome P450, family 2, subfamily j, polypeptide 105110960319110995220Rat
40982088Cyp2j16-ps1cytochrome P450, family 2, subfamily j, polypeptide 16, pseudogene 15111007780111057797Rat
1561242Cyp2j16cytochrome P450, family 2, subfamily j, polypeptide 165111089438111138918Rat
620007Cyp2j4cytochrome P450, family 2, subfamily j, polypeptide 45111179981111207490Rat
631442Cyp2j3cytochrome P450, family 2, subfamily j, polypeptide 35111219921111244987Rat
11381498LOC108351103ferritin light chain 1 pseudogene5111247525111248020Rat
1560146C5h1orf87similar to human chromosome 1 open reading frame 875111342381111411576Rat
41012570LOC120103241U7 small nuclear RNA5111397995111398057Rat
41316576LOC120103249U7 small nuclear RNA5111531651111531712Rat
41245849LOC120103242U7 small nuclear RNA5111531726111531787Rat
1597743Gid8-ps1GID complex subunit 8 homolog, pseudogene 15111562436111563265Rat
1592089Tbc1d5-ps1TBC1 domain family, member 5, pseudogene 15111564652111573058Rat
40966355LOC120103290small nucleolar RNA SNORA485111718328111718474Rat
7502785LOC102553524uncharacterized LOC1025535245112230510112246625Rat
41175373LOC120103115uncharacterized LOC1201031155112244680112248682Rat
41107926LOC120103114uncharacterized LOC1201031145112416267112442856Rat
3170Nfianuclear factor I/A5112436655112781878Rat
11413852LOC108351005uncharacterized LOC1083510055112797944112805529Rat
2318487Rps18l5ribosomal protein S18-like 55112997100112997655Rat
1305442Tm2d1TM2 domain containing 15113020793113062134Rat
1565362PatjPATJ, crumbs cell polarity complex component5113061985113364807Rat
1595093L1td1LINE-1 type transposase domain containing 15113373193113386088Rat
1307635Kank4KN motif and ankyrin repeat domains 45113401491113465526Rat
41215575Usp15-ps2ubiquitin specific peptidase 15, pseudogene 25113559958113563874Rat
1306461Usp1ubiquitin specific peptidase 15113587564113598934Rat
1309790Dock7dedicator of cytokinesis 75113599371113782871Rat
1564505Angptl3angiopoietin-like 35113703007113710044Rat
40981943Rpl15-ps14ribosomal protein L15, pseudogene 145113792289113793252Rat
1598323Atg4cautophagy related 4C, cysteine peptidase5113867218113935534Rat
7514994LOC102556219uncharacterized LOC1025562195113969322113977654Rat
2318140Tomm7-ps2translocase of outer mitochondrial membrane 7, pseudogene 25114217624114218000Rat
1591391Nsmce1-ps1NSE1 homolog, SMC5-SMC6 complex component, pseudogene 15114291743114292689Rat
7645046LOC102556374uncharacterized LOC1025563745114332364114334002Rat
621715Foxd3forkhead box D35114335084114337450Rat
1308815Alg6ALG6, alpha-1,3-glucosyltransferase5114404972114454440Rat
1310044Itgb3bpintegrin subunit beta 3 binding protein5114460217114525538Rat
1561825Efcab7EF-hand calcium binding domain 75114525403114576130Rat
3316Pgm1phosphoglucomutase 15114595298114654728Rat
1559469Ror1receptor tyrosine kinase-like orphan receptor 15114744311115088155Rat
41197686Rnu6-233RNA, U6 small nuclear 2335115066080115066186Rat
41373478LOC120103197U6 spliceosomal RNA5115097451115097553Rat
1565480Ube2uubiquitin conjugating enzyme E2 U5115118234115187296Rat
1310770Cachd1cache domain containing 15115411833115637312Rat
1307610Raver2ribonucleoprotein, PTB-binding 25115700985115780465Rat
69056Jak1Janus kinase 15115780248115888841Rat
41340414LOC120103217U6 spliceosomal RNA5115816834115816936Rat
41350661LOC120103254small nucleolar RNA SNORA705115961775115961902Rat
41367836LOC120102934uncharacterized LOC1201029345115963226115977411Rat
2325348Mir101amicroRNA 101a5115966332115966406Rat
41361854Rpl9-ps16ribosomal protein L9, pseudogene 165115982278115982849Rat
2078Ak4adenylate kinase 45116039222116099064Rat
1309900Dnajc6DnaJ heat shock protein family (Hsp40) member C65116120069116283448Rat
41379665LOC120102936uncharacterized LOC1201029365116198317116217439Rat
621034Leprotleptin receptor overlapping transcript5116289843116301951Rat
3001Leprleptin receptor5116294409116477904Rat
11421297Oog3-ps1oogenesin 3, pseudogene 15116480878116483954Rat
6500251Pramef12-ps1PRAME family member 12, pseudogene 15116534373116537110Rat
1587828Pramel18PRAME like 185116594690116601043Rat
7559665Oog3l2oogenesin 3 like 25116613783116615014Rat
41346487LOC120103168uncharacterized LOC1201031685116670973116707048Rat
3280Pde4bphosphodiesterase 4B5116799819117369155Rat
9264036LOC103692427uncharacterized LOC1036924275117278306117329847Rat
7556402LOC102548249uncharacterized LOC1025482495117352521117412598Rat
1564957Sgip1SH3GL interacting endocytic adaptor 15117536752117734593Rat
1311932Dynlt5dynein light chain Tctex-type family member 55117735509117758221Rat
9390410LOC103692428small EDRK-rich factor 2 pseudogene5117764116117764318Rat
7747960Insl5insulin like 55117773104117777376Rat
1311027Dnai4dynein axonemal intermediate chain 45117787398117876216Rat
1562337Mier1MIER1 transcriptional regulator5117876012117927592Rat
1309843Slc35d1solute carrier family 35 member D15117928628117981289Rat
1562532C5h1orf141similar to human chromosome 1 open reading frame 1415118000865118064520Rat
1304821Oma1OMA1 zinc metallopeptidase5118083728118136980Rat
41284048LOC120103366small nucleolar RNA U35118248246118248345Rat
1584921Ndufs2-ps1NADH:ubiquinone oxidoreductase core subunit S2, pseudogene 15118333499118337190Rat
628770Dab1DAB adaptor protein 15118392953119513625Rat
41398222LOC120103116uncharacterized LOC1201031165118861720118905161Rat
1592786Krt18-ps5keratin 18, pseudogene 55118885696118887657Rat
9097677Prpmp5l1proline-rich protein MP5 like 15119140608119141297Rat
41247414LOC120102937uncharacterized LOC1201029375119526679119538134Rat
2239C8bcomplement C8 beta chain5119535009119572565Rat
1308355C8acomplement C8 alpha chain5119583168119637675Rat
7654450LOC102547236uncharacterized LOC1025472365119668167119673199Rat
40980304LOC120103169uncharacterized LOC1201031695119673292119674938Rat
1564074Fyb2FYN binding protein 25119677116119800911Rat
11380122Sumo2l1small ubiquitin-like modifier 25119732630119735272Rat
620893Prkaa2protein kinase AMP-activated catalytic subunit alpha 25119807992119879987Rat
41296488LOC120102939uncharacterized LOC1201029395119887232119888833Rat
620454Plpp3phospholipid phosphatase 35119927085120002206Rat
41308087LOC120102940uncharacterized LOC1201029405119967274119994416Rat
7604289LOC102549668uncharacterized LOC1025496685120006217120012535Rat
9161289LOC103692433uncharacterized LOC1036924335120344175120357630Rat
41224678LOC120103289U2 spliceosomal RNA5120473916120474106Rat
1586416Rpl32l3ribosomal protein L32 like 35120631482120632245Rat
1584843Actb-ps9actin, beta, pseudogene 95120658714120659243Rat
41364653LOC120102941uncharacterized LOC1201029415120664956120672754Rat
41134400LOC120103170uncharacterized LOC1201031705120785823120801032Rat
40988753LOC120103293small nucleolar RNA SNORA485120966305120966422Rat
7497822LOC102547167uncharacterized LOC1025471675121057292121078382Rat
1306799Usp24ubiquitin specific peptidase 245121080687121210321Rat
728909Pcsk9proprotein convertase subtilisin/kexin type 95121211278121233688Rat
621139Bsndbarttin CLCNK type accessory subunit beta5121251774121260571Rat
1584102Tmem61transmembrane protein 615121266799121276426Rat
1306529Dhcr2424-dehydrocholesterol reductase5121344552121371124Rat
40998077LOC120102943uncharacterized LOC1201029435121360322121364747Rat
1559493Cimap2ciliary microtubule associated protein 25121375998121401869Rat
1561518Ttc22tetratricopeptide repeat domain 225121401973121423130Rat
41260485LOC120102944uncharacterized LOC1201029445121408508121412443Rat
1305345Pars2prolyl-tRNA synthetase 2, mitochondrial5121433993121439158Rat
1308529Ttc4tetratricopeptide repeat domain 45121444712121462381Rat
1563440Mroh7maestro heat-like repeat family member 75121463826121509233Rat
1359194Fam151afamily with sequence similarity 151, member A5121514804121527555Rat
2324815Acot11acyl-CoA thioesterase 115121523833121581699Rat
40970507LOC120102945uncharacterized LOC1201029455121621354121625108Rat
1597473Tlcd3b-ps1TLC domain containing 3B, pseudogene 15121681560121682371Rat
41334530LOC120102946uncharacterized LOC1201029465121688135121689649Rat
621502Ssbp3single stranded DNA binding protein 35121691370121828035Rat
619820Mrpl37mitochondrial ribosomal protein L375121827892121846187Rat
1597451Cyb5rlcytochrome b5 reductase-like5121846223121868287Rat
41169774LOC120102947uncharacterized LOC1201029475121856050121859503Rat
9112029Rpl28-ps1ribosomal protein L28, pseudogene 15121868202121868751Rat
1563467Cdcp2CUB domain containing protein 25121877581121894203Rat
1359481Tceanc2transcription elongation factor A N-terminal and central domain containing 25121923959121963018Rat
40985797Trnaa-agc38transfer RNA alanine (anticodon AGC) 385121943838121943912Rat
1310313Tmem59transmembrane protein 595121962507121983625Rat
1597398Ldlrad1low density lipoprotein receptor class A domain containing 15121984245122000941Rat
1308919Lrrc42leucine rich repeat containing 425122014678122035792Rat
1596413Ift25intraflagellar transport 255122035588122062421Rat
2504Dio1iodothyronine deiodinase 15122074285122090983Rat
735206Yipf1Yip1 domain family, member 15122112144122147729Rat
1560173Ndc1NDC1 transmembrane nucleoporin5122155992122202295Rat
1308030Glis1GLIS family zinc finger 15122222155122412141Rat
7506262LOC102551042uncharacterized LOC1025510425122296655122299913Rat
41311684LOC120102948uncharacterized LOC1201029485122301858122302471Rat
1560921Dmrtb1DMRT-like family B with proline-rich C-terminal, 15122444853122452483Rat
7548488LOC102551560uncharacterized LOC1025515605122474642122476368Rat
40937057LOC120103250U7 small nuclear RNA5122542313122542380Rat
1305729Lrp8LDL receptor related protein 85122563468122635434Rat
1305174Magohmago homolog, exon junction complex subunit5122639268122646650Rat
1559786CzibCXXC motif containing zinc binding protein5122648333122657767Rat
2398Cpt2carnitine palmitoyltransferase 25122664677122682126Rat
7585186Zc3hav1-ps9zinc finger CCCH-type containing, antiviral 1, pseudogene 95122692573122699273Rat
41250028LOC120103276small nucleolar RNA SNORA2/SNORA34 family5122726968122727103Rat
1311928Slc1a7solute carrier family 1 member 75122731003122775139Rat
7545693Podnpodocan5122774536122796755Rat
41078950LOC120103223U6 spliceosomal RNA5122805182122805288Rat
3642Scp2sterol carrier protein 25122806949122881259Rat
1308525Echdc2enoyl CoA hydratase domain containing 25122915874122934860Rat
1309582Zyg11azyg-11 family member A, cell cycle regulator5122935439122973766Rat
6500146Btf3-ps13basic transcription factor 3, pseudogene 135122951278122951824Rat
1307814Zyg11bzyg-11 family member B, cell cycle regulator5122985548123042735Rat
1305274Coa7cytochrome c oxidase assembly factor 75123069356123080942Rat
1593542Shisal2ashisa like 2A5123110577123126501Rat
1306999Gpx7glutathione peroxidase 75123145151123153141Rat
41030934Rpl9-ps7ribosomal protein L9, pseudogene 75123193865123195154Rat
1310138Tut4terminal uridylyl transferase 45123201723123306582Rat
7738149LOC10255467240S ribosomal protein S27-like5123216877123218666Rat
41398365LOC120103349small nucleolar RNA SNORA405123218554123218681Rat
41104723Rnu6-67RNA, U6 small nuclear 675123280963123281069Rat
1311129Prpf38apre-mRNA processing factor 38A5123312461123324160Rat
631435Orc1origin recognition complex, subunit 15123324273123348375Rat
1306630Cc2d1bcoiled-coil and C2 domain containing 1B5123353289123367343Rat
1310856Zfyve9zinc finger FYVE-type containing 95123370677123529699Rat
41360960Rpl9-ps8ribosomal protein L9, pseudogene 85123483635123484270Rat
1311774Btf3l4basic transcription factor 3-like 45123567902123587527Rat
1305960Txndc12thioredoxin domain containing 125123587854123612886Rat
1591357Kti12KTI12 chromatin associated5123601059123602581Rat
620922Rab3bRAB3B, member RAS oncogene family5123629562123697410Rat
41302851Rnu6-304RNA, U6 small nuclear 3045123754011123754111Rat
3210Nrdcnardilysin convertase5123755807123818910Rat
2325411Mir761microRNA 7615123776534123776609Rat
1311508Osbpl9oxysterol binding protein-like 95123819106123962213Rat
41337561LOC120103121uncharacterized LOC1201031215123891920123896857Rat
1591090Calr4calreticulin 45123986870124022436Rat
11410745LOC108351012uncharacterized LOC1083510125123999719124012690Rat
1305550Eps15epidermal growth factor receptor pathway substrate 155124045865124146221Rat
1311126Ttc39atetratricopeptide repeat domain 39A5124165102124204740Rat
2321596Rnf11ring finger protein 115124212433124243125Rat
41086853Rnu4-2RNA, U4 small nuclear 25124264229124264369Rat
1591038C5h1orf185similar to human chromosome 1 open reading frame 1855124276074124295881Rat
41264577LOC120103306small nucleolar RNA SNORA175124306820124306946Rat
1584919Eno1-ps10enolase 1, pseudogene 105124325978124327290Rat
2325Cdkn2ccyclin-dependent kinase inhibitor 2C5124411123124416278Rat
70987Faf1Fas associated factor 15124426032124790014Rat
7561791Dmrta2osldoublesex and mab-3 related transcription factor like family A2, opposite strand like5124800951124807191Rat
1308173Dmrta2DMRT-like family A25124805883124811694Rat
1560027Elavl4ELAV like RNA binding protein 45125056848125200543Rat
6493177Agbl4AGBL carboxypeptidase 45125254963126534367Rat
1584958Bend5BEN domain containing 55126290648126336662Rat
628657Spata6spermatogenesis associated 65126593122126676557Rat
1311383Slc5a9solute carrier family 5 member 95126709762126733468Rat
1588696Skint8selection and upkeep of intraepithelial T cells 85126764502126773125Rat
1587579Skint1selection and upkeep of intraepithelial T cells 15126786469126814599Rat
1587570Rps4x-ps3ribosomal protein S4, X-linked, pseudogene 35126842634126843859Rat
1566327Skint2selection and upkeep of intraepithelial T cells 25126878834126909044Rat
2318761Skint4l1selection and upkeep of intraepithelial T cells 4 like 15126999449127181460Rat
1587555Zfp385b-ps1zinc finger protein 385B, pseudogene 15127270721127271910Rat
6490949Skint4selection and upkeep of intraepithelial T cells 45127320857127514355Rat
7546204Ankrd13c-ps1ankyrin repeat domain 13C, pseudogene 15127376753127380494Rat
11380980Skint5lselection and upkeep of intraepithelial T cells 5 like5127381307127435697Rat
6490490LOC100911818selection and upkeep of intraepithelial T-cells protein 10-like5127636227127678245Rat
7699232Dek-ps1DEK proto-oncogene, pseudogene 15127636795127645699Rat
1587504Skint10selection and upkeep of intraepithelial T cells 105127769022127811541Rat
41385175Traf3ip2-ps1Traf3 interacting protein 2, pseudogene 15127813498127814580Rat
1584918Eef1a1-ps9eukaryotic translation elongation factor 1 alpha 1, pseudogene 95127824597127825986Rat
1586386Trabd2bTraB domain containing 2B5127941198128158946Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10262D5Rhm31335119564714119564847Ratregion
10263D5Rhm41455119592239119592384Ratregion
10321D5Lev171235103991975103992098Ratregion
10324D5Lev191835124411616124411799Ratregion
10826D5Mgh231285109897808109897936Ratregion
10827D5Lev152925109894810109895102Ratregion
11090D5Rhm21685114659557114659726Ratregion
33804D5Mit62125117817033117817245Ratregion
33981D5Mit426659045014490450412Ratregion
34041D5Mit51445104250862104251008Ratregion
36139D5Rat271335118370674118370807Ratregion
35306D5Rat261545113558156113558310Ratregion
35545D5Rat28915120740824120740915Ratregion
37200D5Rat782455114305693114305938Ratregion
37644D5Rat1151985112419535112419733Ratregion
37680D5Rat6424159793714997937392Ratregion
37690D5Rat9223859559615095596396Ratregion
37772DXRat532795103857355103857402Ratregion
37944D5Rat831695119385986119386155Ratregion
37950D5Rat95995124048559124048658Ratregion
36667D5Rat542635120182440120182703Ratregion
36687D5Rat251885113060909113061097Ratregion
35074D5Rat231995102084761102084960Ratregion
35577D5Rat2116459511206595112231Ratregion
35771D5Rat2216559757016597570330Ratregion
35785D5Rat242965101278414101278701Ratregion
35961D5Rat5318559921653999216724Ratregion
39796D5Rat15023659607117596071342Ratregion
39952D5Rat1582005119085612119085810Ratregion
38156D5Rat1012155116021949116022166Ratregion
38308D5Rat10712159040530290405423Ratregion
38338D5Rat1081855128033842128034027Ratregion
40384D5Rat18313059628554396285673Ratregion
40548D5Rat1551505110589458110589608Ratregion
40574D5Rat19613659948599799486133Ratregion
38508D5Rat602445101467719101467963Ratregion
40018D5Rat1652035127746389127746592Ratregion
40138D5Rat1601375122994775122994914Ratregion
40176D5Rat1631285123045178123045306Ratregion
38848D5Rat8824859528829395288541Ratregion
39066D5Rat712125109967940109968152Ratregion
39078D5Rat962245119429867119430093Ratregion
39092D5Rat652125125037723125037935Ratregion
39224D5Rat9820559577419495774399Ratregion
39248D5Rat722285114973303114973531Ratregion
39378D5Rat14919859705976097059958Ratregion
42750D5Rat23123659988536199885595Ratregion
42751D5Rat2322425114305693114305935Ratregion
42752D5Rat2332485118714244118714492Ratregion
42754D5Rat1981545119536444119536604Ratregion
42755D5Rat2592155120368789120369004Ratregion
41192D5Rat1522265102816790102817014Ratregion
41408D5Rat1621515120167910120168061Ratregion
41424D5Rat1561705110265888110266058Ratregion
42319D5Rat2562405108938288108938528Ratregion
41560D5Rat1531635103689353103689768Ratregion
41560D5Rat1531635103689674103690167Ratregion
41560D5Rat1531635103689997103690167Ratregion
41576D5Rat15115959975354899753708Ratregion
41678D5Rat1971535112426055112426208Ratregion
41776D5Rat21120759161836791618574Ratregion
44552D9Wox211365109552936109552993Ratregion
44552D9Wox211365125373973125374029Ratregion
44552D9Wox211365126986761126986815Ratregion
43928D5Wox312359485897294859095Ratregion
43929D5Got12823659682413896824374Ratregion
43930D5Wox418259860287098603051Ratregion
43932D5Got12914959961461499614763Ratregion
43934D5Got301335100749175100749308Ratregion
43935D5Got281395101660429101660568Ratregion
43936D5Got1311535101112265101112414Ratregion
43940D5Got271705104607788104607958Ratregion
43942D5Got331355110075805110075940Ratregion
43943D5Got361265109141749109141875Ratregion
43944D5Wox182685112450727112450995Ratregion
43945D5Got391855112936348112936533Ratregion
43948D5Got381475112393083112393230Ratregion
43949D5Got1331865113505602113505790Ratregion
43951D5Got371545114165957114166111Ratregion
43952D5Got452735125267791125268064Ratregion
43954D5Got471855124456846124457033Ratregion
43959D5Got1342305124129411124129641Ratregion
43960D5Got442775123783115123783392Ratregion
43961D5Got532735121550838121551111Ratregion
45054D13Got229459354117093542503Ratregion
60479D5Got2413259145437491454506Ratregion
60480D5Got251235106732222106732345Ratregion
60481D5Got312325101703657101703889Ratregion
60482D5Got322125117744887117745099Ratregion
60483D5Got342775111548415111548692Ratregion
60484D5Got351605111564698111564858Ratregion
60485D5Got421815124160767124160948Ratregion
60486D5Got431455124299554124299701Ratregion
60487D5Got462895124074311124074597Ratregion
60488D5Got481845123142871123143055Ratregion
60808D5Wox251475109050865109051012Ratregion
69515D5Uwm231845101607489101607673Ratregion
69519D5Uwm251865101387969101388153Ratregion
69521D5Uwm261415101847538101847681Ratregion
69523D5Uwm271655103005080103005247Ratregion
69525D5Uwm281385105629979105630117Ratregion
69527D5Uwm292635109719127109719390Ratregion
69547D5Uwm301885115439450115439638Ratregion
69558D5Uwm341665124153416124153572Ratregion
69567D5Uwm371715123935167123935338Ratregion
62483D5Uia11895123388476123388665Ratregion
62484D5Uia21335105221933105222066Ratregion
66410D5Mco31345121352214121352347Ratregion
66444D5Uia123775107521767107522145Ratregion
629614D5Hmgc11685101374078101374246Ratregion
67361D5Arb172445109897663109897907Ratregion
67768D5Uwm212059661487496614994Ratregion
1630121D5Got3042445122224547122224791Ratregion
1631883D5Got2451045117534427117534531Ratregion
1631934D5Got28722359099380990994032Ratregion
1632130D5Got26712159825660098256721Ratregion
1626716D5Rhw111775116758053116758230Ratregion
1626718D5Rhw211925116967554116967746Ratregion
1626720D5Rhw221605116975112116975270Ratregion
1626724D5Rhw101835116748741116748924Ratregion
1626726D5Rhw72065116653633116653839Ratregion
1626728D5Rhw182295116909826116910055Ratregion
1626734D5Rhw81905116668797116668989Ratregion
1626736D5Rhw152365116821291116821529Ratregion
1626738D5Rhw52195116520024116520243Ratregion
1626740D5Rhw141615116799321116799482Ratregion
1626742D5Rhw91795116741307116741486Ratregion
1626744D5Rhw201575116958954116959109Ratregion
1626746D5Rhw41635116480095116480258Ratregion
1626750D5Rhw171965116900099116900295Ratregion
1626754D5Rhw122025116763310116763512Ratregion
1626756D5Rhw22045116215221116215425Ratregion
1626760D5Rhw191565116944810116944966Ratregion
1626770D5Rhw31675116259680116259847Ratregion
1626774D5Rhw12105116206626116206836Ratregion
1626776D5Rhw131915116795765116795958Ratregion
1626780D5Rhw161905116844944116845134Ratregion
1627041Cpt22535122667705122667958Ratregion
1627311Pde4b2005116993488116993688Ratregion
1627439Nrd12595123755052123755311Ratregion
1627770D5Wox411745101502201101502377Ratregion
1628979D5Wox381815116360112116360293Ratregion
1629201D5Got30210359795059497950697Ratregion
1629468D5Got1322955115813691115813986Ratregion
1629713D5Got2441445113426023113426167Ratregion
1629848D5Got2919459733135197331445Ratregion
1639671D5Got2471825119393552119393734Ratregion
1632630D5Got23816659120129891201464Ratregion
1633607D5Got2481985120656816120657014Ratregion
1639895D5Got2461515117177749117177900Ratregion
1640190D5Got31226459579395095794214Ratregion
1640622D5Got3112495114773489114773738Ratregion
1635541D5Got2421325111179889111180021Ratregion
1635885D5Got2431275107474818107474945Ratregion
1636554D5Got25418359219051992190702Ratregion
1636896D5Got25621959586086995861088Ratregion
1633869D5Got2579859828456498284662Ratregion
1634204D5Wox391485116368606116368754Ratregion
1634628D5Got2411955100113215100113410Ratregion
2300293D5Rhw232115116292445116292656Ratregion
2315222D16Nkg703195108885691108885972Ratregion
7777093D5Mco581625125222967125223129Ratregion
7794805D5Mco412135117913475117913688Ratregion
7794807D5Mco422275116047089116047316Ratregion
7794818D5Mco472185112175328112175546Ratregion
7192368Elavl2665105963428105963494Ratregion
7365003rs6578575005101612333101612333Ratregion
7365007rs10513324505106874439106874439Ratregion
7206270Mysm16175109793011109793628Ratregion
7206462Slc5a97335126709844126710577Ratregion
5035755D1S30211115119513438119513549Ratregion
5035763D9S201212659675922396759349Ratregion
5035853PMC240671P13825120658784120659043Ratregion
5035863PMC25763P11555117367073117367228Ratregion
5038622AU0224662045124022072124022276Ratregion
5038624AA959731985124789846124789944Ratregion
5038626AI5271411345124791424124791558Ratregion
5035971PMC337033P12255105962737105962962Ratregion
5035971PMC337033P12255105962737105963351Ratregion
5035971PMC337033P12255105962787105962962Ratregion
5036069Actb-rs12885120658727120659015Ratregion
5036097UniSTS:1412181755102623667102623851Ratregion
7206256Olfm1845113761244113761328Ratregion
7206532UniSTS:5469209045121436263121437167Ratregion
7206572UniSTS:54709010355117934873117935908Ratregion
7206592Dmrta216095124808216124809825Ratregion
5036221D4Bwg0951e12859540930895409436Ratregion
5036380Jun4265109896604109897030Ratregion
5039140RH1275351875103766729103766916Ratregion
5036653AU0487272335111945494111945729Ratregion
5036895AU0495451565125864606125864762Ratregion
5031226PMC104029P14525120658192120658630Ratregion
5031232PMC108483P14735120658748120659098Ratregion
5031260PMC117781P14665120658755120659098Ratregion
5031280PMC125345P14735120658748120659098Ratregion
5031294PMC129043P12915109897364109897655Ratregion
5031304PMC133829P14735120658748120659098Ratregion
5033877RH1404521655101169318101169483Ratregion
5028681RH80440905112513923112514012Ratregion
5031478AU0481911105100713273100713383Ratregion
5031500AU04811920059257105992571259Ratregion
5034031RH1410931855123366930123367115Ratregion
5034083RH1412992125122834610122834822Ratregion
5026184RH1312392105121211277121211487Ratregion
5026198RH1312932185113710616113710834Ratregion
5028819RH1424501695119813371119813540Ratregion
5028829RH1424871465122202133122202279Ratregion
5028853RH1425801155120006220120006335Ratregion
5031640AU04764615559702564597025900Ratregion
5031640AU04764615559702574597025900Ratregion
5034289RH1420791995113362916113363115Ratregion
5028927RH1428512445113046670113046914Ratregion
5029021RH1432161085113364282113364390Ratregion
5031720AU0473711035101621882101621985Ratregion
5031802AU0470991945114075177114075371Ratregion
5031922AU0466961635121770462121770625Ratregion
5029379RH1445711595112416310112416469Ratregion
5032109RH94433975103020870103020967Ratregion
5034698AI70391721659024019690240412Ratregion
5034826AA9437361545121983120121983274Ratregion
5029494D5Lev327759788098097881257Ratregion
5032261AV0779788259540931095409391Ratregion
5032361AI12049013159982813699828474Ratregion
5032361AI12049013159982834399828474Ratregion
5035106AFM324zg9059518271695183352Ratregion
5035154AI0102541715115637807115637978Ratregion
5027073D1S34192575112776883112777140Ratregion
5029643BF3865221515113597258113597409Ratregion
5029665BF3867891955114594795114594990Ratregion
5029681BF4191781205121405345121405465Ratregion
5029705BI2902618085110218661110219469Ratregion
5035338BM3864221555102106356102106511Ratregion
5035410AI0076031925101505317101505509Ratregion
5027091STS-Z40052525121828984121829036Ratregion
5029783BF3872631735117757387117757560Ratregion
5029887BE0974042125124042150124042362Ratregion
5027261AI5056521465127378841127378987Ratregion
5027273AI875733815123818425123818506Ratregion
5027421AI988026905127469769127469859Ratregion
5029923BE09784221959026354490263763Ratregion
5030205BF40179619259933570999335901Ratregion
5024988AU02201222259784702797847249Ratregion
5024990RH1267532235121208167121208390Ratregion
5024992BB464020855125057610125057695Ratregion
5030281BE10522915059783946097839610Ratregion
5030351AW53341816059826876798268927Ratregion
502786315.MMHAP53FRE9.seq2095101174343101174552Ratregion
5033307RH13835315759578234695782503Ratregion
5025294RH1277682025123787773123787975Ratregion
5025424RH1282621915102623675102623875Ratregion
502793135.MMHAP28FLD5.seq1825109001682109001863Ratregion
502795542.MMHAP10FF6.seq1805126675705126675885Ratregion
5028029MHAa43g3.seq1055109077085109077190Ratregion
5030587BE1135502115117954990117955200Ratregion
5033361RH1385511205121983414121983534Ratregion
5025502RH1285682125123612458123612670Ratregion
5030775AW5351851535104009899104010052Ratregion
5030793AW5290751655122444893122445058Ratregion
5030817BE1203321555115420521115420676Ratregion
5033567RH1392971715102402584102402755Ratregion
5033591RH1393867259753338597533457Ratregion
5025678RH1292372195121370904121371123Ratregion
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5135467D5Uwm711465126673617126673763Ratregion
5135469D5Uwm722425125008980125009222Ratregion
5502701C1orf1651175126329451126329568Ratregion
5503196mActb05120658368120658774Ratregion
5503958UniSTS:2569462675109895884109896151Ratregion
5504068px-5c81565125426959125427115Ratregion
5507643Dio15835122091100122091683Ratregion
5503680ELAVL2__75779485105962550105963498Ratregion
5503845Nmt12795103658564103658845Ratregion
5504010px-21e121355106315971106316106Ratregion
5503992Dmrtb105122447528122448797Ratregion
5504626PMC316663P32395104015134104015373Ratregion
5508206D5Uwm732345124400291124400525Ratregion
5504336D11S27838205107370493107371313Ratregion
5504849ha25056535120716698120717351Ratregion
5504859ha253105114606869114607662Ratregion
5506246UniSTS:50244205117970947117971573Ratregion
5506234Ndufs21215118333343118333464Ratregion
5506715SCP2965122868632122868728Ratregion
5506873G4707122259981947399819695Ratregion
5507117UniSTS:22460315959895565698955815Ratregion
5499851UniSTS:2349962235123367012123367235Ratregion
5501398Mpdz059587464695875800Ratregion
5500262D1S2299E875125058161125058248Ratregion
5499843UniSTS:2349692875113335953113336240Ratregion
5499845UniSTS:2349673385113385613113385951Ratregion
5500515RH135495975113703231113703328Ratregion
5500368GDB:3526881095119547438119547547Ratregion
5501179PMC152255P11485103991982103992130Ratregion
5501205PMC153970P11555109895405109895561Ratregion
5501127PMC141153P12715124415101124415371Ratregion
5501131PMC141153P23365124411869124412205Ratregion
5504698PMC55707P110055109895405109896410Ratregion
5504926Nfib5259696342296963474Ratregion
5505275Elavl24705105962786105963428Ratregion
5505275Elavl24705105962958105963428Ratregion
5506509AL0093641495113751250113751399Ratregion
5501940MARC_17865-17866:1025013775:148759676516596765652Ratregion
5502224G64294150359248199492483497Ratregion
5502311RH1243872305101369255101369485Ratregion
5502321RH12445215059432170494321854Ratregion
5502355RH1245661025117703291117703393Ratregion
5502405RH1247451585124789789124789947Ratregion
6480632D5Uwm741575127833594127833751Ratregion
6480634D5Uwm754975124712419124712918Ratregion
11528623rs1056922315126768268126768268Ratregion
11528621rs1986519875125309350125309350Ratregion
11528622rs1974342915124399325124399325Ratregion
Position Markers

Flank 1: (D5Rat77)
Rat AssemblyChrPosition (strand)Source
Celera575,995,687 - 75,995,806UniSTS
SHRSP x BN Map543.4999UniSTS
SHRSP x BN Map543.4999RGD
Peak: (D5Wox25)
Rat AssemblyChrPosition (strand)Source
GRCr85114,166,606 - 114,166,753 (+)Marker Load Pipeline
mRatBN7.25109,050,865 - 109,051,012 (+)MAPPER
Rnor_6.05113,175,505 - 113,175,651NCBI
Rnor_5.05117,118,034 - 117,118,180UniSTS
RGSC_v3.45114,478,132 - 114,478,279RGD
RGSC_v3.45114,478,133 - 114,478,279UniSTS
RGSC_v3.15114,483,359 - 114,483,505RGD
Celera5107,687,340 - 107,687,496UniSTS
RH 3.4 Map5777.5RGD
RH 3.4 Map5777.5UniSTS
Flank 2: (D5Rat108)
Rat AssemblyChrPosition (strand)Source
GRCr85133,270,647 - 133,270,832 (+)Marker Load Pipeline
mRatBN7.25128,033,842 - 128,034,027 (+)MAPPER
Rnor_6.05133,313,668 - 133,313,852NCBI
Rnor_5.05137,107,818 - 137,108,002UniSTS
RGSC_v3.45134,871,897 - 134,872,385RGD
RGSC_v3.45134,871,902 - 134,872,086UniSTS
RGSC_v3.15134,877,128 - 134,877,312RGD
Celera5126,688,474 - 126,688,658UniSTS
RH 3.4 Map5828.8UniSTS
RH 3.4 Map5828.8RGD
RH 2.0 Map5776.9RGD
SHRSP x BN Map566.0999RGD
Cytogenetic Map5q35UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5111416838156416838Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)579584860124584860Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5125392826139989768Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
2302381Bw84Body weight QTL 844.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
1582230Bw78Body weight QTL 783.20.0016epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)5119085612128034027Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)579584860124584860Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5127798274166875058Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
7411561Bw134Body weight QTL 134240.001body mass (VT:0001259)body weight gain (CMO:0000420)54946360094463600Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5106906205151906205Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)597570330136479578Rat
1582212Livw2Liver weight QTL 23.50.0004liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)599016066119085810Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)587468046132468046Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)5108938288153938288Rat
11528624Bss114Bone structure and strength QTL 1146.543e-07femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5124399325126768268Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5105999803150999803Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5120740824151018848Rat
1358909Kidm25Kidney mass QTL 251.87kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)590067849128034027Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)5103689353148689353Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5106906205151906205Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5111416838156416838Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5106906205151906205Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)555715622100715622Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5111416838156416838Rat
9589025Epfw7Epididymal fat weight QTL 720.660.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)54946360094463600Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)584132602129132602Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)566174080124160948Rat
2316954Rf57Renal function QTL 570kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)55979352890450144Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5108845856153845856Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)558829236128034027Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)534944474113558310Rat
1358889Bp261Blood pressure QTL 2612.86arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)590067849128034027Rat
2316957Pur21Proteinuria QTL 216.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)559793528113558156Rat
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)568984307104251008Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)597059760147465714Rat
7794743Bp373Blood pressure QTL 3730.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5112175546116047089Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
61380Edpm5Estrogen-dependent pituitary mass QTL 54.50.92pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)568984307104251008Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
7794739Bp372Blood pressure QTL 3720.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5117913688125222967Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)56029343498603051Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
1331782Rf36Renal function QTL 363.296kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)58384059897059958Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5106906205151906205Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5106906205151906205Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5121846814166846814Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5128033842133011550Rat
2303615Vencon7Ventilatory control QTL 70.001respiration trait (VT:0001943)respiration rate (CMO:0000289)55098389595983895Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5120740824143608494Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
7394708Emca11Estrogen-induced mammary cancer QTL 11mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)599753548113061097Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)534730116104251008Rat
1598846Bp293Blood pressure QTL 2933.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)579584860124584860Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5124160767133749643Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5108845856153845856Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
631527Tls1T-lymphoma susceptibility QTL 100.001thymus integrity trait (VT:0010555)post-insult time to onset of T-cell lymphoma (CMO:0001907)590450144135450144Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5111416838156416838Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)569540295151018848Rat
1600362Mcs19Mammary carcinoma susceptibility QTL 192.5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)599485997103690167Rat
2303574Gluco42Glucose level QTL 422blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)55349671998496719Rat
2290005Mcs24Mammary carcinoma susceptibility QTL 24mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)564719390109719390Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5127798274166875058Rat
2312671Scl64Serum cholesterol level QTL 640.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)568984307104251008Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)587765973132765973Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)599216724148607142Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general QTL detected in F2 males 1303386
qtl_statistics_details QTL linkage only suggestive after renin-angiotensisin system block (LOD=1.80); QTL linkage is not detected after SNS or NO system blocks 1303386
qtl_statistics_details QTL mapping was carried out with the Map Manager QT program and is consistent with results obtained through one way analysis of variance (ANOVA) testing 1303386