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Gene: Spata6 (spermatogenesis associated 6) Rattus norvegicus
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Symbol: Spata6
Name: spermatogenesis associated 6
Description: Predicted to have myosin light chain binding activity. Predicted to be involved in motile cilium assembly and spermatogenesis. Predicted to localize to the sperm connecting piece. Orthologous to human SPATA6 (spermatogenesis associated 6); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Hash; kinesin-related protein HASH; spermatogenesis-associated protein 6; spermatogenesis-related factor 1
Orthologs:
Homo sapiens (human) : SPATA6 (spermatogenesis associated 6)  HGNC  Alliance
Mus musculus (house mouse) : Spata6 (spermatogenesis associated 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spata6 (spermatogenesis associated 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SPATA6 (spermatogenesis associated 6)
Canis lupus familiaris (dog) : SPATA6 (spermatogenesis associated 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spata6 (spermatogenesis associated 6)
Sus scrofa (pig) : SPATA6 (spermatogenesis associated 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05131,719,922 - 131,803,853 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05135,542,962 - 135,626,740 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45133,264,745 - 133,349,071 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15133,269,970 - 133,354,295 (+)NCBI
Celera5125,295,120 - 125,378,102 (+)NCBICelera
Cytogenetic Map5q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Spata6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 628657
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.