Echdc2 (enoyl CoA hydratase domain containing 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Echdc2 (enoyl CoA hydratase domain containing 2) Rattus norvegicus
Analyze
Symbol: Echdc2
Name: enoyl CoA hydratase domain containing 2
RGD ID: 1308525
Description: Predicted to enable lyase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be active in mitochondrion. Orthologous to human ECHDC2 (enoyl-CoA hydratase domain containing 2); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: enoyl Coenzyme A hydratase domain containing 2; enoyl-CoA hydratase domain-containing protein 2, mitochondrial; LOC298381; RGD1308525; similar to hypothetical protein D4Ertd765e
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85128,144,241 - 128,163,611 (+)NCBIGRCr8
mRatBN7.25122,915,874 - 122,934,860 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5122,916,134 - 122,934,859 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5125,534,346 - 125,547,333 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05127,257,395 - 127,270,382 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05127,308,713 - 127,321,700 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05127,770,570 - 127,789,568 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5127,770,570 - 127,789,567 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05131,618,513 - 131,638,156 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45129,265,272 - 129,284,240 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15129,274,219 - 129,289,467 (+)NCBI
Celera5121,659,440 - 121,672,312 (+)NCBICelera
Cytogenetic Map5q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 98 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Echdc2Rat(+)-catechin multiple interactionsISORGD:13498446480464[Catechin co-treated with Grape Seed Proanthocyanidins] results in decreased expression of ECHDC2 mRNACTDPMID:24763279
Echdc2Rat(+)-schisandrin B multiple interactionsEXP 6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of ECHDC2 mRNA]CTDPMID:31150632
Echdc2Rat1,1-dichloroethene decreases expressionISORGD:15505586480464vinylidene chloride results in decreased expression of ECHDC2 mRNACTDPMID:26682919
Echdc2Rat1,2-dimethylhydrazine multiple interactionsISORGD:15505586480464[1,2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of ECHDC2 mRNACTDPMID:22206623
Echdc2Rat1,2-dimethylhydrazine decreases expressionISORGD:155055864804641,2-Dimethylhydrazine results in decreased expression of ECHDC2 mRNACTDPMID:22206623
Echdc2Rat17alpha-ethynylestradiol decreases expressionISORGD:15505586480464Ethinyl Estradiol results in decreased expression of ECHDC2 mRNACTDPMID:17942748
Echdc2Rat17alpha-ethynylestradiol decreases expressionEXP 6480464Ethinyl Estradiol results in decreased expression of ECHDC2 mRNACTDPMID:17557909
Echdc2Rat17alpha-ethynylestradiol multiple interactionsISORGD:15505586480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of ECHDC2 mRNACTDPMID:17942748
Echdc2Rat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of ECHDC2 proteinCTDPMID:32145629
Echdc2Rat17beta-estradiol increases expressionISORGD:15505586480464Estradiol results in increased expression of ECHDC2 mRNACTDPMID:39298647
Echdc2Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISORGD:15505586480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of ECHDC2 mRNACTDPMID:17942748
Echdc2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:15505586480464Tetrachlorodibenzodioxin results in increased expression of ECHDC2 mRNACTDPMID:31961203
Echdc2Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:15505586480464Tetrachlorodibenzodioxin affects the expression of ECHDC2 mRNACTDPMID:21570461
Echdc2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of ECHDC2 mRNACTDPMID:18796159|PMID:21215274
Echdc2Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISORGD:155055864804642,2',4,4',5-brominated diphenyl ether affects the expression of ECHDC2 mRNACTDPMID:38648751
Echdc2Rat2,4-dinitrotoluene affects expressionEXP 64804642,4-dinitrotoluene affects the expression of ECHDC2 mRNACTDPMID:21346803
Echdc2Rat2,6-dinitrotoluene affects expressionEXP 64804642,6-dinitrotoluene affects the expression of ECHDC2 mRNACTDPMID:21346803
Echdc2Rat4,4'-sulfonyldiphenol affects expressionISORGD:15505586480464bisphenol S affects the expression of ECHDC2 mRNACTDPMID:39298647
Echdc2Rat5-aza-2'-deoxycytidine affects expressionISORGD:13498446480464Decitabine affects the expression of ECHDC2 mRNACTDPMID:23300844
Echdc2Rat6-propyl-2-thiouracil affects expressionEXP 6480464Propylthiouracil affects the expression of ECHDC2 mRNACTDPMID:24780913

1 to 20 of 98 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Echdc2Ratfatty acid beta-oxidation involved_inIBAMGI:94871|PANTHER:PTN000941828|RGD:61892|RGD:69330|UniProtKB:P300841600115GO_REF:0000033GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Echdc2Ratmitochondrion located_inISORGD:13498449068941 PMID:34800366FlyBasePMID:34800366
Echdc2Ratmitochondrion is_active_inIBAMGI:1338011|PANTHER:PTN000234999|TAIR:locus:21291461600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Echdc2Ratcatalytic activity enablesIEAInterPro:IPR0183761600115GO_REF:0000002InterProGO_REF:0000002
Echdc2Ratcatalytic activity enablesIEAARBA:ARBA000275331600115GO_REF:0000117UniProtGO_REF:0000117
Echdc2Ratlyase activity enablesIEAUniProtKB-KW:KW-04561600115GO_REF:0000043UniProtGO_REF:0000043


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:34800366  



Echdc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85128,144,241 - 128,163,611 (+)NCBIGRCr8
mRatBN7.25122,915,874 - 122,934,860 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5122,916,134 - 122,934,859 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5125,534,346 - 125,547,333 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05127,257,395 - 127,270,382 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05127,308,713 - 127,321,700 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05127,770,570 - 127,789,568 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5127,770,570 - 127,789,567 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05131,618,513 - 131,638,156 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45129,265,272 - 129,284,240 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15129,274,219 - 129,289,467 (+)NCBI
Celera5121,659,440 - 121,672,312 (+)NCBICelera
Cytogenetic Map5q34NCBI
ECHDC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38152,895,910 - 52,921,774 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl152,895,910 - 52,927,212 (-)EnsemblGRCh38hg38GRCh38
GRCh37153,361,582 - 53,387,446 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36153,134,492 - 53,160,034 (-)NCBINCBI36Build 36hg18NCBI36
Build 34153,073,925 - 53,099,419NCBI
Celera151,649,717 - 51,675,255 (-)NCBICelera
Cytogenetic Map1p32.3NCBI
HuRef151,477,347 - 51,503,011 (-)NCBIHuRef
CHM1_1153,478,780 - 53,504,616 (-)NCBICHM1_1
T2T-CHM13v2.0152,777,434 - 52,803,290 (-)NCBIT2T-CHM13v2.0
Echdc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394108,022,630 - 108,036,505 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4108,022,634 - 108,036,505 (+)EnsemblGRCm39 Ensembl
GRCm384108,165,436 - 108,179,308 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4108,165,437 - 108,179,308 (+)EnsemblGRCm38mm10GRCm38
MGSCv374107,838,071 - 107,851,913 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364107,663,428 - 107,677,239 (+)NCBIMGSCv36mm8
Celera4106,508,736 - 106,522,604 (+)NCBICelera
Cytogenetic Map4C7NCBI
cM Map450.3NCBI
Echdc2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554646,284,436 - 6,300,908 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554646,284,436 - 6,300,908 (+)NCBIChiLan1.0ChiLan1.0
ECHDC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21173,915,096 - 173,946,810 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11173,057,348 - 173,089,056 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0152,163,918 - 52,195,629 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1153,766,197 - 53,792,466 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl153,766,197 - 53,792,248 (-)Ensemblpanpan1.1panPan2
ECHDC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1555,972,116 - 55,991,573 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl555,972,004 - 55,991,531 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha556,037,636 - 56,057,294 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0556,161,679 - 56,181,408 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl556,160,574 - 56,207,746 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1556,153,036 - 56,172,685 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0556,044,711 - 56,064,447 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0556,434,422 - 56,454,151 (+)NCBIUU_Cfam_GSD_1.0
Echdc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505867,275,962 - 67,293,555 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365228,122,351 - 8,143,884 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365228,122,748 - 8,139,940 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ECHDC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6159,326,150 - 159,347,173 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16159,326,146 - 159,347,178 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26146,951,363 - 146,966,597 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ECHDC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12080,017,665 - 80,043,810 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2080,017,421 - 80,044,670 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603337,235,452 - 37,261,600 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Echdc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624859283,412 - 299,489 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624859283,436 - 299,489 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Echdc2
131 total Variants

Predicted Target Of
Summary Value
Count of predictions:269
Count of miRNA genes:168
Interacting mature miRNAs:183
Transcripts:ENSRNOT00000047653
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 49 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5111416838156416838Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)579584860124584860Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
1582230Bw78Body weight QTL 783.20.0016epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)5119085612128034027Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)579584860124584860Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5106906205151906205Rat

1 to 10 of 49 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000047653   ⟹   ENSRNOP00000049726
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5122,916,134 - 122,934,859 (+)Ensembl
Rnor_6.0 Ensembl5127,770,570 - 127,789,567 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000096852   ⟹   ENSRNOP00000082488
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5122,916,134 - 122,927,863 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000102891   ⟹   ENSRNOP00000077778
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5122,916,134 - 122,925,093 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000109970   ⟹   ENSRNOP00000092153
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5122,916,134 - 122,934,859 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000119614   ⟹   ENSRNOP00000081427
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5122,916,134 - 122,934,859 (+)Ensembl
RefSeq Acc Id: NM_001106675   ⟹   NP_001100145
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85128,144,886 - 128,163,610 (+)NCBI
mRatBN7.25122,916,134 - 122,934,859 (+)NCBI
Rnor_6.05127,770,570 - 127,789,567 (+)NCBI
Rnor_5.05131,618,513 - 131,638,156 (+)NCBI
RGSC_v3.45129,265,272 - 129,284,240 (+)RGD
Celera5121,659,440 - 121,672,312 (+)RGD
Sequence:
RefSeq Acc Id: XM_006238507   ⟹   XP_006238569
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85128,148,378 - 128,163,611 (+)NCBI
mRatBN7.25122,919,626 - 122,934,860 (+)NCBI
Rnor_6.05127,774,056 - 127,789,568 (+)NCBI
Rnor_5.05131,618,513 - 131,638,156 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039109577   ⟹   XP_038965505
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85128,144,500 - 128,163,611 (+)NCBI
mRatBN7.25122,915,875 - 122,934,860 (+)NCBI
RefSeq Acc Id: XM_063287394   ⟹   XP_063143464
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85128,144,241 - 128,158,135 (+)NCBI
RefSeq Acc Id: XM_063287395   ⟹   XP_063143465
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85128,144,241 - 128,158,135 (+)NCBI
RefSeq Acc Id: XR_005504398
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85128,144,491 - 128,163,225 (+)NCBI
mRatBN7.25122,915,874 - 122,934,860 (+)NCBI
RefSeq Acc Id: XR_005504399
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85128,144,491 - 128,163,178 (+)NCBI
mRatBN7.25122,915,874 - 122,934,431 (+)NCBI
RefSeq Acc Id: XR_005504400
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85128,144,494 - 128,163,178 (+)NCBI
mRatBN7.25122,915,875 - 122,934,431 (+)NCBI
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: NP_001100145   ⟸   NM_001106675
- UniProtKB: D3ZIL6 (UniProtKB/TrEMBL),   A6JYU2 (UniProtKB/TrEMBL),   A0A8I5ZUZ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006238569   ⟸   XM_006238507
- Peptide Label: isoform X3
- UniProtKB: A6JYU3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000049726   ⟸   ENSRNOT00000047653
RefSeq Acc Id: XP_038965505   ⟸   XM_039109577
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZUZ9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000082488   ⟸   ENSRNOT00000096852
Enoyl-CoA hydratase/isomerase

Name Modeler Protein Id AA Range Protein Structure
AF-D3ZIL6-F1-model_v2 AlphaFold D3ZIL6 1-296 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13693899
Promoter ID:EPDNEW_R4423
Type:initiation region
Name:Echdc2_1
Description:enoyl CoA hydratase domain containing 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.05127,770,577 - 127,770,637EPDNEW


1 to 33 of 33 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-40394 BioCyc
Ensembl Genes ENSRNOG00000029333 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000047653 ENTREZGENE
  ENSRNOT00000047653.4 UniProtKB/TrEMBL
  ENSRNOT00000096852 ENTREZGENE
  ENSRNOT00000096852.1 UniProtKB/TrEMBL
  ENSRNOT00000102891.1 UniProtKB/TrEMBL
  ENSRNOT00000109970.1 UniProtKB/TrEMBL
  ENSRNOT00000119614.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.12.10 UniProtKB/TrEMBL
  2-enoyl-CoA Hydratase, Chain A, domain 1 UniProtKB/TrEMBL
InterPro ClpP/crotonase-like_dom UniProtKB/TrEMBL
  Crontonase_C UniProtKB/TrEMBL
  Crotonase_core UniProtKB/TrEMBL
  ECH_dom UniProtKB/TrEMBL
  Enoyl-CoA_hyd/isom_CS UniProtKB/TrEMBL
KEGG Report rno:298381 UniProtKB/TrEMBL
NCBI Gene 298381 ENTREZGENE
PANTHER ENOYL-COA HYDRATASE DOMAIN-CONTAINING PROTEIN 2, MITOCHONDRIAL UniProtKB/TrEMBL
  ENOYL-COA HYDRATASE-RELATED UniProtKB/TrEMBL
Pfam ECH UniProtKB/TrEMBL
  ECH_2 UniProtKB/TrEMBL
PhenoGen Echdc2 PhenoGen
PROSITE ENOYL_COA_HYDRATASE UniProtKB/TrEMBL
RatGTEx ENSRNOG00000029333 RatGTEx
Superfamily-SCOP SSF52096 UniProtKB/TrEMBL
UniProt A0A8I5Y213 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZUZ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZV01 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AGL7_RAT UniProtKB/TrEMBL
  A6JYU2 ENTREZGENE, UniProtKB/TrEMBL
  A6JYU3 ENTREZGENE, UniProtKB/TrEMBL
  D3ZIL6 ENTREZGENE, UniProtKB/TrEMBL
1 to 33 of 33 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-08-02 Echdc2  enoyl CoA hydratase domain containing 2  Echdc2  enoyl Coenzyme A hydratase domain containing 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Echdc2  enoyl Coenzyme A hydratase domain containing 2   Echdc2_predicted  enoyl Coenzyme A hydratase domain containing 2 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Echdc2_predicted  enoyl Coenzyme A hydratase domain containing 2 (predicted)  RGD1308525_predicted  similar to hypothetical protein D4Ertd765e (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1308525_predicted  similar to hypothetical protein D4Ertd765e (predicted)  LOC298381_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC298381_predicted  similar to hypothetical protein D4Ertd765e (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL