BE119243 Marker Search Result - Rat Genome Database

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Marker: BE119243

Symbol: BE119243
Previously known as:
RGD ID: 5082357
Expected Size: 182 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25103,893,165 - 103,893,330 (+)MAPPERmRatBN7.2
mRatBN7.21059,686,265 - 59,686,447 (+)MAPPERmRatBN7.2
Rnor_6.01061,671,922 - 61,672,103NCBIRnor6.0
Rnor_6.05107,731,219 - 107,731,383NCBIRnor6.0
Rnor_5.01061,393,658 - 61,393,839UniSTSRnor5.0
Rnor_5.05111,699,803 - 111,699,967UniSTSRnor5.0
RGSC_v3.45108,808,872 - 108,809,036UniSTSRGSC3.4
RGSC_v3.41062,133,263 - 62,133,444UniSTSRGSC3.4
Celera1058,716,802 - 58,716,983UniSTS
Celera5102,608,004 - 102,608,168UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map5q32UniSTS
Is Marker For: Genes:   Mtap   Mettl16   LOC100365303   LOC100362816  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GCGTAGACTGACCTTACACCCA
Reverse Primer AGCTTGCTTTGGAGGTAGAACC
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1310114Mtapmethylthioadenosine phosphorylase5103874460103920684Rat
1593242Mettl16methyltransferase 16, RNA N6-adenosine105964091559697291Rat

RefSeq Transcripts XR_085570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CR937047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 164 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)568984307104251008Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)597059760147465714Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
61380Edpm5Estrogen-dependent pituitary mass QTL 54.50.92pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)568984307104251008Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)579584860124584860Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat

1 to 10 of 164 rows


Database
Acc Id
Source(s)
NCBI Gene 100362816 UniSTS
  100365303 UniSTS
  298227 UniSTS
  360568 UniSTS