Bw113 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bw113 (Body weight QTL 113) Rattus norvegicus

Symbol: Bw113
Name: Body weight QTL 113
RGD ID: 6903316
Trait: body mass   (VT:0001259)    
Measurement Type: body weight   (CMO:0000012)    
LOD Score: 2.0
P Value: 0.0103
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2587,765,973 - 132,765,973RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0591,884,213 - 136,884,213RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0595,828,682 - 140,828,682RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4593,245,548 - 138,245,548RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: LEW HTG 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
Metabolic Syndrome  (IAGP)
obesity  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement
body weight  (IDA)

Experimental Condition

Measurement Method

Vertebrate Trait
body mass  (IDA)

Rat Strain
HTG  (IEA)
LEW  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Rat model of familial combined hyperlipidemia as a result of comparative mapping. Ueno T, etal., Physiol Genomics 2004 Mar 12;17(1):38-47. Epub 2004 Jan 6.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1304802Frmd3FERM domain containing 358776475588031091Rat
11381374LOC108350987COMM domain-containing protein 2 pseudogene58802717288030854Rat
1562410Dppa3-ps2developmental pluripotency-associated 3, pseudogene 258809741888098963Rat
1307528Kdm4clysine demethylase 4C58810071088306821Rat
1589969Rpl9-ps24ribosomal protein L9, pseudogene 2458836086588361547Rat
41155933LOC120103302small nucleolar RNA SNORA1758857255288572680Rat
1589947Vom2r-ps76vomeronasal 2 receptor, pseudogene 7658869625688791737Rat
1309148Dmac1distal membrane arm assembly component 158924117389243793Rat
1589924Eef1g-ps16eukaryotic translation elongation factor 1 gamma, pseudogene 1658926144489263004Rat
2324835Mdh2-ps1malate dehydrogenase 2, pseudogene 158998218289984494Rat
1561090Ptprdprotein tyrosine phosphatase, receptor type, D59004699390698977Rat
41025543LOC120103209U6 spliceosomal RNA59060509090605193Rat
41013620Cog5-ps1component of oligomeric golgi complex 5, pseudogene 159064539790816683Rat
41344762Drg1-ps2developmentally regulated GTP binding protein 1, pseudogene 259089386490972201Rat
41309747LOC120103065uncharacterized LOC12010306559097382590991561Rat
1561090Ptprdprotein tyrosine phosphatase, receptor type, D59112235491641754Rat
7703644Ptprdlprotein tyrosine phosphatase, receptor type, D like59236841092380389Rat
41085030Zcchc9-ps3zinc finger CCHC-type containing 9, pseudogene 359239049992406353Rat
7558064LOC102555405uncharacterized LOC10255540559296352893021460Rat
1586073Ccdc47-ps1coiled-coil domain containing 47, pseudogene 159302161393023608Rat
41142637LOC120103155uncharacterized LOC12010315559306583793073188Rat
7746436LOC102555669uncharacterized LOC10255566959307964493197365Rat
2320392Pwp1-ps1PWP1 homolog, endonuclein, pseudogene 159323345393237397Rat
1563375Snrpn-ps4small nuclear ribonucleoprotein polypeptide N, pseudogene 459364967993650898Rat
9120358Hmgn4-ps6high mobility group nucleosomal binding domain 4, pseudogene 659405577094062563Rat
1587537Akr1b8-ps3aldo-keto reductase family 1, member B8, pseudogene 359428666894291222Rat
1587526Dkc1-ps3dyskerin pseudouridine synthase 1, pseudogene 359432124594322841Rat
1564021Rpl31-ps1ribosomal protein L31, pseudogene 159494831294948698Rat
41322042Fth1-ps2ferritin heavy chain 1, pseudogene 259508626195087200Rat
1586398Hpf1-ps1histone PARylation factor 1, pseudogene 159519946895200056Rat
41168764LOC120103291small nucleolar RNA SNORA4859520289795203037Rat
1593266Tyrp1tyrosinase-related protein 159528098295299516Rat
7509921LOC102556039uncharacterized LOC10255603959528349895314373Rat
1308059Lurap1lleucine rich adaptor protein 1-like59536200595409439Rat
1565987Fbxl18l1F-box and leucine-rich repeat protein 18 like 159546048095464873Rat
40972972LOC120102902protein PRRC2C-like59555314795562018Rat
11458786LOC108350991uncharacterized LOC10835099159566871795710953Rat
3105Mpdzmultiple PDZ domain crumbs cell polarity complex component59576611295920531Rat
40971150LOC120103321small nucleolar RNA SNORA1759583074095830865Rat
41044958LOC120103373U4 spliceosomal RNA59625456696254697Rat
41332442LOC120103156uncharacterized LOC12010315659638721896389315Rat
62015Nfibnuclear factor I/B59675920896974001Rat
6497980LOC100910558uncharacterized LOC10091055859697618197014187Rat
7694123LOC102551858uncharacterized LOC10255185859706604597072072Rat
11475977Trnah-gug10transfer RNA histidine (anticodon GUG) 1059708722797087298Rat
9408812LOC103692393uncharacterized LOC10369239359716511397170168Rat
1305750Zdhhc21zinc finger DHHC-type palmitoyltransferase 2159722762197286866Rat
1563046Cer1cerberus 1, DAN family BMP antagonist59730642797309783Rat
1306981Frem1Fras1 related extracellular matrix 159732126697469523Rat
7670779Dbf4-ps1DBF4 zinc finger, pseudogene 159742126497424352Rat
41016107LOC120103348small nucleolar RNA SNORA1759748166497481780Rat
7743271LOC102552278uncharacterized LOC10255227859751279797520488Rat
1305797Ttc39btetratricopeptide repeat domain 39B59760332997708103Rat
1586071Rps12-ps5ribosomal protein S12, pseudogene59773158297731984Rat
11405418Rps29-ps11ribosomal protein S29, pseudogene 1159776436997764539Rat
11499899LOC10835110140S ribosomal protein S17 pseudogene59779048697794517Rat
1583986Nsa2-ps12NSA2 ribosome biogenesis factor, pseudogene 1259780175197802605Rat
1305172Snapc3small nuclear RNA activating complex, polypeptide 359781782797868494Rat
631439Psip1PC4 and SRSF1 interacting protein 159784701097879280Rat
41129082Psip1lPC4 and SRSF1 interacting protein 1 like59787877297883186Rat
1560884Ccdc171coiled-coil domain containing 17159791996598403853Rat
40957686LOC120102904ladinin-1-like59825993498274752Rat
40974238LOC120103188U6 spliceosomal RNA59841452898414634Rat
11474955LOC108350993uncharacterized LOC10835099359847835098487366Rat
1310694Bnc2basonuclin zinc finger protein 259867907199016044Rat
41379561LOC120103247U7 small nuclear RNA59922995599230058Rat
9071259LOC103692399uncharacterized LOC10369239959925428299256197Rat
1308101Cntlncentlein59929586599576402Rat
1585925Ppia-ps11peptidylprolyl isomerase A, pseudogene 1159961185299612369Rat
620276Sh3gl2SH3 domain containing GRB2 like 2, endophilin A159965318999827500Rat
41170419Pgam1-ps6phosphoglycerate mutase 1, pseudogene 659968598999686573Rat
1306439Adamtsl1ADAMTS-like 1599964406100919786Rat
1583685Saxo1stabilizer of axonemal microtubules 15100937134101093308Rat
619804RragaRas-related GTP binding A5101113341101114936Rat
15203474Haus6HAUS augmin like complex subunit 65101116532101156396Rat
41394140Scarna8small Cajal body-specific RNA 85101124125101124255Rat
728889Plin2perilipin 25101156648101211738Rat
7660377LOC102547623uncharacterized LOC1025476235101226928101245243Rat
1308489Dennd4cDENN domain containing 4C5101272298101369529Rat
3602Rps6ribosomal protein S65101371716101374576Rat
1304629Acer2alkaline ceramidase 25101391830101442615Rat
628650Slc24a2solute carrier family 24 member 25101497916101741840Rat
11459931LOC108350995uncharacterized LOC1083509955102119628102128446Rat
620940Mllt3MLLT3, super elongation complex subunit5102259075102515447Rat
41316176LOC120103312small nucleolar RNA SNORA175102483194102483318Rat
1311849Focadfocadhesin5102564560102886587Rat
1310339Hacd43-hydroxyacyl-CoA dehydratase 45102887597102915376Rat
2865Ifnb1interferon beta 15103020758103021595Rat
1306334Ifna4interferon, alpha 45103069174103070120Rat
1306135Ifna1interferon, alpha 15103097356103097925Rat
1589875Ifna7l-ps1interferon, alpha 7 like, pseudogene 15103104672103105585Rat
41171666LOC120103203U6 spliceosomal RNA5103109366103109474Rat
1561246Ifna1l1interferon, alpha 1 like 15103144515103145269Rat
1359312Ifna5interferon, alpha 55103187852103188430Rat
1561827Ifna2l1interferon alpha 2 like 15103196737103197803Rat
1565225Ifna16l1interferon, alpha 16-like 15103216368103216984Rat
6487214LOC100912356interferon alpha-1-like5103227820103230500Rat
1311425Ifna2interferon alpha 25103258617103259195Rat
6502836LOC100909643interferon alpha-1-like5103273737103275988Rat
6487699LOC100912314interferon alpha-1-like5103285510103288640Rat
1559679Ifna4l2interferon, alpha 4 like 25103305221103305862Rat
41029367Rpl27a-ps12ribosomal protein L27a, pseudogene 125103328721103329166Rat
1304814Klhl9kelch-like family member 95103333747103337931Rat
1591738Rps24-ps10ribosomal protein S24, pseudogene 105103343786103344309Rat
41279671LOC120103158interferon alpha-12-like5103378576103379147Rat
41164037LOC120103159interferon alpha-12-like5103407135103407884Rat
41162071LOC120103160interferon alpha-12-like5103426092103427016Rat
41097131LOC120103161interferon alpha-12-like5103441204103442180Rat
40975974LOC120103162interferon alpha-1-like5103455380103455934Rat
1560539Ifna12linterferon alpha 12 like5103476362103477427Rat
41024711LOC120103163interferon alpha-12-like5103494442103495077Rat
41140167LOC120103164interferon alpha-12-like5103509610103510260Rat
6492384Ifna4l1interferon, alpha 4 like 15103524733103525302Rat
41074433LOC120103372U4 spliceosomal RNA5103532146103532302Rat
1565065Ifneinterferon, epsilon5103571630103572290Rat
329845494LOC130062807uncharacterized LOC1300628075103598328103627530Rat
4888605Mir3554microRNA 35545103599032103599149Rat
2325391Mir31microRNA 315103599038103599143Rat
329845392LOC130062808uncharacterized LOC1300628085103627694103629756Rat
1583723Nmt1-ps1N-myristoyltransferase 1, pseudogene 15103658873103662295Rat
11413299LOC108350998uncharacterized LOC1083509985103757997103779881Rat
2318341C5h9orf85similar to human chromosome 9 open reading frame 855103767094103767986Rat
1310114Mtapmethylthioadenosine phosphorylase5103874460103920684Rat
41034517Gskip-ps1GSK3B interacting protein, pseudogene 15103941903103943310Rat
2323Cdkn2acyclin-dependent kinase inhibitor 2A5103984949103992143Rat
2324Cdkn2bcyclin-dependent kinase inhibitor 2B5104009839104019082Rat
7697358LOC102552523uncharacterized LOC1025525235104019105104127037Rat
1588220Hspd1-ps14heat shock protein family D (Hsp60) member 1, pseudogene 145104129384104131678Rat
41260363LOC120102910uncharacterized LOC1201029105104171383104185974Rat
9404082LOC103692411uncharacterized LOC1036924115104410856104415793Rat
1309796Dmrta1DMRT-like family A15104415893104422433Rat
1584925Lmntd1-ps1lamin tail domain containing 1, pseudogene 15104595779104597302Rat
1560729Rps24-ps18ribosomal protein S24, pseudogene 185104729321104730083Rat
1563227Zfp352zinc finger protein 3525104946243104948087Rat
1310095Zfp353zinc finger protein 3535105075075105076667Rat
1583722Eef1g-ps13eukaryotic translation elongation factor 1 gamma, pseudogene 135105085925105111382Rat
1585888Vdac1-ps2voltage-dependent anion channel 1, pseudogene 25105313273105321698Rat
41388855Rnu6-698RNA, U6 small nuclear 6985105346075105346181Rat
6498356Ktn1-ps1kinectin 1, pseudogene 15105565480105575498Rat
41255483Ppia-ps8peptidylprolyl isomerase A, pseudogene 85105600882105603060Rat
41097241LOC120103318small nucleolar RNA SNORA175105738478105738609Rat
1584923Rps7-ps19ribosomal protein S7, pseudogene 195105902114105902692Rat
628611Elavl2ELAV like RNA binding protein 25105960872106086463Rat
41069231LOC120103166uncharacterized LOC1201031665106108110106109796Rat
41143086LOC120103387U6 spliceosomal RNA5106129987106130093Rat
7592700LOC102554351uncharacterized LOC1025543515106358753106371776Rat
6498231Hspd1-ps33heat shock protein family D (Hsp60) member 1, pseudogene 335106398781106403426Rat
2324467Izumo3IZUMO family member 35106874321106876978Rat
11416818LOC108351001uncharacterized LOC1083510015106877052106903186Rat
1560983Hnrnpa1-ps24heterogeneous nuclear ribonucleoprotein A1, pseudogene 245106906066106907230Rat
2323226Spcs2-ps1signal peptidase complex subunit 2, pseudogene 15106913633106915036Rat
1583529Cks1lCDC28 protein kinase regulatory subunit 1-like5106982443106983182Rat
1561150Hspd1l2heat shock protein family D (Hsp60) member 1 like 25107131587107131895Rat
41136247Rpl5-ps11ribosomal protein L5, pseudogene 115107212048107217257Rat
41394794LOC120103236U6 spliceosomal RNA5107652473107652571Rat
1592090Snu13-ps4small nuclear ribonucleoprotein 13, pseudogene 45107912017107912407Rat
41074883Tusc1tumor suppressor candidate 15108089952108091315Rat
7543605LOC102546952uncharacterized LOC1025469525108270998108359486Rat
41358010Rpl19-ps7ribosomal protein L19, pseudogene 75108333257108335787Rat
9284656LOC103692415uncharacterized LOC1036924155108723428108734153Rat
41215040LOC120102919uncharacterized LOC1201029195108831467108907138Rat
1560251Caap1caspase activity and apoptosis inhibitor 15109313253109414323Rat
40937684LOC120102920uncharacterized LOC1201029205109330329109338769Rat
621245Plaaphospholipase A2, activating protein5109428600109460373Rat
1359704Ift74intraflagellar transport 745109460372109563839Rat
1591722Lrrc19leucine rich repeat containing 195109494891109507948Rat
2325363Mir872microRNA 8725109539086109539166Rat
620980TekTEK receptor tyrosine kinase5109607077109733805Rat
1563332Eqtnequatorin5109734495109762048Rat
1311787Mysm1myb-like, SWIRM and MPN domains 15109761345109826652Rat
40989424LOC120103252small nucleolar RNA SNORA705109807447109807582Rat
41394229LOC120102921uncharacterized LOC1201029215109883550109887133Rat
2943JunJun proto-oncogene, AP-1 transcription factor subunit5109894175109897268Rat
6494360LOC100911221uncharacterized LOC1009112215109897523109949196Rat
7593337LOC102550339uncharacterized LOC1025503395110107244110110709Rat
40929618LOC120102923uncharacterized LOC1201029235110179996110186201Rat
41402458LOC120102924uncharacterized LOC1201029245110208856110225659Rat
41145702LOC120103235U1 spliceosomal RNA5110355813110355974Rat
1359429FggyFGGY carbohydrate kinase domain containing5110398866110786019Rat
9417869LOC103692418uncharacterized LOC1036924185110605125110712729Rat
41241770LOC120102925uncharacterized LOC1201029255110819794110824522Rat
1309987Hook1hook microtubule-tethering protein 15110824501110887791Rat
6486125LOC100912642cytochrome P450 2J3-like5110908195110930402Rat
1563215Cyp2j10cytochrome P450, family 2, subfamily j, polypeptide 105110960319110995220Rat
40982088Cyp2j16-ps1cytochrome P450, family 2, subfamily j, polypeptide 16, pseudogene 15111007780111057797Rat
1561242Cyp2j16cytochrome P450, family 2, subfamily j, polypeptide 165111089438111138918Rat
620007Cyp2j4cytochrome P450, family 2, subfamily j, polypeptide 45111179981111207490Rat
631442Cyp2j3cytochrome P450, family 2, subfamily j, polypeptide 35111219921111244987Rat
11381498LOC108351103ferritin light chain 1 pseudogene5111247525111248020Rat
1560146C5h1orf87similar to human chromosome 1 open reading frame 875111342381111411576Rat
41012570LOC120103241U7 small nuclear RNA5111397995111398057Rat
41316576LOC120103249U7 small nuclear RNA5111531651111531712Rat
41245849LOC120103242U7 small nuclear RNA5111531726111531787Rat
1597743Gid8-ps1GID complex subunit 8 homolog, pseudogene 15111562436111563265Rat
1592089Tbc1d5-ps1TBC1 domain family, member 5, pseudogene 15111564652111573058Rat
40966355LOC120103290small nucleolar RNA SNORA485111718328111718474Rat
7502785LOC102553524uncharacterized LOC1025535245112230510112246625Rat
41175373LOC120103115uncharacterized LOC1201031155112244680112248682Rat
41107926LOC120103114uncharacterized LOC1201031145112416267112442856Rat
3170Nfianuclear factor I/A5112436655112781878Rat
11413852LOC108351005uncharacterized LOC1083510055112797944112805529Rat
2318487Rps18l5ribosomal protein S18-like 55112997100112997655Rat
1305442Tm2d1TM2 domain containing 15113020793113062134Rat
1565362PatjPATJ, crumbs cell polarity complex component5113061985113364807Rat
1595093L1td1LINE-1 type transposase domain containing 15113373193113386088Rat
1307635Kank4KN motif and ankyrin repeat domains 45113401491113465526Rat
41215575Usp15-ps2ubiquitin specific peptidase 15, pseudogene 25113559958113563874Rat
1306461Usp1ubiquitin specific peptidase 15113587564113598934Rat
1309790Dock7dedicator of cytokinesis 75113599371113782871Rat
1564505Angptl3angiopoietin-like 35113703007113710044Rat
40981943Rpl15-ps14ribosomal protein L15, pseudogene 145113792289113793252Rat
1598323Atg4cautophagy related 4C, cysteine peptidase5113867218113935534Rat
7514994LOC102556219uncharacterized LOC1025562195113969322113977654Rat
2318140Tomm7-ps2translocase of outer mitochondrial membrane 7, pseudogene 25114217624114218000Rat
1591391Nsmce1-ps1NSE1 homolog, SMC5-SMC6 complex component, pseudogene 15114291743114292689Rat
7645046LOC102556374uncharacterized LOC1025563745114332364114334002Rat
621715Foxd3forkhead box D35114335084114337450Rat
1308815Alg6ALG6, alpha-1,3-glucosyltransferase5114404972114454440Rat
1310044Itgb3bpintegrin subunit beta 3 binding protein5114460217114525538Rat
1561825Efcab7EF-hand calcium binding domain 75114525403114576130Rat
3316Pgm1phosphoglucomutase 15114595298114654728Rat
1559469Ror1receptor tyrosine kinase-like orphan receptor 15114744311115088155Rat
41197686Rnu6-233RNA, U6 small nuclear 2335115066080115066186Rat
41373478LOC120103197U6 spliceosomal RNA5115097451115097553Rat
1565480Ube2uubiquitin conjugating enzyme E2 U5115118234115187296Rat
1310770Cachd1cache domain containing 15115411833115637312Rat
1307610Raver2ribonucleoprotein, PTB-binding 25115700985115780465Rat
69056Jak1Janus kinase 15115780248115888841Rat
41340414LOC120103217U6 spliceosomal RNA5115816834115816936Rat
41350661LOC120103254small nucleolar RNA SNORA705115961775115961902Rat
41367836LOC120102934uncharacterized LOC1201029345115963226115977411Rat
2325348Mir101amicroRNA 101a5115966332115966406Rat
41361854Rpl9-ps16ribosomal protein L9, pseudogene 165115982278115982849Rat
2078Ak4adenylate kinase 45116039222116099064Rat
1309900Dnajc6DnaJ heat shock protein family (Hsp40) member C65116120069116283448Rat
41379665LOC120102936uncharacterized LOC1201029365116198317116217439Rat
621034Leprotleptin receptor overlapping transcript5116289843116301951Rat
3001Leprleptin receptor5116294409116477904Rat
11421297Oog3-ps1oogenesin 3, pseudogene 15116480878116483954Rat
6500251Pramef12-ps1PRAME family member 12, pseudogene 15116534373116537110Rat
1587828Pramel18PRAME like 185116594690116601043Rat
7559665Oog3l2oogenesin 3 like 25116613783116615014Rat
41346487LOC120103168uncharacterized LOC1201031685116670973116707048Rat
3280Pde4bphosphodiesterase 4B5116799819117369155Rat
9264036LOC103692427uncharacterized LOC1036924275117278306117329847Rat
7556402LOC102548249uncharacterized LOC1025482495117352521117412598Rat
1564957Sgip1SH3GL interacting endocytic adaptor 15117536752117734593Rat
1311932Dynlt5dynein light chain Tctex-type family member 55117735509117758221Rat
9390410LOC103692428small EDRK-rich factor 2 pseudogene5117764116117764318Rat
7747960Insl5insulin like 55117773104117777376Rat
1311027Dnai4dynein axonemal intermediate chain 45117787398117876216Rat
1562337Mier1MIER1 transcriptional regulator5117876012117927592Rat
1309843Slc35d1solute carrier family 35 member D15117928628117981289Rat
1562532C5h1orf141similar to human chromosome 1 open reading frame 1415118000865118064520Rat
1304821Oma1OMA1 zinc metallopeptidase5118083728118136980Rat
41284048LOC120103366small nucleolar RNA U35118248246118248345Rat
1584921Ndufs2-ps1NADH:ubiquinone oxidoreductase core subunit S2, pseudogene 15118333499118337190Rat
628770Dab1DAB adaptor protein 15118392953119513625Rat
41398222LOC120103116uncharacterized LOC1201031165118861720118905161Rat
1592786Krt18-ps5keratin 18, pseudogene 55118885696118887657Rat
9097677Prpmp5l1proline-rich protein MP5 like 15119140608119141297Rat
41247414LOC120102937uncharacterized LOC1201029375119526679119538134Rat
2239C8bcomplement C8 beta chain5119535009119572565Rat
1308355C8acomplement C8 alpha chain5119583168119637675Rat
7654450LOC102547236uncharacterized LOC1025472365119668167119673199Rat
40980304LOC120103169uncharacterized LOC1201031695119673292119674938Rat
1564074Fyb2FYN binding protein 25119677116119800911Rat
11380122Sumo2l1small ubiquitin-like modifier 25119732630119735272Rat
620893Prkaa2protein kinase AMP-activated catalytic subunit alpha 25119807992119879987Rat
41296488LOC120102939uncharacterized LOC1201029395119887232119888833Rat
620454Plpp3phospholipid phosphatase 35119927085120002206Rat
41308087LOC120102940uncharacterized LOC1201029405119967274119994416Rat
7604289LOC102549668uncharacterized LOC1025496685120006217120012535Rat
9161289LOC103692433uncharacterized LOC1036924335120344175120357630Rat
41224678LOC120103289U2 spliceosomal RNA5120473916120474106Rat
1586416Rpl32l3ribosomal protein L32 like 35120631482120632245Rat
1584843Actb-ps9actin, beta, pseudogene 95120658714120659243Rat
41364653LOC120102941uncharacterized LOC1201029415120664956120672754Rat
41134400LOC120103170uncharacterized LOC1201031705120785823120801032Rat
40988753LOC120103293small nucleolar RNA SNORA485120966305120966422Rat
7497822LOC102547167uncharacterized LOC1025471675121057292121078382Rat
1306799Usp24ubiquitin specific peptidase 245121080687121210321Rat
728909Pcsk9proprotein convertase subtilisin/kexin type 95121211278121233688Rat
621139Bsndbarttin CLCNK type accessory subunit beta5121251774121260571Rat
1584102Tmem61transmembrane protein 615121266799121276426Rat
1306529Dhcr2424-dehydrocholesterol reductase5121344552121371124Rat
40998077LOC120102943uncharacterized LOC1201029435121360322121364747Rat
1559493Cimap2ciliary microtubule associated protein 25121375998121401869Rat
1561518Ttc22tetratricopeptide repeat domain 225121401973121423130Rat
41260485LOC120102944uncharacterized LOC1201029445121408508121412443Rat
1305345Pars2prolyl-tRNA synthetase 2, mitochondrial5121433993121439158Rat
1308529Ttc4tetratricopeptide repeat domain 45121444712121462381Rat
1563440Mroh7maestro heat-like repeat family member 75121463826121509233Rat
1359194Fam151afamily with sequence similarity 151, member A5121514804121527555Rat
2324815Acot11acyl-CoA thioesterase 115121523833121581699Rat
40970507LOC120102945uncharacterized LOC1201029455121621354121625108Rat
1597473Tlcd3b-ps1TLC domain containing 3B, pseudogene 15121681560121682371Rat
41334530LOC120102946uncharacterized LOC1201029465121688135121689649Rat
621502Ssbp3single stranded DNA binding protein 35121691370121828035Rat
619820Mrpl37mitochondrial ribosomal protein L375121827892121846187Rat
1597451Cyb5rlcytochrome b5 reductase-like5121846223121868287Rat
41169774LOC120102947uncharacterized LOC1201029475121856050121859503Rat
9112029Rpl28-ps1ribosomal protein L28, pseudogene 15121868202121868751Rat
1563467Cdcp2CUB domain containing protein 25121877581121894203Rat
1359481Tceanc2transcription elongation factor A N-terminal and central domain containing 25121923959121963018Rat
40985797Trnaa-agc38transfer RNA alanine (anticodon AGC) 385121943838121943912Rat
1310313Tmem59transmembrane protein 595121962507121983625Rat
1597398Ldlrad1low density lipoprotein receptor class A domain containing 15121984245122000941Rat
1308919Lrrc42leucine rich repeat containing 425122014678122035792Rat
1596413Ift25intraflagellar transport 255122035588122062421Rat
2504Dio1iodothyronine deiodinase 15122074285122090983Rat
735206Yipf1Yip1 domain family, member 15122112144122147729Rat
1560173Ndc1NDC1 transmembrane nucleoporin5122155992122202295Rat
1308030Glis1GLIS family zinc finger 15122222155122412141Rat
7506262LOC102551042uncharacterized LOC1025510425122296655122299913Rat
41311684LOC120102948uncharacterized LOC1201029485122301858122302471Rat
1560921Dmrtb1DMRT-like family B with proline-rich C-terminal, 15122444853122452483Rat
7548488LOC102551560uncharacterized LOC1025515605122474642122476368Rat
40937057LOC120103250U7 small nuclear RNA5122542313122542380Rat
1305729Lrp8LDL receptor related protein 85122563468122635434Rat
1305174Magohmago homolog, exon junction complex subunit5122639268122646650Rat
1559786CzibCXXC motif containing zinc binding protein5122648333122657767Rat
2398Cpt2carnitine palmitoyltransferase 25122664677122682126Rat
7585186Zc3hav1-ps9zinc finger CCCH-type containing, antiviral 1, pseudogene 95122692573122699273Rat
41250028LOC120103276small nucleolar RNA SNORA2/SNORA34 family5122726968122727103Rat
1311928Slc1a7solute carrier family 1 member 75122731003122775139Rat
7545693Podnpodocan5122774536122796755Rat
41078950LOC120103223U6 spliceosomal RNA5122805182122805288Rat
3642Scp2sterol carrier protein 25122806949122881259Rat
1308525Echdc2enoyl CoA hydratase domain containing 25122915874122934860Rat
1309582Zyg11azyg-11 family member A, cell cycle regulator5122935439122973766Rat
6500146Btf3-ps13basic transcription factor 3, pseudogene 135122951278122951824Rat
1307814Zyg11bzyg-11 family member B, cell cycle regulator5122985548123042735Rat
1305274Coa7cytochrome c oxidase assembly factor 75123069356123080942Rat
1593542Shisal2ashisa like 2A5123110577123126501Rat
1306999Gpx7glutathione peroxidase 75123145151123153141Rat
41030934Rpl9-ps7ribosomal protein L9, pseudogene 75123193865123195154Rat
1310138Tut4terminal uridylyl transferase 45123201723123306582Rat
7738149LOC10255467240S ribosomal protein S27-like5123216877123218666Rat
41398365LOC120103349small nucleolar RNA SNORA405123218554123218681Rat
41104723Rnu6-67RNA, U6 small nuclear 675123280963123281069Rat
1311129Prpf38apre-mRNA processing factor 38A5123312461123324160Rat
631435Orc1origin recognition complex, subunit 15123324273123348375Rat
1306630Cc2d1bcoiled-coil and C2 domain containing 1B5123353289123367343Rat
1310856Zfyve9zinc finger FYVE-type containing 95123370677123529699Rat
41360960Rpl9-ps8ribosomal protein L9, pseudogene 85123483635123484270Rat
1311774Btf3l4basic transcription factor 3-like 45123567902123587527Rat
1305960Txndc12thioredoxin domain containing 125123587854123612886Rat
1591357Kti12KTI12 chromatin associated5123601059123602581Rat
620922Rab3bRAB3B, member RAS oncogene family5123629562123697410Rat
41302851Rnu6-304RNA, U6 small nuclear 3045123754011123754111Rat
3210Nrdcnardilysin convertase5123755807123818910Rat
2325411Mir761microRNA 7615123776534123776609Rat
1311508Osbpl9oxysterol binding protein-like 95123819106123962213Rat
41337561LOC120103121uncharacterized LOC1201031215123891920123896857Rat
1591090Calr4calreticulin 45123986870124022436Rat
11410745LOC108351012uncharacterized LOC1083510125123999719124012690Rat
1305550Eps15epidermal growth factor receptor pathway substrate 155124045865124146221Rat
1311126Ttc39atetratricopeptide repeat domain 39A5124165102124204740Rat
2321596Rnf11ring finger protein 115124212433124243125Rat
41086853Rnu4-2RNA, U4 small nuclear 25124264229124264369Rat
1591038C5h1orf185similar to human chromosome 1 open reading frame 1855124276074124295881Rat
41264577LOC120103306small nucleolar RNA SNORA175124306820124306946Rat
1584919Eno1-ps10enolase 1, pseudogene 105124325978124327290Rat
2325Cdkn2ccyclin-dependent kinase inhibitor 2C5124411123124416278Rat
70987Faf1Fas associated factor 15124426032124790014Rat
7561791Dmrta2osldoublesex and mab-3 related transcription factor like family A2, opposite strand like5124800951124807191Rat
1308173Dmrta2DMRT-like family A25124805883124811694Rat
1560027Elavl4ELAV like RNA binding protein 45125056848125200543Rat
6493177Agbl4AGBL carboxypeptidase 45125254963126534367Rat
1584958Bend5BEN domain containing 55126290648126336662Rat
628657Spata6spermatogenesis associated 65126593122126676557Rat
1311383Slc5a9solute carrier family 5 member 95126709762126733468Rat
1588696Skint8selection and upkeep of intraepithelial T cells 85126764502126773125Rat
1587579Skint1selection and upkeep of intraepithelial T cells 15126786469126814599Rat
1587570Rps4x-ps3ribosomal protein S4, X-linked, pseudogene 35126842634126843859Rat
1566327Skint2selection and upkeep of intraepithelial T cells 25126878834126909044Rat
2318761Skint4l1selection and upkeep of intraepithelial T cells 4 like 15126999449127181460Rat
1587555Zfp385b-ps1zinc finger protein 385B, pseudogene 15127270721127271910Rat
6490949Skint4selection and upkeep of intraepithelial T cells 45127320857127514355Rat
7546204Ankrd13c-ps1ankyrin repeat domain 13C, pseudogene 15127376753127380494Rat
11380980Skint5lselection and upkeep of intraepithelial T cells 5 like5127381307127435697Rat
6490490LOC100911818selection and upkeep of intraepithelial T-cells protein 10-like5127636227127678245Rat
7699232Dek-ps1DEK proto-oncogene, pseudogene 15127636795127645699Rat
1587504Skint10selection and upkeep of intraepithelial T cells 105127769022127811541Rat
41385175Traf3ip2-ps1Traf3 interacting protein 2, pseudogene 15127813498127814580Rat
1584918Eef1a1-ps9eukaryotic translation elongation factor 1 alpha 1, pseudogene 95127824597127825986Rat
1586386Trabd2bTraB domain containing 2B5127941198128158946Rat
1304642Foxd2forkhead box D25128427986128430709Rat
11398866LOC108351105uncharacterized LOC1083511055128430904128442177Rat
621727Foxe3forkhead box E35128444912128446494Rat
1310116Cmpk1cytidine/uridine monophosphate kinase 15128480301128507830Rat
1304972StilSTIL, centriolar assembly protein5128520837128573732Rat
1306748Tal1TAL bHLH transcription factor 1, erythroid differentiation factor5128586776128600976Rat
41126986LOC120102952uncharacterized LOC1201029525128612314128619258Rat
620952Pdzk1ip1PDZK1 interacting protein 15128618050128623131Rat
41400278Trnap-agg66transfer RNA proline (anticodon AGG) 665128635289128635369Rat
628719Cyp4x1cytochrome P450, family 4, subfamily x, polypeptide 15128651681128683338Rat
628846Cyp4a8cytochrome P450, family 4, subfamily a, polypeptide 85128702130128733476Rat
40981232Mcts1-ps1MCTS1, re-initiation and release factor, pseudogene 15128728574128729067Rat
1562603Cyp4a8-ps1cytochrome P450, family 4, subfamily a, polypeptide 8, pseudogene 15128827304128852403Rat
41096017Pkm-ps4pyruvate kinase M1/2, pseudogene 45128906060128907436Rat
41170167H3f3cl1H3 histone, family 3C like 15128921288128921701Rat
2479Cyp4a2cytochrome P450, family 4, subfamily a, polypeptide 25128922355128934188Rat
41339692Cyp4a2-ps1cytochrome P450, family 4, subfamily a, polypeptide 2, pseudogene 15128967020128975566Rat
41245892Pkm-ps5pyruvate kinase M1/2, pseudogene 55128992798128994173Rat
41174391H3f3l2H3.3 histone like 25129008176129008589Rat
41366809Cyp4a2l1cytochrome P450, family 4, subfamily a, polypeptide 2 like 15129010501129021087Rat
40980620Cyp4a2-ps2cytochrome P450, family 4, subfamily a, polypeptide 2, pseudogene 25129053886129062415Rat
1584917Pkm-ps13pyruvate kinase M1/2, pseudogene 135129079590129081630Rat
631356Cyp4a3cytochrome P450, family 4, subfamily a, polypeptide 35129097571129115488Rat
68945Cyp4a1cytochrome P450, family 4, subfamily a, polypeptide 15129123323129137464Rat
2480Cyp4b1cytochrome P450, family 4, subfamily b, polypeptide 15129139019129176860Rat
1584916Fdps-ps2farnesyl diphosphate synthase, pseudogene 25129169497129172588Rat
1310351Efcab14EF-hand calcium binding domain 145129218139129258628Rat
1585134Tex38testis expressed 385129260652129265086Rat
1305417Atpaf1ATP synthase mitochondrial F1 complex assembly factor 15129265789129292463Rat
1307821Mob3cMOB kinase activator 3C5129306255129315264Rat
1559603Mknk1MAPK interacting serine/threonine kinase 15129318128129357641Rat
1584061Kncnkinocilin5129363464129366907Rat
41051438Tmem275transmembrane protein 2755129376602129377135Rat
1308265Dmbx1diencephalon/mesencephalon homeobox 15129394221129403040Rat
61808Faahfatty acid amide hydrolase5129479774129499018Rat
1559652Nsun4NOP2/Sun RNA methyltransferase 45129511224129532498Rat
1305987Uqcrhubiquinol-cytochrome c reductase hinge protein5129545978129554173Rat
1311221Lrrc41leucine rich repeat containing 415129554547129575450Rat
1310600Rad54lRAD54 like5129575431129605100Rat
1566001Lurap1leucine rich adaptor protein 15129618926129628651Rat
1359396Pomgnt1protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)5129634274129644150Rat
1303308Tspan1tetraspanin 15129646139129659383Rat
6491750P3r3urfPIK3R3 upstream open reading frame5129656654129673140Rat
11457244Trnap-agg7transfer RNA proline (anticodon AGG) 75129690563129690637Rat
41345979LOC120103122uncharacterized LOC1201031225129690639129700956Rat
621042Pik3r3phosphoinositide-3-kinase regulatory subunit 35129700925129772591Rat
1304573Mast2microtubule associated serine/threonine kinase 25129776293129915502Rat
41291644LOC120103379U6 spliceosomal RNA5129832346129832452Rat
41075354LOC120103199U6 spliceosomal RNA5129952187129952290Rat
41245337Rpl7a-ps20ribosomal protein L7a, pseudogene 205129956798129962912Rat
1306299Ippintracisternal A particle-promoted polypeptide5129962528130001237Rat
1561569Tmem69transmembrane protein 695130004888130008466Rat
1359562Gpbp1l1GC-rich promoter binding protein 1-like 15130009768130050636Rat
1598211Ccdc17coiled-coil domain containing 175130051158130056676Rat
1359609Naspnuclear autoantigenic sperm protein5130057363130083003Rat
68346Akr1a1aldo-keto reductase family 1 member A15130092945130130277Rat
41326116LOC120103189U6 spliceosomal RNA5130107105130107211Rat
620039Prdx1peroxiredoxin 15130147258130162856Rat
1310806Mmachcmetabolism of cobalamin associated C5130166056130172735Rat
1564486Ccdc163coiled-coil domain containing 1635130172014130178934Rat
619984Tesk2testis associated actin remodelling kinase 25130178715130270594Rat
1582959Rps26l4ribosomal protein S26 like 45130239204130239590Rat
1309094Toe1target of EGR1, exonuclease5130270484130274050Rat
620045MutyhmutY DNA glycosylase5130274034130286149Rat
1310014Hpdl4-hydroxyphenylpyruvate dioxygenase-like5130286627130288233Rat
2320713Rps20-ps2ribosomal protein S20, pseudogene 25130298198130298740Rat
7649714LOC102550980uncharacterized LOC1025509805130311847130319039Rat
41199780LOC120103232U6 spliceosomal RNA5130338326130338430Rat
1310741Zswim5zinc finger, SWIM-type containing 55130346733130463791Rat
3946Uroduroporphyrinogen decarboxylase5130464695130468783Rat
1309823Hectd3HECT domain E3 ubiquitin protein ligase 35130469840130479802Rat
7638959LOC10255530740S ribosomal protein S12-like5130485611130486622Rat
620821Eif2b3eukaryotic translation initiation factor 2B subunit gamma5130492167130558692Rat
1309039Ptch2patched 25130571956130592506Rat
2320529Btbd19BTB domain containing 195130596966130605403Rat
1565942Dynlt4dynein light chain Tctex-type 45130605437130607224Rat
62039Plk3polo-like kinase 35130607142130612317Rat
1596200Best4bestrophin 45130622194130629045Rat
61910Rps8ribosomal protein S85130630362130632932Rat
41105011Snord38bsmall nucleolar RNA, C/D box 38B5130630642130630711Rat
41246695Snord38asmall nucleolar RNA, C/D box 38A5130631069130631136Rat
41375413Snord46small nucleolar RNA, C/D box 465130632015130632118Rat
41205584Snord55small nucleolar RNA, C/D box 555130632614130632692Rat
620239Kif2ckinesin family member 2C5130637347130662680Rat
41216010Trnaa-agc53transfer RNA alanine (anticodon AGC) 535130664760130664832Rat
41391363LOC120103376U5 spliceosomal RNA5130667018130667133Rat
41150489LOC120103377U5 spliceosomal RNA5130673379130673494Rat
41012747LOC120103378U5 spliceosomal RNA5130680654130680769Rat
1563714Armh1armadillo-like helical domain containing 15130680955130722062Rat
1307066Tmem53transmembrane protein 535130721780130737692Rat
1598210Rnf220ring finger protein 2205130739173130961386Rat
1596047Rps13-ps2ribosomal protein S13, pseudogene 25130966577130967555Rat
1595859Eri3ERI1 exoribonuclease family member 35131016146131143347Rat
1311295Dmap1DNA methyltransferase 1-associated protein 15131143726131151760Rat
7691700LOC102553953uncharacterized LOC1025539535131201325131203990Rat
9186911Klf18lKruppel-like factor 18 like5131226565131228325Rat
1307711Klf17KLF transcription factor 175131293068131315878Rat
621243Slc6a9solute carrier family 6 member 95131374562131408733Rat
1562911Ccdc24coiled-coil domain containing 245131398766131412395Rat
41390291LOC120102957uncharacterized LOC1201029575131411481131417615Rat
1305358B4galt2beta-1,4-galactosyltransferase 25131412541131422573Rat
1308303Atp6v0bATPase H+ transporting V0 subunit B5131423384131424900Rat
1304634Dph2diphthamide biosynthesis 25131428434131431394Rat
620071Ipo13importin 135131433770131454044Rat
621427Artnartemin5131458596131470193Rat
68414St3gal3ST3 beta-galactoside alpha-2,3-sialyltransferase 35131470348131670794Rat
41129363LOC120102961uncharacterized LOC1201029615131488481131492415Rat
41119943LOC120102959uncharacterized LOC1201029595131567330131572307Rat
41337843LOC120102960uncharacterized LOC1201029605131587421131591432Rat
1306378Kdm4alysine demethylase 4A5131672754131719534Rat
3453Ptprfprotein tyrosine phosphatase, receptor type, F5131741959131824000Rat
7559302LOC102553423uncharacterized LOC1025534235131809376131814053Rat
1561416Hyihydroxypyruvate isomerase5131894575131897709Rat
1308616Szt2SZT2 subunit of KICSTOR complex5131897250131943953Rat
1305552Med8mediator complex subunit 85131948632131949516Rat
1587151Elovl1ELOVL fatty acid elongase 15131961478131965961Rat
620477Cdc20cell division cycle 205131966203131970406Rat
9354806LOC103692460uncharacterized LOC1036924605131970623131974793Rat
1311069MplMPL proto-oncogene, thrombopoietin receptor5131973895131987472Rat
41271559LOC120103206U6 spliceosomal RNA5131979522131979625Rat
7625538LOC102554074uncharacterized LOC1025540745131986391131999442Rat
621642Tie1tyrosine kinase with immunoglobulin-like and EGF-like domains 15132000013132019658Rat
1587100Tmem258l2transmembrane protein 258 like 25132041753132042174Rat
1587085Rps5-ps1ribosomal protein S5, pseudogene 15132042844132043482Rat
1305347C5h1orf210similar to human chromosome 1 open reading frame 2105132048755132051913Rat
1311937Tmem125transmembrane protein 1255132063162132064566Rat
1585948Cfap57cilia and flagella associated protein 575132074404132148102Rat
1305762Ebna1bp2EBNA1 binding protein 25132148164132152730Rat
11479750LOC108351020uncharacterized LOC1083510205132160198132164045Rat
1333931Or13p10olfactory receptor family 13 subfamily P member 105132186704132187651Rat
1332845Or13p9olfactory receptor family 13 subfamily P member 95132203917132204855Rat
1333749Or13p4olfactory receptor family 13 subfamily P member 45132216822132217769Rat
1333843Or13p3olfactory receptor family 13 subfamily P member 35132236461132237399Rat
1584354Or13p8bolfactory receptor family 13 subfamily P member 8B5132250763132255279Rat
1333211Or13p5olfactory receptor family 13 subfamily P member 55132261753132265386Rat
1333268Or10ak14bolfactory receptor family 10 subfamily AK member 14B5132271846132272793Rat
41245460LOC120093079olfactory receptor 2A12-like5132293815132294801Rat
1334007Or10ak14olfactory receptor family 10 subfamily AK member 145132312678132313619Rat
1584753Olfr1330-ps1olfactory receptor 1330, pseudogene 15132326454132327460Rat
1583684Or10ak11olfactory receptor family 10 subfamily AK member 115132345164132346165Rat
1333331Or10ak7bolfactory receptor family 5 subfamily AK member 7B5132373994132374941Rat
1332921Or10ak7folfactory receptor family 10 subfamily AK member 7F5132407421132408368Rat
1334318Or10ak13olfactory receptor family 10 subfamily AK member 135132435679132436626Rat
1333113Or10ak7eolfactory receptor family 10 subfamily AK member 7E5132462578132463525Rat
1332893Or10ak7olfactory receptor family 10 subfamily AK member 75132489097132490044Rat
1598117Mrs2-ps1magnesium transporter MRS2, pseudogene 15132496554132497918Rat
1334300Or10ak7d-ps1olfactory receptor family 10 subfamily AK member 7D, pseudogene 15132504419132505360Rat
1334256Or10ak7c-ps1olfactory receptor family 10 subfamily AK member 7C, pseudogene 15132519279132520219Rat
41360569Trnas-aga19transfer RNA serine (anticodon AGA) 195132530789132530871Rat
1333490Or10ak7g-ps1olfactory receptor family 10 subfamily AK member 7G, pseudogene 15132547785132548722Rat
1310787Lao1L-amino acid oxidase 15132573698132583591Rat
41378098LOC120103309small nucleolar RNA SNORA175132591434132591567Rat
6496493Ubb-ps1ubiquitin B, pseudogene 15132604603132605052Rat
11451090LOC108351140NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene5132695795132696187Rat
11512073LOC108351021uncharacterized LOC1083510215132706788132717161Rat
3704Slc2a1solute carrier family 2 member 15132717196132745416Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10262D5Rhm31335119564714119564847Ratregion
10263D5Rhm41455119592239119592384Ratregion
10321D5Lev171235103991975103992098Ratregion
10324D5Lev191835124411616124411799Ratregion
10453D5Mcw15128924597128924722Ratregion
10453D5Mcw15129098900129099033Ratregion
10454D5Wox121185128924607128924723Ratregion
10454D5Wox121185129098910129099034Ratregion
10826D5Mgh231225109897808109897936Ratregion
10827D5Lev152925109894810109895102Ratregion
11090D5Rhm21695114659557114659726Ratregion
33804D5Mit62165117817033117817245Ratregion
33981D5Mit426659045014490450412Ratregion
34041D5Mit51445104250862104251008Ratregion
34581D5Mgh272445129132447129132675Ratregion
34583D5Rjr11905129132428129132602Ratregion
11303D5Wox111285132743341132743469Ratregion
11304D5Arb72325132744136132744368Ratregion
33680D5Mit132025131345754131345958Ratregion
33731D5Mit141895131378081131378254Ratregion
36139D5Rat271365118370674118370807Ratregion
36187D5Rat301605128499722128499884Ratregion
35306D5Rat261545113558156113558310Ratregion
35545D5Rat28945120740824120740915Ratregion
37200D5Rat782375114305693114305938Ratregion
37644D5Rat1152035112419535112419733Ratregion
37680D5Rat6423959793714997937392Ratregion
37690D5Rat9223859559615095596396Ratregion
37772DXRat532795103857355103857402Ratregion
37944D5Rat831985119385986119386155Ratregion
37950D5Rat951605124048559124048658Ratregion
36667D5Rat542645120182440120182703Ratregion
36687D5Rat251745113060909113061097Ratregion
36711D5Rat321645132686313132686472Ratregion
35032D5Rat1816058886887988869033Ratregion
35060D5Rat291705129406121129406289Ratregion
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5502701C1orf1651175126329451126329568Ratregion
5503196mActb05120658368120658774Ratregion
5503142PTPRD059006061290061733Ratregion
5503256UniSTS:23755610885130645951130647039Ratregion
5503958UniSTS:2569462675109895884109896151Ratregion
5504068px-5c81565125426959125427115Ratregion
5507643Dio15835122091100122091683Ratregion
5503680ELAVL2__75779485105962550105963498Ratregion
5503845Nmt12795103658564103658845Ratregion
5504010px-21e121355106315971106316106Ratregion
5503992Dmrtb105122447528122448797Ratregion
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5504849ha25056535120716698120717351Ratregion
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5505042Mpl8625131985255131986117Ratregion
5505686UniSTS:4893139545132254325132255279Ratregion
5505921UniSTS:496549945131966929131967934Ratregion
5506177UniSTS:498727675132005377132005444Ratregion
5506246UniSTS:50244205117970947117971573Ratregion
5506234Ndufs21215118333343118333464Ratregion
5506715SCP2965122868632122868728Ratregion
5506873G4707122259981947399819695Ratregion
5507013fj50d02.y12385131745458131745796Ratregion
5507059UniSTS:2242831045131423456131423560Ratregion
5507117UniSTS:22460315959895565698955815Ratregion
5507169UniSTS:2249081775131743133131743310Ratregion
5499675MARC_7377-7378:992008389:13855129639150129639535Ratregion
5499851UniSTS:2349962235123367012123367235Ratregion
5501398Mpdz059587464695875800Ratregion
5500262D1S2299E875125058161125058248Ratregion
5499843UniSTS:2349692875113335953113336240Ratregion
5499845UniSTS:2349673385113385613113385951Ratregion
5500515RH135495975113703231113703328Ratregion
5500368GDB:3526881095119547438119547547Ratregion
5500599RH1361501995130058470130059440Ratregion
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5504926Nfib5259696342296963474Ratregion
5505275Elavl24705105962786105963428Ratregion
5505275Elavl24705105962958105963428Ratregion
5501816MARC_13905-13906:1007570719:16495130471126130471775Ratregion
5505812UniSTS:49540514285131693710131695138Ratregion
5506509AL0093641495113751250113751399Ratregion
5501940MARC_17865-17866:1025013775:148759676516596765652Ratregion
5502172MARC_7381-7382:996687840:1985129484171129485414Ratregion
5502174MARC_7369-7370:996687826:16505131416164131416814Ratregion
5501980MARC_21798-21799:1025034200:11015130267477130267793Ratregion
5501998MARC_23422-23423:1025023955:36175130586175130586792Ratregion
5502224G64294150359248199492483497Ratregion
5502311RH1243872305101369255101369485Ratregion
5502321RH12445215059432170494321854Ratregion
5502355RH1245661025117703291117703393Ratregion
5502405RH1247451585124789789124789947Ratregion
6480632D5Uwm741855127833594127833751Ratregion
6480634D5Uwm755805124712419124712918Ratregion
11528623rs1056922315126768268126768268Ratregion
11528621rs1986519875125309350125309350Ratregion
11528622rs1974342915124399325124399325Ratregion
Position Markers

Peak: (D5Rat156)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25110,265,888 - 110,266,058 (+)MAPPER
Rnor_6.05114,384,129 - 114,384,298NCBI
Rnor_5.05118,328,598 - 118,328,767UniSTS
RGSC_v3.45115,745,463 - 115,745,633RGD
RGSC_v3.45115,745,464 - 115,745,633UniSTS
RGSC_v3.15115,750,646 - 115,751,107RGD
Celera5108,877,950 - 108,878,119UniSTS
SHRSP x BN Map560.6499RGD
SHRSP x BN Map560.6499UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5111416838156416838Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)579584860124584860Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5125392826139989768Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5129132447151006154Rat
2302381Bw84Body weight QTL 844.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
1582230Bw78Body weight QTL 783.20.0016epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)5119085612128034027Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5131345754166875058Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)579584860124584860Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5127798274166875058Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
7411561Bw134Body weight QTL 134240.001body mass (VT:0001259)body weight gain (CMO:0000420)54946360094463600Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5106906205151906205Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)597570330136479578Rat
1582212Livw2Liver weight QTL 23.50.0004liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)599016066119085810Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)587468046132468046Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5128506074166875058Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)5108938288153938288Rat
11528624Bss114Bone structure and strength QTL 1146.543e-07femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5124399325126768268Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5105999803150999803Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5126424772166875058Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5120740824151018848Rat
1358909Kidm25Kidney mass QTL 251.87kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)590067849128034027Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)5103689353148689353Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5106906205151906205Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5111416838156416838Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5106906205151906205Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)555715622100715622Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5111416838156416838Rat
9589025Epfw7Epididymal fat weight QTL 720.660.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)54946360094463600Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)584132602129132602Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)566174080124160948Rat
2316954Rf57Renal function QTL 570kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)55979352890450144Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5108845856153845856Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)558829236128034027Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)534944474113558310Rat
1358889Bp261Blood pressure QTL 2612.86arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)590067849128034027Rat
2316957Pur21Proteinuria QTL 216.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)559793528113558156Rat
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)568984307104251008Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)597059760147465714Rat
7794743Bp373Blood pressure QTL 3730.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5112175546116047089Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
61380Edpm5Estrogen-dependent pituitary mass QTL 54.50.92pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)568984307104251008Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
7794739Bp372Blood pressure QTL 3720.0058arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5117913688125222967Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
7365049Bp359Blood pressure QTL 359arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128071929134724733Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)56029343498603051Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5129132428143070159Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
1331782Rf36Renal function QTL 363.296kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)58384059897059958Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5106906205151906205Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5106906205151906205Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5132717196165560427Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5121846814166846814Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5128033842133011550Rat
2303615Vencon7Ventilatory control QTL 70.001respiration trait (VT:0001943)respiration rate (CMO:0000289)55098389595983895Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5120740824143608494Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
7394708Emca11Estrogen-induced mammary cancer QTL 11mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)599753548113061097Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128924607166875058Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)534730116104251008Rat
1598846Bp293Blood pressure QTL 2933.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)579584860124584860Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5124160767133749643Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5108845856153845856Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5130130159166875058Rat
631527Tls1T-lymphoma susceptibility QTL 100.001thymus integrity trait (VT:0010555)post-insult time to onset of T-cell lymphoma (CMO:0001907)590450144135450144Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5111416838156416838Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)569540295151018848Rat
1600362Mcs19Mammary carcinoma susceptibility QTL 192.5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)599485997103690167Rat
2303574Gluco42Glucose level QTL 422blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)55349671998496719Rat
2290005Mcs24Mammary carcinoma susceptibility QTL 24mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)564719390109719390Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5127798274166875058Rat
2312671Scl64Serum cholesterol level QTL 640.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)568984307104251008Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)587765973132765973Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)599216724148607142Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 5-6 months old 137 F2 male rats 1299960
qtl_general software used: one-way analysis of variance (ANOVA) 1299960
qtl_general measurement method: body weight was measured 1299960